These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11636#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2590 fasta sequence [TAATCCGCCTCGGGAACCGCGCGAAGGAGCAGCCGCCCTTTGGAGCTCCGAGAGGTCGCGGCCGCGTGGTGGTGGTGATGCCGCGGCGAGCTCGATTTGGTTGAGATTTTGGGCGCCGATTTCGTGGCCGTGGCGGCGTCGTCGTCGGCGTCGGAGATGGAGGCGAGCGGCGAGGAGCTCCTGAAGAAGATCCGGGAGCTGGAGGTGGGGCAAGCGCAGCTCATGCAGGAGATGTCCAAGCTCGGCGGCGCCGCCGCCGCCGCGGAGCGGAGGCGGTCGCAGTCGGTCTCGCCGCGGCGCGGCGCGGCGCCGCCGCCGCCGCACCAGCCGCCGCTGCCGGCGAGGCGGCTCTCCGGGGGGTTCGAGGGCGGGGCGCGCGCCTGGGCGCGCGGCTCCGCGTCGTTCCCGCACTCGTCGCCGCTGCAGCGCGAGGGCCGCGCCGCCGCGGCCGCGGGCGGCGGGTTGACGGAGAAGCAGTACACCATGGTGTTGCAGTCTCTGGGGCAGTCC-TACACATTCTTGACCTCGAAGGGAAGATCATGTACTGGAATCGATCTGCAGAGAAACTCTATGGTTATCCAGCATCACAAGCACTTGGTCAGGATGGCCTCATGCTGCTGATTGATTCCTGTGATATCAATGTGGTAAATGACATCTTCCAACGCATATCTCTGGGTGAGAGTTGGACCGGAAAGTTTCCAGTTAAGAACAGAGCTGGAGATAGATTTTCAGCTGTTGCCACCAACACTCCTTTTTATGATGAGGATGGCAGTTTGGTGGGCATTGTTTGCGTTTCAAGTGATTTGCGCACAATGGAGGAGATAATCAGTGGCCCTTCAATCTGTGCAAGGCCCCATCCAGAATCTTCTAGGACCTACTGTGAAGCTAGTTGCAGCAACAGCAATCGCAAAGCCAGTTTGTTGAGCAGAAGCCCATTTGACTCTCAGCAACCTTTGCAGTCTACTATAGCCTCCAAGATAACAAATTTGGCTACGAAGGTCACAAATAAAGTTCGTTCTAGAGTCAGGGCAGATGAAAATGGCATTGAGCGGGAAGGTGGTAGCGGTGAGAGTCATTGTTCTGATCGTGATGCCAAGGAGGAGCCAACGTCTAGTGGAACAACTACGCCAAGAGGGGACGCACCACGCGGAGCCTTTGCTACAGAAGAGAGTTCCCCTGGGAAAACTGCCAAAATGAACAGTGATGAATCAGAAGGAAAAGTAGGGTTCCACAGGATCTTGAGTTCAAAGGCAGAGGCACTGCTGAACAAGAAAGGGATATCATGGCCTTGGAAGGGGCGGGATAACGATGGACCTGATGTGAAGAACCAAGCAACCTGGCCGTGGTTGCATGGGGAGCAAGATGGCAGCCAGAATCATCAGAAAATTTCTGATTCTGCCATAACTCAAGATGGTCAAGGTGCTGAATATAACCAACCTAACAAAAATGAGGCATCAGGTTCCTGGTCCTCTTTCAACAATAACAGCACAAGCAGTGCAAGCAGCACGGGTAGTACTAATAGTAGTGCTCTTTACAAAGTAGATCATGAAGCAGATTGTTTGGATTATGAAATCCTGTGGGAAGACCTTGTCATTGGAGAACAAATTGGTCAAGGCTCGTGTGGAACAGTATATCATGCTTTGTGGTATGGCTCGGATGTGGCTGTTAAAGTTTTCTCTAAGCAAGAATATTCAGAAGAAGTGATACAGACCTTCCGACAAGAGGTATCCCTTATGAAGAAACTACGCCATCCTAATATACTTCTCTTCATGGGTGCGGTTACATCTCCACAACGCCTCTGTATCGTAACAGAGTTCCTCCCACGTGGAAGTTTGTTTCGCTTACTTCAAAGGAACAATACCAAGTTGGATTGGAGACGACGTGTTCACATGGCTTTAGATATTGCAAGGGGGATGAACTATCTTCACCATTCCAGCCCACCTATTATTCATCGGGATTTAAAATCATCCAATCTTTTGGTTGATAAGAACTGGACTGTCAAGGTTGCAGATTTTGGTCTTTCACNGTCTC-AGCGTGAAACATTCCTGACAACAAAAACTGGAAAAGGAACAGTAAGTACCAGCATGCATAATGTGATTAGCAGAAGAGCTTTCCCTTGCAGTTTGCCCTGATTAACTCTATTGATGTTGACTTGATATCCAGCCACAATGGATGGCTCCAGAGGTGTTGCGCAATGAGCCTTCTGACGAGAAGTCTGATGTTTATAGTTATGGGGTCATCCTGTGGGAACTTGTTACTCAGAAGATACCCTGGGAAAATCTTAATTCGATGCAGGTATATTCTTTTGTCTTTAAAACTTATTTTGACCATATGTTTGGTTATAGTTATGACCACTAGATTGTTAAGAGCAATATTTATTTTAGCAGCTTCATGTAATGTAAAAAAATATTTGGATGACAGTTATCGTAGAAGTAAGCAATAGAATTAACCATTTTTGTCGGCTACATTGCTTTTCCTTTCATTTTGGTACTACAACATGAGCTAGGGCCTAGGAGATGGTGCATATGGATGTTGAATCAAACTCTTTGAATGTAATGCTGGTATGATTGTTCANNNNNNNNNNNGNNCT] [+] EMBL CB633139 [TAATCCGCCTCGGGAACCGCGCGAAGGAGCAGCCGCCCTTTGGAGCTCCGAGAGGTCGCGGCCGCGTGGTGGTGGTGATGCCGCGGCGAGCTCGATTTGGTTGAGATTTTGGGCGCCGATTTCGTGGCCGTGGCGGCGTCGTCGTCGGCGTCGGAGATGGAGGCGAGCGGCGAGGAGCTCCTGAAGAAGATCCGGGAGCTGGAGGTGGGGCAAGCGCAGCTCATGCAGGAGATGTCCAAGCTCGGCGGCGCCGCCGCCGCCGCGGAGCGGAGGCGGTCGCAGTCGGTCTCGCCGCGGCGCGGCGCGGCGCCGCCGCCGCCGCACCAGCCGCCGCTGCCGGCGAGGCGGCTCTCCGGGGGGTTCGAGGGCGGGGCGCGCGCCTGGGCGCGCGGCTCCGCGTCGTTCCCGCACTCGTCGCCGCTGCAGCGCGAGGGCCGCGCCGCCGCGGCCGCGGGCGGCGGGTTGACGGAGAAGCAGTACACCATGGTGTTGCAGTCTCTGGGGCAGTCCGTACACATTCTTGACCTCGAAGGGAAGATCATGTACTGGAATCGATCTGCAGAGAAACTCTATGGTTATCCAGCATCACAAGCACTTGGTCAGGATGGCCTCATGCTGCTGATTGATTCCTGTGATATCAATGTGGTAAATGACATCTTCCAACGCATATCTCTGGGTGA ] [+] EMBL AY224435 [ GTTGACGGAGAAGCAGTACACCAGGGTGTTGCAGTCGCTGGGGCAGTCC TACACATTCTTGACCTCGAAGGGAAGATCATGTACTGGAATCGATCTGCAGAGAAACTGTATGGTTATCCAGCATCAGAAGCACTTGGTCAGGATGGCCTCATGCTGCTGATTGATTCCTGTGATATCAATGTGGTAAATGACATCTTCCGACGCATATCTCTGGGTGAGAGTTGGACCGGAAAGTTTCCAGTTAAGAACAGAGCTGGAGATAGATTTTCAGCTGTTGCCACCAACACTCCTTTTTATGATGAGGATGGCAGTTTGGTGGGCATTGTTTGCGTTTCAAGTGATTTGCGCACAATGGAGGAGATAATCAGTGGCCCTTCAATCTGTGCAAGGCCCCATCCAGAATCTTCTAGGACCTACTGTGAAGCTAGTTGCAGCAACAGCAATCGCAAAGCCAGTTTGTTGAGCAGAAGCCCATTTGACTCTCAGCAACCTTTGCAGTCTACTATAGCCTCCAAGATAACAAATTTGGCTACGAAGGTCACAAATAAAGTTCGTTCTAGAGTCAGGGCAGATGAAAATGGCATTGAGCGGGAAGGTGGTAGCGGTGAGAGTCATTGTTCTGATCGTGATGCCAAGGAGGAGCCAACGTCTAGTGGAACAACTACGCCAAGAGGGGACGCACCACGCGGAGCCTTTGCTACAGAAGAGAGTTCCCCTGGGAAAACTGCCAAAATGAACAGTGATGAATCAGAAGGAAAAGTAGGGTTCCACAGGATCTTGAGTTCAAAGGCAGAGGCACTGCTGAACAAGAAAGGGATATCATGGCCTTGGAAGGGGCGGGATAACGATGGACCTGATGTGAAGAACCAAGCAACCTGGCCGTGGTTGCATGGGGAGCAAGATGGCAGCCAGAATCATCAGAAAATTTCTGATTCTGCCATAACTCAAGATGGTCAAGGTGCTGAATATAACCAACCTAACAAAAATGAGGCATCAGGTTCCTGGTCCTCTTTCAACAATAACAGCACAAGCAGTGCAAGCAGCACGGGTAGTACTAATAGTAGTGCTCTTTACAAAGTAGATCATGAAGCAGATTGTTTGGATTATGAAATCCTGTGGGAAGACCTTGTCATTGGAGAACAAATTGGTCAAGGCTCGTGTGGAACAGTATATCATGCTTTGTGGTATGGCTCGGATGTGGCTGTTAAAGTTTTCTCTAAGCAAGAATATTCAGAAGAAGTGATACAGACCTTCCGACAAGAGGTATCCCTTATGAAGAAACTACGCCATCCTAATATACTTCTCTTCATGGGTGCGGTTACATCTCCACAACGCCTCTGTATCGTAACAGAGTTCCTCCCACc ] [+] EMBL CB671585 [ TGGCATCGTGCGGGAAGGTGGTAGCGGTGAGAGTCATTGTTCTGATCGTGATGCCAAGGAGGAGCCAACGTCTAGTGGAACAACTACGCCAAGAGGGGACGCACCACGCGGAGCCTTTGCTACAGAAGAGAGTTCCCCTGGGAAAACTGCCAAAATGAACAGTGATGAATCAGAAGGAAAAGTAGGGTTCCACAGGATCTTGAGTTCAAAGGCAGAGGCACTGCTGAACAAGAAAGGGATATCATGGCCTTGGAAGGGGCGGGATAACGATGGACCTGATGTGAAGAACCAAGCAACCTGGCCGTGGTTGCATGGGGAGCAAGATGGCAGCCAGAATCATCAGAAAATTTCTGATTCTGCCATAACTCAAGATGGTCAAGGTGCTGAATATAACCAACCTAACAAAAATGAGGCATCAGGTTCCTGGTCCTCTTTCAACAATAACAGCACAAGCAGTGCAAGCAGCACGGGTAGTACTAATAGTAGTGCTCTTTACAAAGTAGATCATGAAGCAGATTGTTTGGATTATGAAATCCTGTGGGAAGACCTTGTCATTGGAGAACAAATTGGTCAAGGCTCGTGTGGAACAGTATATCATGCTTTGTGGTATGGCTCGGATGTGGCTGTTAAAGTTTTCTCTAAGCAAGAATATTCAGAAGAAGTGATACAGACCTTCCGACAAGAGGTATCCCTTATGAAGAAACTACGCCATCCTAATATACTTCTCTTCATGGGTGCGGTTACATCTCCACAACGCCTCTGTATCGTAACAGAGTTCCTCCCACGTGGAAGTTTGTTTCG ] [+] EMBL CB624284 [ AACAGTGATGAATCAGAAGGAAAAGTAGGGTTCCACAGGATCTTGAGTTCAAAGGCAGAGGCACTGCTGAACAAGAAAGGGATATCATGGCCTTGGAAGGGGCGGGATAACGATGGACCTGATGTGAAGAACCAAGCGACCTGGCCGTGGTTGCATGGGGAGCAAGATGGCAGCCAGAATCATCAGAAAATTTCTGATTCTGCCATAACTCAAGATGGTCAAGGTGCTGAATATAACCAACCTAACAAAAATGAGGCATCAGGTTCCTGGTCCTCTTTCAACAATAACAGCACAAGCAGTGCAAGCAGCACGGGTAGTACTAATAGTAGTGCTCTTTACAAAGTAGATCATGAAGCAGATTGTTTGGATTATGAAATCCTGTGGGAAGACCTTGTCATTGGAGAACAAATTGGTCAAGGCTCGTGTGGAACAGTATATCATGCTTTGTGGTATGGCTCGGATGTGGCTGTTAAAGTTTTCTCTAAGCAAGAATATTCAGAAGAAGTGATACAGACCTTCCGACAAGAGGTATCCCTTATGAAGAAACTACGCCATCCTAATATACTTCTCTTCATGGGTGCGGTTACATCTCCACAACGCCTCTGTATCGTAACAGAGTTCCTCCCACGTGGAAGTTTGTTTCGCTTACTTCAAAGGAACAATACCAAGTTGGATTGGAGACGACGTGTTCACATGGCTTTAGATATTGCAAGGGGGATGAACTATCTTCACCATTCCAGCCCACCTATTATTCATCGGGATTTAAAATCATCCAATCTTTTGGTTGATAAGAACTGGACTGTCAAGGTTGCAGATTTTGGTCTTTCACNGTCTC AGCGTGAAACATTCCTGAC ] [+] EMBL CF196826 [ AAGAACTGGACTGTCAAGGTTGCAGATTTTGGTCTTTCAC GTCTCAAGCGTGAAACATTCCTGACAACAAAAACTGGAAAAGGAACAGTAAGTACCAGCATGCATAATGTGATTAGCAGAAGAGCTTTCCCTTGCAGTTTGCCCTGATTAACTCTATTGATGTTGACTTGATATCCAGCCACAATGGATGGCTCCAGAGGTGTTGCGCAATGAGCCTTCTGACGAGAAGTCTGATGTTTATAGTTATGGGGTCATCCTGTGGGAACTTGTTACTCAGAAGATACCCTGGGAAAATCTTAATTCGATGCAGGTATATTCTTTTGTCTTTAAAACTTATTTTGACCATATGTTTGGTTATAGTTATGACCACTAGATTGTTAAGAGCAATATTTATTTTAGCAGCTTCATGTAATGTAAAAAAATATTTGGATGACAGTTATCGTAGAAGTAAGCAATAGAATTAACCATTTTTGTCGGCTACATTGCTTTTCCTTTCATTTTGGTACTACAACATGAGCTAGGGCCTAGGAGATGGTGCATATGGATGTTGAATCAAACTCTTTGAATGTAATGCTGGTATGATTGTTCANNNNNNNNNNNGNNCT] consensusID : consensus_11636#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1389 fasta sequence [TTTGTATTTAAAACTTATTTTGACCATATGTTTGGTTATAGTTATGACCACTAGATTGTTAAGAGCAATATTTATTTTAGCAGCTTCATGTAATGTAAAAAAATATTTGGATGACAGTTATCGTAGAAGTAAGCAATAGAATTAACCATTTTTGTCGGCTACATTGCTTTTCCTTTCATTTTGGTACTACAACATGAGCTAGGGCCTAGGAGATGGTGCATATGGATGTTGAATCAAACTCTTTGAATGTAATGCTGGTATGATTGTTCACCCAGAAATTTGAACTTTGGGCTTACAAGAAACAGTTATTGTCTTTTTGTATTTGTGATTTTGTAGAGACCAGAAATTTCCCAAGATAGTGATATTTTACTGAGTAGCCCAGCATGTTTGCGCGTTGTAACTCTTATTGGGCTAATTCTTTCTTATATCATACTTGTTGTCAAAGTTTTGACTAGGGTCGTATTATTTTGTGAGACTGTTTCTTATGTAGGTCATTGGTGCAGTTGGTTTCATGAACCACAGGTTGGAGATTCCTAGTGAAACAGATCCTCAGTGGACATCACTTATCCTGAGTTGTTGGGAAACTGACTCACAACTCCGTCCATCGTTCCAACAACTTCTGGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGAAATGCATCCGCTGCTGCAAAAAATAGCAGCATTGAGGAATGAATGGAGATCCCTTATGAGGCGAACGATCAATTGACACAATTTTGCAGGCGGTGCAGCGACACGCTAGCCTGATCAGGATTCGCACCTCCCGCGTGGTTACTGCTGATGATGCTGATTGATACAGCCATTGCTGAAGATTGAGCAAGACGAGGGAGCTGCCTCCTGAATCCTCTTGGCCTGAAGTTCCACCTGCAGCTTCGGAATTCTGACCAAGGTAGAGAGTACTGGAGCTGAGGCTGGCACTTTTGGTGAATTCTTCCATGACAACTCCAATTTATGCCTAGTCGAATGTCGACCAAGCTCGACTCTGTAACGCGAAGGCGACAATGATCTTGTGTAGATTGTTCTGACGATCGACAACCAAATTGTATTCGAGTTGCTGATCCTGATTATGCATGAAAGTTGCACCATCAACATTGTAAGGTTCAACCTGTTCTTTTGTTCTGCTCTGATTCCTTCTCTGTTACTGTAACCATGTTGTTTAGAATCCCATCAGAACCCAATCATTCTTGCTACTTCGACCATGGATGGAAGAAATATGGAATTGTGCCTTCAATTTCACATTATTCAAACTTTGGCTGCAAATAATTTAAATGTCATCTAAGAAATACCCAGTAGCATTATTAGATTTGACATCTGTTTTTAAGTTTTAACACGAATTTATTCATAAA] [+] EMBL AK100149 [TTTGTATTTAAAACTTATTTTGACCATATGTTTGGTTATAGTTATGACCACTAGATTGTTAAGAGCAATATTTATTTTAGCAGCTTCATGTAATGTAAAAAAATATTTGGATGACAGTTATCGTAGAAGTAAGCAATAGAATTAACCATTTTTGTCGGCTACATTGCTTTTCCTTTCATTTTGGTACTACAACATGAGCTAGGGCCTAGGAGATGGTGCATATGGATGTTGAATCAAACTCTTTGAATGTAATGCTGGTATGATTGTTCACCCAGAAATTTGAACTTTGGGCTTACAAGAAACAGTTATTGTCTTTTTGTATTTGTGATTTTGTAGAGACCAGAAATTTCCCAAGATAGTGATATTTTACTGAGTAGCCCAGCATGTTTGCGCGTTGTAACTCTTATTGGGCTAATTCTTTCTTATATCATACTTGTTGTCAAAGTTTTGACTAGGGTCGTATTATTTTGTGAGACTGTTTCTTATGTAGGTCATTGGTGCAGTTGGTTTCATGAACCACAGGTTGGAGATTCCTAGTGAAACAGATCCTCAGTGGACATCACTTATCCTGAGTTGTTGGGAAACTGACTCACAACTCCGTCCATCGTTCCAACAACTTCTGGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGAAATGCATCCGCTGCTGCAAAAAATAGCAGCATTGAGGAATGAATGGAGATCCCTTATGAGGCGAACGATCAATTGACACAATTTTGCAGGCGGTGCAGCGACACGCTAGCCTGATCAGGATTCGCACCTCCCGCGTGGTTACTGCTGATGATGCTGATTGATACAGCCATTGCTGAAGATTGAGCAAGACGAGGGAGCTGCCTCCTGAATCCTCTTGGCCTGAAGTTCCACCTGCAGCTTCGGAATTCTGACCAAGGTAGAGAGTACTGGAGCTGAGGCTGGCACTTTTGGTGAATTCTTCCATGACAACTCCAATTTATGCCTAGTCGAATGTCGACCAAGCTCGACTCTGTAACGCGAAGGCGACAATGATCTTGTGTAGATTGTTCTGACGATCGACAACCAAATTGTATTCGAGTTGCTGATCCTGATTATGCATGAAAGTTGCACCATCAACATTGTAAGGTTCAACCTGTTCTTTTGTTCTGCTCTGATTCCTTCTCTGTTACTGTAACCATGTTGTTTAGAATCCCATCAGAACCCAATCATTCTTGCTACTTCGACCATGGATGGAAGAAATATGGAATTGTGCCTTCAATTTCACATTATTCAAACTTTGGCTGCAAATAATTTAAATGTCATCTAAGAAATACCCAGTAGCATTATTAGATTTGACATCTGTTTTTAAGTTTTAACACGAATTTATTCATAAA] [-] EMBL CB624285 [ tgnGAGATTCCTAGTGAAACAGATCCTCAGTGGACATCACTTATCCTGAGTTGTTGGGAAACTGACTCACAACTCCGTCCATCGTTCCAACAACTTCTGGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGAAATGCATCCGCTGCTGCAAAAAATAGCAGCATTGAGGAATGAATGGAGATCCCTTATGAGGCGAACGATCAATTGACACAATTTTGCAGGCGGTGCAGCGACACGCTAGCCTGATCAGGATTCGCACCTCCCGCGTGGTTACTGCTGATGATGCTGATTGATACAGCCATTGCTGAAGATTGAGCAAGACGAGGGAGCTGCCTCCTGAATCCTCTTGGCCTGAAGTTCCACCTGCAGCTTCGGAATTCTGACCAAGGTAGAGAGTACTGGAGCTGAGGCTGGCACTTTTGGTGAATTCTTCCATGACAACTCCAATTTATGCCTAGTCGAATGTCGACCAAGCTCGACTCTGTAACGCGAAGGCGACAATGATCTTGTGTAGATTGTTCTGACGATCGACAACCAAATTGTATTCGAGTTGCTGATCCTGATTATGCATGAAAGTTGCACCATCAACATTGTAAGGTTCAACCTGTTCTTTTGTTCTGCTCTGATTCCTTCTCTGTTACTGTAACCATGTTGTTTAGAATCCCATCAGAACCCAATCATTCTTGCTACTTCGACCATGGATGGAAGAAATATGGAATTGTGCCTTCAATTTCACATTATT ] [-] EMBL CB633140 [ TTCCTAGTGAAACAGATCCTCAGTGGACATCACTTATCCTGAGTTGTTGGGAAACTGACTCACAACTCCGTCCATCGTTCCAACAACTTCTGGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGAAATGCATCCGCTGCTGCAAAAAATAGCAGCATTGAGGAATGAATGGAGATCCCTTATGAGGCGAACGATCAATTGACACAATTTTGCAGGCGGTGCAGCGACACGCTAGCCTGATCAGGATTCGCACCTCCCGCGTGGTTACTGCTGATGATGCTGATTGATACAGCCATTGCTGAAGATTGAGCAAGACGAGGGAGCTGCCTCCTGAATCCTCTTGGCCTGAAGTTCCACCTGCAGCTTCGGAATTCTGACCAAGGTAGAGAGTACTGGAGCTGAGGCTGGCACTTTTGGTGAATTCTTCCATGACAACTCCAATTTATGCCTAGTCGAATGTCGACCAAGCTCGACTCTGTAACGCGAAGGCGACAATGATCTTGTGTAGATTGTTCTGACGATCGACAACCAAATTGTATTCGAGTTGCTGATCCTGATTATGCATGAAAGTTGCACCATCAACATTGTAAGGTTCAACCTGTTCTTTTGTTCTGCTCTGATTCCTTCTGGGTTACTGTAACCATGTTGTTTAGAATCCCATCAGAACCCAATCATTCTTGCTA ] consensusID : consensus_11636#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 772 fasta sequence [ACATTCCTGACAACAAAAACTGGAAAAGGAACACCACAATGGATGGCTCCAGAGGTGTTGCGCAATGAGCCTTCTGACGAGAAGTCTGATGTTTATAGTTATGGGGTCATCCTGTGGGAGCTTGTTACTCAGAAGATACCCTGGGAAAATCTTAATTCGATGCAGGTCATTGGTGCAGTTGGTTTCATGAACCACAGGTTGGAGATTCCTAGTGAAACAGATCCTCAGTGGACATCACTTATCCTGAGTTGTTGGGAAACTGACTCACAACTCCGTCCATCGTTCCAACAACTTCTGGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGACACGCTAGCCTGATCAGGATTCGCACCTCCCGCGTGGTTACTGCTGATGATGCTGATTGATACAGCCATTGCTGAAGATTGAGCAAGACGAGGGAGCTGCCTCCTGAATCCTCTTGGCCTGAAGTTCCACCTGCAGCTTCGGAATTCTGACCAAGGTAGAGAGTACTGGAGCTGAGGCTGGCACTTTTGGTGAATTCTTCCATGACAACTCCAATTTATGCCTAGTCGAATGTCGACCAAGCTCGACTCTGTAACGCGAAGGCGACAATGATCTTGTGTAGATTGTTCTGACGATCGACAACCAAATTGTATTCGAGTTGCTGATCCTGATTATGCATGAAAGTTGCACCATCAACATTGTAAGGTTCAACCTGTTATGTTGTTCTGCTCTGATTCCTTCTCTGTTACTGTAAAAAAAAGA] [-] EMBL CB671586 [ACATTCCTGACAACAAAAACTGGAAAAGGAACACCACAATGGATGGCTCCAGAGGTGTTGCGCAATGAGCCTTCTGACGAGAAGTCTGATGTTTATAGTTATGGGGTCATCCTGTGGGAGCTTGTTACTCAGAAGATACCCTGGGAAAATCTTAATTCGATGCAGGTCATTGGTGCAGTTGGTTTCATGAACCACAGGTTGGAGATTCCTAGTGAAACAGATCCTCAGTGGACATCACTTATCCTGAGTTGTTGGGAAACTGACTCACAACTCCGTCCATCGTTCCAACAACTTCTGGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGACACGCTAGCCTGATCAGGATTCGCACCTCCCGCGTGGTTACTGCTGATGATGCTGATTGATACAGCCATTGCTGAAGATTGAGCAAGACGAGGGAGCTGCCTCCTGAATCCTCTTGGCCTGAAGTTCCACCTGCAGCTTCGGAATTCTGACCAAGGTAGAGAGTACTGGAGCTGAGGCTGGCACTTTTGGTGAATTCTTCCATGACAACTCCAATTTATGCCTAGTCGAATGTCGACCAAGCTCGACTCTGTAACGCGAAGGCGACAATGATCTTGTGTAGATTGTTCTGACGATCGACAACCAAATTGTATTCGAGTTGCTGATCCTGATTATGCATGAAAGTTGCACCATCAACATTGTAAGGTTCAACCTGTTATGTTGTTCTGCTCTGATTCCTTCTCTGTTACTGTAAAAAAAAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 TAATCCGCCTCGGGAACCGCGCGAAGGAGCAGCCGCCCTTTGGAGCTCCGAGAGGTCGCG 60 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 GCCGCGTGGTGGTGGTGATGCCGCGGCGAGCTCGATTTGGTTGAGATTTTGGGCGCCGAT 120 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 TTCGTGGCCGTGGCGGCGTCGTCGTCGGCGTCGGAGATGGAGGCGAGCGGCGAGGAGCTC 180 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 CTGAAGAAGATCCGGGAGCTGGAGGTGGGGCAAGCGCAGCTCATGCAGGAGATGTCCAAG 240 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 CTCGGCGGCGCCGCCGCCGCCGCGGAGCGGAGGCGGTCGCAGTCGGTCTCGCCGCGGCGC 300 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 GGCGCGGCGCCGCCGCCGCCGCACCAGCCGCCGCTGCCGGCGAGGCGGCTCTCCGGGGGG 360 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 TTCGAGGGCGGGGCGCGCGCCTGGGCGCGCGGCTCCGCGTCGTTCCCGCACTCGTCGCCG 420 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 CTGCAGCGCGAGGGCCGCGCCGCCGCGGCCGCGGGCGGCGGGTTGACGGAGAAGCAGTAC 480 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 ACCATGGTGTTGCAGTCTCTGGGGCAGTCCTACACATTCTTGACCTCGAAGGGAAGATCA 540 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 TGTACTGGAATCGATCTGCAGAGAAACTCTATGGTTATCCAGCATCACAAGCACTTGGTC 600 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 AGGATGGCCTCATGCTGCTGATTGATTCCTGTGATATCAATGTGGTAAATGACATCTTCC 660 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 AACGCATATCTCTGGGTGAGAGTTGGACCGGAAAGTTTCCAGTTAAGAACAGAGCTGGAG 720 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 ATAGATTTTCAGCTGTTGCCACCAACACTCCTTTTTATGATGAGGATGGCAGTTTGGTGG 780 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 GCATTGTTTGCGTTTCAAGTGATTTGCGCACAATGGAGGAGATAATCAGTGGCCCTTCAA 840 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 TCTGTGCAAGGCCCCATCCAGAATCTTCTAGGACCTACTGTGAAGCTAGTTGCAGCAACA 900 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 GCAATCGCAAAGCCAGTTTGTTGAGCAGAAGCCCATTTGACTCTCAGCAACCTTTGCAGT 960 consensus_11636#1 ------------------------------------------------------------ consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 CTACTATAGCCTCCAAGATAACAAATTTGGCTACGAAGGTCACAAATAAAGTTCGTTCTA 1020 consensus_11636#1 -----------------------------------------------------------T 1 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 GAGTCAGGGCAGATGAAAATGGCATTGAGCGGGAAGGTGGTAGCGGTGAGAGTCATTGTT 1080 consensus_11636#1 TTGTATTTAAAACTTATTTTGACCATATGTTTGGTT--ATAGTTATGACCACTAGAT--- 56 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 CTGATCGTGATGCCAAGGAGGAGCCAACGTCTAGTGGAACAACTACGCCAAGAGGGGACG 1140 consensus_11636#1 TGTTAAGAGCAATATTTATTTTAGCAGCTTCATGTAATGTAAAAAAATATTTGGATGACA 116 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 CACCACGCGGAGCCTTTGCTACAGAAGAGAGTTCCCCTGGGAAAACTGCCAAAATGAACA 1200 consensus_11636#1 GTTATCG-TAGAAGTAAGCAATAGAATTAACCATTTTTGTCGGCTACATTGCTTTTCCTT 175 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 GTGATGAATCAGAAGGAAAAGTAGGGTTCCACAGGATCTTGAGTTCAAAGGCAGAGGCAC 1260 consensus_11636#1 TCATTTTGGTACTACAACATGAGCTAGGGCCTAGGAGATGGTGCATATGGATGTTGAATC 235 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 TG--CTGAACAAGAAAGGGATATCATGGCCTTGGAAGGGGCGGGATAACGATGGACCTGA 1318 consensus_11636#1 AAACTCTTTGAATGTAATGCTGGTATGATTGTTCACCCAGAAATTTGAACTTTGGGCTTA 295 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 TGTGAAGAACCAAGCAACCTGGCCGTGGTTGCATGGGGAGCAAGATGGCAGCCAGAATCA 1378 consensus_11636#1 CAAGAAACAGTTATTGTCTTTTTGTATTTGTGATTTTGTAGAGACCAGA-------AATT 348 consensus_11636#2 --------------------------------ACATTCCTGACAACAAA-------AACT 21 consensus_11636#0 TCAGAAAATTTCTGATTCTGCCATAACTCAAGATGGTCAAGGTGCTGAATATAACCAACC 1438 * * * * ** consensus_11636#1 TCCCAAGATAGTGATATTT--TACTGAGTAGCCCAGCATGT-TTGC-GCGTTGTAACTCT 404 consensus_11636#2 ----GGAAAAGGAACACCA--CAATGGATGGCTCCAGAGGTGTTGC-GCAATGAGCCTTC 74 consensus_11636#0 TAACAAAAATGAGGCATCAGGTTCCTGGTCCTCTTTCAACAATAACAGCACAAGCAGTGC 1498 * * * * * * * ** * consensus_11636#1 TATTGGGCTAATTCTTTCTTATA-TCATA----CTTGTTGTCAAAGTTT-TGACTAGGGT 458 consensus_11636#2 TGACGAGAAGTCTGATGTTTATAGTTATGGGGTCATCCTGTGGGAGCTTGTTACTCAGAA 134 consensus_11636#0 AAGCAGCACGGGTAGTACTAATAGTAGTG--CTCTTTACAAAGTAGATCATGAAGCAGAT 1556 * * * *** * * * * ** * * * * consensus_11636#1 CGTATTA-TTTTGTGAGACTGTTTCTTATGTAGGTCATTGGTGCA---GTTGGTT----- 509 consensus_11636#2 GATACC--CTGGGAAAATCTTAATTCGATGCAGGTCATTGGTGCA---GTTGGTT----- 184 consensus_11636#0 TGTTTGGATTATGAAATCCTGTGGGAAGACCTTGTCATTGGAGAACAAATTGGTCAAGGC 1616 * * * * ** ******** * * ***** consensus_11636#1 TCATGAACCACAGGTTGGAGATTCCTAGTGAAACAGATCCTCAGTGGACATCA---CTTA 566 consensus_11636#2 TCATGAACCACAGGTTGGAGATTCCTAGTGAAACAGATCCTCAGTGGACATCA---CTTA 241 consensus_11636#0 TCGTGTGGAACAGTATATC-ATGCTTTGTGGTATGGCTCGGATGTGGCTGTTAAAGTTTT 1675 ** ** **** * ** * * *** * * ** **** * * ** consensus_11636#1 TCCTGAGT-----TGTTGGGAAACTGACTCACAACTCCGTCCATCGTTCCAACAACTTCT 621 consensus_11636#2 TCCTGAGT-----TGTTGGGAAACTGACTCACAACTCCGTCCATCGTTCCAACAACTTCT 296 consensus_11636#0 CTCTAAGCAAGAATATTCAGAAGAAGTGATACAGACCTTCCGACAAGAGGTATCCCTTAT 1735 ** ** * ** *** * *** * * * * *** * consensus_11636#1 GGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGAAATGC 681 consensus_11636#2 GGAGAGACTTCGAGAGCTGCAAAGGCAGTACAATGTCCAGACTCAGATGCAGCGA----- 351 consensus_11636#0 GAAGAAACTACGCCATC--CTAATATACTTCTCTTCATGGGTGCGGTTACATCTCCACAA 1793 * *** *** ** * * * ** * * * * * * * * ** * consensus_11636#1 ATCCGCTGCTGCAAAAAATAGCAGCATTGAGGAATGAATGGAGATCCCTTATGAGGCGAA 741 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 CGCCTCTGTATCGTAACAGAGTTCCTCCCACGTGGAAGTTTGTTTCGCTTACTTCA-AAG 1852 consensus_11636#1 CGATCAATTGACACAATTTTGCAGGCGGTGCAGCGACACG---CTAGCC----------- 787 consensus_11636#2 ------------------------------------CACG---CTAGCC----------- 361 consensus_11636#0 GAACAATACCAAGTTGGATTGGAGACGACGTGTTCACATGGCTTTAGATATTGCAAGGGG 1912 ** * *** consensus_11636#1 --TGATCAGGATTCGCACCTCCCGCGTGGTTACTGCTGAT---GATGCTGATTGATACAG 842 consensus_11636#2 --TGATCAGGATTCGCACCTCCCGCGTGGTTACTGCTGAT---GATGCTGATTGATACAG 416 consensus_11636#0 GATGAACTATCTTCACCATTCCAGCCCACCTATTATTCATCGGGATTTAAAATCATCCAA 1972 *** * *** * *** ** ** * * ** *** * * ** ** consensus_11636#1 CC-----ATTGCTGAAGATTGAGC----AAGACGAGGGAGCTGCCTCCTGAATCCTCTTG 893 consensus_11636#2 CC-----ATTGCTGAAGATTGAGC----AAGACGAGGGAGCTGCCTCCTGAATCCTCTTG 467 consensus_11636#0 TCTTTTGGTTGATAAGAACTGGACTGTCAAGGTTGCAGATTTTGGTCTTTCACNGTCTCA 2032 * *** * * * ** * *** ** * ** * * *** consensus_11636#1 GCCTGAAGTTCCACCTGCAGCTTCGGAATTCTGACCAAGGTAGAGAGTACTGGAGC---- 949 consensus_11636#2 GCCTGAAGTTCCACCTGCAGCTTCGGAATTCTGACCAAGGTAGAGAGTACTGGAGC---- 523 consensus_11636#0 GCGTGAAACATTCCTGACAAC--AAAAACTGGAAAAGGAACAGTAAGTACCAGCATGCAT 2090 ** **** * ** * ** * * ** ***** * consensus_11636#1 --TGAGGCTGGCA-------CTTTTGGTGAATTCTTCCATGACAACTCCAATTTATGCCT 1000 consensus_11636#2 --TGAGGCTGGCA-------CTTTTGGTGAATTCTTCCATGACAACTCCAATTTATGCCT 574 consensus_11636#0 AATGTGATTAGCAGAAGAGCTTTCCCTTGCAGTTTGCCCTGATTAACTCTATTGATGTTG 2150 ** * * *** ** ** * * * ** *** * * *** *** consensus_11636#1 AGTCGAATGTCGACCAAGCTCGA---CTC------TGTAACGCGAAGG------CGACAA 1045 consensus_11636#2 AGTCGAATGTCGACCAAGCTCGA---CTC------TGTAACGCGAAGG------CGACAA 619 consensus_11636#0 ACTTGATATCCAGCCACAATGGATGGCTCCAGAGGTGTTGCGCAATGAGCCTTCTGACGA 2210 * * ** * *** * ** *** *** *** * * *** * consensus_11636#1 TGA-TCTTGTGTAGATTGTTCTGACG--ATCGACAACCAAATTGT-ATTCG--AGTTGCT 1099 consensus_11636#2 TGA-TCTTGTGTAGATTGTTCTGACG--ATCGACAACCAAATTGT-ATTCG--AGTTGCT 673 consensus_11636#0 GAAGTCTGATGTTTATAGTTATGGGGTCATCCTGTGGGAACTTGTTACTCAGAAGATACC 2270 * *** *** ** *** ** * *** ** **** * ** ** * * consensus_11636#1 -------GATCCTGATT--ATGCATGAAAGTTGCACCATCAACATTGTAAGGTTCAACCT 1150 consensus_11636#2 -------GATCCTGATT--ATGCATGAAAGTTGCACCATCAACATTGTAAGGTTCAACCT 724 consensus_11636#0 CTGGGAAAATCTTAATTCGATGCAGGTATATTCTTTTGTCTTTAAAACTTATTTTGACCA 2330 *** * *** ***** * * ** ** * ** *** consensus_11636#1 GTTCTTTTGTTCT-GCTCTGATTCCTTCTCTGTTACTGTAACCATGTTGTTTAGAATCCC 1209 consensus_11636#2 GTTATGTTGTTCT-GCTCTGATTCCTTCTCTGTTACTGTAAAAAAAAGA----------- 772 consensus_11636#0 TATGTTTGGTTATAGTTATGACCACTAGATTGTTAAGAGCAATATTTATTTTAGCAGCTT 2390 * * * *** * * * *** ** ***** * * consensus_11636#1 ATCAGAACCCAAT----CATTCTTGCTACTTCGACCATGGATGGAAGAAATATGG----- 1260 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 CATGTAATGTAAAAAAATATTTGGATGACAGTTATCGTAGAAGTAAGCAATAGAATTAAC 2450 consensus_11636#1 -AATTGTGCCTTCAATTTCACATTATTCAAACTTTGGCTGCAAATAATTTAAATGTCATC 1319 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 CATTTTTGTCGGCTACATTGCTTTTCCTTTCATTTTGGTACTACAACATGAGCTAGGGCC 2510 consensus_11636#1 TAAGAAATACCCAGTAGCATTATTAGATTTGACATCTGTTTTTAAGTTTTAACACGAATT 1379 consensus_11636#2 ------------------------------------------------------------ consensus_11636#0 TAGGAGATGGTGCATATGGATGTTGAATCAAACTCTTTGAATGTAATGCTGGTATGATTG 2570 consensus_11636#1 TATTCATAAA---------- 1389 consensus_11636#2 -------------------- consensus_11636#0 TTCANNNNNNNNNNNGNNCT 2590 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||