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Oryza sativa
cluster # 11601 cluster # 11601       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11601#0 length = 1610 sequences # 1  
consensus_11601#1 length = 1263 sequences # 8  

consensusID : consensus_11601#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1610
fasta sequence
                              [GCCGACGGCCCCACCTGCCATTCTCCCCGCTACGCCAGCCGCCTAGCAAAGCAGCCACCGCCTCGCAAGCTCCCACACACCACAACCAACTCCTCCCCTCCCAGAACGGCAAAACCCCCAGAAACGCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGCGGCGGCGGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCGACCGGCGACGACAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCCCGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGGTGGGAGCTGAGGAGGTGGAGGATGAGGAGGACTACGTGCTGCGGGAGATTGACGTCTACTTTACGCCCAAGCCCTTCGACGAGGACACCATGGTAATGGCTGCTCGCAGACTCCCTTCCGTAATTGTGCTGTAGGGGTGGCAAATTTGCTAAGTTGTTACTTGTTAGTAGTAGTAAGGAATTGAGCTAATTTAACCAGTTCCAACCTATTGACCCTTTTCCTCTTCACATGTACATGTCCTTGTAGCCAATAATTCAGATTATTTGGCCTGGCCTGCACAAACTGTTCTGCTCATTTTTTTTTGTTTAAAGTGTTCTCTATGCCTTTTTTGTTTGGTTAATGGAAAATAAAAACTTCTCTAGTAAAGTTGTGTTTTGCATATAGAAAATTGACTGATTAAATTAACATATATAAAACGTTAATAGCTCCACTACATAAGGGCTTTTTTCCATGTTTCAATCTGATAAAAAATTGAACAGGAAAATATTTTGTTTTTCCTTCTGGTTGAATTGAGATACACTGCAAGTTTGTTGGAGTCTTTTGGCAGATGCTATTTTTATCATATTTATTGACACTAAACTTTATCATATAATTCACAGCTTTACGTAATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATATGTAAGGAGGTACATGCCCAATTAACTGTCCTCTTTTGATGATTTATACCTAATTTGGAATTTATACTGTACTATTTAATTGTACTCCAATACTTTATTAAAGGGATTATGACTGTCAGGTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACAGAGTGTGAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGGTGATCATTTCCTTTTTGTTTTCACTGAATTAATCACATCAAGGTTTTCCTTTGCTGTGTACAGAGCAAACTCTTATGTATGGCCAGCATATTTCTACAATCCGCATGGTGTTCTTATTAGTTTTGGAATAACTCGATTTCATATTTTTGCTGTTAAATGTTTACGTTCATCTCTGAAGTACATATTTCATAGTATTGCCATTTGAGTGATCTTTTGCAGTATAGTTAATCTTCCTGTCTATTTCAAATTTTTTGGATAAAAATTTATCAATTTCTGATATCATCTTGATCTAATTATTATTAATTT]

[+] EMBL AK110860             [GCCGACGGCCCCACCTGCCATTCTCCCCGCTACGCCAGCCGCCTAGCAAAGCAGCCACCGCCTCGCAAGCTCCCACACACCACAACCAACTCCTCCCCTCCCAGAACGGCAAAACCCCCAGAAACGCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGCGGCGGCGGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCGACCGGCGACGACAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCCCGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGGTGGGAGCTGAGGAGGTGGAGGATGAGGAGGACTACGTGCTGCGGGAGATTGACGTCTACTTTACGCCCAAGCCCTTCGACGAGGACACCATGGTAATGGCTGCTCGCAGACTCCCTTCCGTAATTGTGCTGTAGGGGTGGCAAATTTGCTAAGTTGTTACTTGTTAGTAGTAGTAAGGAATTGAGCTAATTTAACCAGTTCCAACCTATTGACCCTTTTCCTCTTCACATGTACATGTCCTTGTAGCCAATAATTCAGATTATTTGGCCTGGCCTGCACAAACTGTTCTGCTCATTTTTTTTTGTTTAAAGTGTTCTCTATGCCTTTTTTGTTTGGTTAATGGAAAATAAAAACTTCTCTAGTAAAGTTGTGTTTTGCATATAGAAAATTGACTGATTAAATTAACATATATAAAACGTTAATAGCTCCACTACATAAGGGCTTTTTTCCATGTTTCAATCTGATAAAAAATTGAACAGGAAAATATTTTGTTTTTCCTTCTGGTTGAATTGAGATACACTGCAAGTTTGTTGGAGTCTTTTGGCAGATGCTATTTTTATCATATTTATTGACACTAAACTTTATCATATAATTCACAGCTTTACGTAATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATATGTAAGGAGGTACATGCCCAATTAACTGTCCTCTTTTGATGATTTATACCTAATTTGGAATTTATACTGTACTATTTAATTGTACTCCAATACTTTATTAAAGGGATTATGACTGTCAGGTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACAGAGTGTGAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGGTGATCATTTCCTTTTTGTTTTCACTGAATTAATCACATCAAGGTTTTCCTTTGCTGTGTACAGAGCAAACTCTTATGTATGGCCAGCATATTTCTACAATCCGCATGGTGTTCTTATTAGTTTTGGAATAACTCGATTTCATATTTTTGCTGTTAAATGTTTACGTTCATCTCTGAAGTACATATTTCATAGTATTGCCATTTGAGTGATCTTTTGCAGTATAGTTAATCTTCCTGTCTATTTCAAATTTTTTGGATAAAAATTTATCAATTTCTGATATCATCTTGATCTAATTATTATTAATTT]


>consensus_11601#0 GCCGACGGCCCCACCTGCCATTCTCCCCGCTACGCCAGCCGCCTAGCAAAGCAGCCACCG CCTCGCAAGCTCCCACACACCACAACCAACTCCTCCCCTCCCAGAACGGCAAAACCCCCA GAAACGCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGCGGCGGCGGCCATGG CGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCGACCGGCGACG ACAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGG ATGATTCGATTCCCATGTCCAAGCCCGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGG AGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGGTGG GAGCTGAGGAGGTGGAGGATGAGGAGGACTACGTGCTGCGGGAGATTGACGTCTACTTTA CGCCCAAGCCCTTCGACGAGGACACCATGGTAATGGCTGCTCGCAGACTCCCTTCCGTAA TTGTGCTGTAGGGGTGGCAAATTTGCTAAGTTGTTACTTGTTAGTAGTAGTAAGGAATTG AGCTAATTTAACCAGTTCCAACCTATTGACCCTTTTCCTCTTCACATGTACATGTCCTTG TAGCCAATAATTCAGATTATTTGGCCTGGCCTGCACAAACTGTTCTGCTCATTTTTTTTT GTTTAAAGTGTTCTCTATGCCTTTTTTGTTTGGTTAATGGAAAATAAAAACTTCTCTAGT AAAGTTGTGTTTTGCATATAGAAAATTGACTGATTAAATTAACATATATAAAACGTTAAT AGCTCCACTACATAAGGGCTTTTTTCCATGTTTCAATCTGATAAAAAATTGAACAGGAAA ATATTTTGTTTTTCCTTCTGGTTGAATTGAGATACACTGCAAGTTTGTTGGAGTCTTTTG GCAGATGCTATTTTTATCATATTTATTGACACTAAACTTTATCATATAATTCACAGCTTT ACGTAATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATATGTA AGGAGGTACATGCCCAATTAACTGTCCTCTTTTGATGATTTATACCTAATTTGGAATTTA TACTGTACTATTTAATTGTACTCCAATACTTTATTAAAGGGATTATGACTGTCAGGTTCG TGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACAGAGTGTGAAAA TTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGGTGATCATTTCCTTTTT GTTTTCACTGAATTAATCACATCAAGGTTTTCCTTTGCTGTGTACAGAGCAAACTCTTAT GTATGGCCAGCATATTTCTACAATCCGCATGGTGTTCTTATTAGTTTTGGAATAACTCGA TTTCATATTTTTGCTGTTAAATGTTTACGTTCATCTCTGAAGTACATATTTCATAGTATT GCCATTTGAGTGATCTTTTGCAGTATAGTTAATCTTCCTGTCTATTTCAAATTTTTTGGA TAAAAATTTATCAATTTCTGATATCATCTTGATCTAATTATTATTAATTT



consensusID : consensus_11601#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1263
fasta sequence
                              [TCCCCTCCCAGAACGGCAAAACCCCCAGAAAC-GCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGC-GGC-GGC-GGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCCGACCTCGCCACGCTCGACGCACCCGCGTCCTCCGACGCCGCCGCCGCCGCCCGCTTCCGCCCCAGGGCCAAGGGCAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCC-CGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGGTGGGAGCTGAGGAGGTGGAGGATGAGGAGGACTACGTGCTGCGGGAGATTGACGTCTACTTTACGCCCAAGCCCTTCGACGAGGACACCATGCTTTACGTAATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATAT--------GTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACA-GAGTGTGAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGACACTATCATCATCCAAAGCAGCTGATGTGGCTGATTATGCAGTTGGAGTTCTTAGAGGCAACTTGGTTCATTTGAATCATATTGATGCAGTGATGCAACTGCGACCATCAATGTTACATGTAAATTCTGGTCGATCAAATGCTAGGCAGGCACATGGAGGAGCGAGTAGTGATGCTAGCGGCTCAACTATGCCATCAGTTAAGCGAAATGAGCACTCAGAGGATTCGAAAGACTACACTGAAGAATCTGAGCCATGGATTTCTCTCACTTACCAACAGGCAGGGAGTAATGTTGCAAGAAAATACCATGCTGAGATGGTATCAGATGATGGTGGGCCTATAGATTTCACAATGAGCACATCTGATTATGTAATGTCCTTGTGCCCTGGAGGGTCAACAAACAGCAGGGATAAGAACAAAAGCCATGCAATAAGGGAAATGCTTAAACTGCCATTGGAAGAGCGCCTGAAGAAATGGTTTACTGAGGTATCACAAGTGAATCGATTTGATGCTCTGATGCATCTTGCTCCACTCTATTCAGAGGATGATGTTCTNCAAGTGCTTCCAGTGTATGCGGATTTGGTGCGTGGTTTGTGGGTCTGCAAAAGTTCTTTA]

[+] EMBL AU166826             [TCCCCTCCCAGAACGGCAAAACCCCCAGAAAC GCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGCAGGCAGGCAGGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCCGACCTCGCCACGCTCGACGCACCCGCGTCCTCCGACGCCGCCGCCGCCGCCCGCTTCCGCCCCAGGGCCAAGGGCAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCC CGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGGTGGGAGCTGAGGAGGTGGAGGATGAGGAGGACTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB644448             [               GCAAAACCCCCAGAAAC GCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGC GGC GGC GGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCCGACCTCGCCACGCTCGACGCACCCGCGTCCTCCGACGCCGCCGCCGCCGCCCGCTTCCGCCCCAGGGCCAAGGGCAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCC CGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGGTGGGAGCTGAGGAGGTGGAGGATGAGGAGGACTACGTGCTGCGGGAGATTGACGTCTACTTTACGCCCAAGCCCTTCGACGAGGACACCATGCTTTACGTAATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATAT        GTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACA GAGTGTGAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGACACTATCATCATCCAAAGCAGCTGATGTGGCTGATTATGCAGTTGGAGTTCTTAGAGGCAACTTGGTTCATTTGAATCATATTGATGCAGTGATGCAACTGCGACCATCAATGTTACATGTAAATTCTGGTCGATCAAATGCTAGGCAGGCACATGGAGGAGCGAGTAGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB635146             [                       CCCAGACACTGCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGC GGC GGC GGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCCGACCTCGCCACGCTCGACGCACCCGCGTCCTCCGACGCCGCCGCCGCCGCCCGCTTCCGCCCCAGGGCCAAGGGCAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCC CGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCATCGCGGAAGGGGTGGGAGCTGATGAGGTGGAGGATGAGGAGGACTACCTGCTGCGGGAGATTGACGTCTACTTTACGCCCAAGCCCTTCCACGAGGACACCATGCTTTACGTGATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATAT        GTTCGTGTATAGCCATTGAGTTCAAGAGTTGAAGTAGACTTGAATATCACTACA GAGTGTGACAATTATGACCCATAGGCTCCTCTGCCTTCTATACTAACTGAACAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB635170             [                       CCCAGAAACTGCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGC GGC GGC GGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCCGACCTCGCCACGCTCGACGCACCCGCGTCCTCCGACGCCGCCGCCGCCGCCCGCTTCCGCCCCAGGGCCAAGGGCAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCC CGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGGTGGGAGCTGAGGAGGTGGAGGATGAGGAGGACTACGTGCTGCGGGAGATTGACGTCTACTTTACGCCCAAGCCCTTCGACGAGGACACCATGCTTTACGTAATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATAT        GTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACA GAGTGTGAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGACACTATCATCATCCAAAGCAGCTGATGTGGCTGATTATGCAGTTGGAGTTCTTAGAGGCAACTTGGTTCATTTGAATCATATTGATGCAGTGATGCGACTGCGACCATCAATGTTACATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF306526             [                                  CCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGC GGC GGC GGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCCGACCTCGCCACGCTCGACGCACCCGCGTCCTTTTATTCCGCCGCCGCCGCCCGCTTCCGCCCCAGGGCCAAGGGCAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCCTCGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB635244             [                                           CTCGCCACGAAACCCTAGGGAGAGCCGCGGC GGC GGC GGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCCGACCTCGCCACGCTCGACGCACCCGCGTCCTCCGACGCCGCCGCCGCCGCCCGCTTCCGCCCCAGGGCCAAGGGCAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCC CGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGGTGGGAGCTGAGGAGGAGGAGGATGAGGAGGACTACGTGCTGCGGGAGATTGACGTCTACTTTACGCCCAAGCCCTTCGACGAGGACACCATGCTTTACGTGATGCAATATCCACTGAGGCCGTGGTGGCGCCCATATGAGCTAAATGAAATATGTAAGGAGGTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACACCAGTGTGAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB627926             [                                                                                                                                                                                                                                                                                                                                                                                                                                           aaggggtGGGAGATTGACGTCTACTTTACGCCCAAGCCCTTCGACGAGGACACCATGCTTTACGTAATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATATGTAAGGAGGTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACA GAGTGTGAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGACACTATCATCATCCAAAGCAGCTGATGTGGCTGATTATGCAGTTGGAGTTCTTAGAGGCAACTTGGTTCATTTGAATCATATTGATGCAGTGATGCAACTGCGACCATCAATGTTACATGTAAATTCTGGTCGATCAAATGCTAGGCAGGCACATGGAGGAGCGAGTAGTGATGCTAGCGGCTCAACTATGCCATCAGTTAAGCGAAATGAGCACTCAGAGGATTCGAAAGACTACACTGAAGAATCTGAGCCATGGATTTCTCTCACTTACCAACAGGCAGGGAGTAATGTTGCAAGAAAATACCATGCTGAGATGGTATCAGATGATGGTGGGCCTATAGATTTCACAATGAGCACATCTGATTATGTAATGTCCTTGTGCCCTGGAGGGTCAACAAACAGCAGGGATAAGAACAAAAGCCATGCAATAAGGGAAATGCTTAAACTGCCATTGGAAGAGCGCCTGAAGAAATGGTTTACTGAGGTATCACAAGTGAATCGATTTGATGCTCTGATGCATCTTGCTCCACTCTATTCAGAGGATGATGTTCTNCAAGTGCTTCCAGTGTATGCGGATTTGGTGCGTGGTTTGTGGGTCTGCAAA         ]
[+] EMBL CB635168             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACGTCTACTTTACGCCCAAGCCCTTCGACGAGGACACCATGCTTTACGTAATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATATGTAAGGAGGTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACA GAGTGTGAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGACACTATCATCATCCAAAGCAGCTGATGTGGCTGATTATGCAGTTGGAGTTCTTAGAGGCAACTTGGTTCATTTGAATCATATTGATGCAGTGATGCAACTGCGACCATCAATGTTACATGTAAATTCTGGTCGATCAAATGCTAGGCAGGCACATGGAGGAGCGAGTAGTGATGCTAGCGGCTCAACTATGCCATCAGTTAAGCGAAATGAGCACTCAGAGGATTCGAAAGACTACACTGAAGAATCTGAGCCATGGATTTCTCTCACTTACCAACAGGCAGGGAGTAATGTTGCAAGAAAATACCATGCTGAGATGGTATCAGATGATGGTGGGCCTATAGATTTCACAATGAGCACATCTGATTATGTAATGTCCTTGTGCCCTGGAGGGTCAACAAACAGCAGGGATAAGAACAAAAGCCATGCAATAAGGGAAATGCTTAAACTGCCATTGGAAGAGCGCCTGAAGAAATGGTTTACTGAGGTATCACAAGTGAATCGATTTGATGCTCTGATGCATCTTGCTCCACTCTATTCAGAGGATGATGTTCTNCAAGTGCTTCCAGTGTATGCGGATTTGGTGCGTGGTTTGTGGGTCTGCAAAAGTTCTTTA]


>consensus_11601#1 TCCCCTCCCAGAACGGCAAAACCCCCAGAAACGCCAAACCCTCTCGCCACGAAACCCTAG GGAGAGCCGCGGCGGCGGCGGCCATGGCGACCGGCGACGACAAGCCCCCCTCCCTCGACG CCGACATCGACATGGCCGACCTCGCCACGCTCGACGCACCCGCGTCCTCCGACGCCGCCG CCGCCGCCCGCTTCCGCCCCAGGGCCAAGGGCAAGCCGAAGCCGAAGCCGAAGCCCGAGC CCAAGGCGGAGGATTCGAAGCTCAAGGCGGATGATTCGATTCCCATGTCCAAGCCCGAGG AGCCCAAGCCTGAGGCTGCCGCGCCGATGGAGGACTCGATGGAGGTGGATGGGGTGGGTC CGAGCGCCAGCGCCAGCGCGGAAGGGGTGGGAGCTGAGGAGGTGGAGGATGAGGAGGACT ACGTGCTGCGGGAGATTGACGTCTACTTTACGCCCAAGCCCTTCGACGAGGACACCATGC TTTACGTAATGCAATATCCACTGAGGCCGTGTTGGCGCCCATATGAGCTAAATGAAATAT GTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTGGATATCAATACAGAGTGT GAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACTGAACAGACACTATCATCA TCCAAAGCAGCTGATGTGGCTGATTATGCAGTTGGAGTTCTTAGAGGCAACTTGGTTCAT TTGAATCATATTGATGCAGTGATGCAACTGCGACCATCAATGTTACATGTAAATTCTGGT CGATCAAATGCTAGGCAGGCACATGGAGGAGCGAGTAGTGATGCTAGCGGCTCAACTATG CCATCAGTTAAGCGAAATGAGCACTCAGAGGATTCGAAAGACTACACTGAAGAATCTGAG CCATGGATTTCTCTCACTTACCAACAGGCAGGGAGTAATGTTGCAAGAAAATACCATGCT GAGATGGTATCAGATGATGGTGGGCCTATAGATTTCACAATGAGCACATCTGATTATGTA ATGTCCTTGTGCCCTGGAGGGTCAACAAACAGCAGGGATAAGAACAAAAGCCATGCAATA AGGGAAATGCTTAAACTGCCATTGGAAGAGCGCCTGAAGAAATGGTTTACTGAGGTATCA CAAGTGAATCGATTTGATGCTCTGATGCATCTTGCTCCACTCTATTCAGAGGATGATGTT CTNCAAGTGCTTCCAGTGTATGCGGATTTGGTGCGTGGTTTGTGGGTCTGCAAAAGTTCT TTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11601#0      GCCGACGGCCCCACCTGCCATTCTCCCCGCTACGCCAGCCGCCTAGCAAAGCAGCCACCG 60
consensus_11601#1      ------------------------------------------------------------
                                                                                   

consensus_11601#0      CCTCGCAAGCTCCCACACACCACAACCAACTCCTCCCCTCCCAGAACGGCAAAACCCCCA 120
consensus_11601#1      ---------------------------------TCCCCTCCCAGAACGGCAAAACCCCCA 27
                                                        ***************************

consensus_11601#0      GAAACGCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGCGGCGGCGGCCATGG 180
consensus_11601#1      GAAACGCCAAACCCTCTCGCCACGAAACCCTAGGGAGAGCCGCGGCGGCGGCGGCCATGG 87
                       ************************************************************

consensus_11601#0      CGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGC-GACC------ 233
consensus_11601#1      CGACCGGCGACGACAAGCCCCCCTCCCTCGACGCCGACATCGACATGGCCGACCTCGCCA 147
                       ************************************************* ****      

consensus_11601#0      --------------------------------------------------------GGCG 237
consensus_11601#1      CGCTCGACGCACCCGCGTCCTCCGACGCCGCCGCCGCCGCCCGCTTCCGCCCCAGGGCCA 207
                                                                               * * 

consensus_11601#0      ACGACAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGG 297
consensus_11601#1      AGGGCAAGCCGAAGCCGAAGCCGAAGCCCGAGCCCAAGGCGGAGGATTCGAAGCTCAAGG 267
                       * * ********************************************************

consensus_11601#0      CGGATGATTCGATTCCCATGTCCAAGCCCGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGA 357
consensus_11601#1      CGGATGATTCGATTCCCATGTCCAAGCCCGAGGAGCCCAAGCCTGAGGCTGCCGCGCCGA 327
                       ************************************************************

consensus_11601#0      TGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGG 417
consensus_11601#1      TGGAGGACTCGATGGAGGTGGATGGGGTGGGTCCGAGCGCCAGCGCCAGCGCGGAAGGGG 387
                       ************************************************************

consensus_11601#0      TGGGAGCTGAGGAGGTGGAGGATGAGGAGGACTACGTGCTGCGGGAGATTGACGTCTACT 477
consensus_11601#1      TGGGAGCTGAGGAGGTGGAGGATGAGGAGGACTACGTGCTGCGGGAGATTGACGTCTACT 447
                       ************************************************************

consensus_11601#0      TTACGCCCAAGCCCTTCGACGAGGACACCATGGTAATGGCTGCTCGCAGACTCCCTT--- 534
consensus_11601#1      TTACGCCCAAGCCCTTCGACGAGGACACCATGCT--TTACGTAATGCAATATCCACTGAG 505
                       ******************************** *  *  *     ***   ***  *   

consensus_11601#0      -CCGTAATTGTGCTGTAGGGGTGGCAAATTTGCTAAGTTGTTACTTGTTAGTAGTAGTAA 593
consensus_11601#1      GCCGTGTTGGCGCC-CATATGAGCTAAATGAAATATGTTCGTGTAAAGCCATTGAGTTCA 564
                        ****  * * **   *   * *  ****    ** ***  *         * *   * *

consensus_11601#0      GGAATTGAGCTAATTTAACCAGTTCCAACCTATTGACCCTTTTCCTCTTCACATGTACAT 653
consensus_11601#1      AAAGTTGAAGTAGACTTGGATATCAATACAGAGTGTGAAAATTATGACCCAGAGGTTCCT 624
                         * ****  **   *      *    **  * **      **      ** * ** * *

consensus_11601#0      GT-CCTTGTAG-CCAATAATTCAGATTATTTGGCCTGGCCTGCACAAACTGTTCTGCTCA 711
consensus_11601#1      CTGCCTTCTAGACTAACTGAACAGACACTATCATC-ATCCAAAGCAGCTGATGTGGCTGA 683
                        * **** *** * **     ****   * *   *   **    **     *   *** *

consensus_11601#0      TTTT----TTTTTGTTTAAAGTGTTCTCTATGCCTTTTTTGTTTG-GTTAATGGAAAATA 766
consensus_11601#1      TTATGCAGTTGGAGTTCTTAGAGGCAACTTGGTTCATTTGAATCATATTGATGCAGTGAT 743
                       ** *    **   ***   ** *    **  *    ***   *    ** *** *     

consensus_11601#0      AAAACTTCT-CTAGTAAAGTTGTGTTTTGCATATAGAAAATTGACTGATTAAATTAACAT 825
consensus_11601#1      GCAACTGCGACCATCAATGTTACATGTAAATTCTGGTCGATCAAATG-CTAGGCAGGCAC 802
                         **** *  * *  ** ***   * *    * * *   **  * **  **      ** 

consensus_11601#0      ATATAAAACGTTAATAGCTCCACTACATAAGGGCTTTTTTCCATGTTTCAATCTGATAAA 885
consensus_11601#1      ATGGAGGA-GCGAGTAGTGATGCTA----GCGGCTCA--ACTATGCCATCAGTTAAGCGA 855
                       **  *  * *  * ***     ***      ****     * ***     *  * *   *

consensus_11601#0      AAATTGAACAGGAAAATATTTTGTTTTTCCTTCTGGTTGAAT-TGAGATACACTGCAAGT 944
consensus_11601#1      AA--TGAGCACTCAGAGGATTCGAAAGACTACACTGAAGAATCTGAGCCATGGATTTCTC 913
                       **  *** **   * *   ** *     *      *  **** ****  *          

consensus_11601#0      TTGTTGGAGTCTTTTGGCAGATGCTATTTTTATCATATTTATTGACACTAAACTT-TATC 1003
consensus_11601#1      TCACTTA--CCAACAGGCAGGGAGTAATGTTGCAAGAAAATACCATGCTGAGATGGTATC 971
                       *   *     *    *****    ** * **   * *       *  ** *  *  ****

consensus_11601#0      ATATAATTCACAGCTT-TACGTAATGCAATATCCAC-TGAGGCCGTGTTGGCGCCCATAT 1061
consensus_11601#1      AGATGATGGTGGGCCTATAGATTTCACAATGAGCACATCTGATTATGT-AATGTCCTTGT 1030
                       * ** **     ** * **  *    ****   *** *  *    ***    * ** * *

consensus_11601#0      GAGCTAAATGAAATATGTA-AGGAGGTACATGCCCAATTAACTGTCCTCTTTTGATGAT- 1119
consensus_11601#1      GCCCTGGAGGGTCAACAAACAGCAGGGATAAGAACAAA-AGCCATGCAATAAGGGAAATG 1089
                       *  **  * *    *   * ** *** * * *  ***  * *  * *  *   *   ** 

consensus_11601#0      -TTATACCTAATTTGGAATTTATACTGTACTATTTAATTGTACTCCAATACTTTAT-TAA 1177
consensus_11601#1      CTTAAACTGCCATTGGAAGAGCGCCTGAAGAAATGGTTT--ACTGAGGTATCACAAGTGA 1147
                        *** **     ******      *** *  * *   **  ***    **    *  * *

consensus_11601#0      AGGGATTATGACTGTCAGGTTCGTGTAAAGCCATTGAGTTCAAAAGTTGAAGTAGACTTG 1237
consensus_11601#1      ATCGATT-TGATGCTCTGATGCATCTTGCTCCACTCTATTCAGAGGATGATGT---TCTN 1203
                       *  **** ***   ** * * * * *    *** *   **** * * *** **     * 

consensus_11601#0      GATATCAATACAGAGTGTGAAAATTATGACCCAGAGGTTCCTCTGCCTTCTAGACTAACT 1297
consensus_11601#1      CAAGTGCTTCCAGTGTATGCGGATT-TGGTGC-GTGGTTTGTGGGTCTGCAAAAGTTCTT 1261
                        *  *   * *** ** **   *** **   * * ****  *  * ** * * * *   *

consensus_11601#0      GAACAGGTGATCATTTCCTTTTTGTTTTCACTGAATTAATCACATCAAGGTTTTCCTTTG 1357
consensus_11601#1      TA---------------------------------------------------------- 1263
                        *                                                          

consensus_11601#0      CTGTGTACAGAGCAAACTCTTATGTATGGCCAGCATATTTCTACAATCCGCATGGTGTTC 1417
consensus_11601#1      ------------------------------------------------------------
                                                                                   

consensus_11601#0      TTATTAGTTTTGGAATAACTCGATTTCATATTTTTGCTGTTAAATGTTTACGTTCATCTC 1477
consensus_11601#1      ------------------------------------------------------------
                                                                                   

consensus_11601#0      TGAAGTACATATTTCATAGTATTGCCATTTGAGTGATCTTTTGCAGTATAGTTAATCTTC 1537
consensus_11601#1      ------------------------------------------------------------
                                                                                   

consensus_11601#0      CTGTCTATTTCAAATTTTTTGGATAAAAATTTATCAATTTCTGATATCATCTTGATCTAA 1597
consensus_11601#1      ------------------------------------------------------------
                                                                                   

consensus_11601#0      TTATTATTAATTT 1610
consensus_11601#1      -------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)