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Oryza sativa
cluster # 11549 cluster # 11549       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11549#0 length = 3009 sequences # 6  
consensus_11549#1 length = 832 sequences # 2  
consensus_11549#2 length = 759 sequences # 1  

consensusID : consensus_11549#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 3009
fasta sequence
                              [CGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGCCAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCAGGAATTTGTCGCACATGATGCTGAAGTGAGGTCCTTGTCTATCGGCAAGAAGTCAAGCCGTGTGTTTATCACTGGCGGCAGCGACCGCAAGGTTAACCTGTGGGCCATTGGCAAACAGACACCACTTCTGAGCTTATCAGGCCACACTGGCTCAGTTGAGGCTGTTGAGTTTGATACAGCAGAGGTGCTTGTGCTTGCTGGTTCTTCAAATGGTTCCATCAAGCTCTGGGACTTGGAAGAGGCTAAAGTTGTGCGGTCTCTTACTGGGCACAGATCAAGTTGCACCTCTGTTGAATTCCATCCATTTGGCGAGTTTTTTGCATCTGGTTCTTCAGATACAGATCTTAAGATCTGGGATATAAAGAAAAAAGGATGCATTCACACATATAAGGGTCACAGAGGAGCAATTAGAATAATCAGATTTGCACCTGATGGACGATGGGTTGTCACCGGCGGAGAAGATAATATTGTAAAAGTGTGGGACTTGACAGCTGGAAAGCTTCTACATGACTTCAAGTTCCATAGTGGGCAAATCCGGTGTATTGATTTTCATCCGCAAGAATTTTTGCTTGCAACAGGCTCAGCTGATCGAACAGTTAAGTTTTGGGATCTTGAAACTTTTGAATTGATTGGTTCTGCTGGACCCGAGGCTACTGGTGTTCGCTCTACGGTCTTTCACCCAGATGGAAAAACCCTATTCTGTGGGTTAGACCAAAGCCTAAAGGTATTCTCTTGGGAGCCAGTAAGATGTCATGACGTTGTTGACATGGGATGGAGCAATTTGGCTGACCTTAGTATTTATGAAGGAAAACTCTTGGGATGCTCCTACCACGAATGCCGAGTTGGTGTTTGGGTTGCTGATATATCGCTCATTGGGCCCTATGCTCTTGGTGTTTTGCCCAAAGCAAATTTCTTTGCTGAGCTGGTACATTCTTTAGACGACAATCCTTCGAAAACGATTGATACCACTGCCAAGTCCATTCCTGCTCTAGCAACGACACATCCAAAAAATCTGTACAAGGTCAAGGAAACAGGGACTGCTGAAAGTGGAATTCGTGGCTCAAATTTGACTCCAGCAAGTATGGATAAAACCAAGAGAGATAAGAGTGGTGCAACTCCTCGAAGACCTGATTCTTCTTTCAAATCATCTATTCAGAGCTCTACTCCAATGAGGCGCATGAAAGCTGCTGATAGTCCATACACAAATAGAAAAACAGTGGAGCGCAATTTTGCACAGAGGGATGCCTCGCTAGCATCCCGTACGGGAACAGCTGATAATTCTTCAACTGTTAAAAAAGGCCATCTTGCTGAGTCAGTATCTGTAAAAGATATTTACACTACACCACAGACTGTTTCTGTGCCTGTCGTTATGCCTAGAGACATTTTAGAGGACAAAACAGCAGGCAGCATTAGTGGAGGAATCAGAGGGAGAGCTGCAGTTGCAGATGATTTCCATGCTCCTGTTCATTCAAGGAAACTTTCAGTTAATAGTTTTGTGGGTGATAGTGTTAACTCAACAAAATCCATGCTAACTGATCCTGATGTTTGCTCTGAGGGTTTCTCTGGCTTAAAATTCTCTTTTGGACTAACTCCATATTACAAGAAAGAAGAATATGATAATGTGGATAAAGTTGATAGTATGGATAAAGGTGATAATACACAAATGACAGAAAAATTGGACAGAACAGTGTCGTTGGAGCATCAACTTCAGTCAAATGATACCTCTGAGCCACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGGAGTTGCTGTGCCATTAGGAAAAACAAAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGCTACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGATGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAATTGATGAGGCGATGATTCCAATCAATTTGATGCAGAACCATGATGAATTTATAAATGCCGTAAAATCTCGGCTGACAAAGTTAGAGATGATGCGTCATGTCTTTGACCAAAATGGTATCAAAGGAGCGATTGCTGCAGTGGCAAAGTTGCCTGACAATGCTGTTCTAGCTGATGTTGTTAGTACTCTGAAGGGGAAACTTGATCTCTTCAACCTAGACATTTTCTTAAGCTTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTATTCGTTCAACATTGTCAGCTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTTGCAACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTGAGCTTGGCT-GTGCATAATCTGTAATTAACATTTGTTAC-ATGGACAGCCCCGGATGAGGGAGAAGCAAGTTCAAAAATGGTTGATGTCAGTTCAACGTGGTGATTCATTNTCNAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK100949             [CGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGCCAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCAGGAATTTGTCGCACATGATGCTGAAGTGAGGTCCTTGTCTATCGGCAAGAAGTCAAGCCGTGTGTTTATCACTGGCGGCAGCGACCGCAAGGTTAACCTGTGGGCCATTGGCAAACAGACACCACTTCTGAGCTTATCAGGCCACACTGGCTCAGTTGAGGCTGTTGAGTTTGATACAGCAGAGGTGCTTGTGCTTGCTGGTTCTTCAAATGGTTCCATCAAGCTCTGGGACTTGGAAGAGGCTAAAGTTGTGCGGTCTCTTACTGGGCACAGATCAAGTTGCACCTCTGTTGAATTCCATCCATTTGGCGAGTTTTTTGCATCTGGTTCTTCAGATACAGATCTTAAGATCTGGGATATAAAGAAAAAAGGATGCATTCACACATATAAGGGTCACAGAGGAGCAATTAGAATAATCAGATTTGCACCTGATGGACGATGGGTTGTCACCGGCGGAGAAGATAATATTGTAAAAGTGTGGGACTTGACAGCTGGAAAGCTTCTACATGACTTCAAGTTCCATAGTGGGCAAATCCGGTGTATTGATTTTCATCCGCAAGAATTTTTGCTTGCAACAGGCTCAGCTGATCGAACAGTTAAGTTTTGGGATCTTGAAACTTTTGAATTGATTGGTTCTGCTGGACCCGAGGCTACTGGTGTTCGCTCTACGGTCTTTCACCCAGATGGAAAAACCCTATTCTGTGGGTTAGACCAAAGCCTAAAGGTATTCTCTTGGGAGCCAGTAAGATGTCATGACGTTGTTGACATGGGATGGAGCAATTTGGCTGACCTTAGTATTTATGAAGGAAAACTCTTGGGATGCTCCTACCACGAATGCCGAGTTGGTGTTTGGGTTGCTGATATATCGCTCATTGGGCCCTATGCTCTTGGTGTTTTGCCCAAAGCAAATTTCTTTGCTGAGCTGGTACATTCTTTAGACGACAATCCTTCGAAAACGATTGATACCACTGCCAAGTCCATTCCTGCTCTAGCAACGACACATCCAAAAAATCTGTACAAGGTCAAGGAAACAGGGACTGCTGAAAGTGGAATTCGTGGCTCAAATTTGACTCCAGCAAGTATGGATAAAACCAAGAGAGATAAGAGTGGTGCAACTCCTCGAAGACCTGATTCTTCTTTCAAATCATCTATTCAGAGCTCTACTCCAATGAGGCGCATGAAAGCTGCTGATAGTCCATACACAAATAGAAAAACAGTGGAGCGCAATTTTGCACAGAGGGATGCCTCGCTAGCATCCCGTACGGGAACAGCTGATAATTCTTCAACTGTTAAAAAAGGCCATCTTGCTGAGTCAGTATCTGTAAAAGATATTTACACTACACCACAGACTGTTTCTGTGCCTGTCGTTATGCCTAGAGACATTTTAGAGGACAAAACAGCAGGCAGCATTAGTGGAGGAATCAGAGGGAGAGCTGCAGTTGCAGATGATTTCCATGCTCCTGTTCATTCAAGGAAACTTTCAGTTAATAGTTTTGTGGGTGATAGTGTTAACTCAACAAAATCCATGCTAACTGATCCTGATGTTTGCTCTGAGGGTTTCTCTGGCTTAAAATTCTCTTTTGGACTAACTCCATATTACAAGAAAGAAGAATATGATAATGTGGATAAAGTTGATAGTATGGATAAAGGTGATAATACACAAATGACAGAAAAATTGGACAGAACAGTGTCGTTGGAGCATCAACTTCAGTCAAATGATACCTCTGAGCCACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGGAGTTGCTGTGCCATTAGGAAAAACATAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGCTACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGATGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAATTGATGAGGCGATGATTCCAATCAATTTGATGCAGAACCATGATGAATTTATAAATGCCGTAAAATCTCGGCTGACAAAGTTAGAGATGATGCGTCATGTCTTTGACCAAAATGGTATCAAAGGAGCGATTGCTGCAGTGGCAAAGTTGCCTGACAATGCTGTTCTAGCTGATGTTGTTAGTACTCTGAAGGGGAAACTTGATCTCTTCAACCTAGACATTTTCTTAAGCTTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTATTCGTTCAACATTGTCAGCTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTTGCAACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTGAGCTTGGCT GTGCATAATCTGTAATTAACATTTGTTAC ATGGACAGCCCCGGATGAGGGAGAAGCAAGTTCAAAAATGGTTGATGTCAGTTCAAC                                    ]
[+] EMBL CB657882             [                                                                                                                                             CGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCAGGAATTTGTCGCACATGATGCTGAAGTGAGGTCCTTGTCTATCGGCAAGAAGTCAAGCCGTGTGTTTATCACTGGCGGCAGCGACCGCAAGGTTAACCTGTGGGCCATTGGCAAACAGACACCACTTCTGAGCTTATCAGGCCACACTGGCTCAGTTGAGGCTGTTGAGTTTGATACAGCAGAGGTGCTTGTGCTTGCTGGTTCTTCAAATGGTTCCATCAAGCTCTGGGACTTGGAAGAGGCTAAAGTTGTGCGGTCTCTTACTGGGCACAGATCAAGTTGCACCTCTGTTGAATTCCATCCATTTGGCGAGTTTTTTGCATCTGGTTCTTCAGATACAGATCTTAAGATCTGGGATATAAAGAAAAAAGGATGCATTCACACATATAAGGGTCACAGAGGAGCAATTAGAACAATCAGATTTACACCTGATGGACGATGGGTTGTCACCGGCGGAGAAGATAATATTGTAAAAGTGTGGGACTTGACAGCTGGAAAGCTTCTACATGACTTCAAGTTCCATAGTGGGCAAATCCGGTGTATTGATTTTCATCCGCAAGAATTTTTGCTTGCAACAGGCTCAGCTGATCGAACAGTTAAGTTTTGGGATCTTGAAACTTTTGAATTGATTGGTTCTGCTGGACCCGAGGCTACTGGTGTTCGCTCTACGGTCTTTCACCCAGATGGAAAAACCCTATTCTGTGGGTTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU181204             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACACAAATGACAGAAAAATTGGACAGAACAGTGTCGTTGGAGCATCAACTTCAGTCAAATGATACCTCTGAGCCACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGGAGTTGCTGTGCCATTAGGAAAAACAAAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGCTACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGATGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAATTGATGAGGCGATGATTCCAATCAATTTGATGCAGAACCATGATGAATTTATAAATGCCGTAAAATCTCGGCTGACAAAGTTAGAGATGATGCGTCATGTCTTTGACCAAAATGGTATCAAAGGAGCGATTGCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C25994               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGGAGTTGCTGTGCCATTAGGAAAAACAAAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGCTACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGATGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAATTGATGAGGCGATGATTCCAATCAATTTGATGCAGAACCATGATGAATTTATAAATGCCGTAAAATCTCGGCTGACAAAGTTAGAGATGATGCGTCATGTCTTTGACCAAAATGGTATCAAAGGAGCGATTGCTGCAGTGGCAAAGTTGCCTGACAATGCTGTTCTAGCTGATGTTGTTAGTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OS1321866            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGNCA  GCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCNTGTTGTACATGTGAGCTTGGCTNGTGCATAATCTGNAATTAACATTTGTTACAATGG                                                                                         ]
[+] EMBL AU174398             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGATTTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACCCAGTGAGAGTAGATAACTAGACATCATTNTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGNGTAGTCCCCTGTTGTACATGTGAGCTTGGCT GTGCATAATCTGTAATTAACATTTGTTAC ATGGACAGCCCCGGATGAGGGANAAGCAAGTTCAAAAATGGTTGATGTCAGTTCAACGTGGTGATTCATTNTCNAAAAAAAAAAAAAAAAAAA]


>consensus_11549#0 CGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTA CTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGC CAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCC CGAGAAGCGCGGCTACAGGCTCCAGGAATTTGTCGCACATGATGCTGAAGTGAGGTCCTT GTCTATCGGCAAGAAGTCAAGCCGTGTGTTTATCACTGGCGGCAGCGACCGCAAGGTTAA CCTGTGGGCCATTGGCAAACAGACACCACTTCTGAGCTTATCAGGCCACACTGGCTCAGT TGAGGCTGTTGAGTTTGATACAGCAGAGGTGCTTGTGCTTGCTGGTTCTTCAAATGGTTC CATCAAGCTCTGGGACTTGGAAGAGGCTAAAGTTGTGCGGTCTCTTACTGGGCACAGATC AAGTTGCACCTCTGTTGAATTCCATCCATTTGGCGAGTTTTTTGCATCTGGTTCTTCAGA TACAGATCTTAAGATCTGGGATATAAAGAAAAAAGGATGCATTCACACATATAAGGGTCA CAGAGGAGCAATTAGAATAATCAGATTTGCACCTGATGGACGATGGGTTGTCACCGGCGG AGAAGATAATATTGTAAAAGTGTGGGACTTGACAGCTGGAAAGCTTCTACATGACTTCAA GTTCCATAGTGGGCAAATCCGGTGTATTGATTTTCATCCGCAAGAATTTTTGCTTGCAAC AGGCTCAGCTGATCGAACAGTTAAGTTTTGGGATCTTGAAACTTTTGAATTGATTGGTTC TGCTGGACCCGAGGCTACTGGTGTTCGCTCTACGGTCTTTCACCCAGATGGAAAAACCCT ATTCTGTGGGTTAGACCAAAGCCTAAAGGTATTCTCTTGGGAGCCAGTAAGATGTCATGA CGTTGTTGACATGGGATGGAGCAATTTGGCTGACCTTAGTATTTATGAAGGAAAACTCTT GGGATGCTCCTACCACGAATGCCGAGTTGGTGTTTGGGTTGCTGATATATCGCTCATTGG GCCCTATGCTCTTGGTGTTTTGCCCAAAGCAAATTTCTTTGCTGAGCTGGTACATTCTTT AGACGACAATCCTTCGAAAACGATTGATACCACTGCCAAGTCCATTCCTGCTCTAGCAAC GACACATCCAAAAAATCTGTACAAGGTCAAGGAAACAGGGACTGCTGAAAGTGGAATTCG TGGCTCAAATTTGACTCCAGCAAGTATGGATAAAACCAAGAGAGATAAGAGTGGTGCAAC TCCTCGAAGACCTGATTCTTCTTTCAAATCATCTATTCAGAGCTCTACTCCAATGAGGCG CATGAAAGCTGCTGATAGTCCATACACAAATAGAAAAACAGTGGAGCGCAATTTTGCACA GAGGGATGCCTCGCTAGCATCCCGTACGGGAACAGCTGATAATTCTTCAACTGTTAAAAA AGGCCATCTTGCTGAGTCAGTATCTGTAAAAGATATTTACACTACACCACAGACTGTTTC TGTGCCTGTCGTTATGCCTAGAGACATTTTAGAGGACAAAACAGCAGGCAGCATTAGTGG AGGAATCAGAGGGAGAGCTGCAGTTGCAGATGATTTCCATGCTCCTGTTCATTCAAGGAA ACTTTCAGTTAATAGTTTTGTGGGTGATAGTGTTAACTCAACAAAATCCATGCTAACTGA TCCTGATGTTTGCTCTGAGGGTTTCTCTGGCTTAAAATTCTCTTTTGGACTAACTCCATA TTACAAGAAAGAAGAATATGATAATGTGGATAAAGTTGATAGTATGGATAAAGGTGATAA TACACAAATGACAGAAAAATTGGACAGAACAGTGTCGTTGGAGCATCAACTTCAGTCAAA TGATACCTCTGAGCCACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGG AGTTGCTGTGCCATTAGGAAAAACAAAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGC TACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGA TGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAAT TGATGAGGCGATGATTCCAATCAATTTGATGCAGAACCATGATGAATTTATAAATGCCGT AAAATCTCGGCTGACAAAGTTAGAGATGATGCGTCATGTCTTTGACCAAAATGGTATCAA AGGAGCGATTGCTGCAGTGGCAAAGTTGCCTGACAATGCTGTTCTAGCTGATGTTGTTAG TACTCTGAAGGGGAAACTTGATCTCTTCAACCTAGACATTTTCTTAAGCTTTCTGCCTGT TCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTT GTTGGATCTTATAAAGATCTTTGGACCAGTATTCGTTCAACATTGTCAGCTCATTCAGCA GTTGGAGTTGATATTCAGGCTGAGCAGAGGTTGCAACGTTGCAGTCGGTGTTTTAACCAT TTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAA CTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGA GGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGC AAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGC TGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTGAG CTTGGCTGTGCATAATCTGTAATTAACATTTGTTACATGGACAGCCCCGGATGAGGGAGA AGCAAGTTCAAAAATGGTTGATGTCAGTTCAACGTGGTGATTCATTNTCNAAAAAAAAAA AAAAAAAAA



consensusID : consensus_11549#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 832
fasta sequence
                              [CGAAGGGGGAGAAAGGGAGGCGACAAAAACTCCACTCTCTCACTCCGGCACAGCACTCCCCCCACCCACCTACCCACGCCGCTCCACACCTCTCGTTTTCACTGCTTGCTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAGGAAAAAGGAAGGCGACGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGCCAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCGTATCCTTTTTTTTTTTTTTTTTTTGCTGCTACTGCGTCGTTGGGTTGCCCTTCTGTTTGCCCGGTTCTTGATCCGATTTGGCTCGGAGGAGGAAGGAATCGTGGTTTGCCGGAGCAATCTGGGTAGGCATTTGCTCGAGCGGTTGAGGGGGAGTATTATTTCCCCTCCCTCAAATTCTAGTCTTGTGTTGTTGTGGGTAGTTTCTTGGAGCGACAGTGGTGGTCTCGAGAAAATTTTCGCCACCTTTTTCTTTCTTGGCAATCTGCGCCAAGGTTGAAGTCGTTTCTGATTTCAAGAGGGAACTGAACTACCACTAAATGTTTCAACAGGTTCAGCAAATAGTTTCCTTTAGTGCCCAGTTTAGGTTAGCAATGCGCCAATTCCGAATCACCAAGTCTAATTTGCTTCCGAAGCAACTATAACTAAATTGTGAAGTTCATCCGGGAAAAAAACAGCTATGTATTGATA]

[+] EMBL AK108379             [CGAAGGGGGAGAAAGGGAGGCGACAAAAACTCCACTCTCTCACTCCGGCACAGCACTCCCCCCACCCACCTACCCACGCCGCTCCACACCTCTCGTTTTCACTGCTTGCTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAGGAAAAAGGAAGGCGACGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGCCAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCGTATCCTTTTTTTTTTTTTTTTTTTGCTGCTACTGCGTCGTTGGGTTGCCCTTCTGTTTGCCCGGTTCTTGATCCGATTTGGCTCGGAGGAGGAAGGAATCGTGGTTTGCCGGAGCAATCTGGGTAGGCATTTGCTCGAGCGGTTGAGGGGGAGTATTATTTCCCCTCCCTCAAATTCTAGTCTTGTGTTGTTGTGGGTAGTTTCTTGGAGCGACAGTGGTGGTCTCGAGAAAATTTTCGCCACCTTTTTCTTTCTTGGCAATCTGCGCCAAGGTTGAAGTCGTTTCTGATTTCAAGAGGGAACTGAACTACCACTAAATGTTTCAACAGGTTCAGCAAATAGTTTCCTTTAGTGCCCAGTTTAGGTTAGCAATGCGCCAATTCCGAATCACCAAGTCTAATTTGCTTCCGAAGCAACTATAACTAAATTGTGAAGTTCATCCGGGAAAAAAACAGCTATGTATTGATA]
[+] EMBL BI804567             [                                                                                                                                                                                                                                                                                                                               GAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGCTCCGTATCC   TTTTTTTTTTTTTTTTGCTGCTACTGCGTCGTTGGGTTGCCCTTCTGTTTGCCCGGTTCTTGATCCGATTTGGCTCGGAGGAGGAAGGAATCGTGGTTTGCCGGAGCAATCTGGGTAGGCATTTGCTCGAGCGGTTGCGGGGGAGTATTATTTCCCCTCCCTCAAATTCTAGTCTTGTGTTGTTGTGGGTAGTTTCTTGGAGCGACAGTGGTGGTCTCGAGAAAATTTTCGCCACCTTTTTCTTTCTTGGCAATCTGCGCCAAGGTTGAAGTCGTTTCTGATTTCAAGAAGGAACTGAACTACCACTAAATGTTTCAACAGGTTCAGCAAATAGTTTCCTTTAGTGCCCAGTTTAGGTTAGCAATGCGCCAATTCAGAATCACCAAGTCTAATTTGCTTCCGAAGCAACTATAACTAAATTGTGAAGTTCATCCGGGAAAAAAACAGCTAaaaaaaaaa ]


>consensus_11549#1 CGAAGGGGGAGAAAGGGAGGCGACAAAAACTCCACTCTCTCACTCCGGCACAGCACTCCC CCCACCCACCTACCCACGCCGCTCCACACCTCTCGTTTTCACTGCTTGCTGCGAGAGAGA GAGAGAGAGAGAGAGAGAGGAAGAGGAAAAAGGAAGGCGACGCGGCTGTCATCTCTCTCG CCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTACTCGGATCCCGAACCCTCTC CCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGCCAGCGCGTCGGCCTGCCCCA GCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCCCGAGAAGCGCGGCTACAGGC TCCGTATCCTTTTTTTTTTTTTTTTTTTGCTGCTACTGCGTCGTTGGGTTGCCCTTCTGT TTGCCCGGTTCTTGATCCGATTTGGCTCGGAGGAGGAAGGAATCGTGGTTTGCCGGAGCA ATCTGGGTAGGCATTTGCTCGAGCGGTTGAGGGGGAGTATTATTTCCCCTCCCTCAAATT CTAGTCTTGTGTTGTTGTGGGTAGTTTCTTGGAGCGACAGTGGTGGTCTCGAGAAAATTT TCGCCACCTTTTTCTTTCTTGGCAATCTGCGCCAAGGTTGAAGTCGTTTCTGATTTCAAG AGGGAACTGAACTACCACTAAATGTTTCAACAGGTTCAGCAAATAGTTTCCTTTAGTGCC CAGTTTAGGTTAGCAATGCGCCAATTCCGAATCACCAAGTCTAATTTGCTTCCGAAGCAA CTATAACTAAATTGTGAAGTTCATCCGGGAAAAAAACAGCTATGTATTGATA



consensusID : consensus_11549#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 759
fasta sequence
                              [CTTAAGCTTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTTATTCGTTCAACATTGTCAGCTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTACGTGCATTAATGTTATTCAAGGGAATGCTATTTAAAGGACGCCGCAAAACCTGCAAATTGCAAAGAGACACTGGATGTGAGGTGACAAGTGGGTTCTGTCCCTGCACTTCAGTTAGGAACCATTGTTTTAAAGAACTGCAGTGTTTGTAGCATCCTATAACCTATTGCTCTGCCTATGCCAAGATGAACTGGACTGTTGCTGACTTCGTTGATGTCACAGGTTGCAACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTGAGCTTGGCTGTGCATAATCTGTAATTACCATTTGTTNCA]

[-] EMBL CB657883             [CTTAAGCTTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTTATTCGTTCAACATTGTCAGCTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTACGTGCATTAATGTTATTCAAGGGAATGCTATTTAAAGGACGCCGCAAAACCTGCAAATTGCAAAGAGACACTGGATGTGAGGTGACAAGTGGGTTCTGTCCCTGCACTTCAGTTAGGAACCATTGTTTTAAAGAACTGCAGTGTTTGTAGCATCCTATAACCTATTGCTCTGCCTATGCCAAGATGAACTGGACTGTTGCTGACTTCGTTGATGTCACAGGTTGCAACGTTGCAGTCGGTGTTTTAACCATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTGAGCTTGGCTGTGCATAATCTGTAATTACCATTTGTTNCA]


>consensus_11549#2 CTTAAGCTTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCAT TGTTTCTTTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTTATTCGTTCAAC ATTGTCAGCTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTACGTGCATTA ATGTTATTCAAGGGAATGCTATTTAAAGGACGCCGCAAAACCTGCAAATTGCAAAGAGAC ACTGGATGTGAGGTGACAAGTGGGTTCTGTCCCTGCACTTCAGTTAGGAACCATTGTTTT AAAGAACTGCAGTGTTTGTAGCATCCTATAACCTATTGCTCTGCCTATGCCAAGATGAAC TGGACTGTTGCTGACTTCGTTGATGTCACAGGTTGCAACGTTGCAGTCGGTGTTTTAACC ATTTGCAAAAGATTCAGCAAGTTCTACACCCGTTGATTATGCGGGGTGGTCAATCAGCAC AACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTTGGTGGTGATCTGAAACAAGCGGG GAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGACATCATTCTTTTTG GCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATAGCTTTGCAATTGA GCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCCTGTTGTACATGTG AGCTTGGCTGTGCATAATCTGTAATTACCATTTGTTNCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11549#0      CGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATACCAAGTA 60
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      CTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACTCCGCTGC 120
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      CAGCGCGTCGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGGATGGACCC 180
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      CGAGAAGCGCGGCTACAGGCTCCAGGAATTTGTCGCACATGATGCTGAAGTGAGGTCCTT 240
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      GTCTATCGGCAAGAAGTCAAGCCGTGTGTTTATCACTGGCGGCAGCGACCGCAAGGTTAA 300
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      CCTGTGGGCCATTGGCAAACAGACACCACTTCTGAGCTTATCAGGCCACACTGGCTCAGT 360
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TGAGGCTGTTGAGTTTGATACAGCAGAGGTGCTTGTGCTTGCTGGTTCTTCAAATGGTTC 420
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      CATCAAGCTCTGGGACTTGGAAGAGGCTAAAGTTGTGCGGTCTCTTACTGGGCACAGATC 480
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      AAGTTGCACCTCTGTTGAATTCCATCCATTTGGCGAGTTTTTTGCATCTGGTTCTTCAGA 540
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TACAGATCTTAAGATCTGGGATATAAAGAAAAAAGGATGCATTCACACATATAAGGGTCA 600
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      CAGAGGAGCAATTAGAATAATCAGATTTGCACCTGATGGACGATGGGTTGTCACCGGCGG 660
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      AGAAGATAATATTGTAAAAGTGTGGGACTTGACAGCTGGAAAGCTTCTACATGACTTCAA 720
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      GTTCCATAGTGGGCAAATCCGGTGTATTGATTTTCATCCGCAAGAATTTTTGCTTGCAAC 780
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      AGGCTCAGCTGATCGAACAGTTAAGTTTTGGGATCTTGAAACTTTTGAATTGATTGGTTC 840
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TGCTGGACCCGAGGCTACTGGTGTTCGCTCTACGGTCTTTCACCCAGATGGAAAAACCCT 900
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      ATTCTGTGGGTTAGACCAAAGCCTAAAGGTATTCTCTTGGGAGCCAGTAAGATGTCATGA 960
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      CGTTGTTGACATGGGATGGAGCAATTTGGCTGACCTTAGTATTTATGAAGGAAAACTCTT 1020
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      GGGATGCTCCTACCACGAATGCCGAGTTGGTGTTTGGGTTGCTGATATATCGCTCATTGG 1080
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      GCCCTATGCTCTTGGTGTTTTGCCCAAAGCAAATTTCTTTGCTGAGCTGGTACATTCTTT 1140
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      AGACGACAATCCTTCGAAAACGATTGATACCACTGCCAAGTCCATTCCTGCTCTAGCAAC 1200
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      GACACATCCAAAAAATCTGTACAAGGTCAAGGAAACAGGGACTGCTGAAAGTGGAATTCG 1260
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TGGCTCAAATTTGACTCCAGCAAGTATGGATAAAACCAAGAGAGATAAGAGTGGTGCAAC 1320
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TCCTCGAAGACCTGATTCTTCTTTCAAATCATCTATTCAGAGCTCTACTCCAATGAGGCG 1380
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      CATGAAAGCTGCTGATAGTCCATACACAAATAGAAAAACAGTGGAGCGCAATTTTGCACA 1440
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      GAGGGATGCCTCGCTAGCATCCCGTACGGGAACAGCTGATAATTCTTCAACTGTTAAAAA 1500
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      AGGCCATCTTGCTGAGTCAGTATCTGTAAAAGATATTTACACTACACCACAGACTGTTTC 1560
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TGTGCCTGTCGTTATGCCTAGAGACATTTTAGAGGACAAAACAGCAGGCAGCATTAGTGG 1620
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      AGGAATCAGAGGGAGAGCTGCAGTTGCAGATGATTTCCATGCTCCTGTTCATTCAAGGAA 1680
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      ACTTTCAGTTAATAGTTTTGTGGGTGATAGTGTTAACTCAACAAAATCCATGCTAACTGA 1740
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TCCTGATGTTTGCTCTGAGGGTTTCTCTGGCTTAAAATTCTCTTTTGGACTAACTCCATA 1800
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TTACAAGAAAGAAGAATATGATAATGTGGATAAAGTTGATAGTATGGATAAAGGTGATAA 1860
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TACACAAATGACAGAAAAATTGGACAGAACAGTGTCGTTGGAGCATCAACTTCAGTCAAA 1920
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TGATACCTCTGAGCCACCATGTTCTACTACAGAAACAACCAAGGTCAAATATGTCAGAGG 1980
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      AGTTGCTGTGCCATTAGGAAAAACAAAGTCTCTTGTTGAGAGATGGGAAAAGAGAGAGGC 2040
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TACTAATGTTGAGTGCTCACCACCAACTGGTTCTTGTGGTGACCGTGCAGTGAGATCTGA 2100
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      ------------------------------------------------------------
                                                                                   

consensus_11549#0      TGGTCCTTCCTCCTTTTCAGCAGAACCAAGTCAGGCATATGAGAAGGACTTGTCAACAAT 2160
consensus_11549#2      ---------------------------------------CTTAAGCTTTCTGCCTGTTCT 21
consensus_11549#1      -------------------CGAAGGGGGAGAAAGGGAGGCGACAAAAACTCCACT-CTCT 40
                                                                  *         *     *

consensus_11549#0      TGATGAGGCGATG-ATTCCAATCAATTTGATGCAGA-ACCATGATGAATTTATAAATGCC 2218
consensus_11549#2      TGCGGGGTTACTG-A--CCAGCAAGGCTGAAAGGCATGCCATTGTTTCTTTGGAATTGTT 78
consensus_11549#1      CACTCCGGCACAGCACTCCCCCCACCCACCTACCCACGCCGCTCCACACCTCTCGTTTTC 100
                             *     * *  **    *           *  **          *     *   

consensus_11549#0      GTAAAATCTCGGCTGACAAAGTTAGA--GATGATGCGTC--ATGTCTTTGACCAAAATGG 2274
consensus_11549#2      GTTGGATCTTA-TAAAGATCTTTGGACCAGTTATTCGTTCAACATTGTCAGCTCATTCAG 137
consensus_11549#1      ACTGCTTGCTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGAA-------GAGGAAAAAGG 153
                             *        * *      **          *    *            *    *

consensus_11549#0      TA-TCAAAGGAGCGATTGCTGCAGT-GGCAAAGTTGCCTGA--CAATGCTGTTCTAGCTG 2330
consensus_11549#2      CAGTTGGAGTTGATATTCAGGCTG--AGCAGAGGTACGTGCATTAATGTTATTCAAGGGA 195
consensus_11549#1      AAGGCGACGCGGCTGTCATCTCTCTCGCCCCCGCTCCCTTCCCTTCTCCTGCTCAGAATA 213
                        *      *  *   *     *      *   * * * *       *  *  **      

consensus_11549#0      ATGT-TGTTAGTACTCTGAAGGGGAAACTTGATCTCTTCAACCTAGACATTTTCTTAAGC 2389
consensus_11549#2      ATGC-TATTT--------AAAGGACGCCGCAAAACCTGCAAATTGCAAAGAGACACTGGA 246
consensus_11549#1      CCAAGTACTCGGATCCCGAACCCTCTCCCCCCTCTCGTCGTCGACGGCGACACGACGACT 273
                            *  *         **       *       *  *                     

consensus_11549#0      TTTCTGCCTGTTCTTGCGGGGTTACTGACCAGCAAGGCTGAAAGGCATGCCATTGTTTCT 2449
consensus_11549#2      TGTGAG---GTGACAAGTGGGTTCTGTCCCTGCACTTCAGTTAGGAA--CCATTGTTT-T 300
consensus_11549#1      CCGCTGCCAGCGCGT-CGGCCTGCCCCAGCGGCTCGGAGCAGGGGCGGAGAGACGGGAGG 332
                            *   *        *  *       * **          **         *     

consensus_11549#0      TTGGAATTGTTGTTGGATCTTATAAAGATCTTTGGACCAGTATTCGTTCAACATTGTCAG 2509
consensus_11549#2      AAAGAACTGCAGTG----TTTGTAGCATCCTATAACCTATTGCTCTGCCTATGCCA--AG 354
consensus_11549#1      ATGGACCCCGAGAAGCGCGGCTACAGGCTCCGTATCCTTTTTTTTTTTTTTTTTTTGCTG 392
                          **      *                 *  *   *   *  *               *

consensus_11549#0      CTCATTCAGCAGTTGGAGTTGATATTCAGGCTGAGCAGAGGTTGCAACGTTGCAG-TCGG 2568
consensus_11549#2      ATGAACTGG--ACTGTTGCTGACTTCGTTGATGT-CACAGGTTGCAACGTTGCAG-TCGG 410
consensus_11549#1      CT-ACTGCGTCGTTGG-GTTGCCCTTCTGTTTGCCCGGTTCTTGATCCGATTTGGCTCGG 450
                        * *    *    **  * **   *      **  *     ***   ** *   * ****

consensus_11549#0      TGTTTTAACCATTTGCAAAAGATTC-AGCAAGTTCTACACCCGTTGATTATGCGGGGTGG 2627
consensus_11549#2      TGTTTTAACCATTTGCAAAAGATTC-AGCAAGTTCTACACCCGTTGATTATGCGGGGTGG 469
consensus_11549#1      AGGAGGAAGGAATCGTGGTTTGCCGGAGCAATCTGGGTAGGCATTTGCT-CGAGCGGTTG 509
                        *    **  * * *           *****  *    *  * **   *  * * *** *

consensus_11549#0      TCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTT--GGTGGTGATC 2685
consensus_11549#2      TCAATCAGCACAACTTGCCCAAGAACTGAACCTGTCTTTGCAAGACTT--GGTGGTGATC 527
consensus_11549#1      AGGGGGAGTATTATTTCCCCTCCCTCAAATTCTAGTCTTGTGTTGTTGTGGGTAGTTTCT 569
                             ** *  * ** ***     *  *  **    ***      *   *** **    

consensus_11549#0      TGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGAC 2745
consensus_11549#2      TGAAACAAGCGGGGAGGTTCATTCATACTAGTACAACACAGTGAGAGTAGATAACTAGAC 587
consensus_11549#1      TGGAGCGACAGTGGTGGTCT---------------------CGAGAAAATTTTCGCCACC 608
                       ** * * *  * ** ***                        ****  *  *       *

consensus_11549#0      ATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATA 2805
consensus_11549#2      ATCATTCTTTTTGGCAAAAAACGCGCCAGCGCCATACAGTTTTTGTAGCTTGTTGCCATA 647
consensus_11549#1      TTTTTCTTTCTTGGCAATC--TGCGCCAAGGTTGAAG-----TCGTTTCTGATTTCAAGA 661
                        *  *  ** *******     ******  *    *      * **  **  ** * * *

consensus_11549#0      GCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCC 2865
consensus_11549#2      GCTTTGCAATTGAGCTGTGTAATTGTGTTTTGACTTGGCTTTTGATTCGGCGTAGTCCCC 707
consensus_11549#1      G----GGAACTGAACTACCACTAAATGTTTCAACAGGTTCAGCAAATAGTT----TCCTT 713
                       *    * ** *** **         *****  **  *       * * *      ***  

consensus_11549#0      TGTTGTACATGTGAGCTTGGCTGTGCAT-AATCTGTAATTAACATTTGTTACATGGACAG 2924
consensus_11549#2      TGTTGTACATGTGAGCTTGGCTGTGCAT-AATCTGTAATTACCATTTGTTNCA------- 759
consensus_11549#1      TAGTGCCCAGTTTAGGTTAGCAATGCGCCAATTCCGAATCACCAAGTCTAATTTGC---- 769
                       *  **  **  * ** ** **  ***   ***    *** * **  * *           

consensus_11549#0      CCCCGGATGAGGGAGAAGCAAGTTCAAAAATGGTTGATGTCAGTTCAACGTGGTGATTCA 2984
consensus_11549#2      ------------------------------------------------------------
consensus_11549#1      TTCCGAAGCAACTATAACTAAATTGTGAA---GTTCATCCGGGAAAAAAACAGCTATGTA 826
                                                                                   

consensus_11549#0      TTNTCNAAAAAAAAAAAAAAAAAAA 3009
consensus_11549#2      -------------------------
consensus_11549#1      TTGATA------------------- 832
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)