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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11570#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3184 fasta sequence
[CCAAGGAGAAGCCATTCCATTCCCCCCCACCGACCAGTGGCCGCCGCACCACGCCGTCTCCGATCATCTCCCTGAGCCGGCGAAGCCGCTGAGCTAGGGGAGGGCGCCACCGGGAGGCGGCATGACCATCCTGGTCTGGATCCTGAGGGAGAATGGGTATAATATTCCACCTCAGTCCTCAGTCCCGCCCGGAGCCACGGCCCGCGGCACATGGACGACCTAGCCGGCGGCGAGGGATGGTGCCGTTTTGTCGCCGTCGTTGGGGGCGACCACGAACCTGGAAGCGGGAGTGGCGCAGTCGTCTCCGAGGTCTCGAGTTCGATCTATTTGTCACCGAGAAAATTGGAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCCAACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGGGACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGGAAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGTGGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAGTCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGAGAGTGAGTACCCTGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGTCTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGATGGTTAGCCTCCCCTTCCATCTCAGCTCACCATGGGTCCCATTTCTCTGTTGAATCCTTGAATTTGAAAATAGTTTAATTACTGCAATATTAATTACTTTGCTGGTGCCAATTGGTAGTTTGGTACTGTACTACTGATTATTTTGGAACCATCACTGTAATTTTTTTTTATATATGAAAAAGGCAGAAGCTCTGCCTAGTCAATTAAGAAGAACAGAAAGAAACATACATAGAGGTTCTCAGTTACAATTTGGAAGAAACTAATTAAAAAACTAAGGACAGAATGTGCATACCACCAATCTTTTTTGTACAGAATGTGCCAGTTGGATCTTTCCATCAAGGCTAAATCATGAGCAAACAATTTTCCATGAATTGACCCTCTTTGATCATAGTCCCATCCTAGCAAGATGGATTGGCCATCCGATGATGATAATGCCTCAGTGTTTTCAGTGAATTGAATTAATGGGGGTATGGCTTCTTCTGCTTGAGACATTCAGTTTGTTCAGATACTAATAACTATTGCTTTTAGTTTACTTTCTTACCCTCAATTTGCTTTTATGATTGTTTAGTTGTGAATAGTACTTCAGTTTGCAGACAATATGATCAGATCAAACTTGATGGAAGTCACTCGGCATTACTGCTGCTGGCAAGAGAGTAGAGAGTAGAGAAAAGGGAAACAGGTCAGACTAGAGAGTACCCTAGTTTATTGTAAAGTCACTGCTGGCCAGGATCGTAGGACTGCAGCAGATATGTGATCCATTTGCAGAAGTGGAGATGACACGTCTTGCTGTAGTTGTCCTGTGACAATAAGCCTAAGGAGTTTTTACAAAATTGTGGCATGGTGCTCTCTTCAGATTGTAGTTAAACAGTTTCCAAGGAATCATACTATTAATCTGATCTTCAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTGGTTGTAGATTAATGTCTTAGTTTGCAAAAACTGAGCAGATTAAACTTGGTGGAAGTCACTTGGCACAAGTGCTGCTAGCAAGGGAAACGAGGAACACTAGAGATTTGAGTACCCGCCCAGTACAATTTATAGCCACTGCTGGAACTAGATGTTGGAAGGGTAGTCTTTTGGGTAGGATCCAAAAGACCCCTGCACATATATGATCCTGGAATATGCACGTATAAGCCTCTAGTGGTGCAGTCCTCTCCAAGGTCTCTGGCGTGTTGTCGGGCAATGCCTACGATCCCGAAGTTCTCTGCCTGTTAGTCTCCCTTTCCATCTCGGCTTACCATGGGAGAACCTGGCCTTTAGATTGTGCACTCATAATGTTGAATTCGGTAATATCCTAAACAAAATCAATTTTCTCTCTGTTGAATACGTCAATTCGGTCATGTTTAGATTACTTCAATATTAATTAGTGTACTGATGCCAAATAGTTCTGAACTACTGATCATTTTGGAAGCCACGACTGTTTTTTTCGAAGATAAAAAATGGTAGGTGCTCTACCTTTCCATCAAGGCCAAATCATGAGCAAACAATTTGCCATGTATGAATGAAGAATTGACACTATTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAAGCAGGCAAGTTAAATTTCATAGCCATCCCATGAGGCCATGATGGTAATGCCTTAGTTTTATCAGTGAGATGTTCTTCTGCCTCAGATGTTCAGTTTGCTCAGATACTAATAGCTCTTTTTTTAGTTTACTTACTCACCCTCAATTTGCTTTTATGTTTGTTTAATTATAGATAGTACTTCAGTTTGCAGAAGATGATCAGATCAAACTTGGTGGAAATCACTCAGCACAAGTGCTGCTGACAAGAGAGTAGACAGTAGAAAAACAGGCCAGGCACATATTCCAGAAGTACCCCAGTACAATGTAAAGCAACTGCTGGCTAGGATCAGTAGGACTGCAGCACATATATGATACATCTGCAGAAGTGGAGTTCACACATCTTGCTGGAGTTGGCCTGTACACAAGACGCCTACTAAGTTTCTAGAAAATTGTGATTAATCTGTTTCGAAGGAATCATACTGTTAATGGGTGTGCAGGAATCGTTCTCTTGTTGTATTGGAGCCTGCAAATAGTTGTACATTCTTAGAGATGCCAGCTGTTTTTTTTTTTTGTACAGTCTTAAGTAATTGTAAATGTAATGTAAGATGTAATTGTCAATATGCATCCTGGTGCCTGGTGACATGAATTAGGGGAGCTGCAGCACTGTAAATTGATGCAAGAGAAGTGCCAGGGTTCCAGTGGCACTCATGTTATCTGAAGTGGCTGTTCTATGTT]
[+] EMBL AK106862 [CCAAGGAGAAGCCATTCCATTCCCCCCCACCGACCAGTGGCCGCCGCACCACGCCGTCTCCGATCATCTCCCTGAGCCGGCGAAGCCGCTGAGCTAGGGGAGGGCGCCACCGGGAGGCGGCATGACCATCCTGGTCTGGATCCTGAGGGAGAATGGGTATAATATTCCACCTCAGTCCTCAGTCCCGCCCGGAGCCACGGCCCGCGGCACATGGACGACCTAGCCGGCGGCGAGGGATGGTGCCGTTTTGTCGCCGTCGTTGGGGGCGACCACGAACCTGGAAGCGGGAGTGGCGCAGTCGTCTCCGAGGTCTCGAGTTCGATCTATTTGTCACCGAGAAAATTGGAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCCAACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGGGACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGGAAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGTGGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAGTCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGAGAGTGAGTACCCTGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGTCTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGATGGTTAGCCTCCCCTTCCATCTCAGCTCACCATGGGTCCCATTTCTCTGTTGAATCCTTGAATTTGAAAATAGTTTAATTACTGCAATATTAATTACTTTGCTGGTGCCAATTGGTAGTTTGGTACTGTACTACTGATTATTTTGGAACCATCACTGTAATTTTTTTTTATATATGAAAAAGGCAGAAGCTCTGCCTAGTCAATTAAGAAGAACAGAAAGAAACATACATAGAGGTTCTCAGTTACAATTTGGAAGAAACTAATTAAAAAACTAAGGACAGAATGTGCATACCACCAATCTTTTTTGTACAGAATGTGCCAGTTGGATCTTTCCATCAAGGCTAAATCATGAGCAAACAATTTTCCATGAATTGACCCTCTTTGATCATAGTCCCATCCTAGCAAGATGGATTGGCCATCCGATGATGATAATGCCTCAGTGTTTTCAGTGAATTGAATTAATGGGGGTATGGCTTCTTCTGCTTGAGACATTCAGTTTGTTCAGATACTAATAACTATTGCTTTTAGTTTACTTTCTTACCCTCAATTTGCTTTTATGATTGTTTAGTTGTGAATAGTACTTCAGTTTGCAGACAATATGATCAGATCAAACTTGATGGAAGTCACTCGGCATTACTGCTGCTGGCAAGAGAGTAGAGAGTAGAGAAAAGGGAAACAGGTCAGACTAGAGAGTACCCTAGTTTATTGTAAAGTCACTGCTGGCCAGGATCGTAGGACTGCAGCAGATATGTGATCCATTTGCAGAAGTGGAGATGACACGTCTTGCTGTAGTTGTCCTGTGACAATAAGCCTAAGGAGTTTTTACAAAATTGTGGCATGGTGCTCTCTTCAGATTGTAGTTAAACAGTTTCCAAGGAATCATACTATT ]
[+] EMBL AK119280 [ AGGAGAAGCCATTCCATTCCCCCCCACCGACCAGTGGCCGCCGCACCACGCCGTCTCCGATCATCTCCCTGAGCCGGCGAAGCCGCTGAGCTAGGGGAGGGCGCCACCGGGAGGCGGCATGACCATCCTGGTCTGGATTCTGAGGGAGAATGGGTATAATATTCCACCTCAGTCCTCAGTCCCGCCCGGAGCCACGGCCCGCGGCACATGGACGACCTAGCCGGCGGCGAGGGATGGTGCCGTTTTGTCGCCGTCGTTGGGGGCGACCACGAACCTGGAAGCGGGAGTGGCGCAGTCGTCTCCGAGGTCTCGAGTTCGATCTATTTGTCACCGAGAAAATTGGAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCCAACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGGGACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGGAAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGTGGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAGTCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGAGAGTGAGTACCCTGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGTCTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGATGGTTAGCCTCCCCTTCCATCTCAGCTCACCATGGGTCCCATTTCTCTGTTGAATCCTTGAATTTGAAAATAGTTTAATTACTGCAATATTAATTACTTTGCTGGTGCCAATTGGTAGTTTGGTACTGTACTACTGATTATTTTGGAACCATCACTGTAATTTTTTTTTATATATGAAAAAGGCAGAAGCTCTGCCTAGTCAATTAAGAAGAACAGAAAGAAACATACATAGAGGTTCTCAGTTACAATTTGGAAGAAACTAATTAAAAAACTAAGGACAGAATGTGCATACCACCAATCTTTTTTGTACAGAATGTGCCAGTTGGATCTTTCCATCAAGGCTAAATCATGAGCAAACAATTTTCCATGAATTGACCCTCTTTGATCATAGTCCCATCCTAGCAAGATGGATTGGCCATCCGATGATGATAATGCCTCAGTGTTTTCAGTGAATTGAATTAATGGGGGTATGGCTTCTTCTGCTTGAGACATTCAGTTTGTTCAGATACTAATAACTATTGCTTTTAGTTTACTTTCTTACCCTCAATTTGCTTTTATGATTGTTTAGTTGTGAATAGTACTTCAGTTTGCAGACAATATGATCAGATCAAACTTGATGGAAGTCACTCGGCATTACTGCTGCTGGCAAGAGAGTAGAGAGTAGAGAAAAGGGAAACAGGTCAGACTAGAGAGTACCCTAGTTTATTGTAAAGTCACTGCTGGCCAGGATCGTAGGACTGCAGCAGATATGTGATCCATTTGCAGAAGTGGAGATGACACGTCTTGCTGTAGTTGTCCTGTGACAATAAGCCTAAGGAGTTTTTACAAAATTGTGGCATGGTGCTCTCTTCAGATTGTAGTTAAACAGTTTCCAAGGAATCATACTATTAATCTGATCTTCAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTGGTTGTAGATTAATGTCTTAGTTTGCAAAAACTGAGCAGATTAAACTTGGTGGAAGTCACTTGGCACAAGTGCTGCTAGCAAGGGAAACGAGGAACACTAGAGATTTGAGTACCCGCCCAGTACAATTTATAGCCACTGCTGGAACTAGATGTTGGAAGGGTAGTCTTTTGGGTAGGATCCAAAAGACCCCTGCACATATATGATCCTGGAATATGCACGTATAAGCCTCTAGTGGTGCAGTCCTCTCCAAGGTCTCTGGCGTGTTGTCGGGCAATGCCTACGATCCCGAAGTTCTCTGCCTGTTAGTCTCCCTTTCCATCTCGGCTTACCATGGGAGAACCTGGCCTTTAGATTGTGCACTCATAATGTTGAATTCGGTAATATCCTAAACAAAATCAATTTTCTCTCTGTTGAATACGTCAATTCGGTCATGTTTAGATTACTTCAATATTAATTAGTGTACTGATGCCAAATAGTTCTGAACTACTGATCATTTTGGAAGCCACGACTGTTTTTTTCGAAGATAAAAAATGGTAGGTGCTCTACCTTTCCATCAAGGCCAAATCATGAGCAAACAATTTGCCATGTATGAATGAAGAATTGACACTATTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAAGCAGGCAAGTTAAATTTCATAGCCATCCCATGAGGCCATGATGGTAATGCCTTAGTTTTATCAGTGAGATGTTCTTCTGCCTCAGATGTTCAGTTTGCTCAGATACTAATAGCTCTTTTTTTAGTTTACTTACTCACCCTCAATTTGCTTTTATGTTTGTTTAATTATAGATAGTACTTCAGTTTGCAGAAGATGATCAGATCAAACTTGGTGGAAATCACTCAGCACAAGTGCTGCTGACAAGAGAGTAGACAGTAGAAAAACAGGCCAGGCACATATTCCAGAAGTACCCCAGTACAATGTAAAGCAACTGCTGGCTAGGATCAGTAGGACTGCAGCACATATATGATACATCTGCAGAAGTGGAGTTCACACATCTTGCTGGAGTTGGCCTGTACACAAGACGCCTACTAAGTTTCTAGAAAATTGTGATTAATCTGTTTCGAAGGAATCATACTGTTAATGGGTGTGCAGGAATCGTTCTCTTGTTGTATTGGAGCCTGCAAATAGTTGTACATTCTTAGAGATGCCAGCTGTTTTTTTTTTTTGTACAGTCTTAAGTAATTGTAAATGTAATGTAAGATGTAATTGTCAATATGCATCCTGGTGCCTGGTGACATGAATTAGGGGAGCTGCAGCACTGTAAATTGATGCAAGAGAAGTGCCAGGGTTCCAGTGGCACTCATGTTATCTGAAGTGGCTGTTCTATGTT]
[+] EMBL CF306625 [ GGCGCAGTCGTCTCCGAGGTCTCGAGTTCGATCTATTTGTCACCGAGAAAATTGGAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCCAACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGGGACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGGAAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGTGGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAGTCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGAGAGTGAGTACCCTGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCT ]
[+] EMBL CA764003 [ TGCAGGAACTCCTGCGCATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGTCTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGATGGTTAGCCTCCCCTTCCATCTCAGCTCACCATGGGTCCCATTTCTCTGTTGAATCCTTGAATTTGAAAATAGTTTAATTACTGCAATATTAATTACTTTGCTGGTGCCAATTGGTAGTTTGGTACTGTACTACTGATTATTTTGGAACCATCACTGTGATTTTTTTTTATATATGAAAAAGGCAGAAGCTCTGCCTA ]
consensusID : consensus_11570#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2560 fasta sequence
[TACTCCCCACCGGCCAGTGGCCGCCGCGCCGTCGTCCGCCGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGGAGGGCTCCAGCATGGTCCGGCGAGGAGCCACGACCCGCGGCACATCGACATATCGGCGGCGGGAATGGTGTGCTTTGTCGCCGTCGTGGGGGGGCACGGCCTGGAAGCGGATCTCCATTGCCGCAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAATTGGAGCTCGAACAGCCATGGCGGAACCCGTGGGCGAACGAGCAATGCCCCCCAACCCCGGCGTCACAGCAAGGTCCTGACGATGTTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGGTGGGGCATCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTAATTTTAGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAACAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAATTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTTATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTTTGCAGAAGATGTTCATATCAAACTTGGTGTAAGTCACTCGGCACAAGTGCTGCTGGCAAGATAGTAGAGAGTAGAGAAACAAGGCTGGACTGGAGAGTACCCCAGTACAATGTAAAACAACTGCTGGCTAGGCTCGTCGAAACTCTAGGACATATATGACCCGTTTGCGTAAGTGGAGGTGACACATCTTGCTGGAGTTGGCTTGTAGACAATAACCCAACTGAGTTTTTAGAAAATTGTGGCAGTGTAGTATTTTGCTGCTCGCTTTAGATTGCAGTTAATCAGTTTCAAAGGAATCATACTGTTAATCGGTTGAGCACAGAAGGAGAGGCCCTGGACCATGGTGGCATATCGGATGGGAGATGATGTAGATGGCATTTTCAGATCAGTGGCTGAATATATCATCGGTGATGGAGCTGATAACAGATACTGGACGACAAATTGGACGGGAAATGGTTGCTTCGCCTGGAGGTGGCCTATCCTGTACTCCTATGTAGGACACTCCAGGTTGTCGGTCGCCCAGGCCATGGTTAATCATAGATGGGTGCGAGATTTGCAGGGTTCCTTGTTCAATGAAGCCTTGGGTGACTTCTTTCAGCTTTGGGACGAGGTTCATGATGTGGCTCTACAGCCTAATGCAGATGCAATCAGATTGAAACTGACTGGAGATAGGGCAATTCTCGGCTGCCTCGGCATATGATCTTTTCTTCATGG-CCAAAGAGGACTG-CCCTTATGGAGAGATGCTGAGGCACTCCAGACTCCAGAGCACCATTGAGAGTCTGTTTTTTCATGTGACTAGCCCTGAAAGGAAGATGCCTAACGGCAGACAATCTGGCGAAGAGAAACTGGCCCCACGATGAAGTCTGTCCACTCTGCCAGCGAGATAATGAGGACTGCCACCACCTGTTCGTGGCCTGTAATTTTACAATCGCGGTTTGGCGGTTGATGAGGAGCTGGATTAATGTTGACTTTCCAAT-CCCTGGTGATGAAGATCAACCGCTCACAGACAGGTAGCTTCGGG-CCAGGATGCATTTTCATGTAATGTAAGATGTAATTGTAAGTATACATCCTGGTACTTGACATGAATTA-GGGAGCTGCAGCGCTGTTTTGCAGCTGCTAGCATGTTCTGTAAATTGATGCAAGAAAAGTGACAGGGTGCCAGTGGCACTCATGTTATCTGAAATGGCTGTTCTATGTTCTCTGAGCTAA]
[+] EMBL AK100476 [TACTCCCCACCGGCCAGTGGCCGCCGCGCCGTCGTCCGCCGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGGAGGGCTCCAGCATGGTCCGGCGAGGAGCCACGACCCGCGGCACATCGACATATCGGCGGCGGGAATGGTGTGCTTTGTCGCCGTCGTGGGGGGGCACGGCCTGGAAGCGGATCTCCATTGCCGCAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAATTGGAGCTCGAACAGCCATGGCGGAACCCGTGGGCGAACGAGCAATGCCCCCCAACCCCGGCGTCACAGCAAGGTCCTGACGATGTTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGGTGGGGCATCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTAATTTTAGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAACAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAATTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTTATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTTTGCAGAAGATGTTCATATCAAACTTGGTGTAAGTCACTCGGCACAAGTGCTGCTGGCAAGATAGTAGAGAGTAGAGAAACAAGGCTGGACTGGAGAGTACCCCAGTACAATGTAAAACAACTGCTGGCTAGGCTCGTCGAAACTCTAGGACATATATGACCCGTTTGCGTAAGTGGAGGTGACACATCTTGCTGGAGTTGGCTTGTAGACAATAACCCAACTGAGTTTTTAGAAAATTGTGGCAGTGTAGTATTTTGCTGCTCGCTTTAGATTGCAGTTAATCAGTTTCAAAGGAATCATACTGTTAATCGGTTGAGCACAGAAGGAGAGGCCCTGGACCATGGTGGCATATCGGATGGGAGATGATGTAGATGGCATTTTCAGATCAGTGGCTGAATATATCATCGGTGATGGAGCTGATAACAGATACTGGACGACAAATTGGACGGGAAATGGTTGCTTCGCCTGGAGGTGGCCTATCCTGTACTCCTATGTAGGACACTCCAGGTTGTCGGTCGCCCAGGCCATGGTTAATCATAGATGGGTGCGAGATTTGCAGGGTTCCTTGTTCAATGAAGCCTTGGGTGACTTCTTTCAGCTTTGGGACGAGGTTCATGATGTGGCTCTACAGCCTAATGCAGATGCAATCAGATTGAAACTGACTGGAGATAGGGCAATTCTCGGCTGCCTCGGCATATGATCTTTTCTTCATGG CCAAAGAGGACTG CCCTTATGGAGAGATGCTGAGGCACTCCAGACTCCAGAGCACCATTGAGAGTCTGTTTTTTCATGTGACTAGCCCTGAAAGGAAGATGCCTAACGGCAGACAATCTGGCGAAGAGAAACTGGCCCCACGATGAAGTCTGTCCACTCTGCCAGCGAGATAATGAGGACTGCCACCACCTGTTCGTGGCCTGTAATTTTACAATCGCGGTTTGGCGGTTGATGAGGAGCTGGATTAATGTTGACTTTCCAAT CCCTGGTGATGAAGATCAACCGCTCACAGACAGGTAGCTTCGGG CCAGGATGCATTTTCATGTAATGTAAGATGTAATTGTAAGTATACATCCTGGTACTTGACATGAATTA GGGAGCTGCAGCGCTGTTTTGCAGCTGCTAGCATGTTCTGTAAATTGATGCAAGAAAAGTGACAGGGTGCCAGTGGCACTC ]
[+] EMBL CF324248 [ TTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAACAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAATTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGA ]
[+] EMBL BQ908549 [ TTCTTCATGGCCCAAAGAGGACTGCCCCTTATGGAGAGATGCTGA GCACTCCAGACTCCAGAGCACCATTGAGAGTCTGTTTTTTCATGTGACTAGCCCTGAAAGGAAGATGCCTAACGGCAGACAATCTGGCGAAGAGAAACTGGCCCCACGATGAAGTCTGTCCACTCTGCCAGCGAGATAATGAGGACTGCCACCACCTGTTCGTGGCCTGTAATTTTACAATCGCGGTTTGGCGGTTGATGAGGAGCTGGATTAATGTTGACTTTCCAATCCCCTGGTGATGAAGATCAACCGCTCACAGACTGGTAGCTTCGGGCCCAGGATGCATTTTCATGTAATGTAAGATATAATTGTAAGTATACATCCTGGTACTTGACATGAATTAGGGGAGCTGCAGCGCTGTTTTGCAGCTGCTAGCATGTTCTGTAAATTGATGCAAGAAAAGTGACAGGGTGCCAGTGGCACTCATGTTATCTGAAATGGCTGTTCTATGTTCTCTGAGCTAA]
consensusID : consensus_11570#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1383 fasta sequence
[CTACTCCCCACCGGCCAGTGGCCGCCGCGCCGTCGTCCGCCGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGGAGGGCTCCAGCATGGTCCGGCGAGGAGCCACGACCCGCGGCACATCGACATATCGGCGGCGGGAATGGTGTGCTTTGTCGCCGTCGTGGGGGGGCACGGCCTGGAAGCGGATCTCCATTGCCGCAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAATTGGAGCTCGAACAGCCATGGCGGAACCCGTGGGCGAACGAGCAATGCCCCCCAACCCCGGCGTCACAGCAAGGTCCTGACGATGTTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAATAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAGTTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTTATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTACTTTGTTACCGCTAAAGAGGGATGCGTATAATGTAGTATTGTATTGCTTGTTTGATACTTTCGTTACTAATGCTATCGAGCCTCACTAA]
[+] EMBL AK111393 [CTACTCCCCACCGGCCAGTGGCCGCCGCGCCGTCGTCCGCCGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGGAGGGCTCCAGCATGGTCCGGCGAGGAGCCACGACCCGCGGCACATCGACATATCGGCGGCGGGAATGGTGTGCTTTGTCGCCGTCGTGGGGGGGCACGGCCTGGAAGCGGATCTCCATTGCCGCAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAATTGGAGCTCGAACAGCCATGGCGGAACCCGTGGGCGAACGAGCAATGCCCCCCAACCCCGGCGTCACAGCAAGGTCCTGACGATGTTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAATAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAAAGATAAAATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAGAGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTAGAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAGTTATAGGTATCCATGGATTAGTCTTCTATCTCCTTGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTTTTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTTTCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCATGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTTATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTACTTTGTTACCGCTAAAGAGGGATGCGTATAATGTAGTATTGTATTGCTTGTTTGATACTTTCGTTACTAATGCTATCGAGCCTCACTAA]
consensusID : consensus_11570#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence
[TTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGGTGGGGCATCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTAATTTTAGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAAC]
[+] EMBL CF305621 [TTGGAAAACCATAAATGTAGTGCCTCAGTTTTATCATTGAATTGGACTAATCACTAATGGGGTGGGGCATCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTAATTTTAGATTTCTAGGTAGTACTTCATTTTGCAAAAGATGAAAAGATTAAACTTGGTCGAAGTCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTGACTGGAAGCAGGTCTCCAGTGGCACAGGCCTCTACAAGGTCTCCGATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTTCCATCTCAGTTTACCATGGGAAGACCTTACCTTCCTAGATTGTGCACTACTCATGTTGACTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTTGAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTACTGAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11570#1 ------------------------------------------------------------
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CCAAGGAGAAGCCATTCCATTCCCCCCCACCGACCAGTGGCCGCCGCACCACGCCGTCTC 60
consensus_11570#1 --------------------TACTCCCCACCGGCCAGTGGCCGCCGC-GCCGTCGTCCGC 39
consensus_11570#2 -------------------CTACTCCCCACCGGCCAGTGGCCGCCGC-GCCGTCGTCCGC 40
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CGATCATCTCCCTGAGCCGGCGAAGCCGCTGAGCTAGGGGAGGGCGCCACCGGGAGGCGG 120
consensus_11570#1 CGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGG---AGGGCTCCAGCATGGTCCG- 95
consensus_11570#2 CGCACCACTCCATCTCCGATCTCCCTGAGTCGCTGGG---AGGGCTCCAGCATGGTCCG- 96
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CATGACCATCCTGGTCTGGATCCTGAGGGAGAATGGGTATAATATTCCACCTCAGTCCTC 180
consensus_11570#1 ------GCGAGGAGCCACGACCCGCGGCACAT---CGACATA-TCGGCGGCG-GGAATGG 144
consensus_11570#2 ------GCGAGGAGCCACGACCCGCGGCACAT---CGACATA-TCGGCGGCG-GGAATGG 145
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 AGTCCCGCCCGGAGCCACGGCCCGCGGCACATGGACGACCTAGCCGGCGGCGAGGGATGG 240
consensus_11570#1 TGT-GCTTTGTCGCCGTCGTGGGGGGGCAC----GGCCTGGAAGCGGATCTCCATTGCCG 199
consensus_11570#2 TGT-GCTTTGTCGCCGTCGTGGGGGGGCAC----GGCCTGGAAGCGGATCTCCATTGCCG 200
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TGCCGTTTTGTCGCCGTCGTTGGGGGCGACCACGAACCTGGAAGCGGG-----AGTGGCG 295
consensus_11570#1 CAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAA-TTG 258
consensus_11570#2 CAGTCGTCTCCAAGGTCTCGGGCGACAAGCGCTTCGATCTATTTGTGACCGAGAAA-TTG 259
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CAGTCGTCTCCGAGGTCTCGAG----------TTCGATCTATTTGTCACCGAGAAAATTG 345
consensus_11570#1 GAGCTCGAACAGCCATGGCGGAACCCG-------TGGGCGAACGAGCAATGCCCCCC--- 308
consensus_11570#2 GAGCTCGAACAGCCATGGCGGAACCCG-------TGGGCGAACGAGCAATGCCCCCC--- 309
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GAGCTCGAGCAGCCATGGTGGAGCTCGCGCCTGGTGGGCTGTCGGCCAACGCCCGCCGCC 405
consensus_11570#1 AACCCCGGCG-TCACAGCAAG----------GTCCTGACGA---TGTTGGAAAACCATAA 354
consensus_11570#2 AACCCCGGCG-TCACAGCAAG----------GTCCTGACGA---TGTTGGAAAACCATAA 355
consensus_11570#3 ----------------------------------------------TTGGAAAACCATAA 14
consensus_11570#0 AACCCCGGCGCTCTCCGCAAGTCTCACCTCAATACTGACGAATCTGCTGGTGCTAATTGG 465
*** *
consensus_11570#1 ATGTAGTGCCTCAGTTTTATCATTGAATTG-----GACTAATCACTAATGGGGTGGGGCA 409
consensus_11570#2 ATGTAGTGCCTCAGTTTTATCATTGAATTG-----GACTAATCACTAATGGG-------- 402
consensus_11570#3 ATGTAGTGCCTCAGTTTTATCATTGAATTG-----GACTAATCACTAATGGGGTGGGGCA 69
consensus_11570#0 GACTAATGTTGGAGAGCCATAGCTGTAATAATAATGCCTCAGCCCTGAGAAAATGCCTGG 525
** ** ** ** ** * * * ** * * ** *
consensus_11570#1 TCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTT--TAATT 467
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 TCTTCTGCATGTGATGTTTAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTT--TAATT 127
consensus_11570#0 AAGAAATCAATTTCTGGGCTGTGCGATTGAATAGTAAAGACAGAGACATAATCCCTGCGT 585
consensus_11570#1 TTAGATTTCTAGGTAGTACTTCATTTTGCAAAA-GATGAAAAGATTAAACTTGGTCGAAG 526
consensus_11570#2 ----ATTTCTAGGTAGTACTTCATTTTGCAAAA-GATGAAAAGATTAAACTTGGTCGAAG 457
consensus_11570#3 TTAGATTTCTAGGTAGTACTTCATTTTGCAAAA-GATGAAAAGATTAAACTTGGTCGAAG 186
consensus_11570#0 GGAAAAAGTGGGGAAGCTCTCCCCCCGGTGACTTGGTCTAAAGAAAAAACTTGGTGGAAG 645
* ** ** ** * * * * * ***** ********* ****
consensus_11570#1 TCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGG------------AGCCAGCACTG 574
consensus_11570#2 TCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTG 517
consensus_11570#3 TCACTTGGCACAAATGATGCTAACAAGGGGCGCGAGGTACATTGGAGGGAGCCAGCACTG 246
consensus_11570#0 TCACTTGGCACAAGTGGTGCTGGCAAGGGACACGAGCCTGACTGGA--GAGTGAGTACCC 703
************* ** **** ****** * **** ** ** **
consensus_11570#1 -ACTGGAAGCAGGTCTCCAGTGG-----CACAGGCCT-----CTACAAGGTCTCCG---- 619
consensus_11570#2 -ACTGGAAGCAGGTCTCCAGTGG-----CACAGGCCT-----CTACAAGGTCTCCG---- 562
consensus_11570#3 -ACTGGAAGCAGGTCTCCAGTGG-----CACAGGCCT-----CTACAAGGTCTCCG---- 291
consensus_11570#0 TGCTTGAATTAGATGTTGGAAGGATGATCATCGGGCTAGGATCTGCAGGAACTCCTGCGC 763
** *** ** * * ** ** ** ** ** ** * ****
consensus_11570#1 ATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTT 679
consensus_11570#2 ATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTT 622
consensus_11570#3 ATGGCTTGTTGAGCAATCCGACCCCAATATCCTGGAGCTTTCTGGCTGTTAGCTTCCCTT 351
consensus_11570#0 ATATATGATCCAGGAACCAGCACTGAGTGTAAGCAGGCCTCCAGTGGCGCAGGTCTCCGT 823
** * * ** ** * * * * * * ** * * * ** * ** *
consensus_11570#1 CCATCTCAGTTTACCA------TGGGAAGACCTTACCTTCCTAGATTGTGCACTA-CTCA 732
consensus_11570#2 CCATCTCAGTTTACCA------TGGGAAGACCTTACCTTCCTAGATTGTGCACTA-CTCA 675
consensus_11570#3 CCATCTCAGTTTACCA------TGGGAAGACCTTACCTTCCTAGATTGTGCACTA-CTCA 404
consensus_11570#0 CTCTCCAAGGTTTCCAGCAGGTTGTCGAGCAATGGCAGCCCTAATCCAGGCACTCTCTGA 883
* ** ** ** *** ** ** * * **** ***** ** *
consensus_11570#1 TGTTGA-------CTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTT 785
consensus_11570#2 TGTTGA-------CTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTT 728
consensus_11570#3 TGTTGA-------CTTCAGTATTATCTCATACATGATCCTCTTCTCTCTGTTGAATACTT 457
consensus_11570#0 TGGTTAGCCTCCCCTTCCATCTCAGCTCAC-CATGGGTCCCATTTCTCTGTTGAATCCTT 942
** * * **** * * * **** **** * * * ************ ***
consensus_11570#1 GAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTA- 844
consensus_11570#2 GAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTA- 787
consensus_11570#3 GAATTTGGTGATGTTCAAATTACTTCAATATTAATTAACTCTGCTGATGCCTGTTAGTA- 516
consensus_11570#0 GAATTTGAAAATAGTTTAATTACTGCAATATTAATTA-CTTTGCTGGTGCCAATTGGTAG 1001
******* ** * ******* ************ ** ***** **** ** ***
consensus_11570#1 -------CTGAACAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAA-AGATAA 896
consensus_11570#2 -------CTGAATAACTTATCATTTTGGAAACCATGGCTGTAATCTTCTCCAA-AGATAA 839
consensus_11570#3 -------CTGAAC----------------------------------------------- 522
consensus_11570#0 TTTGGTACTGTACTACTGATTATTTTGGAA-CCATCACTGTAATTTTTTTTTATATATGA 1060
*** *
consensus_11570#1 AATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAG 956
consensus_11570#2 AATTTACAGTCAAGAATTTCTGCTTATTCAATTAAGAAGAATAGAAAGAAGCACTCATAG 899
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 AAAAGGCAG-----AAGCTCTGCCTAGTCAATTAAGAAGAACAGAAAGAAACATACATAG 1115
consensus_11570#1 AGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTA 1016
consensus_11570#2 AGGTTCTCAGTTACAATTTGGATGAAATGGATGCCACAACTAACAGTAATAAAATTGCTA 959
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 AGGTTCTCAGTTACAATTTGGAAGAAACTAATTAAAAAACTAAGGACAG-AATGTGCATA 1174
consensus_11570#1 GAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAATTATAGGTATCCA 1076
consensus_11570#2 GAACTAGTTATGATTCATTTTCTTAGATACATTTTATCAGGACATAGTTATAGGTATCCA 1019
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CCACCAATCTT------TTTTGTACAGAATGTGCCAGTTGGATCTTTCCATCAAGGCTAA 1228
consensus_11570#1 TGGATTAGTCTTCTATCTCCT-TGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTT 1135
consensus_11570#2 TGGATTAGTCTTCTATCTCCT-TGGATTGCCCCCCTCCCAGTGTATAATGCCATTTCTTT 1078
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 ATCATGAGCAAACAATTTTCCATGAATTGACCCTCTTTGATC--ATAGTCCCAT--CCTA 1284
consensus_11570#1 TTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTT 1195
consensus_11570#2 TTTGGACAGATTGTGCCAGTTGAATCTATCCATCAAGGCCAAATCATGAGCAACCAATTT 1138
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GCAAGATGGATTG-GCCATCCGA---TGATGAT-AATGCCTCAGTGTTTTCAGTGAATT- 1338
consensus_11570#1 TCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCA 1255
consensus_11570#2 TCCATGTATGAATGAAGAATTTACACTTTTTGGCTAAATGGATTGTAGTCTCATCCTCCA 1198
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 -----GAATTAATGGGGGTATGGCTTCTTCTGCTTGA--GACATTCAGTTTGTTCAGATA 1391
consensus_11570#1 TGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTT 1315
consensus_11570#2 TGATCCACAAGTGAGCAAGATGAATTACATGGCCATCCCATGAAGGTTAACCTCATTTTT 1258
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CTAATAACTATTGCTTT---TAGTTTACTTTCTTACCC---------TCAATTTGCTTTT 1439
consensus_11570#1 ATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTTTGCAGAAGATGT--TCATATCAAA 1373
consensus_11570#2 ATCAGTGAATTGAATTTTGAGGATAGTACTTCAGTACTT------TGT--TACCGCTAAA 1310
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 ATGATTG--TTTAGTTGTGA--ATAGTACTTCAGTTTGCAGACAATATGATCAGATCAAA 1495
consensus_11570#1 CTTGG-TGTAAGTCACTCGGCACAAGTGCTGCTGGCAAGATAGTAGAG------AGTAGA 1426
consensus_11570#2 GAGGGATGCGTATAATGTAGTATT-GTATTGCTTGTTTGATACTTTCGTT----ACTAAT 1365
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CTTGA-TGGAAGTCACTCGGCATTACTGCTGCTGGCAAGAGAGTAGAGAGTAGAGAAAAG 1554
consensus_11570#1 GAAACAAGGCTGGACTGGAGAGTACCCCAGTACAATGTAAAACAACTGCTGGCTAGGCTC 1486
consensus_11570#2 GCTATCGAGCCTCACTAA------------------------------------------ 1383
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GGAAACAGGTCAGACTAGAGAGTACCCTAGTTTATTGTAAAGTCACTGCTGGCCAGGATC 1614
consensus_11570#1 GTCGAAACTCTAGGACATATATGACCCGTTTGCGTAAGTGGAGGTGACACATCTTGCTGG 1546
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GTAGGA-CTGCAGCAGATATGTGATCCATTTGCAGAAGTGGAGATGACACGTCTTGCTGT 1673
consensus_11570#1 AGTTGGCTTGTAGACAATAACCCAACTGAGTTTTTAGAAAATTGTGGCAGTGTAGTATTT 1606
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 AGTTGTCCTGT-GACAATAAGCCTAAGGAGTTTTTACAAAATTGTGGCA----------- 1721
consensus_11570#1 TGCTGCTCGCTTTAGATTGCAGTTAATCAGTTTCAAAGGAATCATACTGTTAATCGG--- 1663
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TGGTGCTCTCTTCAGATTGTAGTTAAACAGTTTCCAAGGAATCATACTATTAATCTGATC 1781
consensus_11570#1 TTGAGCACAGAAGGAGAGGCCCTGGACCATGGTGGCATATCGGATGGGAGATGATGTAGA 1723
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TTCAGTTTCTTCAGATAACTTTGCTTTCATGTTTGTTTGGTTGTAGATTAATGTCTTAGT 1841
consensus_11570#1 TGGCATTTTCAGATCAGT---GGCTGAATATATCATCGGTGATGGAGCTGATAACAGATA 1780
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TTGCAAAAACTGAGCAGATTAAACTTGGTGGAAGTCACTTGGCACAAGTGCTGCTAGCAA 1901
consensus_11570#1 CTGGACGACAAATTGGACGGGAAATGGTTGCTTCGCCTGGAGG-----TGGCCTATCCTG 1835
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GGGAAACGAGGAACACTAGAGATTTGAGTACCCGCCCAGTACAATTTATAGCCACTGCTG 1961
consensus_11570#1 TACTCCTATGTAGGACACTCCAGGTTGTCGGTCG--CCCAGGCCATGGTTAATCATAGAT 1893
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GAACTAGATGTTGGAAGGGTAGTCTTTTGGGTAGGATCCAAAAGACCCCTGCACATATAT 2021
consensus_11570#1 GGGTGCGAGATTTGCAGGGTTCCTTGTTCAATGAAGC------CTTGGGTGACTTCTTTC 1947
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GATCCTGGAATATGCACGTATAAGCCTCTAGTGGTGCAGTCCTCTCCAAGGTCTCTGGCG 2081
consensus_11570#1 AGCTTTGGGACGAGGTTCATGATGTGGCTCTACAGC-CTAATGCAGATGCAATCAGATTG 2006
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TGTTGTCGGGCAATGCCTACGATCCCGAAGTTCTCTGCCTGTTAGTCTCCCTTTCCATCT 2141
consensus_11570#1 AAACTGACTGGAGATAGGGCAATTCTCGGCTGCCTCGGCATATGATCTTTTCTTCATGGC 2066
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CGGCTTACCATGGGAGAACCTGGCCTTTAGATTGTGCACTCATAATGTTGAATTCGGTAA 2201
consensus_11570#1 CAAAGAGGACTGCCCTTATGGAGAGATGCTGAGGCACTCCAGACTCCAGAGCACCATTGA 2126
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TATCCTAAACAAAATCAATTTTCTCTCTGTTGAATACGTCAATTCGGTCATGTTTAGATT 2261
consensus_11570#1 GAGTCTGTTTTTTCATGTG-ACTAGCCCTGAAAGGAAGATGCCTAACGGCAGACAATCTG 2185
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 ACTTCAATATTAATTAGTGTACTGATGCCAAATAGTTCTGAACTACTGATCATTTTGGAA 2321
consensus_11570#1 GCGAAGAGAAACTGGCCCCACGATGAAGTCTGTCCACTCTGCCAGCGAGATAATGAGGAC 2245
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GCCACGACTGTTTTTTTCGAAGATAAAAAATGGTAGGTGCTCTACCTTTCCATCAAGGCC 2381
consensus_11570#1 TGCCACCACCTGTTCGTGGCCTGTAATTTTACAATCGCGGTTTGGCGGTTGATGAGGAGC 2305
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 AA--ATCATGAGCAAACAATTTGCCATGTATGAATGAAGAATTGACACTATTTGGCTAAA 2439
consensus_11570#1 TGGATTAATGTTGACTTTCCAATCCCTGGTGATGAAGATCAACCGC-TCACAGACAGGTA 2364
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TGGATTGTAGTCTCATCCTCCATGATCCACAAAGCAGGCAAGTTAAATTTCATAGCCATC 2499
consensus_11570#1 GCTTCGGGCCAGGATG----CATTTTCATGTAATGTAAGATGTAATTGTAAGTATACATC 2420
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CCATGAGGCCATGATGGTAATGCCTTAGTTTTATCAGTGAGATGTTCTTCTGCCTCAGAT 2559
consensus_11570#1 CTGGTACTTGACATGAATTAGGGAGCTGCAGCGCTGTTTTGC--AGCTGCTAGCATGTTC 2478
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GTTCAGTTTGCTCAGATACTAATAGCTCTTTTTTTAGTTTACTTACTCACCCTCAATTTG 2619
consensus_11570#1 TGTAAATTGATGCAAGAAAAGTGACAGGGTGCCAGTGGCACTCATGTTATCTGAAATGGC 2538
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CTTTTATGTTTGTTTAATTATAGATAGTACTTCAGTTTGCAGAAGATGATCAGATCAAAC 2679
consensus_11570#1 TGTTCTATGTTCTCTGAGCTAA-------------------------------------- 2560
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TTGGTGGAAATCACTCAGCACAAGTGCTGCTGACAAGAGAGTAGACAGTAGAAAAACAGG 2739
consensus_11570#1 ------------------------------------------------------------
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 CCAGGCACATATTCCAGAAGTACCCCAGTACAATGTAAAGCAACTGCTGGCTAGGATCAG 2799
consensus_11570#1 ------------------------------------------------------------
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TAGGACTGCAGCACATATATGATACATCTGCAGAAGTGGAGTTCACACATCTTGCTGGAG 2859
consensus_11570#1 ------------------------------------------------------------
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TTGGCCTGTACACAAGACGCCTACTAAGTTTCTAGAAAATTGTGATTAATCTGTTTCGAA 2919
consensus_11570#1 ------------------------------------------------------------
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GGAATCATACTGTTAATGGGTGTGCAGGAATCGTTCTCTTGTTGTATTGGAGCCTGCAAA 2979
consensus_11570#1 ------------------------------------------------------------
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TAGTTGTACATTCTTAGAGATGCCAGCTGTTTTTTTTTTTTGTACAGTCTTAAGTAATTG 3039
consensus_11570#1 ------------------------------------------------------------
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 TAAATGTAATGTAAGATGTAATTGTCAATATGCATCCTGGTGCCTGGTGACATGAATTAG 3099
consensus_11570#1 ------------------------------------------------------------
consensus_11570#2 ------------------------------------------------------------
consensus_11570#3 ------------------------------------------------------------
consensus_11570#0 GGGAGCTGCAGCACTGTAAATTGATGCAAGAGAAGTGCCAGGGTTCCAGTGGCACTCATG 3159
consensus_11570#1 -------------------------
consensus_11570#2 -------------------------
consensus_11570#3 -------------------------
consensus_11570#0 TTATCTGAAGTGGCTGTTCTATGTT 3184
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||