These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11654#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2684 fasta sequence [TTGGAAGTCAGGGAAATATATCAAATATGTCTTCCCAACAGAGCACAGATCTGTCTGCCCAACAAAATCTAGCACCTTCACCACTTCCACCTGCAGAAGCAGAACGAACAGGTTTGCTTACCACACAGCCAGCTCAGAATTTCCAACCTGAATTGCAACCATCAACCTCATTGTTTGATGCTTCACTTGAAAGTAACAACATAAGTCAAACAGATTGTCAATCAGATCGAGCAGTTGTTTTCTTGCAGGAAGGTGCAACAACTCAACAACATTTACTTGATACCGGAGTTGTAGTTGATGACATTGTTGCCGAAGAGCCTTCACACTCAGAATCTCCAACTTACATCATTCACGAAACAGCTGCCTTGGTAGTTTCGACAGAAGTTGAAACTCAGACTTGTCAATCAAATATACCTATACAACAAAATACAAGCCACCCTGCCCAACAAAGTCCAGAAACTTCACGACATTCAATTGCAAGTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGCTCAGCAATTCAGGATTTACAGCCAGAAATGCAACCTCCAAACTCAGTGCAGGGTCAGTATCCAGGAGCAGTATTGTGCATTGCTGCAGCTGAAGATTTGCAGCCTTTAATGCAATCATCAACCCCAGTGCCAAATCAACTTGCAGAGGCAAATCAAGAAGGTATGTTGAGTGCTGCAGCAGCTCA-GAATTTGCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGATCTGTCTGGTATTCCTGTGCCACGAAGTATTACTACTGCCCATCAAAGTGTAGTGCCTTCATGGGATCTGCAGACAGGAGTAGAACCAACGGGTGCTTTGTGCATGGAAACAACACATGAAAGGCAGTCTGAACTACCATCAGGTTCAATGCAAGAGCGATCTGCAGAAACAAGAGCAAACTTAGTGCAGCGATCTTGCACGACAGANACTTGTGATTTGCAGCCCCAACTGGATCTATCATCCACAATACAGACTGTCCAACTTGAAGGAATACGCTCTGAAGACATGAATCAGATAGGTGTTCAGTCCAACTCTGCACTAAGTTCTGAACAGCCCACCCAGCCTCTTCCAGTGGCACCATTAGTGTTTAATTATCAAAGATTTAGTGACGAACCTCTCAAAAATGAGCTGGAAAGATTAAAACATACCAGCAATGTTCTTAGTAAAGTTCATGAACAAAAGAGAAAACAACTCCTAGTGGAGTATAACCAAGAAATGGAGAAGCTAAAACAGAAATATGACTCATTACTTCAAAAGGAAGATTCTTTTTACGCTCAGAAGGAGGCAGAACTTGATACTATCTACAGGAAAGTCTTTATAAACCAATCACTGGCTGAGAATTTTCGAAGGAAATTCCTACCATTATCTGCAGCTCAAGGGGGATCCACGAGACCCACAATTGGGCAGCTGGTTCAGTCTTCTCAGGAACCATCTGCAAGGATTGTAGCAGAGCAAGTCACAGCATCACCAGTTACCTTGTCATCAGCAGTTCGACCACAGGTGCTTCATTCATCAGGACCATATGTGCAACCTTCACTGGTGGTTCAACCATCATCACAGGCTACCCAACC-GCAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCCTATGCCACATGGCACCTACAGAGCTGCTGGGGCACAACCGCATGCTCCCTCTCCTCATCTCCAGCAGCTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCTGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGACGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAGTATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGACGGGTGCTAACATCAATTTGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAATATCAAACCTTGTTGATACGGGTCTGGAAATGTTGAGGTTACCCCTTTTCCTGCTGAAGATAATATGATGGGCTGCTGATATTTTTTTTGTTCTGACATGTGGGTATTGTCTCTGCTATCTCATTGACAGTAAGGGGCTTTACTGTCAATGAGTTGACCTGTTGTAGCATTGGATCCAGTCTGTCAACCCTGTTGTTACAGAAATGTGAGTGTTTTTTTAGTTGGAAATGTGGGTGCATTTTGTATATTGCTTAATCTTAGTGGCACATGCTGGTGCATGTTACGACGTTTATTTTGATTTTTGAAGACTTGTGGATGT] [+] EMBL CF306574 [TTGGAAGTCAGGGAAATATATCAAATATGTCTTCCCAACAGAGCACAGATCTGTCTGCCCAACAAAATCTAGCACCTTCACCACTTCCACCTGCAGAAGCAGAACGAACAGGTTTGCTTACCACACAGCCAGCTCAGAATTTCCAACCTGAATTGCAACCATCAACCTCATTGTTTGATGCTTCACTTGAAAGTAACAACATAAGTCAAACAGATTGTCAATCAGATCGAGCAGTTGTTTTCTTGCAGGAAGGTGCAACAACTCAACAACATTTACTTGATACCGGAGTTGTAGTTGATGACATTGTTGCCGAAGAGCCTTCACACTCAGAATCT ] [+] EMBL CF306271 [TTGGAAGTCAGGGAAATATATCAAATATGTCTTCCCAACAGAGCACAGATCTGTCTGCCCAACAAAATCTAGCACCTTCACCACTTCCACCTGCAGAAGCAGAACGAACAGGTTTGCTTACCACACAGCCAGCTCAGAATTTCCAACCTGAATTGCAACCATCAACCTCATTGTTTGATGCTTCACTTGAAAGTAACAACATAAGTCAAACAGATTGTCAATCAGATCGAGCAGTTGTTTTCTTGCAGGAAGGTGCAACAACTCAACAACATTTACTTGATACCGGAGTTGTAGTTGATGACATTGTTGCCGAAGAGCCTTCACACTCAGAATCTCCAACTTACATCATTCACGAAACAGCTGCCTTGGTAGTTTCGACAGAAGTTGAAACTCAGACTTGTCAATCAAATATACCTATACAACAAAATACAAGCCACCCTGCCCAACAAAGTCCAGAAACTTCACGACATTCAATTGCAAGTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGC ] [+] EMBL CB639935 [ GTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGCTCAGCAATTCAGGATTTACAGCCAGAAATGCAACCTCCAAACTCAGTGCAGGGTCAGTATCCAGGAGCAGTATTGTGCATTGCTGCAGCTGAAGATTTGCAGCCTTTAATGCAATCATCAACCCCAGTGCCAAATCAACTTGCAGAGGCAAATCAAGAAGGTATGTTGAGTGCTGCAGCAGCTCA GAATTTGCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGATCTGTCTGGTATTCCTGTGCCACGAAGTATTACTACTGCCCATCAAAGTGTAGTGCCTTCATGGGATCTGCAGACAGGAGTAGAACCAACGGGTGCTTTGTGCATGGAAACAACACATGAAAGGCAGTCTGAACTACCATCAGGTTCAATGCAAGAGCGATCTGCAGAAACAAGAGCAAACTTAGTGCAGCG ] [+] EMBL CB639936 [ GTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGCTCAGCAATTCAGGATTTACAGCCAGAAATGCAACCTCCAAACTCAGTGCATGGTCAGTATCCAGGAGCAGTATTGTGCATTGCTGCAGCTGAAGATTTGCAGCCTTTAATGCAATCATCAACCCCAGTGCCAAATCAACTTGCAGAGGCAAATCAAGAAGGTATGTCGAGTGCTGCACCAGCTCATCAATTTGCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGACCTGCCTGGTAT ] [+] EMBL CB639850 [ GTCCTGTAGGTTTAGAGGCAACTCAGGAATTTCAGCCTGAAATGCAGCCATCAACCTCAGGTCAGGATCAATCTGAAGAGCTGGAACAAGAAGGTATGTCGAGCTCAGCAATTCAGGATTTACAGCCAGAAATGCAACCTCCAAACTCAGTGCAGGGTCAGTATCCAGGAGCAGTATTGTGCATTGCTGCAGCTGAAGATTTGCAGCCTTTAATGCAATCATCAACCCCAGTGCCAAATCAACTTGCAGAGGCAAATCAAGAAGGTATGTTGAGTGCTGCAGCAGCTCA GAATTTGCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGATCTGTCTGGTATTCCTGTGCCACGAAGTATTACTACTGCCCATCAAAGTGTAGTGCCTTCATGGGATCTGCAGACAGGAGTAGAACCAACGGGTGCTTTGTGCATGGAAACAACACATGAAAGGCAGTCTGAACTACCATCAGGTTCAATGCAAGAGCGATCTGCAGAAACAAGAGCAAACTTAGTGCAGCGATCTTGCACGACAGANACTTGTGATTTGCAGCCCCAACTGGATCTATCATCCACAATACAGACTGTCCAACTTGAAGGAATACGCTC ] [+] EMBL AK058383 [ GCAATGTGAGACACAGAGATTAACCTCAACACAGGATGCTCCATTTGAAAGGACTGATCTGTCTGGTATTCCTGTGCCACGAAGTATTACTACTGCCCATCAAAGTGTAGTGCCTTCATGGGATCTGCAGACAGGAGTAGAACCAACGGGTGCTTTGTGCATGGAAACAACACATGAAAGGCAGTCTGAACTACCATCAGGTTCAATGCAAGAGCGATCTGCAGAAACAAGAGCAAACTTAGTGCAGCGATCTTGCACGACAGAAACTTGTGATTTGCAGCCCCAACTGGATCTATCATCCACAATACAGACTGTCCAACTTGAAGGAATACGCTCTGAAGACATGAATCAGATAGGTGTTCAGTCCAACTCTGCACTAAGTTCTGAACAGCCCACCCAGCCTCTTCCAGTGGCACCATTAGTGTTTAATTATCAAAGATTTAGTGACGAACCTCTCAAAAATGAGCTGGAAAGATTAAAACATACCAGCAATGTTCTTAGTAAAGTTCATGAACAAAAGAGAAAACAACTCCTAGTGGAGTATAACCAAGAAATGGAGAAGCTAAAACAGAAATATGACTCATTACTTCAAAAGGAAGATTCTTTTTACGCTCAGAAGGAGGCAGAACTTGATACTATCTACAGGAAAGTCTTTATAAACCAATCACTGGCTGAGAATTTTCGAAGGAAATTCCTACCATTATCTGCAGCTCAAGGGGGATCCACGAGACCCACAATTGGGCAGCTGGTTCAGTCTTCTCAGGAACCATCTGCAAGGATTGTAGCAGAGCAAGTCACAGCATCACCAGTTACCTTGTCATCAGCAGTTCGACCACAGGTGCTTCATTCATCAGGACCATATGTGCAACCTTCACTGGTGGTTCAACCATCATCACAGGCTACCCAACC GCAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCCTATGCCACATGGCACCTACAGAGCTGCTGGGGCACAACCGCATGCTCCCTCTCCTCATCTCCAGCAGCTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCTGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGACGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAGTATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGACGGGTGCTAACATCAATTTGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAATATCAAACCTTGTTGATACGGGTCTGGAAATGTTGAGGTTACCCCT ] [+] EMBL AK061065 [ ATGTGCAACCTTCACTGGTGGTTCAACCATCATCACAGGCTACCCAACC GCAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCCTATGCCACATGGCACCTACAGAGCTGCTGGGGCACAACCGCATGCTCCCTCTCCTCATCTCCAGCAGCTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCTGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGACGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAGTATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGACGGGTGCTAACATCAATTTGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAATATCAAACCTTGTTGATACGGGTCTGGAAATGTTGAGGTTACCCCTTTTCCTGCTGAAGATAATATGATGGGCTGCTGATATTTTTTTTGTTCTGACATGTGGGTATTGTCTCTGCTATCTCATTGACAGTAAGGGGCTTTACTGTCAATGAGTTGACCTGTTGTAGCATTGGATCCAGTCTGTCAACCCTGTTGTTACAGAAATGTGAGTGTTTTTTTAGTTGGAAATGTGGGTGCATTTTGTATATTGCTTAATCTTAGTGGCACATGCTGGTGCATGTTACGACGTTTATTTTGATTTTTGAAGACTTGTGGATGT] [-] EMBL CB650673 [ AGGCTACCCAACC GCAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCNTATGCCACATGGCACCTACAGAGCTGCTGGGGCACAACCGCATGCTCCCTCTCCTCATCTCCAGCAGCTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCTGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGACGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAGTATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGACGGGTGCTAACATCAATTTGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAATATCAAACCTTGTTGATACGGGTCTGGAAATGTTGAGGTTACCCCTTTTCCTGCTGAAGATAATATGATGGGCTGCTGATATTTTTTTTGTT ] [-] EMBL CA760058 [ aCCAACCGGGAGTCAATCTTACCTGGCAATATGTATAGAGCAATGTCATCATCACCTTTTAGTAGTACACCAATGCCTATGCCACATGGCACCTACAGAGCTTTTGGGGCACAACGNCATGCTCCCTCTCCTCATCTCCAGCAACTTAGGATGCCGTCACCTTATGCCACGAGTCATGGAAATCAGCACCAACGACCATCTATCCTAGCATCCCTACTGCCATTTGTGCTCCCATCTAGTTCAAATCCTAGCCTCACGGCACCCCCGTCATTGAACACGGTTGTTCACAGGACCTCAGGTCCACTGAATGCAGGTGCTGGAAGCCAGCACGCTGGATCTCAAATTTCAGGTGTCAATCCCTCAGGTTCTTCTGCATCAGCATCACTGAATACATGGCTAACAGCTAGGCTTGCGCTGACTAGTGAGGCCAGAGGGACGGTCTCCAGCACAGAGGTTGTGTGCCTTTCTGATGATGAATCGTAGTGAGGAAGGTTCAGTCAAATTGTAGGTTACTAGTGCAATAGTTAACTGATTTGAGTTATAGTCGATCTAACCCCTTTAATATTCTGATAGCAAGAGACGGACATCAATAGAAGTACAGTGGGTCGGGGTTTCTTTTTTGGGGGATGAC GGTGCTAACATCAATTCGAATATCCATCTTGTATAATCAGTCTACCTTTCCTGCAAAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||