These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11594#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1751 fasta sequence [ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAAGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT-GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGGTTCATGCTGGCCCCACTTCTAGTTCATCAAATGGAACAGCTTCAGTAGAAAGGCCTCTCCAGCGTGAGAAACTATACAAAGGAAAGGATGGTTTTGTTGCCGCTGGTTCCACTACTTCAGAAGTTCGTGGTGCTGTGGCTTGGGTTCCCATACTGTGGTTCCAGCAGGCAGAAGACCGCATGCATCTCTGTGTTTATCAGCACAAGAACATAACCATTCTGCTACTGATTCCAGCTTCATCTCTAATAAATGGAGATGATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATGTTTCAATTCAGTTTGTTGTTGT] [+] EMBL AK066491 [ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAGGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGGTTCATGCTGGCCCCACTTCTAGTTCATCAAATGGAACAGCTTCAGTAGAAAGGCCTCTCCAGCGTGAGAAACTATACAAAGGAAAGGATGGTTTTGTTGCCGCTGGTTCCACTACTTCAGAAGTTCGTGGTGCTGTGGCTTGGGTTCCCATACTGTGGTTCCAGCAGGCAGAAGACCGCATGCATCTCTGTGTTTATCAGCACAAGAACATAACCATTCTGCTACTGATTCCAGCTTCATCTCTAATAAATGGAGATGATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTC ] [+] EMBL CB658967 [ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAAGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGGTTCATGCTGGCCCCACTTCTAGTTCATCAAATGGAACAGCTTCAGTA ] [+] EMBL CB626133 [ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAAGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGG ] [+] EMBL CB630231 [ATCCTCTTCTTCCACCCCACCGACTGCCCCATCCTCCTCCAGCTCTCCGTCATCGGCCTCTGCGAGGGGATCATCACCTTCGCTAGAATATTTTCTCCTGATGATGATTGTGAGGTGATAGAATCAGAGAAACACTCCCATGTTTTTTACCAAGCTGAAGCAGATATATGGATGGTTCTGGTAGTGGAGAAAAACAAGGACATTGAGTCAACTTGGCGGTGTGGTGCATTGCAAGGAATTCTTAAAGAGGTTCACTCGCTTTTCACAATGTTCCACGGACCAATTCGAACTTTACTTGACAGGCAACCCAGTGCAGAACTTGCCCGTGGTCACCTTCGCACATTTTTCACAGATTATTTAAGTGATTTTAATGCTGGTAAAAAGATACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGTNGCC ATCACTTGTATTATTTGAAAATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACT ] [+] EMBL AK061889 [ TACAATTGCCAACCTTCCGTGATTGCCTAAAGGAGCGAGGAACTGTCCAAATGCTAACAATCTCACGAGAAGTGGCACTTGAAGTTCAGTCACTCACCACAGTTCTTGGGTCATGTCTTGGAAATGTCATGT GCCAATCACTTGTATTATTTGAAGATCTCTTGGTGTCCACAACACTTCCACCGGATGATACACTAAACCTATATACTTATGCTATCTTGAGGTTAACTCCTCGTGCTTTATTGTCCAATGCAACTTCCTGGTCCTATCTGCGGAAAGGAACTTCGGTTCATGCTGGCCCCACTTCTAGTTCATCAAATGGAACAGCTTCAGTAGAAAGGCCTCTCCAGCGTGAGAAACTATACAAAGGAAAGGATGGTTTTGTTGCCGCTGGTTCCACTACTTCAGAAGTTCGTGGTGCTGTGGCTTGGGTTCCCATACTGTGGTTCCAGCAGGCAGAAGACCGCATGCATCTCTGTGTTTATCAGCACAAGAACATAACCATTCTGCTACTGATTCCAGCTTCATCTCTAATAAATGGAGATGATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTCGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTGCAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATGTTTCAATTCA ] [-] EMBL CB658968 [ ATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATG ] [-] EMBL CB626134 [ ATGGCATTGCTCATGTGAAGAGACATCTTCTTGAAAATGCATCACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCTGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATG ] [-] EMBL CB630232 [ CACAGAACATTGTGACTCTGGAGCTGAAATTATCACGAGGATGGGGAGGAGAAAATGCTTATCATGTTGGTGGATATCGCTACTTACTTGTTGATCCAGATAGAAAAGTATCAAGAGCCTCCCCACCTGGGAAAGTCACCACCCTCTCAAAGGATTCTCTACTTTCCTTGAATAGACTAAGAGAAGAAATAGATTTGGAGAAGTCAAGGGCCAAGAGGTCTGACTCTTGTCATGACAAGGATTTTGAAGTATGCATCAGAGCCAAAAATAATGCATGGGTCATTGCTAAAGTTACCCGAGGAAGAGAACTTTATATGGCGTTAGAGAAGGCCGGTGAAACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAGACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTATTTCATTCGATTGCTTCGATATCTATGTTTCAATTCAGTTTGTTGTTGT] [+] EMBL AU166942 [ AACACTTCTTTATGCATCTACTGCCATCGAGAAGTTTAGCAACAGGTACTGTGAAGGAGCATTCTCTACAGACTAGAACACCGAAATGACAACGATTGTTTTATCCAAACCACTCACCTATCCAGCTTCGTCATTTAGGCTGTGCGGCTCGCTCCCTCATGGTGTCGTGAATATGGATCTTGTTATTTTGAAGAGATTCGTACATGTTGTACAGCTGCCATGTTGTTGCCTTTCTATGCATACAAAACAAATAGCTTCGTCAGAGAACAATACAGCGCAGGAAACAGTCAGTTTCCCCTGCCCTGCGCTCCGACGTCCTTCCAGTTCCAGATTCGACCATCTTAATTTGTTTGTTGTATATTCTGACGATGGACCTGCTGACTTATGTAGTAGTTCATTCGATTGCTTCGATATCTATGTTTCAATTCAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||