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Oryza sativa
cluster # 11626 cluster # 11626       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11626#0 length = 1450 sequences # 4  
consensus_11626#1 length = 761 sequences # 2  
consensus_11626#2 length = 736 sequences # 3  

consensusID : consensus_11626#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1450
fasta sequence
                              [CCACAAATTAATTTGGTAGGCTAGCTAGCTTGGATATATAGAATGATGAAGAACATGATGAGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACTTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACATGTTCGTCTTCGCCACCGCCCAGCAGCAGCAGAACCGCTCCGCCACGCCGGCCGAAGTCGCCGCCTTCTACACCACCCTCATCACCAAATTCTCCGCCGCCCTCACGGAGCTGTACGAGATGGGGGCGAGGAAGTTTGGCATCATCAACGTGGGGCTGGTCGGTTGCGTGCCGCTGGTGCGAGCGCAGAGCCCCACCGGCGCCTGCAGCGACGACCTCAACGGCCTCGCCGCCGGCTTCAACGACGCCCTCGCCTCCCTCCTCTCCGACCTCGCCGCGCGCCTTCCCGGCTTCGCCTACTCCATCGCCGACGCCCACGCCGCCGGCCAGCTCGCGTTCGCCGACCCCGCGGCGTCCGGGTACACCAGCGTTGACGCCGCGTGCTGCGGGAGCGGGAGGCTGGGCGCGGAGGAGGACTGCCAGGTGGGCTCCACGCTCTGCGCCGACCGCGACAAGTGGGCCTTCTGGGACCGCGTCCACCCCTCGCAGAGGGCCACCATGCTCAGCGCCGCGGCCTACCACGACGGCCCGGCCCAATTAACCAAGCCCATCAACTTCAAACAGCTCGCCCGCACCACTGCTTAATTACGGACTACTACGTACTCTTATTTTATTTGTTAGTGTATATTCAGCTAGCAAATTCAATTCACTCAATATGAGAGCATCGTAATGTAATATATATTTGTTCATGTATGCATATGCGTTGATTTTTCTTTTGGGGCGAAGCAGTGTGTACCAGGAATGAACGTACACACAAATTTTGATTTTTTTTCTAAAGAAATTGTGATGTAA-TTTTTTTTAGAATTTGTGATGTATTTGGAGATGATCGATTTGAGGATTCGGAGAT---CTAAAAAGGAATGATCTGTGATAAAAAAAACCTAAAA]

[+] EMBL AK065261             [CCACAAATTAATTTGGTAGGCTAGCTAGCTTGGATATATAGAATGATGAAGAACATGATGAGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACTTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACATGTTCGTCTTCGCCACCGCCCAGCAGCAGCAGAACCGCTCCGCCACGCCGGCCGAAGTCGCCGCCTTCTACACCACCCTCATCACCAAATTCTCCGCCGCCCTCACGGAGCTGTACGAGATGGGGGCGAGGAAGTTTGGCATCATCAACGTGGGGCTGGTCGGTTGCGTGCCGCTGGTGCGAGCGCAGAGCCCCACCGGCGCCTGCAGCGACGACCTCAACGGCCTCGCCGCCGGCTTCAACGACGCCCTCGCCTCCCTCCTCTCCGACCTCGCCGCGCGCCTTCCCGGCTTCGCCTACTCCATCGCCGACGCCCACGCCGCCGGCCAGCTCGCGTTCGCCGACCCCGCGGCGTCCGGGTACACCAGCGTTGACGCCGCGTGCTGCGGGAGCGGGAGGCTGGGCGCGGAGGAGGACTGCCAGGTGGGCTCCACGCTCTGCGCCGACCGCGACAAGTGGGCCTTCTGGGACCGCGTCCACCCCTCGCAGAGGGCCACCATGCTCAGCGCCGCGGCCTACCACGACGGCCCGGCCCAATTAACCAAGCCCATCAACTTCAAACAGCTCGCCCGCACCACTGCTTAATTACGGACTACTACGTACTCTTATTTTATTTGTTAGTGTATATTCAGCTAGCAAATTCAATTCACTCAATATGAGAGCATCGTAATGTAATATATATTTGTTCATGTATGCATATGCGTTGATTTTTCTTTTGGGGCGAAGCAGTGTGTACCAGGAATGAACGTACACACAAATTTTGATTTTTTTTCTAAAGAAATTGTGATGTAA TTTTTTTTAGAATTTGTGATGTATTTGGAGATGATCGATTTGAGGATTCGGAG                                          ]
[-] EMBL CB652575             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGAGATGGGGGCGAGGAAGTTTGGCATCATCAACGTGGGGCTGGTCGGTTGCGTGCCGCTGGTGCGAGCGCAGAGCCCCACCGGCGCCTGCAGCGACGACCTCAACGGCCTCGCCGCCGGCTTCAAAGACGCCCTCGCCTCCCTCCTCTCCGACCTCGCCGCGCGCCTTCCCGGCTTCGCCTACTCCATCGCCGACGCCCACGCCGCCGGCCAGCTCGCGTTCGCCGACCCCGCGGCGTCCGGGTACACCAGCGTTGACGCCGCGTGCTGCGGGAGCGGGAGGCTGGGCGCGGAGGAGGACTGCCAGGTGGGCTCCACGCTCTGCGCCGACCGCGACAAGTGGGCCTTCTGGGACCGCGTCCACCCCTCGCAGAGGGCCACCATGCTCAGCGCCGCGGCCTACCACGACGGCCCGGCCCAATTAACCAAGCCCATCAACTTCAAACAGCTCGCCCGCACCACTGCTTAATTACGGACTACTACGTACTCTTATTTTATTTGTTAGTGTATATTCAGCTAGCAAATTCAATTCACTCAATATGAGAGCATCGTAATGTAATATATATTTGTTCATGTATGCATATGCGTTGATTTTTCTTTTGGGGCGAAGCAGTGTGTACCAGGAATGAACGTACACACAAATTTTGATTTTTTTTCTAAAGAAATTGTGATGTAATTTTTTTTTAGAATTTGTGAAGGATTTGGAGATGATCGATTTGAGGATTCGGAGAT   CTAAAA                               ]
[-] EMBL CB652580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGGCGAGGAAGTTTGGCATCATCAACGTGGGGCTGGTCGGTTGCGTTCCGCTGGTGCGAGCGCAGAGCCCCACCGGCGCCTGCAGCGACGACCTCAACGGCCTCGCCGCCGGCTTCAACGACGCCCTCGCCTCCCTCCTCTCAGACCTCGCCGCGCGCCTTCCCGGCTTCGCCTACTCCATAGCCGACGCCCACGCCGCCGGCCAGCTCGCGTTCGCCGACCCCGCGGCGTCCGGGTACACCAGCGTTGACGCCGCGTGCTGCGGGAGCGGGAGGCTGGGCGCGGAGGAGGACTGCCAGGTGGGCTCCACGCTATGCGCCGACCGCGACAAGTGGGCCTTCTGGGACCGCGTCCACCCCTCGCAGAGGGCCACCATGCTCAGCGCCGCGGCCTACCACGACGGCCCGGCCCAATTAACCAAGCCCATCAACTTCAAACAGCTCGCCCGCACCACTGCTTAATTACGGACTACTACGTACTCTTATTTTATTTGTTAGTGTATATTCAGCTAGCAAATTCAATTCACTCAATATGAGAGCATCGTAATGTAATATATATTTGTTCATGTATGCATATGCGTTGATTTTTCTTTTGGGGCGAAGCAGTGTGTACCAGGAATGAACGTACACACAAATTTTGATTTTTTTTCTAAAGAAATTGTGATGTAATTTTTTTTTAGAATTTGTGAAGTATTTGGAGATGATCGATTTGAGGATTCGGAGAT   CTTAAAAGGAA                          ]
[-] EMBL CB668995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGCGAGGAAGTTTGGCATCATCAACGTGGGGCTGGTCGGTTGCGTGCCGCTGGTGCGAGCGCAGAGCCCCACCGGCGCCTGCAGGGACGACCTCAACGGCCTCGCCGCCGGCTTCAANGACGCCCTCGCCTCCCTCCTTTCCGACCTCGCCGCGCGCCTTCCCGGCTTCGCCTACTCCATCGCCGACGCCCACGCCGCCGGCCAGCTCGCGTTCGCCGACCCCGCGGCGTCCGGGTACACCAGCGTTGACGCCGCGTGCTGCGGGAGCGGGAGGCTGGGCGCGGAGGAGGACTGCCAGGTGGGCTCCACGCTTTGCGCCGACCGCGACAAGTGGGCCTTTTGGGACCGCGTCCACCCCTCGCAGAGGGCCACCATGCTCAGCGCCGCGGCCTACCACGACGGCCCGGCCCAATTAACCAAGCCCATCAACTTCAAACAGCTCGCCCGCACCACTGCTTAATTACGGACTACTACGTACTCTTATTTTATTTGTTAGTGTATATTCAGCTAGCAAATTCAATTCACTCAATATGAGAGCATCGTAATGTAATATATATTTGTTCATGTATGCATATGCGTTGATTTTTCTTTTGGGGCGAAGCAGTGTGTACCAGGAATGAACGTACACACAAATTTTGATTTTTTTTCTAAAGAAATTGTGATGTAA TTTTTTTTAGAATTTGTGATGTATTTGGAGATGATCGATTTGAGGATTCGGGGATATCCTATTATG   TGATCTGTGATAAAAAAAACCTAAAA]


>consensus_11626#0 CCACAAATTAATTTGGTAGGCTAGCTAGCTTGGATATATAGAATGATGAAGAACATGATG AGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTA TTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCAAGGATGTGT TCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCT TCAGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCC CTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCA TCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCA CTTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGG CGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCT TCCTCCTCGGCGTCGTCAACAACGACATGTTCGTCTTCGCCACCGCCCAGCAGCAGCAGA ACCGCTCCGCCACGCCGGCCGAAGTCGCCGCCTTCTACACCACCCTCATCACCAAATTCT CCGCCGCCCTCACGGAGCTGTACGAGATGGGGGCGAGGAAGTTTGGCATCATCAACGTGG GGCTGGTCGGTTGCGTGCCGCTGGTGCGAGCGCAGAGCCCCACCGGCGCCTGCAGCGACG ACCTCAACGGCCTCGCCGCCGGCTTCAACGACGCCCTCGCCTCCCTCCTCTCCGACCTCG CCGCGCGCCTTCCCGGCTTCGCCTACTCCATCGCCGACGCCCACGCCGCCGGCCAGCTCG CGTTCGCCGACCCCGCGGCGTCCGGGTACACCAGCGTTGACGCCGCGTGCTGCGGGAGCG GGAGGCTGGGCGCGGAGGAGGACTGCCAGGTGGGCTCCACGCTCTGCGCCGACCGCGACA AGTGGGCCTTCTGGGACCGCGTCCACCCCTCGCAGAGGGCCACCATGCTCAGCGCCGCGG CCTACCACGACGGCCCGGCCCAATTAACCAAGCCCATCAACTTCAAACAGCTCGCCCGCA CCACTGCTTAATTACGGACTACTACGTACTCTTATTTTATTTGTTAGTGTATATTCAGCT AGCAAATTCAATTCACTCAATATGAGAGCATCGTAATGTAATATATATTTGTTCATGTAT GCATATGCGTTGATTTTTCTTTTGGGGCGAAGCAGTGTGTACCAGGAATGAACGTACACA CAAATTTTGATTTTTTTTCTAAAGAAATTGTGATGTAATTTTTTTTAGAATTTGTGATGT ATTTGGAGATGATCGATTTGAGGATTCGGAGATCTAAAAAGGAATGATCTGTGATAAAAA AAACCTAAAA



consensusID : consensus_11626#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 761
fasta sequence
                              [GTAGGCTAGCTAGCTTGGATATATAGAATGATGAAGAACATGATGAGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCGGTGTTCGTGCTGGGTGACTCGACGCTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGCCGAC-TTCATAGCAATGAAGCT-GGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACTGTAATATATATACTCCTCTCTCTACGTACATATATCCATCTCGAGAGAGAGAGATCAGAATACATATATATCCCGTAGCACATTAATTGTGAGCTGAGATCGAGTTGCTGAATATATATACTTTGAATGCATATGCATATATGATATGCAGTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACA]

[+] EMBL CB672462             [GTAGGCTAGCTAGCTTGGATATATAGAATGATGAAGAACATGATGAGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCGGTGTTCGTGCTGGGTGACTCGACGCTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGCCGAC TTCATAGCAATGAAGCT GGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACTGTAATATATATACTCCTCTCTCTACGTACATATATCCATCTCGAGAGAGAGAGATCAGAATACATATATATCCCGTAGCACATTAATTGTGAGCTGAGATCGAGTTGCTGAATATATATACTTTGAATGCATATGCATATATGATATGCAGTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACA]
[+] EMBL OSS14540A            [                GGATATATAGAATGATGAAGAACATGATGAGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCGGTGTTCGTGCTGGGTGACTCGACGCTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGNCGACTTTCATAGCAATGAAGCTGGGGGTTCAAGGAGAGNCCTTCGGCTTANCTGTCGgttg                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_11626#1 GTAGGCTAGCTAGCTTGGATATATAGAATGATGAAGAACATGATGAGCAGCGCTACTGTT CGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAG CTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCGGTGTTCGTGCTGGGTGACTCGACG CTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTCAGGGCCAACAAGCCG TACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAAC GTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCG CTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGA GGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACTGTAATATATATACTC CTCTCTCTACGTACATATATCCATCTCGAGAGAGAGAGATCAGAATACATATATATCCCG TAGCACATTAATTGTGAGCTGAGATCGAGTTGCTGAATATATATACTTTGAATGCATATG CATATATGATATGCAGTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCAT GGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCT CGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACA



consensusID : consensus_11626#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 736
fasta sequence
                              [GATATCTCTAATGATGAAGAACATGATGAGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCGGTGTTCGTGCTGGGTGACTCGACGCTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACTTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACATGTTCGTCTTCGCCACCGCCCAGCAGCAGCAGAACCGCTCCGCCACGCCGGCCGAAGTCGCCGCCTTCTACACCACCCTCATCACTAAATTCTCCGCCGCCCTCACGGAGCTGTACGAGATGGGGGCGAAGAAGTTTGGCATC]

[+] EMBL CB645047             [GATATCTCTAATGATGAAGAACATGATGAGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCGGTGTTCGTGCTGGGTGACTCGACGCTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACTTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACATGTTCGTCTTCGCCACCGCCCAGCAGCAGCAGAACCGCTCCGCCACGCCGGCCGAAGTCGCCGCCTTCTACACCACCCTCATCACTAAATTCTCCGCCGCCCTCACGGAGCTGTACGAGATGGGGGCGAAGAAGTTTGGCATC]
[+] EMBL CB668994             [     atagAATGATGAAGAACATGATGAGCAGCGCTACTGTTCGTCCGTGGCTGCTGATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAACGGCAGGTGGCGGCGGTGTTCGTGCTGGGTGACTCGACGCTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCTACTCCACTTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCAGCGTCGTCAACAACGACATGTTCGTCTTCGCCACCGCCCAGCAGCAGCAGAACCGCTCCGCCACGCCGGCCGAAGTCGCCGCCTTCTACACCACCCTCATCACCAAATTCTCCGCCGCCCTCACGGAGCTGTACGAGATGGGGGCGAGGAA          ]
[+] EMBL CB652574             [                                                          ATGATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCGGTGTTCGTGCTGGGTGACTCGACGCTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACTTACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACATGTTCGTCTTCGCCACCGCCCAGCAGCAGCAGAACCGCTCCGCCACGCCGGCCGAAGTCGCCGCCTTCTACACCACCCTCATC                                                            ]


>consensus_11626#2 GATATCTCTAATGATGAAGAACATGATGAGCAGCGCTACTGTTCGTCCGTGGCTGATGAT GATGATGATATCCATAGTAACATTATTATTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCT GCAGCGGCAGGTGGCGGCGGTGTTCGTGCTGGGTGACTCGACGCTGGACGTCGGCAACAA CAACTACCTCCCCGGCAAGGATGTGTTCAGGGCCAACAAGCCGTACAACGGCATCGACTA CCCTGCCTCCAAGCCTACCGGTCGCTTCAGCAATGGCTACAACGTCGCCGACTTCATAGC AATGAAGCTGGGGTTCAAGAAGAGCCCTCCGGCTTACCTGTCGCTGCTGCAGGGGCCTGC AGCTGCAGCCAATCTCACTCTCGCCATCAAAGCTCTCACCGGAGGCGTCAGCTTTGCTTC CGGAGGAGCCGGCGTTCTCGACTCCACTTACGCAGGGAAATGCATCCCGCTGTCGACGCA GCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGCCGT CGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACATGTTCGT CTTCGCCACCGCCCAGCAGCAGCAGAACCGCTCCGCCACGCCGGCCGAAGTCGCCGCCTT CTACACCACCCTCATCACTAAATTCTCCGCCGCCCTCACGGAGCTGTACGAGATGGGGGC GAAGAAGTTTGGCATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11626#0      CCACAAATTAATTTGGTAGGCTAGCTAGCTTGGATATATAGAATGATGAAGAACATGATG 60
consensus_11626#2      --------------------------------GATATCTCTAATGATGAAGAACATGATG 28
consensus_11626#1      ---------------GTAGGCTAGCTAGCTTGGATATATAGAATGATGAAGAACATGATG 45
                                                       ***** *  *******************

consensus_11626#0      AGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTA 120
consensus_11626#2      AGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTA 88
consensus_11626#1      AGCAGCGCTACTGTTCGTCCGTGGCTGATGATGATGATGATATCCATAGTAACATTATTA 105
                       ************************************************************

consensus_11626#0      TTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGC---------- 170
consensus_11626#2      TTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCGGTGTTCGTG 148
consensus_11626#1      TTCCAAGTGCAGCAGCTGGCCGGCGCTCAGCTGCAGCGGCAGGTGGCGGCGGTGTTCGTG 165
                       **************************************************          

consensus_11626#0      ------------------------------------------------AAGGATGTGTTC 182
consensus_11626#2      CTGGGTGACTCGACGCTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTC 208
consensus_11626#1      CTGGGTGACTCGACGCTGGACGTCGGCAACAACAACTACCTCCCCGGCAAGGATGTGTTC 225
                                                                       ************

consensus_11626#0      AGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTC 242
consensus_11626#2      AGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTC 268
consensus_11626#1      AGGGCCAACAAGCCGTACAACGGCATCGACTACCCTGCCTCCAAGCCTACCGGTCGCTTC 285
                       ************************************************************

consensus_11626#0      AGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCT 302
consensus_11626#2      AGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCT 328
consensus_11626#1      AGCAATGGCTACAACGTCGCCGACTTCATAGCAATGAAGCTGGGGTTCAAGAAGAGCCCT 345
                       ************************************************************

consensus_11626#0      CCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATC 362
consensus_11626#2      CCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATC 388
consensus_11626#1      CCGGCTTACCTGTCGCTGCTGCAGGGGCCTGCAGCTGCAGCCAATCTCACTCTCGCCATC 405
                       ************************************************************

consensus_11626#0      AAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACT 422
consensus_11626#2      AAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACT 448
consensus_11626#1      AAAGCTCTCACCGGAGGCGTCAGCTTTGCTTCCGGAGGAGCCGGCGTTCTCGACTCCACT 465
                       ************************************************************

consensus_11626#0      TACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCG 482
consensus_11626#2      TACGCAGGGAAATGCATCCCGCTGTCGACGCAGCTGCGGAGCATGGAGGCGACGAGGGCG 508
consensus_11626#1      GTAATATATATACTCCTCTCTCTACGTACATATATCCATCTCGAGAGAGAGAGATCAGAA 525
                            *   * *  * ** * **    **  *  * *    *  *   * **     *  

consensus_11626#0      GCCATG-GTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTT 541
consensus_11626#2      GCCATG-GTGTCCAAGGTCGGCACCCGCGCCGTCGCCGCCCACCTCGCCCGCTCCTTCTT 567
consensus_11626#1      TACATATATATCCCGTAGCACATTAATTGTGAGCTGAGATCGAGTTGCTGAATATATATA 585
                         ***   * ***     *         *    *   *  *   * **    *   * * 

consensus_11626#0      CCTCCTCGGCGTCGTCAACAACGACATGTT-CGTCTTCGCCACCGCCCAGCAGCAGCAGA 600
consensus_11626#2      CCTCCTCGGCGTCGTCAACAACGACATGTT-CGTCTTCGCCACCGCCCAGCAGCAGCAGA 626
consensus_11626#1      CTTTGAATGCATATGCATATATGATATGCAGTACGCAGGGAAATGCATCCCGCTGTCGAC 645
                       * *     ** *   **   * ** ***          *  *  **    *     *   

consensus_11626#0      ACCGCTCCGC--CACGCCGGCCGAAGTCGCCGCCTTCTACACCACCCTCATCACCAAATT 658
consensus_11626#2      ACCGCTCCGC--CACGCCGGCCGAAGTCGCCGCCTTCTACACCACCCTCATCACTAAATT 684
consensus_11626#1      GCAGCTGCGGAGCATGGAGGCGACGAGGGCGGCCATGGTGTCCAAGGTCGGCACCCGCGC 705
                        * *** **   ** *  ***       ** *** *     ***   **  ***      

consensus_11626#0      CTCCGCCGCCCTCACGGAGCTGTACGAGATGGGGGCGAGGAAGTTTGGCATCATCAACGT 718
consensus_11626#2      CTCCGCCGCCCTCACGGAGCTGTACGAGATGGGGGCGAAGAAGTTTGGCATC-------- 736
consensus_11626#1      CGTCGCCGCCCACCTCGCCCGCTCCTTCTTCCTCCTCGGCGTCGTCAACAACGACA---- 761
                       *  ******** *   *  *  * *    *              *   ** *        

consensus_11626#0      GGGGCTGGTCGGTTGCGTGCCGCTGGTGCGAGCGCAGAGCCCCACCGGCGCCTGCAGCGA 778
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      CGACCTCAACGGCCTCGCCGCCGGCTTCAACGACGCCCTCGCCTCCCTCCTCTCCGACCT 838
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      CGCCGCGCGCCTTCCCGGCTTCGCCTACTCCATCGCCGACGCCCACGCCGCCGGCCAGCT 898
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      CGCGTTCGCCGACCCCGCGGCGTCCGGGTACACCAGCGTTGACGCCGCGTGCTGCGGGAG 958
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      CGGGAGGCTGGGCGCGGAGGAGGACTGCCAGGTGGGCTCCACGCTCTGCGCCGACCGCGA 1018
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      CAAGTGGGCCTTCTGGGACCGCGTCCACCCCTCGCAGAGGGCCACCATGCTCAGCGCCGC 1078
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      GGCCTACCACGACGGCCCGGCCCAATTAACCAAGCCCATCAACTTCAAACAGCTCGCCCG 1138
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      CACCACTGCTTAATTACGGACTACTACGTACTCTTATTTTATTTGTTAGTGTATATTCAG 1198
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      CTAGCAAATTCAATTCACTCAATATGAGAGCATCGTAATGTAATATATATTTGTTCATGT 1258
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      ATGCATATGCGTTGATTTTTCTTTTGGGGCGAAGCAGTGTGTACCAGGAATGAACGTACA 1318
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      CACAAATTTTGATTTTTTTTCTAAAGAAATTGTGATGTAATTTTTTTTAGAATTTGTGAT 1378
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      GTATTTGGAGATGATCGATTTGAGGATTCGGAGATCTAAAAAGGAATGATCTGTGATAAA 1438
consensus_11626#2      ------------------------------------------------------------
consensus_11626#1      ------------------------------------------------------------
                                                                                   

consensus_11626#0      AAAAACCTAAAA 1450
consensus_11626#2      ------------
consensus_11626#1      ------------
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)