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Oryza sativa
cluster # 11543 cluster # 11543       Sequences # 9       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11543#0 length = 1487 sequences # 9  
consensusID : consensus_11543#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1487
fasta sequence 
                              [CTTCGTCTCCTCCTCTCCACCACTCGTCGTCGTCGGCGGCGTGGCCATGGCGACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCAGCTCCCGCTCCCACGGCGCGCAGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGGCGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTTAGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCCCGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCTCTGCCGAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATCCAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGA-CTAGATCTTGTATTGTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAGTTGTTCGGGACTGCTCTAGACTCGATTGAGACTGCAACTATCAGTTCCCTGGATGAGGTATCTACCGGACCTGTTAATACCTTCTTCAGATCAATGAGAGATACCCTGGATTTTGACTTTGCTGACGATGTTGAAGATCGATGGAAATCTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTTTCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAG-CCCTTCTCTTTAATCTTGAACTAGATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTGCATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCTAAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC-TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA-ACA-AGGAAGCTCACTAGAATTTCTC-AGAAGAGGATA-CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA-GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG-CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA-CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA-GGCGACAAGGATGCAAATTGC-CTGTGCTGCA-ATTGTACATTTTGTGATTGTAACA-TGTTACTGTGTGAGTAA-CA-GGCA-TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGAAATTCGTGTTCATCCAAAAAAAAAAGGGG]

[+] EMBL AK064929             [CTTCGTCTCCTCCTCTCCACCACTCATCGTCGTCGGCGGCGTGGCCATGGCGACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCCGCTCCCGCTCCCGCGGCGCGCAGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGGCGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTTAGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCCCGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCTCTGCCGAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATCCAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGACCTAGATCTCGTATTGTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAGTTGTTCGGGACTGCTCTAGACTCGATTGAGACTGCAACTATCAGTTCCCTGGATGAGGTATCTACCGGACCTGTTAATACCTTCTTCAGATCAATGAGAGATACCCTGGATTTTGACTTTGCTGACGATGTTGAAGATCGATGGAAATCTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTTTCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAG CCCTTCTCTTTAATCTTGAACTAGATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTGCATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCTAAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAGTAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGAAATTC                        ]
[+] EMBL CB626005             [         CTCCTCTCCACCACTCGTCGTCGTCGGCGGCGTGGCCATGGCGACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCAGCTCCCGCTCCCACGGCGCGCAGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGGCGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTTAGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCCCGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCTCTGCCGAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATCCAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGA CTAGATCTTGTATTGTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAGTTGTTCGGGACTGCTCTAGACTCGATTGAGACTGCAACTATCAGTTCCCTGGATGAGGTATCTACCGGACCTGTTAATACCTTCTTCAGATCAATGAGAGATACCCTGGATTTTGACTTTGCTGACGATGTTGAAGATCGATGGAAATCTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTTTCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAGCCCCTTCTCTTTAATCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB624013             [         CTCCTCTCCACCACTCGTCGTCGTCGGCGGCGTGGCCATGGCGACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCAGCTCCCGCTCCCACGGCGCGCAGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGGCGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTTAGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCCCGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCTCTGCCAAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATCCAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGA CTAGATCTTGAATTGTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAATTGATCGGGACTGCTCTAGACTCGATTGAGACTGCAACTATCAACTCCCTGGATGAGGTATCTACCGGACCTGCTAATACCTTCTTCGGATCAATGAGAGATACCCTGGATTTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB624014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTTTCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAG CCCTTCTCTTTAATCTTGAACTAGATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTGCATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCTAAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAATAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGAAATTCG                       ]
[-] EMBL CB679293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTGCATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCTAAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGACCAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAGTAC CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTGGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCGCATTTTAAATGGAAATTCGTGTTCATCCAAAAAAAAAAGGGG]
[-] EMBL CK085357             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAGTAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGAAATTCGTGTTCATCCAAAA          ]
[-] EMBL CK085348             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGCACTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGATTAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGATTATGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGTAATTCGTGTTTATCCAAAA          ]
[-] EMBL CA758231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAATAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAAT                                ]
[+] EMBL BM422018             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGCCAGTCATGCTTTAAGCAACCCGATGGTTC TAAGCATGTGTTCCAGAGAGTCCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGATACACAGGAAGCTCACTAGAATTTCTCTAGAAGAGGATACCNAGAATGCTACTTGGTGGGAAGAGAATGTTGATCACGGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTGCCCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGACCAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCACGGCGACAAGGATGCCAATTGC CTGTGCTGCANATTGTACATTTTGTGATTGTAACACTGTTACTGTGTGAATAACCACGGCACTTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACNTTTTAAATGGAAATTCGTGTTCATCCCAAAAAAAAAa   ]




>consensus_11543#0
CTTCGTCTCCTCCTCTCCACCACTCGTCGTCGTCGGCGGCGTGGCCATGGCGACACCCGC
GCCGCTCTCCGGCCTCCGCCCGCGCGCTCCAGCTCCCGCTCCCACGGCGCGCAGTCGCCT
GTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGGCGGCGTGG
TGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTTAGGGCGGG
GGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCCCGCTCCCT
CGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCTCTGCCGAG
CAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATCCAGCTTGC
TCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGACTAGATCTTGTATTGTGTTTCC
TGACCTACCAGAAAAGCGCAGGGCATCCCAGTTGTTCGGGACTGCTCTAGACTCGATTGA
GACTGCAACTATCAGTTCCCTGGATGAGGTATCTACCGGACCTGTTAATACCTTCTTCAG
ATCAATGAGAGATACCCTGGATTTTGACTTTGCTGACGATGTTGAAGATCGATGGAAATC
TGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTTTCAACTAT
AGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAGCCCTTCTCTTTAATCTTGAACT
AGATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTGCATTACAG
ATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCTAAGACAAT
TGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATACCCAGGGCC
CTGGCAGGTCATGCTTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGC
TCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA
ACAAGGAAGCTCACTAGAATTTCTCAGAAGAGGATACAAGAATGCTACTTGGTGGGAAGA
GAATGTTGATCAGGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTGC
CTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGACAGGAACAGAAGAAAAAAATGG
TTGTCTGAAATTGCAGAGCCCAGGCGACAAGGATGCAAATTGCCTGTGCTGCAATTGTAC
ATTTTGTGATTGTAACATGTTACTGTGTGAGTAACAGGCATTAGAGTTTTGAGAGGATTT
TCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAA
CTTCACATTTTAAATGGAAATTCGTGTTCATCCAAAAAAAAAAGGGG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)