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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11563#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2218 fasta sequence
[CCGTGGTGGACTGCCTGCTTCCACTGAGTTCTAGTCCAGTGCCCTCGATTGATTCTCTCATCTCTCGCGCGCGGAGGGAAGGTCGGGAGGAGGAGGCGCGAGGCATCTCGCCCCAATCTCTGCTCGCCTCTTCGCTCTCGCGGCGTCGGCGGGCGGCGCCGATCGCCGGCGGCGGCGGCGGCGGCGGAGATGTTGGAGGACCAGGTCGCCTTCCTGCTGCAGAAGTACCTCGGCAACTATGTCCGGGGGCTCAGCAAGGAGGCCCTCAAGATCAGCGTGTGGAGAGGTGATGTAGAACTCACGAACATGCAGTTGAAGCCTGAGGCTCTCAATTCATTAAAGTTACCTGTGAGGGTGAAAGCTGGTTTTCTTGGTTCAGTGAAGCTCAAGGTCCCGTGGAGCAGGCTTGGTCAAGAGCCAGTTTTGGTTTATCTTGATCGAATATTTATATTAGCTGAACCAGCAACACAAGTTGAAGGTTGCAGTGAGGATGCCGTTCAAGAGGCAAAAAGGAGTAGAGTCAGGGAAATGGAAATGAAGTTATTGGAGAGCCAACAACAGCTGAAATCTGAACTGAATTCGTCATGGCTTGGGTCTTTCATTAGCACTGTAATTGGAAATATTAAGTTGTCAATTAGCAATATTCATATCAGATATGAGGACACAGAGAGCAATCCAGGCCACCCTTTTGCAGCAGGTTTGGCACTCTCAAAGCTTTCAGCATTTACTGTGGATGATCGTGGAAAGGAGACTTTTGCCACAGGCGGGGATTTGGACCGAGTTAAGAAGTCAGTCGAACTTGAGAGCCTGGCATTGTATTTTGATTCTGATAGCAGTCCTTGGAGTGTGGATAAGTCCTGGGAAGATCTATTACCTTCAGAATGGAGTCAGATTTTTGAGTTCAGAAAGCAGGACAGTTCTAATCCTCCTTCAAAAACACACACTTACATTTTACGACCTATCTCTGGCAAAGCCAAATATACGAAGATACAACTTGATGAAGCAAAGAAAACCGGACAGGCTTTGCAAAATGCAGCTGTTGATTTGGATGACGTTACTTTGTCTTTGTCTAAGGTCTGTACTCTCCCTCTCTCTCTCTCCCTCTGTGCCAATGGCACTGTTGAATGTGTACGCCTTGTTCTTTATATCAGGATGGCTACAGGGACGTCTTGAAGATGGCTGATAATTTTTCTTCTTTTAATCAACGTCTCAAATATGCTCACTACCGGCCATCTTTGCCAGTCAAATCTGACCCAAGGTCTTGGTGGAAGTATGCATACAAGGTGGTGGTTCATGAAACAAAGAAAGCAAGTGGAAATCTATCATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACAAGCTAACTATT]
[+] EMBL AK119266 [CCGTGGTGGACTGCCTGCTTCCACTGAGTTCTAGTCCAGTGCCCTCGATTGATTCTCTCATCTCTCGCGCGCGGAGGGAAGGTCGGGAGGAGGAGGCGCGAGGCATCTCGCCCCAATCTCTGCTCGCCTCTTCGCTCTCGCGGCGTCGGCGGGCGGCGCCGATCGCCGGCGGCGGCGGCGGCGGCGGAGATGTTGGAGGACCAGGTCGCCTTCCTGCTGCAGAAGTACCTCGGCAACTATGTCCGGGGGCTCAGCAAGGAGGCCCTCAAGATCAGCGTGTGGAGAGGTGATGTAGAACTCACGAACATGCAGTTGAAGCCTGAGGCTCTCAATTCATTAAAGTTACCTGTGAGGGTGAAAGCTGGTTTTCTTGGTTCAGTGAAGCTCAAGGTCCCGTGGAGCAGGCTTGGTCAAGAGCCAGTTTTGGTTTATCTTGATCGAATATTTATATTAGCTGAACCAGCAACACAAGTTGAAGGTTGCAGTGAGGATGCCGTTCAAGAGGCAAAAAGGAGTAGAGTCAGGGAAATGGAAATGAAGTTATTGGAGAGCCAACAACAGCTGAAATCTGAACTGAATTCGTCATGGCTTGGGTCTTTCATTAGCACTGTAATTGGAAATATTAAGTTGTCAATTAGCAATATTCATATCAGATATGAGGACACAGAGAGCAATCCAGGCCACCCTTTTGCAGCAGGTTTGGCACTCTCAAAGCTTTCAGCATTTACTGTGGATGATCGTGGAAAGGAGACTTTTGCCACAGGCGGGGATTTGGACCGAGTTAAGAAGTCAGTCGAACTTGAGAGCCTGGCATTGTATTTTGATTCTGATAGCAGTCCTTGGAGTGTGGATAAGTCCTGGGAAGATCTATTACCTTCAGAATGGAGTCAGATTTTTGAGTTCAGAAAGCAGGACAGTTCTAATCCTCCTTCAAAAACACACACTTACATTTTACGACCTATCTCTGGCAAAGCCAAATATACGAAGATACAACTTGATGAAGCAAAGAAAACCGGACAGGCTTTGCAAAATGCAGCTGTTGATTTGGATGACGTTACTTTGTCTTTGTCTAAGGTCTGTACTCTCCCTCTCTCTCTCTCCCTCTGTGCCAATGGCACTGTTGAATGTGTACGCCTTGTTCTTTATATCAGGATGGCTACAGGGACGTCTTGAAGATGGCTGATAATTTTTCTTCTTTTAATCAACGTCTCAAATATGCTCACTACCGGCCATCTTTGCCAGTCAAATCTGACCCAAGGTCTTGGTGGAAGTATGCATACAAGGTGGTGGTTCATGAAACAAAGAAAGCAAGTGGAAATCTATCATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACGAGCTAAC ]
[-] EMBL CB631634 [ TAATCG TGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACAAGCTAACTATT]
[-] EMBL CB631672 [ ATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACAAGCTAACTATT]
[+] EMBL AA749705 [ gagGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATNAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGA CTCCG CTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCAC TG TGTCGATCCCTCTGAA ]
[-] EMBL CB631639 [ TTCTATGTCTTCAGCAGTTTGCAGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTGAAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGGGCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAGAAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTTGGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTGACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACTGAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGAAGAGTCATCTCAATGTAGCCGATGTTATATACCCATGAGATAGATGTGTGCTCATTTTAACGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTACTGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTACAAGCTAACTAT ]
consensusID : consensus_11563#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1370 fasta sequence
[CTCCCCCTCCTCGTTCACGGCGACAACCCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTTTCGAGAGATTCCCCGGCGAGATGGCGCCTCCTCCCCCAAAAGAGCTTCCTGGCTTCTACTACGACCCGGACAAGAACCGCTACTTCCCCATCCGAGGTCCCATCCCCGGCGCCGCCACCCGCCGCCCTGCACCACCGCCTCCTGCCCAACCCCCGCCGCCCCAGGATGCAGCAGCTGGATGCAGGAAGACGGCGAGGCAGCCCGAGCTGGTCCACGCCAGGGAGATGTACGGCGGCGGGGTCATCTTCTCCAACAAGAGGAAGTCCACCTTCATGCGCCAGTGCCAGTACGCACAGGCGTCTCAACCCATGGTTTGGAAGTACAAGGGCACGGCCTTGGTGGCTGACAAAGCACTCGAAGAATTGTATGTGACGATTCAGACACCAATTGGACTGAAAGAATCCAAGGTGCTAGTGACCGGAAGCATGAATGGCATAGTTCGTTTATATGGACTAGGGACTGCTATAGCAAACATCGAGGATGAGATGGAGTTTTTACCTGAACCTGCTTGGACTCCCTTGGTAAAGCAGAATGCACCAGTGAATTCTGCACTTGCAAGCATCTGGTCATCTGAAACAGCTTTCTCAAAATTCTTATCAAGTGTAACCTGCATAAAAAAGCTTCAGCATTGTTTCCCTGGAGCTGACAACACCAATTCCTCAAGCCAGCGAGCATTGGTGGCTACTCTAGGATCTGGAGAATCTGGTGGTTCTATACATATTATGGATCTGTCTGATACTATTGACGTGGCAAGGGGCTCGATGAATGCCTATGGAGGAAATATTATAGGAAATATTATACCGGTTGCTTCATTTAATCGCACAATCTGGACAGCTGATTGTAATTCAGATGGCACACAGGCAGTCATAGGTACAAACAGTGGTGCTGCTTTTTTTGATTTGGAAAGAAGAGCATTATCATGGATGTATCACTGCAAGAGTGACATTCTCTCCCAACAATTTATGCAATCGGGAAATGTTGTGCTATGCGGCTTGAGGAATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGGTGGTTCTCTCATCAGATGAGCACTACTTCTTANGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACAT]
[+] EMBL CB631671 [CTCCCCCTCCTCGTTCACGGCGACAACCCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTTTCGAGAGATTCCCCGGCGAGATGGCGCCTCCTCCCCCAAAAGAGCTTCCTGGCTTCTACTACGACCCGGACAAGAACCGCTACTTCCCCATCCGAGGTCCCATCCCCGGCGCCGCCACCCGCCGCCCTGCACCACCGCCTCCTGCCCAACCCCCGCCGCCCCAGGATGCAGCAGCTGGATGCAGGAAGACGGCGAGGCAGCCCGAGCTGGTCCACGCCAGGGAGATGTACGGCGGCGGGGTCATCTTCTCCAACAAGAGGAAGTCCACCTTCATGCGCCAGTGCCAGTACGCACAGGCGTCTCAACCCATGGTTTGGAAGTACAAGGGCACGGCCTTGGTGGCTGACAAAGCACTCGAAGAATTGTATGTGACGATTCAGACACCAATTGGACTGAAAGAATCCAAGGTGCTAGTGACCGGAAGCATGAATGGCATAGTTCGTTTATATGGACTAGGGACTGCTATAGCAAACATCGAGGATGAGATGGAGTTTTTACCTGAACCTGCTTGGACTCCCTTGGTAAAGCAGAATGCACCAGTGAATTCTGCACTTGCAAGCATCTGGTCATCTGAAACAGCTTTCTCAAAATTCTTATCAAGTGTAACCTGCATAAAAAAGCTTCAGCATTGTTTCCCTGGAGCTGACAACACCAATTCCTCAAGCCAGCGAGCATTGGTGGCTACTCTAGGATCTGGAGAATCTGGTGGTTCTATACATATTATGGATCTGTCTGATACTATTGACGGGGCACGGGG ]
[+] EMBL CB631633 [CTCCCCCTCCTCGTTCACGGCGACAACCCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTTTCGAGAGATTCCCCGGCGAGATGGCGCCTCCTCCCCCAAAAGAGCTTCCTGGCTTCTACTACGACCCGGACAAGAACCGCTACTTCCCCATCCGAGGTCCCATCCCCGGCGCCGCCACCCGCCGCCCTGCACCACCGCCTCCTGCCCAACCCCCGCCGCCCCAGGATGCAGCAGCTGGATGCAGGAAGACGGCGAGGCAGCCCGAGCTGGTCCACGCCAGGGAGATGTACGGCGGCGGGGTCATCTTCTCCAACAAGAGGAAGTCCACCTTCATGCGCCAGTGCCAGTACGCACAGGCGTCTCAACCCATGGTTTGGAAGTACAAGGGCACGGCCTTGGTGGCTGACAAAGCACTCGAAGAATTGTATGTGACGATTCAGACACCAATTGGACTGAAAGAATCCAAGGTGCTAGTGACCGGAAGCATGAATGGCATAGTTCGTTTATATGGACTAGGGACTGCTATAGCAAACATCGAGGATGAGATGGAGTTTTTACCTGAACCTGCTTGGACTCCCTTGGTAAAGCAGAATGCACCAGTGAATTCTGCACTTGCAAGCATCTGGTCATCTGAAACAGCTTTCTCAAAATTCTTATCAAGTGTAACCTGCATAAAAAAGCTTCAGCATTGTTTCCCTGGAGCTGACAACACCAATTCCTCAAGCCAGCGAGCATTGGTGGCTACTCTAGGATCTGGAGAATCTGGTGGTTCTATACATATTATGGATCTGTCTGATACTATTGACGTGGCAA ]
[+] EMBL CF306514 [ agGGAGAATCTGGTGGTTCTATACATATTATGGATCTGTCTGATACTATTGACGTGGCAATGGGCTCGATGAATGCCTATGGAGGAAATATTATAGGAAATATTATACCGGTTGCTTCATTTAATCGCACAATCTGGACAGCTGATTGTAATTCAGATGGCACACAGGCAGTCATAGGTACAAACAGTGGTGCTGCTTTTTTTGATTTGGAAAGAAGAGCATTATCATGGATGTATCACTGCAAGAGTGACATTCTCTCCCAACAATTTATGCAATCGGGAAATGTTGTGCTATGCGGCTTGAGGAATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCAGCTTGGGTGGTTCTCTCATCAGATGAGCACTACTTCTTANGGAGCTCCATGGATGGATCTATCAAGCTATTCGATCTCCGTCTCATTCAGAAAGGGCCTATACAGTCTTATGCAGGGCATATAAATTCACAT]
consensusID : consensus_11563#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence
[CCAAATTCCAAATGATTTTCCCATGTTTTCAGGGAAATGTTGTGCTATGCGGCTTGAGGAATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCANGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTGTAAGTGCATAACTGCATACTAGACTGCTTTTTGCTATGAGCAAGTGTATAAGCGACTGTGTTCCAAATGTCTCTATTGATTTGTTTCAAAGCTGGAATTGTCTGCTCACACCTCAACATATAGTTTAGTAAGATGCCAACTGAAGTTCCATTTGGCCTTTATGCCACTATGAGCTGTTACCTGTACGNTAGTTGTTATCTGTGAAGTTAAGTTGCACCTTTTTTTTTTACTTGTTTCGGCTGCAAACTCAGAACTTGACATGCAATTGCTTCACTT]
[+] EMBL CF310473 [CCAAATTCCAAATGATTTTCCCATGTTTTCAGGGAAATGTTGTGCTATGCGGCTTGAGGAATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCGAGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATCGTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAGTTTGCANGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGATGGATCTGTAAGTGCATAACTGCATACTAGACTGCTTTTTGCTATGAGCAAGTGTATAAGCGACTGTGTTCCAAATGTCTCTATTGATTTGTTTCAAAGCTGGAATTGTCTGCTCACACCTCAACATATAGTTTAGTAAGATGCCAACTGAAGTTCCATTTGGCCTTTATGCCACTATGAGCTGTTACCTGTACGNTAGTTGTTATCTGTGAAGTTAAGTTGCACCTTTTTTTTTTACTTGTTTCGGCTGCAAACTCAGAACTTGACATGCAATTGCTTCACTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 CCGTGGTGGACTGCCTGCTTCCACTGAGTTCTAGTCCAGTGCCCTCGATTGATTCTCTCA 60
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 TCTCTCGCGCGCGGAGGGAAGGTCGGGAGGAGGAGGCGCGAGGCATCTCGCCCCAATCTC 120
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 TGCTCGCCTCTTCGCTCTCGCGGCGTCGGCGGGCGGCGCCGATCGCCGGCGGCGGCGGCG 180
consensus_11563#1 ------------------------------------------CTCCCCCTCCTCGTTCAC 18
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 GCGGCGGAGATGTTGGAGGACCAGGTCGCCTTCCTGCTGCAGAAGTACCTCGGCAACTAT 240
consensus_11563#1 GGCGACAACCCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTTTCGAGAGATTCCCCGGCGA 78
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 GTCCGGGGGCTCAGCAAGGAGGCCCTCAAGATCAGCGTGTGGAGAGGTGATGTAGAACTC 300
consensus_11563#1 GATGGCGCCTCCTCCCCCAAAAGAGCTTCCTGGCTTCTACTACGACCCG-GACAAGAACC 137
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 ACGAACATGCAGTTGAAGCCTGAGGCTCTCAATTCATTAAAGTTACCTGTGAGGGTGAAA 360
consensus_11563#1 GCTACTTCCCCATCCGAGGTCCCATCCCCGGCGCCGCCACCCGCCGCCCTGCACCACCGC 197
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 GCTGGTTTTCTTGGTTCAGTGAAGCTCAAGGTCCCGTGGAGCAGGCTTGGTCAAGAGCCA 420
consensus_11563#1 CTCCTGCCCAACCCCCGCCGCCCCAGGATGCAGCAGCTGGATGCAGGAAGACGGCGAGGC 257
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 GTTTTGGTTTATCTTGATCGAAT--ATTTATATTAGCTGAACCAGCAACACAAGTTGAAG 478
consensus_11563#1 AGCCCGAGCTGGTCCACGCCAGGGAGATGTACGGCGGCGGGGTCATCTTCTCCAACAAGA 317
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 GTTGCAGTGAGGATGCCGTTCAAGAGGCAAAAAGGAGTAGAGTCAGGGAAATGGAAATGA 538
consensus_11563#1 GGAAGTCCACCTTCATGCGCCAGTGCCAGTACGCACAGG---CGTCTCAACCCATGGTTT 374
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 AGTTATTGGAGAGCCAACAACAGCTGAAATCTGAACTGAATTCGTCATGGCTTGGGTCTT 598
consensus_11563#1 GGA--AGTACAAGGGCACGGCCTTGGTGGCTGACAA--AGCACTCGAAGAATTGTATGTG 430
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 TCATTAGCACTGTAATTGGAAATATTAAGTTGTCAATTAGCAATATTCATATCAGATATG 658
consensus_11563#1 ACGATTCAGACACCAATT-GGACTGAAAGAATCCAAGGTGCTAGTGACCG--GAAGCATG 487
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 AGGACACAGAGAGCAATCCAGGCCACCCTTTTGCAGCAGGTTTGGCACTCTCAAAGCTTT 718
consensus_11563#1 AATGGCATAGTTCGTTTATATGGACTAGGGACTGCTATAGCAAACATCGAGGATGAGATG 547
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 CAGCATTTACTGTGGATGATCGTGGAAAGGAGACTTTTGCCACAGGCGGGGATTTGGACC 778
consensus_11563#1 GAGTTTTTACCTGAACCTGCTTGGACTCCCTTGG--TAAAGCAGAATGCACCAGTGAATT 605
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 GAGTTAAGAAGTCAGTCGAACTTGAGAGCCTGGCATTGTATTTTGATTCTGATAGCAGTC 838
consensus_11563#1 CTGCACTTGCAAGCATCTGGTCATCTGAAACAGCTTTCTCAAAATTCTTATCAAGTGTAA 665
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 CTTGGAGTGTGGATAAGTCCTGGGAAGATCTATTACCTTCAGAATGGAGTCAGATTTTTG 898
consensus_11563#1 CCTGCATAAAAAAGCTTCAGCATTGTTTCCCTGGAGCTGACAACACCAATTCCTCAAGCC 725
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 AGTTCAGAAAGCAGGACAGTTCTAATCCTCCTTCAAAAACACACACTTACATTTTACGAC 958
consensus_11563#1 AGCGAGCATTGGTGGCTACTCTAGGATCTGGAGAATCTGGTGGTTCTATACATATTAT-- 783
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 CTATCTCTGGCAAAGCCAAATATACGAAGATACAACTTGATGAAGCAAAGAAAACCGGAC 1018
consensus_11563#1 -GGATCTGTCTGATAC---TATTGACGTGGC--AAGGGGCTCGATGAATGCCTATGGAGG 837
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 AGGCTTTGCAAAATGCAGCTGTTGATTTGGATGACGTTACTTTGTCTTTGTCTAAGGTCT 1078
consensus_11563#1 AAATATTATAGGAAATATTATACCGGTTGCTTCATTTAATCGCACAATCTGGACAGCTGA 897
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 GTACTCTCCCTCTCTCTCTCTCCCTCTGTGCCAATGGCACTGTTGAATGTGTACGCCTTG 1138
consensus_11563#1 TTGTA---ATTCAGATGGCACACAGGCAGTCATAGGTACAAACAGTGGTGCTGCTTTTTT 954
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 TTCTTTATATCAGGATGGCTACAGGGACGTCTTGAAGATGGCTGATAATTTTTCTTCTTT 1198
consensus_11563#1 TGAT-----TTGGAAAGAAGAGCATTATCATGGATGTATCACTG-CAAGAGTGAC--ATT 1006
consensus_11563#2 -------------------------------------------C-CAAATTCCAA--ATG 14
consensus_11563#0 TAATCAACGTCTCAAATATGCTCACTACCGGCCATCTTTGCCAGTCAAATCTGACCCAAG 1258
*** * *
consensus_11563#1 CTCTCCCAACAATTTATGCAATCGGGAAATGTTGTGCTATGCG------GCTTGAGGAA- 1059
consensus_11563#2 ATTTTCCCATGTTTT------CAGGGAAATGTTGTGCTATGCG------GCTTGAGGAA- 61
consensus_11563#0 GTCTTGGTGGAAGTATGCATACAAGGTGGTGGTTCATGAAACAAAGAAAGCAAGTGGAAA 1318
* * * ** ** * * * ** * ****
consensus_11563#1 -------TGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCG 1112
consensus_11563#2 -------TGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCG 114
consensus_11563#0 TCTATCATGGGAGCATATTTCCTCTTGATGTACGGCAAAAGCAACATAATCGTCCTACCG 1378
*****************************************************
consensus_11563#1 AGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATC 1172
consensus_11563#2 AGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATC 174
consensus_11563#0 AGCTAGCTTCACCTGGTACTGCTAGGAGGACTATTCCCCTGACACCCAGAAGGCATAATC 1438
************************************************************
consensus_11563#1 GTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAG 1232
consensus_11563#2 GTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAG 234
consensus_11563#0 GTTGGAGAAATCAGGCTGATAACGCTAAATCTTCAAGAGCTATTTCTATGTCTTCAGCAG 1498
************************************************************
consensus_11563#1 TTTGCAGCTTGGGTGGTTCTCTCATCAGATGAGCACTACTTCTTANGGAGCTCCATGGAT 1292
consensus_11563#2 TTTGCANGCTTGGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGAT 294
consensus_11563#0 TTTGCAGCTT-GGTGGTTCTCTCATCAGATGAGCACTACTTCTTAGGGAGCTCCATGGAT 1557
****** * ********************************** **************
consensus_11563#1 GGATCTATCAA-GC---------TATTCGATCTCCGTCT-CATTCAGAAAGGGCCTATAC 1341
consensus_11563#2 GGATCTGTAAGTGCATAACTGCATACTAGACTGCTTTTTGCTATGAGCAAGTGTATAAGC 354
consensus_11563#0 GGATCTATCAA-GC---------TATTCGATCTCCGTCT-CATTCAGAAAGGGCCTATAC 1606
****** * * ** ** * ** * * * * * ** *** * ** *
consensus_11563#1 AGTCTTATGCAGGGCATATAAATTCACAT------------------------------- 1370
consensus_11563#2 GACTGTGTTCCAAATGTCTCTATTGATTTGTTTCAAAGCTGGAATTGTCTGCTCACACCT 414
consensus_11563#0 AGTCTTATGCAGGGCATATAAATTCACATACTCATTTACCACTTGTTGTCGATCCCTCTG 1666
* * * * * *** * *
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 CAACATATAGTTTAGTAAGATGCCAACTGAAGTTCCATTTGGCCTTTA-TGCCACTATGA 473
consensus_11563#0 AAACCCTTCTTATGTCAGGTGGGGAAGACAGAATGGTTCGAATTTGGAGTATAAAAACGG 1726
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 GCTGTTACCTGTACGNTAGTTGTTATCTGTGAAGTTAAGTTGCACCTTTTTTTTTTACTT 533
consensus_11563#0 GCGAGCAAATATTTGCACAGAGTGTGGCTGGTTCACTATTCACGGCACTTTGCTGGCCAG 1786
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 GTTTCGGCTGCAAACTCAGAACTTGACATGCAATTGCTTCACTT---------------- 577
consensus_11563#0 AAAGCGGCTGCGACTTGCACAATTCTTCGCTGTTCGGTGTAAATCACAGTTGGGGGGCTT 1846
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 GGATGGGATCGCGTGATGGTCTGTTCTATGTGCATGGTACTTAAGCGACTGATGGTACTG 1906
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 ACTCAAGCCATGATGGCTCTACTGGTGTTATGTACATAAGCATATAAGGAGCGATGGACT 1966
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 GAGTTCTTTGCTGCTGGAGAGTTGACGCTAACGTTACTGGAGCTGTGTGCACTGATGAGA 2026
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 AGAGTCATCTCAATGTAGCCGATGTTATATAACCATGAGATAGATGTGTGCTCATTTTAA 2086
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 CGTTTTTTTCTTTTTAATCTTATTATGATGATAGATTCTTAGGTCATGGGTGAGAGGTAC 2146
consensus_11563#1 ------------------------------------------------------------
consensus_11563#2 ------------------------------------------------------------
consensus_11563#0 TGGGAGCTATGTTCAGCATCATGTATGTGTTGAACCGCTTGTATTTTCGGTTATCCTTAC 2206
consensus_11563#1 ------------
consensus_11563#2 ------------
consensus_11563#0 AAGCTAACTATT 2218
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||