These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11549#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3009 fasta sequence [CGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGCCAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCAGGAATTTGTCGCACATGATGCTGAAGTGAGGTCCTTGTCTATCGGCAAGAAGTCAAGCCGTGTGTTTATCACTGGCGGCAGCGACCGCAAGGTTAACCTGTGGGCCATTGGCAAACAGACACCACTTCTGAGCTTATCAGGCCACACTGGCTCAGTTGAGGCTGTTGAGTTTGATACAGCAGAGGTGCTTGTGCTTGCTGGTTCTTCAAATGGTTCCATCAAGCTCTGGGACTTGGAAGAGGCTAAAGTTGTGCGGTCTCTTACTGGGCACAGATCAAGTTGCACCTCTGTTGAATTCCATCCATTTGGCGAGTTTTTTGCATCTGGTTCTTCAGATACAGATCTTAAGATCTGGGATATAAAGAAAAAAGGATGCATTCACACATATAAGGGTCACAGAGGAGCAATTAGAATAATCAGATTTGCACCTGATGGACGATGGGTTGTCACCGGCGGAGAAGATAATATTGTAAAAGTGTGGGACTTGACAGCTGGAAAGCTTCTACATGACTTCAAGTTCCATAGTGGGCAAATCCGGTGTATTGATTTTCATCCGCAAGAATTTTTGCTTGCAACAGGCTCAGCTGATCGAACAGTTAAGTTTTGGGATCTTGAAACTTTTGAATTGATTGGTTCTGCTGGACCCGAGGCTACTGGTGTTCGCTCTACGGTCTTTCACCCAGATGGAAAAACCCTATTCTGTGGGTTAGACCAAAGCCTAAAGGTATTCTCTTGGGAGCCAGTAAGATGTCATGACGTTGTTGACATGGGATGGAGCAATTTGGCTGACCTTAGTATTTATGAAGGAAAACTCTTGGGATGCTCCTACCACGAATGCCGAGTTGGTGTTTGGGTTGCTGATATATCGCTCATTGGGCCCTATGCTCTTGGTGTTTTGCCCAAAGCAAATTTCTTTGCTGAGCTGGTACATTCTTTAGACGACAATCCTTCGAAAACGATTGATACCACTGCCAAGTCCATTCCTGCTCTAGCAACGACACATCCAAAAAATCTGTACAAGGTCAAGGAAACAGGGACTGCTGAAAGTGGAATTCGTGGCTCAAATTTGACTCCAGCAAGTATGGATAAAACCAAGAGAGATAAGAGTGGTGCAACTCCTCGAAGACCTGATTCTTCTTTCAAATCATCTATTCAGAGCTCTACTCCAATGAGGCGCATGAAAGCTGCTGATAGTCCATACACAAATAGAAAAACAGTGGAGCGCAATTTTGCACAGAGGGATGCCTCGCTAGCATCCCGTACGGGAACAGCTGATAATTCTTCAACTGTTAAAAAAGGCCATCTTGCTGAGTCAGTATCTGTAAAAGATATTTACACTACACCACAGACTGTTTCTGTGCCTGTCGTTATGCCTAGAGACATTTTAGAGGACAAAACAGCAGGCAGCATTAGTGGAGGAATCAGAGGGAGAGCTGCAGTTGCAGATGATTTCCATGCTCCTGTTCATTCAAGGAAACTTTCAGTTAATAGTTTTGTGGGTGATAGTGTTAACTCAACAAAATCCATGCTAACTGATCCTGATGTTTGCTCTGAGGGTTTCTCTGGCTTAAAATTCTCTTTTGGACTAACTCCATATTACAAGAAAGAAGAATATGATAATGTGGATAAAGTTGATAGTATGGATAAAGGTGATAATACACAAATGACAGAAAAATTGGACAGAACAGTGTCGTTGGAGCATCAACTTCAGTCAAATGATACCTCTGAGCCACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGGAGTTGCTGTGCCATTAGGAAAAACAAAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGCTACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGATGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAATTGATGAGGCGATGATTCCAATCAATTTGATGCAGAACCATGATGAATTTATAAATGCCGTAAAATCTCGGCTGACAAAGTTAGAGATGATGCGTCATGTCTTTGACCAAAATGGTATCAAAGGAGCGATTGCTGCAGTGGCAAAGTTGCCTGACAATGCTGTTCTAGCTGATGTTGTTAGTACTCTGAAGGGGAAACTTGATCTCTTCAACCTAGACATTTTCTTAAGCTTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTATTCGTTCAACATTGTCAGCTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTTGCAACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTGAGCTTGGCT-GTGCATAATCTGTAATTAACATTTGTTAC-ATGGACAGCCCCGGATGAGGGAGAAGCAAGTTCAAAAATGGTTGATGTCAGTTCAACGTGGTGATTCATTNTCNAAAAAAAAAAAAAAAAAAA] [+] EMBL AK100949 [CGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGCCAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCAGGAATTTGTCGCACATGATGCTGAAGTGAGGTCCTTGTCTATCGGCAAGAAGTCAAGCCGTGTGTTTATCACTGGCGGCAGCGACCGCAAGGTTAACCTGTGGGCCATTGGCAAACAGACACCACTTCTGAGCTTATCAGGCCACACTGGCTCAGTTGAGGCTGTTGAGTTTGATACAGCAGAGGTGCTTGTGCTTGCTGGTTCTTCAAATGGTTCCATCAAGCTCTGGGACTTGGAAGAGGCTAAAGTTGTGCGGTCTCTTACTGGGCACAGATCAAGTTGCACCTCTGTTGAATTCCATCCATTTGGCGAGTTTTTTGCATCTGGTTCTTCAGATACAGATCTTAAGATCTGGGATATAAAGAAAAAAGGATGCATTCACACATATAAGGGTCACAGAGGAGCAATTAGAATAATCAGATTTGCACCTGATGGACGATGGGTTGTCACCGGCGGAGAAGATAATATTGTAAAAGTGTGGGACTTGACAGCTGGAAAGCTTCTACATGACTTCAAGTTCCATAGTGGGCAAATCCGGTGTATTGATTTTCATCCGCAAGAATTTTTGCTTGCAACAGGCTCAGCTGATCGAACAGTTAAGTTTTGGGATCTTGAAACTTTTGAATTGATTGGTTCTGCTGGACCCGAGGCTACTGGTGTTCGCTCTACGGTCTTTCACCCAGATGGAAAAACCCTATTCTGTGGGTTAGACCAAAGCCTAAAGGTATTCTCTTGGGAGCCAGTAAGATGTCATGACGTTGTTGACATGGGATGGAGCAATTTGGCTGACCTTAGTATTTATGAAGGAAAACTCTTGGGATGCTCCTACCACGAATGCCGAGTTGGTGTTTGGGTTGCTGATATATCGCTCATTGGGCCCTATGCTCTTGGTGTTTTGCCCAAAGCAAATTTCTTTGCTGAGCTGGTACATTCTTTAGACGACAATCCTTCGAAAACGATTGATACCACTGCCAAGTCCATTCCTGCTCTAGCAACGACACATCCAAAAAATCTGTACAAGGTCAAGGAAACAGGGACTGCTGAAAGTGGAATTCGTGGCTCAAATTTGACTCCAGCAAGTATGGATAAAACCAAGAGAGATAAGAGTGGTGCAACTCCTCGAAGACCTGATTCTTCTTTCAAATCATCTATTCAGAGCTCTACTCCAATGAGGCGCATGAAAGCTGCTGATAGTCCATACACAAATAGAAAAACAGTGGAGCGCAATTTTGCACAGAGGGATGCCTCGCTAGCATCCCGTACGGGAACAGCTGATAATTCTTCAACTGTTAAAAAAGGCCATCTTGCTGAGTCAGTATCTGTAAAAGATATTTACACTACACCACAGACTGTTTCTGTGCCTGTCGTTATGCCTAGAGACATTTTAGAGGACAAAACAGCAGGCAGCATTAGTGGAGGAATCAGAGGGAGAGCTGCAGTTGCAGATGATTTCCATGCTCCTGTTCATTCAAGGAAACTTTCAGTTAATAGTTTTGTGGGTGATAGTGTTAACTCAACAAAATCCATGCTAACTGATCCTGATGTTTGCTCTGAGGGTTTCTCTGGCTTAAAATTCTCTTTTGGACTAACTCCATATTACAAGAAAGAAGAATATGATAATGTGGATAAAGTTGATAGTATGGATAAAGGTGATAATACACAAATGACAGAAAAATTGGACAGAACAGTGTCGTTGGAGCATCAACTTCAGTCAAATGATACCTCTGAGCCACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGGAGTTGCTGTGCCATTAGGAAAAACATAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGCTACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGATGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAATTGATGAGGCGATGATTCCAATCAATTTGATGCAGAACCATGATGAATTTATAAATGCCGTAAAATCTCGGCTGACAAAGTTAGAGATGATGCGTCATGTCTTTGACCAAAATGGTATCAAAGGAGCGATTGCTGCAGTGGCAAAGTTGCCTGACAATGCTGTTCTAGCTGATGTTGTTAGTACTCTGAAGGGGAAACTTGATCTCTTCAACCTAGACATTTTCTTAAGCTTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTATTCGTTCAACATTGTCAGCTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTTGCAACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTGAGCTTGGCT GTGCATAATCTGTAATTAACATTTGTTAC ATGGACAGCCCCGGATGAGGGAGAAGCAAGTTCAAAAATGGTTGATGTCAGTTCAAC ] [+] EMBL CB657882 [ CGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCAGGAATTTGTCGCACATGATGCTGAAGTGAGGTCCTTGTCTATCGGCAAGAAGTCAAGCCGTGTGTTTATCACTGGCGGCAGCGACCGCAAGGTTAACCTGTGGGCCATTGGCAAACAGACACCACTTCTGAGCTTATCAGGCCACACTGGCTCAGTTGAGGCTGTTGAGTTTGATACAGCAGAGGTGCTTGTGCTTGCTGGTTCTTCAAATGGTTCCATCAAGCTCTGGGACTTGGAAGAGGCTAAAGTTGTGCGGTCTCTTACTGGGCACAGATCAAGTTGCACCTCTGTTGAATTCCATCCATTTGGCGAGTTTTTTGCATCTGGTTCTTCAGATACAGATCTTAAGATCTGGGATATAAAGAAAAAAGGATGCATTCACACATATAAGGGTCACAGAGGAGCAATTAGAACAATCAGATTTACACCTGATGGACGATGGGTTGTCACCGGCGGAGAAGATAATATTGTAAAAGTGTGGGACTTGACAGCTGGAAAGCTTCTACATGACTTCAAGTTCCATAGTGGGCAAATCCGGTGTATTGATTTTCATCCGCAAGAATTTTTGCTTGCAACAGGCTCAGCTGATCGAACAGTTAAGTTTTGGGATCTTGAAACTTTTGAATTGATTGGTTCTGCTGGACCCGAGGCTACTGGTGTTCGCTCTACGGTCTTTCACCCAGATGGAAAAACCCTATTCTGTGGGTTAGA ] [+] EMBL AU181204 [ ACACAAATGACAGAAAAATTGGACAGAACAGTGTCGTTGGAGCATCAACTTCAGTCAAATGATACCTCTGAGCCACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGGAGTTGCTGTGCCATTAGGAAAAACAAAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGCTACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGATGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAATTGATGAGGCGATGATTCCAATCAATTTGATGCAGAACCATGATGAATTTATAAATGCCGTAAAATCTCGGCTGACAAAGTTAGAGATGATGCGTCATGTCTTTGACCAAAATGGTATCAAAGGAGCGATTGCTGCA ] [+] EMBL C25994 [ ACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGGAGTTGCTGTGCCATTAGGAAAAACAAAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGCTACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGATGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAATTGATGAGGCGATGATTCCAATCAATTTGATGCAGAACCATGATGAATTTATAAATGCCGTAAAATCTCGGCTGACAAAGTTAGAGATGATGCGTCATGTCTTTGACCAAAATGGTATCAAAGGAGCGATTGCTGCAGTGGCAAAGTTGCCTGACAATGCTGTTCTAGCTGATGTTGTTAGTACT ] [+] EMBL OS1321866 [ AACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGNCA GCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCNTGTTGTACATGTGAGCTTGGCTNGTGCATAATCTGNAATTAACATTTGTTACAATGG ] [+] EMBL AU174398 [ TGATTTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACCCAGTGAGAGTAGATAACTAGACATCATTNTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGNGTAGTCCCCTGTTGTACATGTGAGCTTGGCT GTGCATAATCTGTAATTAACATTTGTTAC ATGGACAGCCCCGGATGAGGGANAAGCAAGTTCAAAAATGGTTGATGTCAGTTCAACGTGGTGATTCATTNTCNAAAAAAAAAAAAAAAAAAA] consensusID : consensus_11549#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 832 fasta sequence [CGAAGGGGGAGAAAGGGAGGCGACAAAAACTCCACTCTCTCACTCCGGCACAGCACTCCCCCCACCCACCTACCCACGCCGCTCCACACCTCTCGTTTTCACTGCTTGCTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAGGAAAAAGGAAGGCGACGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGCCAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCGTATCCTTTTTTTTTTTTTTTTTTTGCTGCTACTGCGTCGTTGGGTTGCCCTTCTGTTTGCCCGGTTCTTGATCCGATTTGGCTCGGAGGAGGAAGGAATCGTGGTTTGCCGGAGCAATCTGGGTAGGCATTTGCTCGAGCGGTTGAGGGGGAGTATTATTTCCCCTCCCTCAAATTCTAGTCTTGTGTTGTTGTGGGTAGTTTCTTGGAGCGACAGTGGTGGTCTCGAGAAAATTTTCGCCACCTTTTTCTTTCTTGGCAATCTGCGCCAAGGTTGAAGTCGTTTCTGATTTCAAGAGGGAACTGAACTACCACTAAATGTTTCAACAGGTTCAGCAAATAGTTTCCTTTAGTGCCCAGTTTAGGTTAGCAATGCGCCAATTCCGAATCACCAAGTCTAATTTGCTTCCGAAGCAACTATAACTAAATTGTGAAGTTCATCCGGGAAAAAAACAGCTATGTATTGATA] [+] EMBL AK108379 [CGAAGGGGGAGAAAGGGAGGCGACAAAAACTCCACTCTCTCACTCCGGCACAGCACTCCCCCCACCCACCTACCCACGCCGCTCCACACCTCTCGTTTTCACTGCTTGCTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAGGAAAAAGGAAGGCGACGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGCCAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCGTATCCTTTTTTTTTTTTTTTTTTTGCTGCTACTGCGTCGTTGGGTTGCCCTTCTGTTTGCCCGGTTCTTGATCCGATTTGGCTCGGAGGAGGAAGGAATCGTGGTTTGCCGGAGCAATCTGGGTAGGCATTTGCTCGAGCGGTTGAGGGGGAGTATTATTTCCCCTCCCTCAAATTCTAGTCTTGTGTTGTTGTGGGTAGTTTCTTGGAGCGACAGTGGTGGTCTCGAGAAAATTTTCGCCACCTTTTTCTTTCTTGGCAATCTGCGCCAAGGTTGAAGTCGTTTCTGATTTCAAGAGGGAACTGAACTACCACTAAATGTTTCAACAGGTTCAGCAAATAGTTTCCTTTAGTGCCCAGTTTAGGTTAGCAATGCGCCAATTCCGAATCACCAAGTCTAATTTGCTTCCGAAGCAACTATAACTAAATTGTGAAGTTCATCCGGGAAAAAAACAGCTATGTATTGATA] [+] EMBL BI804567 [ GAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCGTATCC TTTTTTTTTTTTTTTTGCTGCTACTGCGTCGTTGGGTTGCCCTTCTGTTTGCCCGGTTCTTGATCCGATTTGGCTCGGAGGAGGAAGGAATCGTGGTTTGCCGGAGCAATCTGGGTAGGCATTTGCTCGAGCGGTTGCGGGGGAGTATTATTTCCCCTCCCTCAAATTCTAGTCTTGTGTTGTTGTGGGTAGTTTCTTGGAGCGACAGTGGTGGTCTCGAGAAAATTTTCGCCACCTTTTTCTTTCTTGGCAATCTGCGCCAAGGTTGAAGTCGTTTCTGATTTCAAGAAGGAACTGAACTACCACTAAATGTTTCAACAGGTTCAGCAAATAGTTTCCTTTAGTGCCCAGTTTAGGTTAGCAATGCGCCAATTCAGAATCACCAAGTCTAATTTGCTTCCGAAGCAACTATAACTAAATTGTGAAGTTCATCCGGGAAAAAAACAGCTAaaaaaaaaa ] consensusID : consensus_11549#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 759 fasta sequence [CTTAAGCTTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTTATTCGTTCAACATTGTCAGCTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTACGTGCATTAATGTTATTCAAGGGAATGCTATTTAAAGGACGCCGCAAAACCTGCAAATTGCAAAGAGACACTGGATGTGAGGTGACAAGTGGGTTCTGTCCCTGCACTTCAGTTAGGAACCATTGTTTTAAAGAACTGCAGTGTTTGTAGCATCCTATAACCTATTGCTCTGCCTATGCCAAGATGAACTGGACTGTTGCTGACTTCGTTGATGTCACAGGTTGCAACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTGAGCTTGGCTGTGCATAATCTGTAATTACCATTTGTTNCA] [-] EMBL CB657883 [CTTAAGCTTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTTATTCGTTCAACATTGTCAGCTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTACGTGCATTAATGTTATTCAAGGGAATGCTATTTAAAGGACGCCGCAAAACCTGCAAATTGCAAAGAGACACTGGATGTGAGGTGACAAGTGGGTTCTGTCCCTGCACTTCAGTTAGGAACCATTGTTTTAAAGAACTGCAGTGTTTGTAGCATCCTATAACCTATTGCTCTGCCTATGCCAAGATGAACTGGACTGTTGCTGACTTCGTTGATGTCACAGGTTGCAACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTGAGCTTGGCTGTGCATAATCTGTAATTACCATTTGTTNCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11549#0 CGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTA 60 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 CTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGC 120 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 CAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCC 180 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 CGAGAAGCGCGGCTACAGGCTCCAGGAATTTGTCGCACATGATGCTGAAGTGAGGTCCTT 240 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 GTCTATCGGCAAGAAGTCAAGCCGTGTGTTTATCACTGGCGGCAGCGACCGCAAGGTTAA 300 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 CCTGTGGGCCATTGGCAAACAGACACCACTTCTGAGCTTATCAGGCCACACTGGCTCAGT 360 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TGAGGCTGTTGAGTTTGATACAGCAGAGGTGCTTGTGCTTGCTGGTTCTTCAAATGGTTC 420 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 CATCAAGCTCTGGGACTTGGAAGAGGCTAAAGTTGTGCGGTCTCTTACTGGGCACAGATC 480 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 AAGTTGCACCTCTGTTGAATTCCATCCATTTGGCGAGTTTTTTGCATCTGGTTCTTCAGA 540 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TACAGATCTTAAGATCTGGGATATAAAGAAAAAAGGATGCATTCACACATATAAGGGTCA 600 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 CAGAGGAGCAATTAGAATAATCAGATTTGCACCTGATGGACGATGGGTTGTCACCGGCGG 660 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 AGAAGATAATATTGTAAAAGTGTGGGACTTGACAGCTGGAAAGCTTCTACATGACTTCAA 720 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 GTTCCATAGTGGGCAAATCCGGTGTATTGATTTTCATCCGCAAGAATTTTTGCTTGCAAC 780 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 AGGCTCAGCTGATCGAACAGTTAAGTTTTGGGATCTTGAAACTTTTGAATTGATTGGTTC 840 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TGCTGGACCCGAGGCTACTGGTGTTCGCTCTACGGTCTTTCACCCAGATGGAAAAACCCT 900 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 ATTCTGTGGGTTAGACCAAAGCCTAAAGGTATTCTCTTGGGAGCCAGTAAGATGTCATGA 960 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 CGTTGTTGACATGGGATGGAGCAATTTGGCTGACCTTAGTATTTATGAAGGAAAACTCTT 1020 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 GGGATGCTCCTACCACGAATGCCGAGTTGGTGTTTGGGTTGCTGATATATCGCTCATTGG 1080 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 GCCCTATGCTCTTGGTGTTTTGCCCAAAGCAAATTTCTTTGCTGAGCTGGTACATTCTTT 1140 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 AGACGACAATCCTTCGAAAACGATTGATACCACTGCCAAGTCCATTCCTGCTCTAGCAAC 1200 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 GACACATCCAAAAAATCTGTACAAGGTCAAGGAAACAGGGACTGCTGAAAGTGGAATTCG 1260 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TGGCTCAAATTTGACTCCAGCAAGTATGGATAAAACCAAGAGAGATAAGAGTGGTGCAAC 1320 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TCCTCGAAGACCTGATTCTTCTTTCAAATCATCTATTCAGAGCTCTACTCCAATGAGGCG 1380 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 CATGAAAGCTGCTGATAGTCCATACACAAATAGAAAAACAGTGGAGCGCAATTTTGCACA 1440 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 GAGGGATGCCTCGCTAGCATCCCGTACGGGAACAGCTGATAATTCTTCAACTGTTAAAAA 1500 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 AGGCCATCTTGCTGAGTCAGTATCTGTAAAAGATATTTACACTACACCACAGACTGTTTC 1560 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TGTGCCTGTCGTTATGCCTAGAGACATTTTAGAGGACAAAACAGCAGGCAGCATTAGTGG 1620 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 AGGAATCAGAGGGAGAGCTGCAGTTGCAGATGATTTCCATGCTCCTGTTCATTCAAGGAA 1680 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 ACTTTCAGTTAATAGTTTTGTGGGTGATAGTGTTAACTCAACAAAATCCATGCTAACTGA 1740 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TCCTGATGTTTGCTCTGAGGGTTTCTCTGGCTTAAAATTCTCTTTTGGACTAACTCCATA 1800 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TTACAAGAAAGAAGAATATGATAATGTGGATAAAGTTGATAGTATGGATAAAGGTGATAA 1860 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TACACAAATGACAGAAAAATTGGACAGAACAGTGTCGTTGGAGCATCAACTTCAGTCAAA 1920 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TGATACCTCTGAGCCACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGG 1980 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 AGTTGCTGTGCCATTAGGAAAAACAAAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGC 2040 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGA 2100 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 ------------------------------------------------------------ consensus_11549#0 TGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAAT 2160 consensus_11549#2 ---------------------------------------CTTAAGCTTTCTGCCTGTTCT 21 consensus_11549#1 -------------------CGAAGGGGGAGAAAGGGAGGCGACAAAAACTCCACT-CTCT 40 * * * consensus_11549#0 TGATGAGGCGATG-ATTCCAATCAATTTGATGCAGA-ACCATGATGAATTTATAAATGCC 2218 consensus_11549#2 TGCGGGGTTACTG-A--CCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTT 78 consensus_11549#1 CACTCCGGCACAGCACTCCCCCCACCCACCTACCCACGCCGCTCCACACCTCTCGTTTTC 100 * * * ** * * ** * * consensus_11549#0 GTAAAATCTCGGCTGACAAAGTTAGA--GATGATGCGTC--ATGTCTTTGACCAAAATGG 2274 consensus_11549#2 GTTGGATCTTA-TAAAGATCTTTGGACCAGTTATTCGTTCAACATTGTCAGCTCATTCAG 137 consensus_11549#1 ACTGCTTGCTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGAA-------GAGGAAAAAGG 153 * * * ** * * * * consensus_11549#0 TA-TCAAAGGAGCGATTGCTGCAGT-GGCAAAGTTGCCTGA--CAATGCTGTTCTAGCTG 2330 consensus_11549#2 CAGTTGGAGTTGATATTCAGGCTG--AGCAGAGGTACGTGCATTAATGTTATTCAAGGGA 195 consensus_11549#1 AAGGCGACGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATA 213 * * * * * * * * * * * * ** consensus_11549#0 ATGT-TGTTAGTACTCTGAAGGGGAAACTTGATCTCTTCAACCTAGACATTTTCTTAAGC 2389 consensus_11549#2 ATGC-TATTT--------AAAGGACGCCGCAAAACCTGCAAATTGCAAAGAGACACTGGA 246 consensus_11549#1 CCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACT 273 * * ** * * * consensus_11549#0 TTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCT 2449 consensus_11549#2 TGTGAG---GTGACAAGTGGGTTCTGTCCCTGCACTTCAGTTAGGAA--CCATTGTTT-T 300 consensus_11549#1 CCGCTGCCAGCGCGT-CGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGG 332 * * * * * ** ** * consensus_11549#0 TTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTATTCGTTCAACATTGTCAG 2509 consensus_11549#2 AAAGAACTGCAGTG----TTTGTAGCATCCTATAACCTATTGCTCTGCCTATGCCA--AG 354 consensus_11549#1 ATGGACCCCGAGAAGCGCGGCTACAGGCTCCGTATCCTTTTTTTTTTTTTTTTTTTGCTG 392 ** * * * * * * * consensus_11549#0 CTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTTGCAACGTTGCAG-TCGG 2568 consensus_11549#2 ATGAACTGG--ACTGTTGCTGACTTCGTTGATGT-CACAGGTTGCAACGTTGCAG-TCGG 410 consensus_11549#1 CT-ACTGCGTCGTTGG-GTTGCCCTTCTGTTTGCCCGGTTCTTGATCCGATTTGGCTCGG 450 * * * ** * ** * ** * *** ** * * **** consensus_11549#0 TGTTTTAACCATTTGCAAAAGATTC-AGCAAGTTCTACACCCGTTGATTATGCGGGGTGG 2627 consensus_11549#2 TGTTTTAACCATTTGCAAAAGATTC-AGCAAGTTCTACACCCGTTGATTATGCGGGGTGG 469 consensus_11549#1 AGGAGGAAGGAATCGTGGTTTGCCGGAGCAATCTGGGTAGGCATTTGCT-CGAGCGGTTG 509 * ** * * * ***** * * * ** * * * *** * consensus_11549#0 TCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTT--GGTGGTGATC 2685 consensus_11549#2 TCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTT--GGTGGTGATC 527 consensus_11549#1 AGGGGGAGTATTATTTCCCCTCCCTCAAATTCTAGTCTTGTGTTGTTGTGGGTAGTTTCT 569 ** * * ** *** * * ** *** * *** ** consensus_11549#0 TGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGAC 2745 consensus_11549#2 TGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGAC 587 consensus_11549#1 TGGAGCGACAGTGGTGGTCT---------------------CGAGAAAATTTTCGCCACC 608 ** * * * * ** *** **** * * * consensus_11549#0 ATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATA 2805 consensus_11549#2 ATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATA 647 consensus_11549#1 TTTTTCTTTCTTGGCAATC--TGCGCCAAGGTTGAAG-----TCGTTTCTGATTTCAAGA 661 * * ** ******* ****** * * * ** ** ** * * * consensus_11549#0 GCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCC 2865 consensus_11549#2 GCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCC 707 consensus_11549#1 G----GGAACTGAACTACCACTAAATGTTTCAACAGGTTCAGCAAATAGTT----TCCTT 713 * * ** *** ** ***** ** * * * * *** consensus_11549#0 TGTTGTACATGTGAGCTTGGCTGTGCAT-AATCTGTAATTAACATTTGTTACATGGACAG 2924 consensus_11549#2 TGTTGTACATGTGAGCTTGGCTGTGCAT-AATCTGTAATTACCATTTGTTNCA------- 759 consensus_11549#1 TAGTGCCCAGTTTAGGTTAGCAATGCGCCAATTCCGAATCACCAAGTCTAATTTGC---- 769 * ** ** * ** ** ** *** *** *** * ** * * consensus_11549#0 CCCCGGATGAGGGAGAAGCAAGTTCAAAAATGGTTGATGTCAGTTCAACGTGGTGATTCA 2984 consensus_11549#2 ------------------------------------------------------------ consensus_11549#1 TTCCGAAGCAACTATAACTAAATTGTGAA---GTTCATCCGGGAAAAAAACAGCTATGTA 826 consensus_11549#0 TTNTCNAAAAAAAAAAAAAAAAAAA 3009 consensus_11549#2 ------------------------- consensus_11549#1 TTGATA------------------- 832 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||