cluster # 11564

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Oryza sativa
cluster # 11564 cluster # 11564 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11564#0 length = 2604 sequences # 5
consensus_11564#1 length = 1294 sequences # 1

consensus_11564#2 length = 1018 sequences # 1
consensus_11564#3 length = 1012 sequences # 2

consensusID : consensus_11564#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2604
fasta sequence

                              [GTTTCAGAAATTCAGAGTCCTATAGCTCTGCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGCTCGGATCGTCGTCGNCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACCGTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTCAAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGTTAATCGGCACAATGGATAGCGTTCGAGGACTCCCGAGGGAGCTCACTGAGAGGCTTATCCAAGAAGTTCTTGGAGCCAAATGATTTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGACGCGCTGGTATTGTGAATCAGTGAATGCTTGTTTTCTATCGATCCCAGTAACACGGGGGCGATTAGCTCAATGGGAATTTATCAATTAGAGAATTTTACGAGTGAAAACGTGCGTCTCACTTCTTTTGTAGTGTTATAGGGCTCTTTGATTTGATTTTAACTACAAAACAATCTCAAATAACCTGTCTCCACTGTTATCCATGTAAATACACTTTGAAAAAAAGTCCGAATAACCCCTCTCCGTGGAAAACGTTGTTGATCTTTATCTTGCCATACATGTACAAAAAATATTGATGCTTACACGAAAATTTAGGTGACATTTTCCCTAAAAAAGTTTAGACATTTTCCCCTTGATGATGAACTCGTTGCACCTTCCTTGGTCGAACTGTAATCACATTGCCTTCACCTCGATCCCTCTTTGGTGGACGAGGGAGCACCTTGGCCCTCGTATTGGGTGGAACAAGCTGACAGAGATTATCCATCTTGAGGTGCTTGAATATATCAGACCCTATCAGGGATGGAGGACCCGAATGGCGCCAAGGAGGAAGGCGCCAAGCCGACACAAACTCGCAAGTCGTCATGTCAACGCTGAAGACGTGCAGGCTCCTGTGCTTCTCATCCTCCTCGTAGAAATCACCCGCCATGAGATACACGACGCCGTCCTCCTCGCTGCTCAACATGGGCTGGGTCGGCGACGTGTTCGTCGGCAACCCTGATCTCCTGAACCCCTCCTGCTCCCACAAGCTCCCAACATGGATACTACCAACCTTGTGCCACTGCCTTGAGCTCGGCGTCAAATCCCACATGGATAATAGCATGTCGTATGGAGGATCGGTGTTGTATCCCTCGATGGAGACGAATCTGATGGAGTCACTGATGCAACGGATATCACGATACTGTGACGGCAGATGAGTGAGATAGAGCGAGTCGCAACCAACGTAGCAACCATCGGGTAATTGGATGTAACCAAATTGCAAATCGTCGTCGTCGTTGTTGTTGATGTTGTTGGTACCAGACATGAGATCATGGCAGCTGCAGAAGAGGATGCCTTGTCCAAGATCCACCCAGTAAGCAGAGCCTTGGAATGAGAAGGTTTGATGAGCGGTGAAACTCTTTGGCTTCTCGGAGGGGAAGATTGGCCTTCTGGTTCCCCAGCGACGGCGGTCGAATGGTGCCGATGACGGCAGAAGGCAGAGGACTTGCGGTAGATACCCGTCAGCCTCTGCATCGGCGTCCATGTCCATTGCAAAGATGGCAAGGAGGTAGCCGCCGCCATCGGCGTCGGGTTGTTGCCGGACGGGGTGCGGGCAGTAGGTCACAGACGGGAGAAACCTCATCGGAAGAGTCGGGAGCATCTTGAGCGAGGCGGCATTGTCCGCGGCGGCGACGTCGCAGACGAGGTAGGATTTGTGGCCGCGCGTGTCGGGGAGGCAGGAGGAGAGCACGATGAACCCGGCGTCGGCGAGCAGGACGCTGCTGCGGAAGCCGCGGCGGTCCTCCTCCTCCGGGTCGCCGTCGAGGCGGATGGACAGGCGGGAGGGCCGGGGGGGGATCGGCGACGAGCGCGAGCAGCTTCAGGCCGTCGTCGAACGGCGCTAGCTCGTCGACGGGGCGCAGGCCCTCGACGTTCGCGCGGAGCGTGACGTAGGCCGTCGTCTCGCACCTGATGGTTGCCCACCCCGGGTCCTCCTCCTCCTCGTCGTCCGGTTTGTGGAGAAAGGCGTTGCGATCCAGCACCACCCAAGGTGGCAAAGAGCGCGCCGCCGCCATGGCTGATCTACGCTCGGTTTCGGACAAAGACGTAATGTCTTTTGAGCCTACAAATTCGTTCTCGTAAGTCGTAACTACTCCATTATTTTAGCAA]

[+] EMBL CF336973             [GTTTCAGAAATTCAGAGTCCTATAGCTCTGCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGCTCGGATCGTCGTCGNCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACCGTCATGTGCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK064412             [ TTTCAGAAATTCAGAGTCCTATAGCTCTGCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGCTCGGATCGTCGTCGCCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACCGTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTCAAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGTTAATCGGCACAATGGATAGCGTTCGAGGACTCCCGAGGGAGCTCACTGAGAGGCTTATCCAAGAAGTTCTTGGAGCCAAATGATTTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGACGCGCTGGTATTGTGAATCAGTGAATGCTTGTTTTCTATCGATCCCAGTAACACGGGGGCGATTAGCTCAATGGGAATTTATCAATTAGAGAATTTTACGAGTGAAAACGTGCGTCTCACTTCTTTTGTAGTGTTATAGGGCTCTTTGATTTGATTTTAACTACAAAACAATCTCAAATAACCTGTCTCCACTGTTATCCATGTAAATACACTTTGAAAAAAAGTCCGAATAACCCCTCTCCGTGGAAAACGTTGTTGATCTTTATCTTGCCATACATGTACAAAAAATATTGATGCTTACACGAAAATTTAGGTGACATTTTCCCTAAAAAAGTTTAGACATTTTCCCCTTGATGATGAACTCGTTGCACCTTCCTTGGTCGAACTGTAATCACATTGCCTTCACCTCGATCCCTCTTTGGTGGACGAGGGAGCACCTTGGCCCTCGTATTGGGTGGAACAAGCTGACAGAGATTATCCATCTTGAGGTGCTTGAATATATCAGACCCTATCAGGGATGGAGGACCCGAATGGCGCCAAGGAGGAAGGCGCCAAGCCGACACAAACTCGCAAGTCGTCATGTCAACGCTGAAGACGTGCAGGCTCCTGTGCTTCTCATCCTCCTCGTAGAAATCACCCGCCATGAGATACACGACGCCGTCCTCCTCGCTGCTCAACATGGGCTGGGTCGGCGACGTGTTCGTCGGCAACCCTGATCTCCTGAACCCCTCCTGCTCCCACAAGCTCCCAACATGGATACTACCAACCTTGTGCCACTGCCTTGAGCTCGGCGTCAAATCCCACATGGATAATAGCATGTCGTATGGAGGATCGGTGTTGTATCCCTCGATGGAGACGAATCTGATGGAGTCACTGATGCAACGGATATCACGATACTGTGACGGCAGATGAGTGAGATAGAGCGAGTCGCAACCAACGTAGCAACCATCGGGTAATTGGATGTAACCAAATTGCAAATCGTCGTCGTCGTTGTTGTTGATGTTGTTGGTACCAGACATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF317514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCCAAAGGAGGATGGGATATACCTGAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGTTAATCGGCACAATGGATAGCGTTCGAGGACTCCCGAGGGAGCTCACTGAGAGGCTTATTCAAGAAGTTCTTGGAGCCAAATGATTTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGACGCGCTGGTATTGTGAATCAGTGAATGCTTGTTTTCTATCGATCCCAGTAACACGAGGGCGATTAGCTCAATGGGAATTTAAAAAAAAGAGAATTTTACGAGTGAAAACGTGCGTCTCACTTCTTTTGTAGTGTTATAGGGTTCTTTGATTTGATTTTAACTACAAAACAATCTCAAATAACCTGTCTCCACTGTTTTCCATGTAAATACACGTTGAAATAAAGTCCGAAAAAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL AK106785             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CACTGTTATCCTTGTAAATACACTTTGAAAAAAAGTCCGAATAACCCCTCTCCGTGGAAAACGTTGTTGATCTTTATCTTGCCATACATGTACAAAAAATATTGATGCTTACACGAAAATTTAGGTGACATTTTCCCTAAAAAAGTTTAGACATTTTCCCCTTGATGATGAACTCGTTGCACCTTCCTTGGTCGAACTGTAATCACATTGCCTTCACCTCGATCCCTCTTTGGTGGACGAGGGAGCACCTTGGCCCTCATATTGGGTGGAACAAGCTGACAGAGATTATCCATCTTGAGGTGCTTGAATATATCAGACCCTATCAGGGATGGAGGACCCGAATGGCGCCAAGGAGGAAGGCGCCAAGCCGACACAAACTCGCAAGTCGTCATGTCAACGCTGAAGACGTGCAGGCTCCTGTGCTTCTCATCCTCCTCGTAGAAATCACCCGCCATGAGATACACGACGCCGTCCTCCTCGCTGCTCAACATGGGCTGGGTCGGCGACGTGTTCGTCGGCAACCCTGATCTCCTGAACCCCTCCTGCTCCCACAAGCTCCCAACATGGATACTACCAACCTTGTGCCACTGCCTTGAGCTCGGCGTCAAATCCCACATGGATAATAGCATGTCGTATGGAGGATCGGTGTTGTATCCCTCGATGGAGACGAATCTGATGGAGTCACTGATGCAACGGATATCACGATACTGTGACGGCAGATGAGTGAGATAGAGCGAGTCGCAACCAACGTAGCAACCATCGGGTAATTGGATGTAACCAAATTGCAAATCGTCGTCGTCGTTGTTGTTGATGTTGTTGGTACCAGACATGAGATCATGGCAGCTGCAGAAGAGGATGCCTTGTCCAAGATCCACCCAGTAAGCAGAGCCTTGGAATGAGAAGGTTTGATGAGCGGTGAAACTCTTTGGCTTCTCGGAGGGGAAGATTGGCCTTCTGGTTCCCCAGCGACGGCGGTCGAATGGTGCCGATGACGGCAGAAGGCAGAGGACTTGCGGTAGATACCCGTCAGCCTCTGCATCGGCGTCCATGTCCATTGCAAAGATGGCAAGGAGGTAGCCGCCGCCATCGGCGTCGGGTTGTTGCCGGACGGGGTGCGGGCAGTAGGTCACAGACGGGAGAAACCTCATCGGAAGAGTCGGGAGCATCTTGAGCGAGGCGGCATTGTCCGCGGCGGCGACGTCGCAGACGAGGTAGGATTTGTGGCCGCGCGTGTCGGGGAGGCAGGAGGAGAGCACGATGAACCCGGCGTCGGCGAGCAGGACGCTGCTGCGGAAGCCGCGGCGGTCCTCCTCCTCCGGGTCGCCGTCGAGGCGGATGGACAGGCGGGAGGGCCGGGGGGGGATCGGCGACGAGCGCGAGCAGCTTCAGGCCGTCGTCGAACGGCGCTAGCTCGTCGACGGGGCGCAGGCCCTCGACGTTCGCGCGGAGCGTGACGTAGGCCGTCGTCTCGCACCTGATGGTTGCCCACCCCGGGTCCTCCTCCTCCTCGTCGTCCGGTTTGTGGAGAAAGGCGTTGCGATCCAGCACCACCCAAGGTGGCAAAGAGCGCGCCGCCGCCATGGCTGATCTACGCTCGGTTTCGGACAAAGACGTAATGTCTTTTGAGCCTACAAATTCGTTCTCGTAAGTCGTAACTACTCCATTATTTTAGCAA]
[-] EMBL CA756431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGAGGAAGGCGCCAAGCCGACACAAACTCGCAAGTCGTCATGTCAACGCTGAAGACGTGCAGGCTCCTGTGCTTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_11564#0
GTTTCAGAAATTCAGAGTCCTATAGCTCTGCGATGAGTTCAGCCATGGCGTCTTCCATGG
CCAAGAACTCCTCGCCTTTCAAGGTCGTGCTCGGATCGTCGTCGNCGGCGCGCCGCGAGA
TACTGGCGGACATGGGATACGAGTTCACCGTCATGTGCGCTGACATCGATGAGAGGGCCA
TCAGGAGGGAGAAGCCAGAGGAGCTTGTCAAGGCCCTCGCTGAAGCTAAGGCAGAGGCCA
TCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACTATTCTGA
TCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGG
AAGAAGCCAGGGAGTTCATCAAGGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATG
TTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGATCT
ATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCT
GCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGTTAA
TCGGCACAATGGATAGCGTTCGAGGACTCCCGAGGGAGCTCACTGAGAGGCTTATCCAAG
AAGTTCTTGGAGCCAAATGATTTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCA
TTGCTAAATGGACCGTACGACGCGCTGGTATTGTGAATCAGTGAATGCTTGTTTTCTATC
GATCCCAGTAACACGGGGGCGATTAGCTCAATGGGAATTTATCAATTAGAGAATTTTACG
AGTGAAAACGTGCGTCTCACTTCTTTTGTAGTGTTATAGGGCTCTTTGATTTGATTTTAA
CTACAAAACAATCTCAAATAACCTGTCTCCACTGTTATCCATGTAAATACACTTTGAAAA
AAAGTCCGAATAACCCCTCTCCGTGGAAAACGTTGTTGATCTTTATCTTGCCATACATGT
ACAAAAAATATTGATGCTTACACGAAAATTTAGGTGACATTTTCCCTAAAAAAGTTTAGA
CATTTTCCCCTTGATGATGAACTCGTTGCACCTTCCTTGGTCGAACTGTAATCACATTGC
CTTCACCTCGATCCCTCTTTGGTGGACGAGGGAGCACCTTGGCCCTCGTATTGGGTGGAA
CAAGCTGACAGAGATTATCCATCTTGAGGTGCTTGAATATATCAGACCCTATCAGGGATG
GAGGACCCGAATGGCGCCAAGGAGGAAGGCGCCAAGCCGACACAAACTCGCAAGTCGTCA
TGTCAACGCTGAAGACGTGCAGGCTCCTGTGCTTCTCATCCTCCTCGTAGAAATCACCCG
CCATGAGATACACGACGCCGTCCTCCTCGCTGCTCAACATGGGCTGGGTCGGCGACGTGT
TCGTCGGCAACCCTGATCTCCTGAACCCCTCCTGCTCCCACAAGCTCCCAACATGGATAC
TACCAACCTTGTGCCACTGCCTTGAGCTCGGCGTCAAATCCCACATGGATAATAGCATGT
CGTATGGAGGATCGGTGTTGTATCCCTCGATGGAGACGAATCTGATGGAGTCACTGATGC
AACGGATATCACGATACTGTGACGGCAGATGAGTGAGATAGAGCGAGTCGCAACCAACGT
AGCAACCATCGGGTAATTGGATGTAACCAAATTGCAAATCGTCGTCGTCGTTGTTGTTGA
TGTTGTTGGTACCAGACATGAGATCATGGCAGCTGCAGAAGAGGATGCCTTGTCCAAGAT
CCACCCAGTAAGCAGAGCCTTGGAATGAGAAGGTTTGATGAGCGGTGAAACTCTTTGGCT
TCTCGGAGGGGAAGATTGGCCTTCTGGTTCCCCAGCGACGGCGGTCGAATGGTGCCGATG
ACGGCAGAAGGCAGAGGACTTGCGGTAGATACCCGTCAGCCTCTGCATCGGCGTCCATGT
CCATTGCAAAGATGGCAAGGAGGTAGCCGCCGCCATCGGCGTCGGGTTGTTGCCGGACGG
GGTGCGGGCAGTAGGTCACAGACGGGAGAAACCTCATCGGAAGAGTCGGGAGCATCTTGA
GCGAGGCGGCATTGTCCGCGGCGGCGACGTCGCAGACGAGGTAGGATTTGTGGCCGCGCG
TGTCGGGGAGGCAGGAGGAGAGCACGATGAACCCGGCGTCGGCGAGCAGGACGCTGCTGC
GGAAGCCGCGGCGGTCCTCCTCCTCCGGGTCGCCGTCGAGGCGGATGGACAGGCGGGAGG
GCCGGGGGGGGATCGGCGACGAGCGCGAGCAGCTTCAGGCCGTCGTCGAACGGCGCTAGC
TCGTCGACGGGGCGCAGGCCCTCGACGTTCGCGCGGAGCGTGACGTAGGCCGTCGTCTCG
CACCTGATGGTTGCCCACCCCGGGTCCTCCTCCTCCTCGTCGTCCGGTTTGTGGAGAAAG
GCGTTGCGATCCAGCACCACCCAAGGTGGCAAAGAGCGCGCCGCCGCCATGGCTGATCTA
CGCTCGGTTTCGGACAAAGACGTAATGTCTTTTGAGCCTACAAATTCGTTCTCGTAAGTC
GTAACTACTCCATTATTTTAGCAA

consensusID : consensus_11564#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1294
fasta sequence

                              [GGCGTTTCAGAAATTCAGAGTCCTATAGCTCTGCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGCTCGGATCGTCGTCGCCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACCGTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTCAAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGGTATATCTATCTCAAATCTCTGCTTAGGAATTGTACCAGTAAATTTGTTGTATTTAGCTAAAAAGTTTTGGCTGTGTGTTTCGCTGCTATTGGTAGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGTTAGTGAGCAATTCTTTCGAAACAACCACCATTGCTAGTATTACTACTCTTAGAACGGCCAATCTGTACTGGACAGTGTCACTGCAACGTCTGAACAACAATAATATCGAATCCATTGCTCTGATTTTGAGATTTCTTCCTATGTTGCATAGATCGGCACAATGGATAGCGTTCGAGGACTCCCGAGGGAGCTCACTGAGAGGCTTATTCAAGAAGTTCTTGGAGCCAAATGATTTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGACGCGCTGGTATTGTGAATCAGTGAATGCTTGTTTTCTATCGATCCCAGTAACACGAGGGCGATTAGCTCAATGGGAATTTATCAATTAGAGAATTTTACGAGTGAAAACGTGCGTCTCACTTCTTTTGTAGTGTTATAGGGTTCTTTGATTTGATTTTAACTACAAAACAATCTCAAATAACCTGTCTCCACTGTTATCCATGTAAATACACTTTGAAAAAAAGTCCGAATAACCCCTCTCCGTGGAAAACGTTGTTGATCTTTATCTTGCCATACATGTACAAAAAATATTGATGCTTACACGAA]

[+] EMBL AK106475             [GGCGTTTCAGAAATTCAGAGTCCTATAGCTCTGCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGCTCGGATCGTCGTCGCCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACCGTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTCAAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGGTATATCTATCTCAAATCTCTGCTTAGGAATTGTACCAGTAAATTTGTTGTATTTAGCTAAAAAGTTTTGGCTGTGTGTTTCGCTGCTATTGGTAGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGTTAGTGAGCAATTCTTTCGAAACAACCACCATTGCTAGTATTACTACTCTTAGAACGGCCAATCTGTACTGGACAGTGTCACTGCAACGTCTGAACAACAATAATATCGAATCCATTGCTCTGATTTTGAGATTTCTTCCTATGTTGCATAGATCGGCACAATGGATAGCGTTCGAGGACTCCCGAGGGAGCTCACTGAGAGGCTTATTCAAGAAGTTCTTGGAGCCAAATGATTTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGACGCGCTGGTATTGTGAATCAGTGAATGCTTGTTTTCTATCGATCCCAGTAACACGAGGGCGATTAGCTCAATGGGAATTTATCAATTAGAGAATTTTACGAGTGAAAACGTGCGTCTCACTTCTTTTGTAGTGTTATAGGGTTCTTTGATTTGATTTTAACTACAAAACAATCTCAAATAACCTGTCTCCACTGTTATCCATGTAAATACACTTTGAAAAAAAGTCCGAATAACCCCTCTCCGTGGAAAACGTTGTTGATCTTTATCTTGCCATACATGTACAAAAAATATTGATGCTTACACGAA]




>consensus_11564#1
GGCGTTTCAGAAATTCAGAGTCCTATAGCTCTGCGATGAGTTCAGCCATGGCGTCTTCCA
TGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGCTCGGATCGTCGTCGCCGGCGCGCCGCG
AGATACTGGCGGACATGGGATACGAGTTCACCGTCATGTGCGCTGACATCGATGAGAGGG
CCATCAGGAGGGAGAAGCCAGAGGAGCTTGTCAAGGCCCTCGCTGAAGCTAAGGCAGAGG
CCATCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACTATTC
TGATCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCC
AGGAAGAAGCCAGGGAGTTCATCAAGGGTATATCTATCTCAAATCTCTGCTTAGGAATTG
TACCAGTAAATTTGTTGTATTTAGCTAAAAAGTTTTGGCTGTGTGTTTCGCTGCTATTGG
TAGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCA
ATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGATCTATTTTCACCACATACCAGAGG
ATTTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGC
TGACACATCCTTCGGTGCTGCCATTCATCAAGCAGTTAGTGAGCAATTCTTTCGAAACAA
CCACCATTGCTAGTATTACTACTCTTAGAACGGCCAATCTGTACTGGACAGTGTCACTGC
AACGTCTGAACAACAATAATATCGAATCCATTGCTCTGATTTTGAGATTTCTTCCTATGT
TGCATAGATCGGCACAATGGATAGCGTTCGAGGACTCCCGAGGGAGCTCACTGAGAGGCT
TATTCAAGAAGTTCTTGGAGCCAAATGATTTGCATCTAGAGTGTCACTTGCAACTTGCAA
GAAGGGCATTGCTAAATGGACCGTACGACGCGCTGGTATTGTGAATCAGTGAATGCTTGT
TTTCTATCGATCCCAGTAACACGAGGGCGATTAGCTCAATGGGAATTTATCAATTAGAGA
ATTTTACGAGTGAAAACGTGCGTCTCACTTCTTTTGTAGTGTTATAGGGTTCTTTGATTT
GATTTTAACTACAAAACAATCTCAAATAACCTGTCTCCACTGTTATCCATGTAAATACAC
TTTGAAAAAAAGTCCGAATAACCCCTCTCCGTGGAAAACGTTGTTGATCTTTATCTTGCC
ATACATGTACAAAAAATATTGATGCTTACACGAA

consensusID : consensus_11564#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1018
fasta sequence

                              [AACAGAAACCAACCAGCTTTTACGTGGTGAGATCAACCCTAATCCCCTCATGATATGCTATTATAATCTCTTGAGTGGGATACTACTTGGGATGCAAGGAAGCAACAAGTACTTAATTCGGTTAGAATTTGTAGCCTCCGATCATGCAGGCGTTTCAGAAATTCAGAGTCCTATAGCTCTGCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGCTCGGATCGTCGTCGCCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACCGTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTCAAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGGTAGCTGCACATTCATAATCTGAGCTTTTAGTTATGTGGTTATGCACATAGTGATGACGGCTGCGAATTTGATCTCGAGTTTGTTTTGAGTTCAACTGAAATGATCTATACCAAATCATCAAATCGGTGCATGTTTTGGTTTCTGCAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGTACTTCTTAATTCAATTAGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGTTAGTGAGCAATTCTTTCGAAACAACCACCATTGCTAGTATTACTACTCTTAGAACGGCCAATCTGTACTGGACAGTGTCACTGCAACGTCTGAACAACAATAA]

[+] EMBL AK108518             [AACAGAAACCAACCAGCTTTTACGTGGTGAGATCAACCCTAATCCCCTCATGATATGCTATTATAATCTCTTGAGTGGGATACTACTTGGGATGCAAGGAAGCAACAAGTACTTAATTCGGTTAGAATTTGTAGCCTCCGATCATGCAGGCGTTTCAGAAATTCAGAGTCCTATAGCTCTGCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGCTCGGATCGTCGTCGCCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACCGTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTCAAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGGTAGCTGCACATTCATAATCTGAGCTTTTAGTTATGTGGTTATGCACATAGTGATGACGGCTGCGAATTTGATCTCGAGTTTGTTTTGAGTTCAACTGAAATGATCTATACCAAATCATCAAATCGGTGCATGTTTTGGTTTCTGCAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGTACTTCTTAATTCAATTAGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGTTAGTGAGCAATTCTTTCGAAACAACCACCATTGCTAGTATTACTACTCTTAGAACGGCCAATCTGTACTGGACAGTGTCACTGCAACGTCTGAACAACAATAA]




>consensus_11564#2
AACAGAAACCAACCAGCTTTTACGTGGTGAGATCAACCCTAATCCCCTCATGATATGCTA
TTATAATCTCTTGAGTGGGATACTACTTGGGATGCAAGGAAGCAACAAGTACTTAATTCG
GTTAGAATTTGTAGCCTCCGATCATGCAGGCGTTTCAGAAATTCAGAGTCCTATAGCTCT
GCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTG
CTCGGATCGTCGTCGCCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACC
GTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTC
AAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCT
GCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAA
GGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGGGTAT
TCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAATGGAGCT
TCCAAAGGAGGATGGGATATACCTGAGGTAGCTGCACATTCATAATCTGAGCTTTTAGTT
ATGTGGTTATGCACATAGTGATGACGGCTGCGAATTTGATCTCGAGTTTGTTTTGAGTTC
AACTGAAATGATCTATACCAAATCATCAAATCGGTGCATGTTTTGGTTTCTGCAGATCTA
TTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGTACTTCTTAATTCAATTAGGTGA
AGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGC
CATTCATCAAGCAGTTAGTGAGCAATTCTTTCGAAACAACCACCATTGCTAGTATTACTA
CTCTTAGAACGGCCAATCTGTACTGGACAGTGTCACTGCAACGTCTGAACAACAATAA

consensusID : consensus_11564#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1012
fasta sequence

                              [ANTTCGCTTAGAATTTGTAGCCTCCGATCATGTAGGCGNNTCAGAAATNCAGAGTCCTATAGCTCTNCGGTGCGTTCAGCCATGGCGCCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGNTCGGATCGTCGTCGCCGNCGNGCCGCGNGATACTGGCGAACATGGGATACGAGTTCACCGTCATGTGCGNTNACATCNATGNGAGGGCCATCAGNAGGGAGAAGCCAGAGGAGCTTNTCAAGGCCCTCGTTGAAGNTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACCATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGAAGTTCATCAAGGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGCTAATCGGCACAATGGATAGCGTTCGAGGACTCCCGAGGGAGCTCACTGAGAGGCTTATTCAAGAAGTTCTTGGAGCCAAATGATTTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGACGCGCTGGTATTGTGAATCAGTGAATGCTTGTTTCTATCGATCCCAGTACACGAGGGCGATTAGCTCAATGGGAATTAATAATTAGAGAATCTTACGAGTGANANAANAAGATNATATNNTTTATATATTATAATCTCCCCGTGGGGGCCGGACTCTATTAACCTTATGTGAGGCGTTAACTCACATCCCTGCGGGGGTGTTTATGGCAACCCATCTTGCCGGGGTGGACGCGCT]

[+] EMBL OSC101291            [ANTTCGCTTAGAATTTGTAGCCTCCGATCATGTAGGCGNNTCAGAAATNCAGAGTCCTATAGCTCTNCGGTGCGTTCAGCCATGGCGCCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTGNTCGGATCGTCGTCGCCGNCGNGCCGCGNGATACTGGCGAACATGGGATACGAGTTCACCGTCATGTGCGNTNACATCNATGNGAGGGCCATCAGNAGGGAGAAGCCAGAGGAGCTTNTCAAGGCCCTCGTTGAAGNTAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BE040325             [                                                                                                                                                                                                                            ggAGGGAGAAGCCAGAGGAGCTTGTCAAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCTGCTCAAGAGAGAGATCAGCCTACCATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGAAGTTCATCAAGGGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCTGAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCATCAAGCAGCTAATCGGCACAATGGATAGCGTTCGAGGACTCCCGAGGGAGCTCACTGAGAGGCTTATTCAAGAAGTTCTTGGAGCCAAATGATTTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGACGCGCTGGTATTGTGAATCAGTGAATGCTTGTTTCTATCGATCCCAGTACACGAGGGCGATTAGCTCAATGGGAATTAATAATTAGAGAATCTTACGAGTGANANAANAAGATNATATNNTTTATATATTATAATCTCCCCGTGGGGGCCGGACTCTATTAACCTTATGTGAGGCGTTAACTCACATCCCTGCGGGGGTGTTTATGGCAACCCATCTTGCCGGGGTGGACGCGCT]




>consensus_11564#3
ANTTCGCTTAGAATTTGTAGCCTCCGATCATGTAGGCGNNTCAGAAATNCAGAGTCCTAT
AGCTCTNCGGTGCGTTCAGCCATGGCGCCTTCCATGGCCAAGAACTCCTCGCCTTTCAAG
GTCGTGNTCGGATCGTCGTCGCCGNCGNGCCGCGNGATACTGGCGAACATGGGATACGAG
TTCACCGTCATGTGCGNTNACATCNATGNGAGGGCCATCAGNAGGGAGAAGCCAGAGGAG
CTTNTCAAGGCCCTCGTTGAAGNTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAA
GACTCTGCTCAAGAGAGAGATCAGCCTACCATTCTGATCACCTCTGACCAGGTCATGGTG
AGCAAAGGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGAAGTTCATCAAG
GGGTATTCGGGTGATAAAGCATTCGCAGTGAACTATGTTCTTGTGACTAACCTAAGCAAT
GGAGCTTCCAAAGGAGGATGGGATATACCTGAGATCTATTTTCACCACATACCAGAGGAT
TTCATCCAAAGTGTGGTGAAGGAAGGACACATGACCTGCGTGGCTGGAGGCCTTAAGCTG
ACACATCCTTCGGTGCTGCCATTCATCAAGCAGCTAATCGGCACAATGGATAGCGTTCGA
GGACTCCCGAGGGAGCTCACTGAGAGGCTTATTCAAGAAGTTCTTGGAGCCAAATGATTT
GCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGACGC
GCTGGTATTGTGAATCAGTGAATGCTTGTTTCTATCGATCCCAGTACACGAGGGCGATTA
GCTCAATGGGAATTAATAATTAGAGAATCTTACGAGTGANANAANAAGATNATATNNTTT
ATATATTATAATCTCCCCGTGGGGGCCGGACTCTATTAACCTTATGTGAGGCGTTAACTC
ACATCCCTGCGGGGGTGTTTATGGCAACCCATCTTGCCGGGGTGGACGCGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11564#0      ------------------------------------------------------------
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      AACAGAAACCAACCAGCTTTTACGTGGTGAGATCAACCCTAATCCCCTCATGATATGCTA 60
                                                                                   

consensus_11564#0      ------------------------------------------------------------
consensus_11564#3      ------------------------------------------------------ANTTCG 6
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      TTATAATCTCTTGAGTGGGATACTACTTGGGATGCAAGGAAGCAACAAGTACTTAATTCG 120
                                                                                   

consensus_11564#0      -------------------------------GTTTCAGAAATTCAGAGTCCTATAGCTCT 29
consensus_11564#3      CTTAGAATTTGTAGCCTCCGATCATGTAGGCGNNTCAGAAATNCAGAGTCCTATAGCTCT 66
consensus_11564#1      ----------------------------GGCGTTTCAGAAATTCAGAGTCCTATAGCTCT 32
consensus_11564#2      GTTAGAATTTGTAGCCTCCGATCATGCAGGCGTTTCAGAAATTCAGAGTCCTATAGCTCT 180
                                                      *  ******** *****************

consensus_11564#0      GCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTG 89
consensus_11564#3      NCGGTGCGTTCAGCCATGGCGCCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTG 126
consensus_11564#1      GCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTG 92
consensus_11564#2      GCGATGAGTTCAGCCATGGCGTCTTCCATGGCCAAGAACTCCTCGCCTTTCAAGGTCGTG 240
                        ** ** ************** **************************************

consensus_11564#0      CTCGGATCGTCGTCGNCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACC 149
consensus_11564#3      NTCGGATCGTCGTCGCCGNCGNGCCGCGNGATACTGGCGAACATGGGATACGAGTTCACC 186
consensus_11564#1      CTCGGATCGTCGTCGCCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACC 152
consensus_11564#2      CTCGGATCGTCGTCGCCGGCGCGCCGCGAGATACTGGCGGACATGGGATACGAGTTCACC 300
                        ************** ** ** ****** ********** ********************

consensus_11564#0      GTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTC 209
consensus_11564#3      GTCATGTGCGNTNACATCNATGNGAGGGCCATCAGNAGGGAGAAGCCAGAGGAGCTTNTC 246
consensus_11564#1      GTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTC 212
consensus_11564#2      GTCATGTGCGCTGACATCGATGAGAGGGCCATCAGGAGGGAGAAGCCAGAGGAGCTTGTC 360
                       ********** * ***** *** ************ ********************* **

consensus_11564#0      AAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCT 269
consensus_11564#3      AAGGCCCTCGTTGAAGNTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCT 306
consensus_11564#1      AAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCT 272
consensus_11564#2      AAGGCCCTCGCTGAAGCTAAGGCAGAGGCCATCAAACTGAAGTTGCATGGGGAAGACTCT 420
                       ********** ***** *******************************************

consensus_11564#0      GCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAA 329
consensus_11564#3      GCTCAAGAGAGAGATCAGCCTACCATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAA 366
consensus_11564#1      GCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAA 332
consensus_11564#2      GCTCAAGAGAGAGATCAGCCTACTATTCTGATCACCTCTGACCAGGTCATGGTGAGCAAA 480
                       *********************** ************************************

consensus_11564#0      GGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGG---- 385
consensus_11564#3      GGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGAAGTTCATCAAGGG---- 422
consensus_11564#1      GGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGGTATA 392
consensus_11564#2      GGGATGATAAGGGAGAGGCCAAAAGGCCAGGAAGAAGCCAGGGAGTTCATCAAGGG---- 536
                       ****************************************** *************    

consensus_11564#0      ------------------------------------------------------------
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      TCTATCTCAAATCTCTGCTTAGGAATTGTACCAGTAAATTTGTTGTATTTAGCTAAAAAG 452
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      --------------------------------GTATTCGGGTGATAAAGCATTCGCAGTG 413
consensus_11564#3      --------------------------------GTATTCGGGTGATAAAGCATTCGCAGTG 450
consensus_11564#1      TTTTGGCTGTGTGTTTCGCTGCTATTGGTAGGGTATTCGGGTGATAAAGCATTCGCAGTG 512
consensus_11564#2      --------------------------------GTATTCGGGTGATAAAGCATTCGCAGTG 564
                                                       ****************************

consensus_11564#0      AACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCT 473
consensus_11564#3      AACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCT 510
consensus_11564#1      AACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCT 572
consensus_11564#2      AACTATGTTCTTGTGACTAACCTAAGCAATGGAGCTTCCAAAGGAGGATGGGATATACCT 624
                       ************************************************************

consensus_11564#0      GAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACAC 533
consensus_11564#3      GAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACAC 570
consensus_11564#1      GAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGGTGAAGGAAGGACAC 632
consensus_11564#2      GAGGTAGCTGCACATT-CATAATCTGAGCTTTTAGTTA---TGTGGTTATGCACATAGTG 680
                       *** *   *   **   ****      * *** *   *   ****** * * *   *   

consensus_11564#0      ATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCAT--CA 591
consensus_11564#3      ATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCAT--CA 628
consensus_11564#1      ATGACCTGCGTGGCTGGAGGCCTTAAGCTGACACATCCTTCGGTGCTGCCATTCAT--CA 690
consensus_11564#2      ATGACGGCTGCGAATTTGATCTCGAGTTTGTTTTGAGTTCAACTGAAATGATCTATACCA 740
                       *****    * *  *     *   *   **        *    **     **  **  **

consensus_11564#0      AGCAGTTA---------------------------------------------------- 599
consensus_11564#3      AGCAGCTA---------------------------------------------------- 636
consensus_11564#1      AGCAGTTAGTGAGCAATTCTTTCGAAACAACCACCATTGCTAGTATTACTACTCTTAGAA 750
consensus_11564#2      AATCATCAA--------------------------------------------------- 749
                       *      *                                                    

consensus_11564#0      ------------------------------------------------------------
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      CGGCCAATCTGTACTGGACAGTGTCACTGCAACGTCTGAACAACAATAATATCGAATCCA 810
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      -------------------------------------ATCGGCACAATGGATAGCGTTCG 622
consensus_11564#3      -------------------------------------ATCGGCACAATGGATAGCGTTCG 659
consensus_11564#1      TTGCTCTGATTTTGAGATTTCTTCCTATGTTGCATAGATCGGCACAATGGATAGCGTTCG 870
consensus_11564#2      -------------------------------------ATCGGTGCATGTTTTGGTTTCTG 772
                                                            *****  **     * *  *  *

consensus_11564#0      AGGA-CTCCCGAGGGAGCTCACTGAGAGGCTTATCCAAGAAGTTCTTGGAGCCAAATGAT 681
consensus_11564#3      AGGA-CTCCCGAGGGAGCTCACTGAGAGGCTTATTCAAGAAGTTCTTGGAGCCAAATGAT 718
consensus_11564#1      AGGA-CTCCCGAGGGAGCTCACTGAGAGGCTTATTCAAGAAGTTCTTGGAGCCAAATGAT 929
consensus_11564#2      CAGATCTATTTTCACCACATACCAGAGGATTTCATCCAAAGTGTGTACTTCTTAATTCAA 832
                         ** **          *  **     *  **   * * *   * *       ** * * 

consensus_11564#0      TTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGAC 741
consensus_11564#3      TTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGAC 778
consensus_11564#1      TTGCATCTAGAGTGTCACTTGCAACTTGCAAGAAGGGCATTGCTAAATGGACCGTACGAC 989
consensus_11564#2      TTAGGTGAAGGAAGG-ACACATGACCTGCGTGGCTGGAGGCCTTAAGCTGAC---AC-AT 887
                       **   *  **   *  **     ** ***  *   **      ***   ***   ** * 

consensus_11564#0      GCGCTGGTATTGTGAATCAGTGAATGCTTGTTTTCTATCGATCCCAGTAACACGGGGGCG 801
consensus_11564#3      GCGCTGGTATTGTGAATCAGTGAATGCTTGTTT-CTATCGATCCCAGTA-CACGAGGGCG 836
consensus_11564#1      GCGCTGGTATTGTGAATCAGTGAATGCTTGTTTTCTATCGATCCCAGTAACACGAGGGCG 1049
consensus_11564#2      CCTTCGGTGCTGCCATTCATCAAGCAGTTAGTG---AGCAATTCTTTCGAAACAACCACC 944
                        *   ***  **  * ***   *    **  *    * * ** *       **     * 

consensus_11564#0      ATTAGCTCAATGGGAATTTATCAATTAGAGAATTTTACGAGTGAAAACGTGCGTCTCACT 861
consensus_11564#3      ATTAGCTCAATGGGAATTAAT-AATTAGAGAATCTTACGAGTGANANAANAAGA-TNATA 894
consensus_11564#1      ATTAGCTCAATGGGAATTTATCAATTAGAGAATTTTACGAGTGAAAACGTGCGTCTCACT 1109
consensus_11564#2      ATTGCTAGTATTACTACTCTTAGAACGGCCAATCT---GTACTGGACAGTGTCA-CTGCA 1000
                       ***      **    * *  *  *   *  *** *   *      *              

consensus_11564#0      TCTTTTGTAGTGTTATAGGGCTCTTTGATTTGATTTTAACTACAAAACAATCTCAAATAA 921
consensus_11564#3      TNNTTTATA-TATTATAAT-CTCCCCG-TGGGGGCCGGACTCTAT--TAACCTTATGTGA 949
consensus_11564#1      TCTTTTGTAGTGTTATAGGGTTCTTTGATTTGATTTTAACTACAAAACAATCTCAAATAA 1169
consensus_11564#2      ACGTCTGAACAACAATAA------------------------------------------ 1018
                          * *  *     ***                                           

consensus_11564#0      CCTGTCTCCACTGTTATCCATGTAAATACACTTTGAAAAAAAGTCCGAATAACCCCTCTC 981
consensus_11564#3      G--GCGTTAACTCACATCCCTGCGGGGGTGTTT---ATGGCAACCCA-------TCTTGC 997
consensus_11564#1      CCTGTCTCCACTGTTATCCATGTAAATACACTTTGAAAAAAAGTCCGAATAACCCCTCTC 1229
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      CGTGGAAAACGTTGTTGATCTTTATCTTGCCATACATGTACAAAAAATATTGATGCTTAC 1041
consensus_11564#3      CGGGGTGGACGCGCT--------------------------------------------- 1012
consensus_11564#1      CGTGGAAAACGTTGTTGATCTTTATCTTGCCATACATGTACAAAAAATATTGATGCTTAC 1289
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      ACGAAAATTTAGGTGACATTTTCCCTAAAAAAGTTTAGACATTTTCCCCTTGATGATGAA 1101
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ACGAA------------------------------------------------------- 1294
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      CTCGTTGCACCTTCCTTGGTCGAACTGTAATCACATTGCCTTCACCTCGATCCCTCTTTG 1161
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GTGGACGAGGGAGCACCTTGGCCCTCGTATTGGGTGGAACAAGCTGACAGAGATTATCCA 1221
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      TCTTGAGGTGCTTGAATATATCAGACCCTATCAGGGATGGAGGACCCGAATGGCGCCAAG 1281
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GAGGAAGGCGCCAAGCCGACACAAACTCGCAAGTCGTCATGTCAACGCTGAAGACGTGCA 1341
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GGCTCCTGTGCTTCTCATCCTCCTCGTAGAAATCACCCGCCATGAGATACACGACGCCGT 1401
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      CCTCCTCGCTGCTCAACATGGGCTGGGTCGGCGACGTGTTCGTCGGCAACCCTGATCTCC 1461
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      TGAACCCCTCCTGCTCCCACAAGCTCCCAACATGGATACTACCAACCTTGTGCCACTGCC 1521
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      TTGAGCTCGGCGTCAAATCCCACATGGATAATAGCATGTCGTATGGAGGATCGGTGTTGT 1581
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      ATCCCTCGATGGAGACGAATCTGATGGAGTCACTGATGCAACGGATATCACGATACTGTG 1641
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      ACGGCAGATGAGTGAGATAGAGCGAGTCGCAACCAACGTAGCAACCATCGGGTAATTGGA 1701
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      TGTAACCAAATTGCAAATCGTCGTCGTCGTTGTTGTTGATGTTGTTGGTACCAGACATGA 1761
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GATCATGGCAGCTGCAGAAGAGGATGCCTTGTCCAAGATCCACCCAGTAAGCAGAGCCTT 1821
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GGAATGAGAAGGTTTGATGAGCGGTGAAACTCTTTGGCTTCTCGGAGGGGAAGATTGGCC 1881
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      TTCTGGTTCCCCAGCGACGGCGGTCGAATGGTGCCGATGACGGCAGAAGGCAGAGGACTT 1941
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GCGGTAGATACCCGTCAGCCTCTGCATCGGCGTCCATGTCCATTGCAAAGATGGCAAGGA 2001
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GGTAGCCGCCGCCATCGGCGTCGGGTTGTTGCCGGACGGGGTGCGGGCAGTAGGTCACAG 2061
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      ACGGGAGAAACCTCATCGGAAGAGTCGGGAGCATCTTGAGCGAGGCGGCATTGTCCGCGG 2121
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      CGGCGACGTCGCAGACGAGGTAGGATTTGTGGCCGCGCGTGTCGGGGAGGCAGGAGGAGA 2181
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GCACGATGAACCCGGCGTCGGCGAGCAGGACGCTGCTGCGGAAGCCGCGGCGGTCCTCCT 2241
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      CCTCCGGGTCGCCGTCGAGGCGGATGGACAGGCGGGAGGGCCGGGGGGGGATCGGCGACG 2301
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      AGCGCGAGCAGCTTCAGGCCGTCGTCGAACGGCGCTAGCTCGTCGACGGGGCGCAGGCCC 2361
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      TCGACGTTCGCGCGGAGCGTGACGTAGGCCGTCGTCTCGCACCTGATGGTTGCCCACCCC 2421
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GGGTCCTCCTCCTCCTCGTCGTCCGGTTTGTGGAGAAAGGCGTTGCGATCCAGCACCACC 2481
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      CAAGGTGGCAAAGAGCGCGCCGCCGCCATGGCTGATCTACGCTCGGTTTCGGACAAAGAC 2541
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      GTAATGTCTTTTGAGCCTACAAATTCGTTCTCGTAAGTCGTAACTACTCCATTATTTTAG 2601
consensus_11564#3      ------------------------------------------------------------
consensus_11564#1      ------------------------------------------------------------
consensus_11564#2      ------------------------------------------------------------
                                                                                   

consensus_11564#0      CAA 2604
consensus_11564#3      ---
consensus_11564#1      ---
consensus_11564#2      ---