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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11532#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3222 fasta sequence
[GGGAGATGAGAGAGGAGACTTGTTGATCCAAATGGCGCCCTCGTTGTTGTCTTCCCAACTCCAACTGCACGCCGACGACGTCGCACCCCGCACGAACTAGACAAACACCCACACCATAATCCAAAACCAAAACCTCCTCGCCACATATAAATCCCCATTTGCGCGCGGCCGCCTCGCCGGAGGGGAGGGTGTCGCAATGCCGGAGGCTGCGGCGGCGGCGGCGGGCCACATGGATCCGGTTGGCGACGAGGCGGCGGAGAGGAGGGAGATGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGTAGGAGGATGAGGAGTTCTACGAGTCGCTGGATCGGATCCTGTCGTCGTCGTGCTCGTCCACGTCCGCCTCCGACGACGACGACCAGCAGCACCGGCGGAGGCGGCGGCACCACCCGCAGCCGCAGCAGCTGTCGTCGTCCGCGACGTTCTCCGCGTACGAGGTCTGGATCTCCGAGCCGACATCCGTCGAGGAGCGCCGCCGCGTGCTGCTGCGTCGGCTCGGCCTCGCCCACGACTCCGAGCCCCTGCCGCACCCGTCCCCACGCGTATCATCCTCCTCCCCTCGTTCGCCGACCCCTTCCCCCCCGTCCTCGTCGCCGCCTCGGCCGGCTCCCGTGGTGGCCGCCGCGGAGGAGCCCAGATCCAGCGGCCACGGGAAGCCGCCGCTTGCGAGGAACCCGAGCGGCGGCGCGGAGCAATGCCGGATCCGGAACCTGGACGACGGTACGGAGTTCGAGGTCGGGGAGGTTCACGATGAGGTGGTCCGGGAGGTCGGCACTGGCCGGCAGCTCACCTTCGAGGAGTTCGAGCTCTGCATTGGCCGCTCCCCGATCGTCCAAGAGCTCATGCGCCGGGCCACCACAGCCGCATCATCCTCCACCTCCGACCACGCCGCCCCAGCATCCAAGCCACGGAGGAAGCCTGGAGGCTGGCTGCGTGGCATCCGGCACCTGGCGGGAAGCGTTGCATACGGGCGCAGCAGCACCGATGAGAGGGACAAGGAGAAGGAGAAGGAGAAGAAGGAGAGGGAAGCGCGGCGCCTGAGCTCCGCCACCGATGACAGCCTTGACGGCAACGGCTCGCGCAATGCAGGGAGGGTCAGGGTGCGGCAGTATGGGAAGGCGTGCAAGGAGCTCACCGGGCTGTTCATGACACAAGAATTGGCTGCCCATTCGGGCTCAATCTGGTGTATCAACTTCAGCTTGGATGGACGATACCTTGCAAGCGCTGGCGAGGACCGTGTCATCCATGTGTGGGAGGTATCAGAGGGAGAAAGAAAGGGAGAATTGCTCGGGGAAGGTACGGTGGCAAGGGAGAACGGTGGTGGCTGCAGCCCGTTTCTTGCAGCTGTTGGGAATGGATCGCCGGAGCTGGCAACATTGTCATTGAGCTGTGCTGACGGGGGTTTTGTGGAGAAGAAGAGGAGGCCAAGGATGCAAAGCAGCCGGAAGTCTGTTGGCTCTGATCATCTAGTTGTGCCTGAATGTGTGTTTGGGTTCAGAGATAAACCAGTATGCTCTCTATTGGGTCACGCCGCCGATGTTCTTGATCTATCATGGTCCAAATCTCAGTACTTGCTTTCATCCTCAATGGACAAAACTGTTAAACTATGGGACATTACTACTAGTACCTGTCTGAAAACATTTTCACACACAGACTATGTGACTTGCATCCAGTTCAATCCCGTGGATGATAACTTCTTCATTAGTGGATCACTGGATGAAAAAGTACGCATTTGGAATGTACATGATCGTAAGATTGAGGATTGGAATGATCTTCATGAGATGGTCACTGCTGCGTGTTACTCCCCTGATGGACAGGTTGCACTGGTGGGATCACACAAGGGAAGCTGTCATTTATTTGATACAACTGAAAAGAAGCTTCAGTACAAAAGTCAGATAGAACTAAGAATCAGGAAGAAGAAGTCTGGCCAGAAGAAGATAACTGGCTTCCAGTTTGCTCCTGGAAGCTCGTCGGAAGTCCTGATTACCTCTGCAGATTCAAGAATCCGTGTTGTTAATGGTGATGAACTCGTTCACAAATTTAAAGGGTTCCGAAATACAAGTAGCCAAATATCCGCTTCTGTAGCTCCAAACGGGAAATATGTGGTCTGTGCCAGTGAGGACTCCCACGTGTATGTCTGGAGGCATGACAATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTTGATGTAACCAACTCATATGAGCATTTCCATTGCCATGATGTCACTGTGGCTATCACATGGCCCGGCGCTGAATCCCGTGGCTCATTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGACGATGCAGTGATGAACACGGGTCGGGATGCCCCTGTAGAGAACAGTGAGCATGATCTGAATGGCACTGTCAATAGATGCACCAAGCGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCAATCCTCCAGCGGATGGAGTATCAACGTCCTGGCCTGACGAGAAACAATCGTCTGCCAAGAGCAGTCCTGGTCACTGCTCATCCGACCTTTGCATTGGAGCTTTGGATGTTCAGCGCCGGTCAGCTTGGGGATTGGTGATTGTCACTGCAGGAAGGGGTGGTGAAATTAGGGTGTTCCAGAATTTCGGCTTCCCGGTTCAAGTGTAAAGCTAGTGTGAGAATATTCAGAGATGTCCGTTTGTTTACTGTATAGATATCGTTAGTTTTTTCTCCATTTCACCTAGTTCTTTTACTAGCTAAAAGATTTCCCTGTTTCGCTGTCAGGTTGGGAGCCCCAGTAGCTCAATCCAACTTGCTAAGCACCACACTATTTTTTACCCTCTGTTGATACAAGGCTTTGTGTAATTGTATGGTTAACAACCAATACATCGATTTGTTTGTTCATATATTGTTTCTTGGTTATACACTGATTGATATATGAAGATAATTTCTAACTCCATGATAATCCATTGTGCAATCTTCCCTCCCAGTATGGCTTTTATTGAACTACACTGTTCAGCATTCTACAGTTCATTTAATTACTAGGAGCACATGCTAGAATCTTGATGGCAACAAACTCTTATTATTGNCATTAACACTGCACATACGTAAACACATCTTCCAGCTACAGATCACGATTCACTGATCCCAATGATAATCACCACATCATTGTGCAAGCGTATGAAATTGGTGAGAGAAGAAAACTGCATACCGATCGAAGAACGCACTACTTG]
[+] EMBL AK102779 [GGGAGATGAGAGAGGAGACTTGTTGATCCAAATGGCGCCCTCGTTGTTGTCTTCCCAACTCCAACTGCACGCCGACGACGTCGCACCCCGCACGAACTAGACAAACACCCACACCATAATCCAAAACCAAAACCTCCTCGCCACATATAAATCCCCATTTGCGCGCGGCCGCCTCGCCGGAGGGGAGGGTGTCGCAATGCCGGAGGCTGCGGCGGCGGCGGCGGGCCACATGGATCCGGTTGGCGACGAGGCGGCGGAGAGGAGGGAGATGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGTAGGAGGATGAGGAGTTCTACGAGTCGCTGGATCGGATCCTGTCGTCGTCGTGCTCGTCCACGTCCGCCTCCGACGACGACGACCAGCAGCACCGGCGGAGGCGGCGGCACCACCCGCAGCCGCAGCAGCTGTCGTCGTCCGCGACGTTCTCCGCGTACGAGGTCTGGATCTCCGAGCCGACATCCGTCGAGGAGCGCCGCCGCGTGCTGCTGCGTCGGCTCGGCCTCGCCCACGACTCCGAGCCCCTGCCGCACCCGTCCCCACGCGTATCATCCTCCTCCCCTCGTTCGCCGACCCCTTCCCCCCCGTCCTCGTCGCCGCCTCGGCCGGCTCCCGTGGTGGCCGCCGCGGAGGAGCCCAGATCCAGCGGCCACGGGAAGCCGCCGCTTGCGAGGAACCCGAGCGGCGGCGCGGAGCAATGCCGGATCCGGAACCTGGACGACGGTACGGAGTTCGAGGTCGGGGAGGTTCACGATGAGGTGGTCCGGGAGGTCGGCACTGGCCGGCAGCTCACCTTCGAGGAGTTCGAGCTCTGCATTGGCCGCTCCCCGATCGTCCAAGAGCTCATGCGCCGGGCCACCACAGCCGCATCATCCTCCACCTCCGACCACGCCGCCCCAGCATCCAAGCCACGGAGGAAGCCTGGAGGCTGGCTGCGTGGCATCCGGCACCTGGCGGGAAGCGTTGCATACGGGCGCAGCAGCACCGATGAGAGGGACAAGGAGAAGGAGAAGGAGAAGAAGGAGAGGGAAGCGCGGCGCCTGAGCTCCGCCACCGATGACAGCCTTGACGGCAACGGCTCGCGCAATGCAGGGAGGGTCAGGGTGCGGCAGTATGGGAAGGCGTGCAAGGAGCTCACCGGGCTGTTCATGACACAAGAATTGGCTGCCCATTCGGGCTCAATCTGGTGTATCAACTTCAGCTTGGATGGACGATACCTTGCAAGCGCTGGCGAGGACCGTGTCATCCATGTGTGGGAGGTATCAGAGGGAGAAAGAAAGGGAGAATTGCTCGGGGAAGGTACGGTGGCAAGGGAGAACGGTGGTGGCTGCAGCCCGTTTCTTGCAGCTGTTGGGAATGGATCGCCGGAGCTGGCAACATTGTCATTGAGCTGTGCTGACGGGGGTTTTGTGGAGAAGAAGAGGAGGCCAAGGATGCAAAGCAGCCGGAAGTCTGTTGGCTCTGATCATCTAGTTGTGCCTGAATGTGTGTTTGGGTTCAGAGATAAACCAGTATGCTCTCTATTGGGTCACGCCGCCGATGTTCTTGATCTATCATGGTCCAAATCTCAGTACTTGCTTTCATCCTCAATGGACAAAACTGTTAAACTATGGGACATTACTACTAGTACCTGTCTGAAAACATTTTCACACACAGACTATGTGACTTGCATCCAGTTCAATCCCGTGGATGATAACTTCTTCATTAGTGGATCACTGGATGAAAAAGTACGCATTTGGAATGTACATGATCGTAAGATTGAGGATTGGAATGATCTTCATGAGATGGTCACTGCTGCGTGTTACTCCCCTGATGGACAGGTTGCACTGGTGGGATCACACAAGGGAAGCTGTCATTTATTTGATACAACTGAAAAGAAGCTTCAGTACAAAAGTCAGATAGAACTAAGAATCAGGAAGAAGAAGTCTGGCCAGAAGAAGATAACTGGCTTCCAGTTTGCTCCTGGAAGCTCGTCGGAAGTCCTGATTACCTCTGCAGATTCAAGAATCCGTGTTGTTAATGGTGATGAACTCGTTCACAAATTTAAAGGGTTCCGAAATACAAGTAGCCAAATATCCGCTTCTGTAGCTCCAAACGGGAAATATGTGGTCTGTGCCAGTGAGGACTCCCACGTGTATGTCTGGAGGCATGACAATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTTGATGTAACCAACTCATATGAGCATTTCCATTGCCATGATGTCACTGTGGCTATCACATGGCCCGGCGCTGAATCCCGTGGCTCATTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGACGATGCAGTGATGAACACGGGTCGGGATGCCCCTGTAGAGAACAGTGAGCATGATCTGAATGGCACTGTCAATAGATGCACCAAGCGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCAATCCTCCAGCGGATGGAGTATCAACGTCCTGGCCTGACGAGAAACAATCGTCTGCCAAGAGCAGTCCTGGTCACTGCTCATCCGACCTTTGCATTGGAGCTTTGGATGTTCAGCGCCGGTCAGCTTGGGGATTGGTGATTGTCACTGCAGGAAGGGGTGGTGAAATTAGGGTGTTCCAGAATTTCGGCTTCCCGGTTCAAGTGTAAAGCTAGTGTGAGAATATTCAGAGATGTCCGTTTGTTTACTGTATAGATATCGTTAGTTTTTTCTCCATTTCACCTAGTTCTTTTACTAGCTAAAAGATTTCCCTGTTTCGCTGTCAGGTTGGGAGCCCCAGTAGCTCAATCCAACTTGCTAAGCACCACACTATTTTTTACCCTCTGTTGATACAAGGCTTTGTGTAATTGTATGGTTAACAACCAATACATCGATTTGTTTGTTCATATATTGTTTCTTGGTTATACACTGATTGATATATGAAGATAA ]
[-] EMBL AU081008 [ tttttttTTGTATGGTTAACAACCAATACATCGATTTGTTTGTTCATATATTGNTTCTTGGTTATACACTGATTGATATATGAAGATAATTTCTAACTCCATGATAATCCATTGTGCAATCTTCCCTCCCAGTATGGCTTTTATTGAACTACACTGTTCAGCATTCTACAGTTCATTTAATTACTAGGAGCACATGCTAGAATCTTGATGGCAACAAACTCTTATTATTGNCATTAACACTGCACATACGTAAACACATCTTCCAGCTACAGATCACGATTCACTGATCCCAATGATAATCACCACATCATTGTGCAAGCGTATGAAATTGGTGAGAGAAGAAAACTGCATACCGATCGAAGAACGCACTACTTG]
consensusID : consensus_11532#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1082 fasta sequence
[GGGCACAAACTCTTATTATTGTCATTAACACTG-ACATACGTAAACACATCTTCCAGCTACAGATCACGATTCACTGATCCCAATGATAATCACCA-ATCA-TTGTG-CAAGC-GT-ATGCAATTTTTGAGAGAAGAAAACTGCAAACACCACGTTGGATAATTGA-GCTGCTTAATTACATTCCCAATAATTATATCATAATCCCTAGCTCAGCAAAATATACTTCATACCGATCGAAGAACACACTACCTGCATACCGATCGAAGAACGCACTACTTGAGGCTGCTTTGCTAAAACCGGAGCCCCCCAAAACACGAGCGACCAGCTGTGTACTGTTCGTCAGTTACCCGGCGGCGGCCAGCTGAGATCAAGGCCGGCGATGTCGGCGAAGTTGTCCCACGCCGCGCCGGTGACCGCCGTTCCATCGTCCCACGGCGCGATCCCGCAGTTGTACAAGTCAGGGACAGCCGATGCCCAAGAGAACGCGGCCGGCGCAACGCCGGCGAGGCCGAACTGCGGCAGGAAGGCGCCGTCACTGAGGAACGGGAAGCCGGCTGGGAGGTCGGCGTACGCGTCCGTGGTGGAAGTCGTGGGTGGCGGCGGCGACGCCGAGGAAGGGTCGGCGTCGGCGGAGACCCTGCGGCG--CTTGC-CGCCGCCGCCGCGGCGAGAGGCGCCGCCCACCGGCACGTCGCGGAGCGTGCCCCCGTGCGTCCAGTAGCGGCGGCAGGCGCGGCAGAAGTGGCGCGGCTGCGACGTGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTTGGTGGATCGGCAGCGCGGGCACTCCAGCTGCTGCTGCTTCTTCTCCTGCTGCCCCGTGCGATCTCCCTGGTGCGGCGGCGAGGCGTCGGAATCGGCCGGGCGCTTGTTGGAGGCGGTGGCGGCGGCGGCGGAGAGCACGAGTGACGGGGAGGAGGCAACCGCAGGAGCCATTTGGTCGGTTGCAGCAGCAGAAGGGCATGCCGCGCGCGGTCAGACTGCTGGCCTTAATAACCTCGCGCTATCTACAATCTCTGCCGCTTAATCTGCAGTTTCTGTGGGCGCGTGATCTCGATCGTCTC]
[-] EMBL BI811064 [GGGCACAAACTCTTATTATTGTCATTAACACTG ACATACGTAAACACATCTTCCAGCTACAGATCACGATTCACTGATCCCAATGATAATCACCA ATCATTTGTGCCAAGCTGTCATGCAACATTTG ]
[-] EMBL AK107524 [ AACTCTTATTATTGTCATTAACACTGCACATACGTAAACACATCTTCCAGCTACAGATCACGATTCACTGATCCCAATGATAATCACCACATCA TTGTG CAAGC GT ATGAAATTGGTGAGAGAAGAAAACTGCAAACACCACGTTGGATAATTGA GCTGCTTAATTACATTCCCAATAATTATATCATAATCCCTAGCTCAGCAAAATATACTTCATACCGATCGAAGAACACACTACCTGCATACCGATCGAAGAACGCACTACTTGAGGCTGCTTTGCTAAAACCGGAGCCCCCCAAAACACGAGCGACCAGCTGTGTACTGTTCGTCAGTTACCCGGCGGCGGCCAGCTGAGATCAAGGCCGGCGATGTCGGCGAAGTTGTCCCACGCCGCGCCGGTGACCGCCGTTCCATCGTCCCACGGCGCGATCCCGCAGTTGTACAAGTCAGGGACAGCCGATGCCCAAGAGAACGCGGCCGGCGCAACGCCGGCGAGGCCGAACTGCGGCAGGAAGGCGCCGTCACTGAGGAACGGGAAGCCGGCTGGGAGGTCGGCGTACGCGTCCGTGGTGGAAGTCGTGGGTGGCGGCGGCGACGCCGAGGAAGGGTCGGCGTCGGCGGAGACCCTGCGGCG CTTGC CGCCGCCGCCGCGGCGAGAGGCGCCGCCCACCGGCACGTCGCGGAGCGTGCCCCCGTGCGTCCAGTAGCGGCGGCAGGCGCGGCAGAAGTGGCGCGGCTGCGACGTGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTTGGTGGATCGGCAGCGCGGGCACTCCAGCTGCTGCTGCTTCTTCTCCTGCTGCCCCGTGCGATCTCCCTGGTGCGGCGGCGAGGCGTCGGAATCGGCCGGGCGCTTGTTGTAGGCGGTGGCGGCGGCGGCGGAGAGCACGAGTGACGGGGAGGAGGCAACCGCAGGAGCCATTTGGTCGGTTGCAGCAGCAGAAGGGCATGCCGCGCGCGGTCAGACTGCTGGCCTTAATAACCTCGCGCTATCTACAATCTCTGCCGCTTAATCTGCAGTTTCTGTGGGCGCGTGATCTCGATCGTCTC]
[-] EMBL BI801018 [ tttttTTTTTGAGAGAAGAAAACTG AAACACCACATGGGATAATTGACGCTGCTTAATTACATTCCCAATAATTATATCATAATCCCTAGCTCAGCAAAATATACTTCATACCGATCGAAGAACACACTACCTGCATACCGATCGAAGAACGCACTACTTGAGGCTGCTTGGCTAAAACCGGAGCCCCCCAAAACACGAGCGACCAGCTGTGTAC G TCGTCAGTTACCCGG GGCGGCCAGCTGAGATCAAGGCCGGCGATGTCGGCGAAG TGTCCCACGCCGCGCCGGTGACCGCCG TCCATCGTCCCACGGCGCGATCCCGCAGTTGTACAAGTCAGGGACAGCCGATGCCCAAGAGAACGCGG CGGCGCAACGCCGGCGAGGCCGAACTGCGGCAGGAAGGCGCCGTCACTGAGGAACGGGAAGCCGGCTGGGAGGTCGGCGTACGCGTCCGTGGTGGAAGTCGTGGGTGGCGGCGGCGACGCCGAGGAAGGGTCGG GTCGGGGGAGACCCTGCGGAGGCCTTGCGCGCg ]
[-] EMBL BP184881 [ ACGAGCGACCAGCTGTGTACTGTTCGTCAGTTACCCGGCGGCGGCCAGCTGAGATCAAGGCCGGCGATGTCGGCGAAGTTGTCCCACGCCGCGCCGGTGACCGCCGTTCCATCGTCCCACGGCGCGATCCCGCAGTTGTACAAGTCAGGGACAGCCGATGCCCAAGAGAACGCGGCCGGCGCAACGCCGGCGAGGCCGAACTGCGGCAGGAAGGCGCCGTCACTGAGGAACGGGAAGCCGGCTGGGAGGTCGGCGTACGCGTCCGTGGTGGAAGTCGTGGGTGGCGGCGGCGACGCCGAGGAAGGGTCGGCGTCGGCGGAGACCCTGCGGCG CTTGC CGCCGCCGCCGCGGCGAGAGGCGCCGCCCACCGGCACGTCGCGGAGCGTGCCCCCGTGCGTCCAGTAGCGGCGGCAGGCGCGGCAGAAGTGGCGCGGCTGCGACGTGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTTGGTGGATCGGCAGCGCGGGCACTCCAGCTGCTGCTGCTTCTTCTCCTGCTGCCCCGTGCGATCTCCCTGGTGCGGCGGCGAGGCGTCGGAATCGGCCGGGCGCTTGTTGGAGGCGGTGGCGGCGGCGGCGGAGAGCACGAGTGACGGGGAGGAGGCAACCGCAGGAGCCtcgt ]
[-] EMBL AU081007 [ GTCGGCGT CGCGTCCGT GT GAATTCGT GGTTGC GCGGCNAC CCGA GAAAGGTCGGCGTCGNCGAAGACCTTCCGGCG CTTCC NGCCGCCGCCGCGGC AAAAGCGCCGCCCA CGGCACGTCNCGAAGCGTGCCCCCGTGCGTCCAGTAGCGNCGGCAGGCGCGGCAGAAGTGGCGCGGCTGCGACGTGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTTGGTGGATCGGCAGCGCGGGCACTCCAGCTGCTGCTGCTTCTTCTCCTGCTGCCCCGTGCGATCTCCCTGGTGCGGCGGCGAGGCGTCGGAATCGGCCGGGCGCTTGTTGGAGGCGGTGGCGGCGGCGGCGGAGAGCACGAGTGACGGGGAGGAGGCAACCGCAGG ]
[-] EMBL AU069306 [ CGCGGCTGCNACGTGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTTGGTGGATCGGCAGCGCGGGAACTCCAGCTGCTGCTGCTTCTTCTCCTGCTGCCCCGTGCGATCTCCCTGGTGCGGCGGCGAGNCGTCGGAATCGGCCGGGCGCTTGTTGGAGGCGGTGGCGGCGGCGGCGGAGAGCACGAGTGACGGGGAGGAGGCAACC ]
consensusID : consensus_11532#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 658 fasta sequence
[TTTTTTTTTATACTGTTTCACTTACATTTTATTTGATCTTTTCACCAGGGTTCCGAAATACAAGTAGCCAAATATCCGCTTCTGTAGCTCCAAACGGGAAATATGTGGTCTGTGCCAGTGAGGACTCCCACGTGTATGTCTGGAGGCATGACAATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTTGATGTAACCAACTCATATGAGCATTTCCATTGCCATGATGTCACTGTGGCTATCACATGGCCCGGCGCTGAATCCCGTGGCTCATTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGACGATGCAGTGATGAACACGGGTCGGGATGCCCCTGTAGAGAACAGTGAGCATGATCTGAATGGCACTGTCAATAGATGCACCAAGCGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCAATCCTCCAGCGGATGGAGTATCAACGTCCTGGCCTGACGAGAAACAATCGTCTGCCAAGAGCAGTCCTGGTCACTGCTCATCCGACCTTTGCATTGGAGCTTTGGATGTTCAGCGCCGGTCAGCTTGGGGATTGGTGATTGTCACTGCATACCGATCGAAGAACGCACTACTTGAGGCTGCTTTGCTAAAACCGGAGCCCCCCAAAACACGAGCGACCAGCTGTGTACTGTT]
[-] EMBL CF303208 [TTTTTTTTTATACTGTTTCACTTACATTTTATTTGATCTTTTCACCAGGGTTCCGAAATACAAGTAGCCAAATATCCGCTTCTGTAGCTCCAAACGGGAAATATGTGGTCTGTGCCAGTGAGGACTCCCACGTGTATGTCTGGAGGCATGACAATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTTGATGTAACCAACTCATATGAGCATTTCCATTGCCATGATGTCACTGTGGCTATCACATGGCCCGGCGCTGAATCCCGTGGCTCATTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGACGATGCAGTGATGAACACGGGTCGGGATGCCCCTGTAGAGAACAGTGAGCATGATCTGAATGGCACTGTCAATAGATGCACCAAGCGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCAATCCTCCAGCGGATGGAGTATCAACGTCCTGGCCTGACGAGAAACAATCGTCTGCCAAGAGCAGTCCTGGTCACTGCTCATCCGACCTTTGCATTGGAGCTTTGGATGTTCAGCGCCGGTCAGCTTGGGGATTGGTGATTGTCACTGCATACCGATCGAAGAACGCACTACTTGAGGCTGCTTTGCTAAAACCGGAGCCCCCCAAAACACGAGCGACCAGCTGTGTACTGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11532#0 GGGAGATGAGAGAGGAGACTTGTTGATCCAAATGGCGCCCTCGTTGTTGTCTTCCCAACT 60
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CCAACTGCACGCCGACGACGTCGCACCCCGCACGAACTAGACAAACACCCACACCATAAT 120
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CCAAAACCAAAACCTCCTCGCCACATATAAATCCCCATTTGCGCGCGGCCGCCTCGCCGG 180
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 AGGGGAGGGTGTCGCAATGCCGGAGGCTGCGGCGGCGGCGGCGGGCCACATGGATCCGGT 240
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 TGGCGACGAGGCGGCGGAGAGGAGGGAGATGGAGGAGAAGGAGGAGGAGGAGGAGGAGGA 300
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GTAGGAGGATGAGGAGTTCTACGAGTCGCTGGATCGGATCCTGTCGTCGTCGTGCTCGTC 360
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CACGTCCGCCTCCGACGACGACGACCAGCAGCACCGGCGGAGGCGGCGGCACCACCCGCA 420
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GCCGCAGCAGCTGTCGTCGTCCGCGACGTTCTCCGCGTACGAGGTCTGGATCTCCGAGCC 480
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GACATCCGTCGAGGAGCGCCGCCGCGTGCTGCTGCGTCGGCTCGGCCTCGCCCACGACTC 540
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CGAGCCCCTGCCGCACCCGTCCCCACGCGTATCATCCTCCTCCCCTCGTTCGCCGACCCC 600
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 TTCCCCCCCGTCCTCGTCGCCGCCTCGGCCGGCTCCCGTGGTGGCCGCCGCGGAGGAGCC 660
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CAGATCCAGCGGCCACGGGAAGCCGCCGCTTGCGAGGAACCCGAGCGGCGGCGCGGAGCA 720
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 ATGCCGGATCCGGAACCTGGACGACGGTACGGAGTTCGAGGTCGGGGAGGTTCACGATGA 780
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GGTGGTCCGGGAGGTCGGCACTGGCCGGCAGCTCACCTTCGAGGAGTTCGAGCTCTGCAT 840
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 TGGCCGCTCCCCGATCGTCCAAGAGCTCATGCGCCGGGCCACCACAGCCGCATCATCCTC 900
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CACCTCCGACCACGCCGCCCCAGCATCCAAGCCACGGAGGAAGCCTGGAGGCTGGCTGCG 960
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 TGGCATCCGGCACCTGGCGGGAAGCGTTGCATACGGGCGCAGCAGCACCGATGAGAGGGA 1020
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CAAGGAGAAGGAGAAGGAGAAGAAGGAGAGGGAAGCGCGGCGCCTGAGCTCCGCCACCGA 1080
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 TGACAGCCTTGACGGCAACGGCTCGCGCAATGCAGGGAGGGTCAGGGTGCGGCAGTATGG 1140
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GAAGGCGTGCAAGGAGCTCACCGGGCTGTTCATGACACAAGAATTGGCTGCCCATTCGGG 1200
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CTCAATCTGGTGTATCAACTTCAGCTTGGATGGACGATACCTTGCAAGCGCTGGCGAGGA 1260
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CCGTGTCATCCATGTGTGGGAGGTATCAGAGGGAGAAAGAAAGGGAGAATTGCTCGGGGA 1320
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 AGGTACGGTGGCAAGGGAGAACGGTGGTGGCTGCAGCCCGTTTCTTGCAGCTGTTGGGAA 1380
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 TGGATCGCCGGAGCTGGCAACATTGTCATTGAGCTGTGCTGACGGGGGTTTTGTGGAGAA 1440
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GAAGAGGAGGCCAAGGATGCAAAGCAGCCGGAAGTCTGTTGGCTCTGATCATCTAGTTGT 1500
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GCCTGAATGTGTGTTTGGGTTCAGAGATAAACCAGTATGCTCTCTATTGGGTCACGCCGC 1560
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CGATGTTCTTGATCTATCATGGTCCAAATCTCAGTACTTGCTTTCATCCTCAATGGACAA 1620
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 AACTGTTAAACTATGGGACATTACTACTAGTACCTGTCTGAAAACATTTTCACACACAGA 1680
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CTATGTGACTTGCATCCAGTTCAATCCCGTGGATGATAACTTCTTCATTAGTGGATCACT 1740
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GGATGAAAAAGTACGCATTTGGAATGTACATGATCGTAAGATTGAGGATTGGAATGATCT 1800
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 -----------------------GGGCACAAACTCTTATTATTGTCATTAACACTGACAT 37
consensus_11532#0 TCATGAGATGGTCACTGCTGCGTGTTACTCCCCTGATGGACAGGTTGCACTGGTGGGATC 1860
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ACGTAAACACATC----TTCCAGCTACAGATCACGATTCACTGATCCCAATGATAATCAC 93
consensus_11532#0 ACACAAGGGAAGCTGTCATTTATTTGATACAACTGAAAAGAAGCTTCAGTACAAAAGTCA 1920
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 CAATCATTGT-GCAAGCGTATGCAATTTTTGAGAGAAGAAAACTGCAAACACCAC-GTTG 151
consensus_11532#0 GATAGAACTAAGAATCAGGAAGAAGAAGTCTGGCCAGAAGAAGATAACTGGCTTCCAGTT 1980
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 GATAATTGAGCTGCTTAATTACATTCCCAATAATTATATCATAATCCCTAGCTCAGCAAA 211
consensus_11532#0 TGCTCCTGGAAGCTCGTCGGAAGTCCTGATTACC-TCTGCAGATTCAAGAATCCGTGTTG 2039
consensus_11532#2 --------------------------TTTTTTTT-TATACTGTTTCACT--TACATTTTA 31
consensus_11532#1 ATATACTTCATACCGATCGAAGAACACACTACCTGCATACCGATCGAAGA--ACGCACTA 269
* * * * * * * *
consensus_11532#0 TTAATGGTGATGAACTCGTTCACAAATTTAAAGGGTTCCGAAATACAAGTAGCCAAATAT 2099
consensus_11532#2 TT--------TGATCTT-TTCACCA-------GGGTTCCGAAATACAAGTAGCCAAATAT 75
consensus_11532#1 CTTG------AGGCTGCTTTGCTAAAACCGGAGCCCCCCAAAACACGAGCGACCAGCTGT 323
* * ** * * ** *** ** ** *** * *
consensus_11532#0 CCGCT--TCTGTAGCT-CCAAACGGGAAATA--TGTGGTCTGTGCCAGTGAGGACTCCCA 2154
consensus_11532#2 CCGCT--TCTGTAGCT-CCAAACGGGAAATA--TGTGGTCTGTGCCAGTGAGGACTCCCA 130
consensus_11532#1 GTACTGTTCGTCAGTTACCCGGCGGCGGCCAGCTGAGATCAAGGCCGGCGATGTCGGCGA 383
** ** ** * ** *** * ** * ** *** * ** * * * *
consensus_11532#0 CGTGTATGTCTGGAGGCATGACAATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTTGA 2214
consensus_11532#2 CGTGTATGTCTGGAGGCATGACAATACTTCCCATCCGAGCAGAAGCAGGAGTGCAGTTGA 190
consensus_11532#1 AGT---TGTCCCACGCCGCGCCGGTGACCGCCGTTCCATCGTC--CCACGGCGCGATCC- 437
** **** * * * * * ** * * * * * * ** *
consensus_11532#0 TGTAACCAACTCATATGAGCATTTCCATTGCCATGATGTCACTGTGGCTATCACATGGCC 2274
consensus_11532#2 TGTAACCAACTCATATGAGCATTTCCATTGCCATGATGTCACTGTGGCTATCACATGGCC 250
consensus_11532#1 CGCAGTTGTACAAGTCAGGGACAGCCGATGCC--CAAGAGAACGCGGCCGGCGCAACGCC 495
* * * * * ** **** * * * * *** * ** ***
consensus_11532#0 --CGGCGCTGAATCCCGTGGCTCATTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGAC 2332
consensus_11532#2 --CGGCGCTGAATCCCGTGGCTCATTCGGGTCCCGTAGCAGCAGAAACAGTGATTCAGAC 308
consensus_11532#1 GGCGAGGCCGAA--CTGCGGC--AGGAAGGCGCCGTCACTG-AGGAACGGGAAGCCGGCT 550
** ** *** * * *** * ** **** * * ** *** * * * *
consensus_11532#0 GATGCAGTGATGAACACGGGTCGGGATGCCCCTGTAGAGAACAGTGAGCATGATCTGAAT 2392
consensus_11532#2 GATGCAGTGATGAACACGGGTCGGGATGCCCCTGTAGAGAACAGTGAGCATGATCTGAAT 368
consensus_11532#1 GGGAGGTCGGCGTACGCGTCCGTGGTGGAAGTCGTGGGTGGCGGCGGCGACGCCGAGGAA 610
* * * ** ** ** * ** * * * * * * * *
consensus_11532#0 GG--CACTGTCAATAGATGCACCAAGCGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCA 2450
consensus_11532#2 GG--CACTGTCAATAGATGCACCAAGCGCCCAGTTTGTGAAGGTGTTGCAAGCACAAGCA 426
consensus_11532#1 GGGTCGGCGTCGGCGGAGACCCTGCGGCGCTTGCCGCCGCCGCCGCGGCGAG-AGGCGCC 669
** * *** ** * * * * * * * * ** ** * **
consensus_11532#0 ATCCTCCAGCGGATGGAGTATCAACGTCCTGGCCTGACGAGAAACAATCGTCTGC-CAAG 2509
consensus_11532#2 ATCCTCCAGCGGATGGAGTATCAACGTCCTGGCCTGACGAGAAACAATCGTCTGC-CAAG 485
consensus_11532#1 GCCCACCGGCACGTCGCGGAGCG-TGCCCCCGTGCGTCCAGTAGCGGCGGCAGGCGCGGC 728
** ** ** * * * * * * ** * * * ** * * * ** *
consensus_11532#0 AGCAGT--CCTGGTCACTGCTCATCCGACCT-TTGCATTGG-AGCTTTGGATGTTCAGCG 2565
consensus_11532#2 AGCAGT--CCTGGTCACTGCTCATCCGACCT-TTGCATTGG-AGCTTTGGATGTTCAGCG 541
consensus_11532#1 AGAAGTGGCGCGGCTGCGACGTGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTTGGTGG 788
** *** * ** * * * * *** * * * ** * * **** *
consensus_11532#0 CCGGTCAGCTTGGGGATTGGTGATTGTCACTGCAGGAAGGGGTGGTGAAA--TTAGGGTG 2623
consensus_11532#2 CCGGTCAGCTTGGGGATTGGTGATTGTCACTGCA--------TACCGATC--GAAGAACG 591
consensus_11532#1 ATCGGCAGCGCGGGCACTC-CAGCTGCTGCTGCTTCTTCTCCTGCTGCCCCGTGCGATCT 847
* **** *** * * ** **** * * *
consensus_11532#0 TTCCAGAATTTCGGCTTCCCGGTTCAAGTG-TAAAGCTAGTGTGAGAATATTCAGAGATG 2682
consensus_11532#2 CACTAC--TTGAGGCTGCTTTGCTAAAAC--CGGAGCC--CCCCAAAACAC----GAGCG 641
consensus_11532#1 CCCTGGTGCGGCGGCGAGGCGTCGGAATCGGCCGGGCGCTTGTTGGAGGCGGTGGCGGCG 907
* *** ** ** * *
consensus_11532#0 TCCGTTTGTTTACTGTATAGATATCGTTAGTTTTTTCTCCATTTCACCTAGTTCTTTTAC 2742
consensus_11532#2 ACCAGCTGTGTACTGTT------------------------------------------- 658
consensus_11532#1 GC-GGCGGAGAGCACGAGTGACGGGGAGGAGGCAACCGCAGGAGCCATTTGGTCGGTTGC 966
* * *
consensus_11532#0 TAGCTAAAAGATTTCCCTGTTTCGCTGTCAGGTTGGGAGCCCCAGTAGCTCAATCCAACT 2802
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 AGCAGCAGAAGGGCATGCCGCGCGCGGTCAGACTGCTGGCCTTAATAACCTCGCGCTATC 1026
consensus_11532#0 TGCTAAGCACCACACT-ATTTTTTACCCTCTGTTGATACAAGGCTTTGTGTAATTGTATG 2861
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 TACAATCTCTGCCGCTTAATCTGCAGTTTCTGTGGGCGCGTGATCTCGATCGTCTC---- 1082
consensus_11532#0 GTTAACAACCAATACATCGATTTGTTTGTTCATATATTGTTTCTTGGTTATACACTGATT 2921
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GATATATGAAGATAATTTCTAACTCCATGATAATCCATTGTGCAATCTTCCCTCCCAGTA 2981
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 TGGCTTTTATTGAACTACACTGTTCAGCATTCTACAGTTCATTTAATTACTAGGAGCACA 3041
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 TGCTAGAATCTTGATGGCAACAAACTCTTATTATTGNCATTAACACTGCACATACGTAAA 3101
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 CACATCTTCCAGCTACAGATCACGATTCACTGATCCCAATGATAATCACCACATCATTGT 3161
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 GCAAGCGTATGAAATTGGTGAGAGAAGAAAACTGCATACCGATCGAAGAACGCACTACTT 3221
consensus_11532#2 ------------------------------------------------------------
consensus_11532#1 ------------------------------------------------------------
consensus_11532#0 G 3222
consensus_11532#2 -
consensus_11532#1 -
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||