These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11655#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 925 fasta sequence [AAACAAACTCCCACCGTGTTCTTCCTCCTCCCAGATCTAAGATCCGTGGACCGACCGAGCTCGAGCTCCACCACCTCGTCTCCAATGGCGGTCAAGGTCTACGTCGTGTATTACTCTATGTATGGTCATGTCGCCAAACTAGCTGAGGAGATCAAGAAAGGTGCTTCATCTGTCGAAGGCGTGGAAGTTAAAATATGGCAGGTCCCTGAAACCCTCTCAGAGGAGGTGCTGGGCAAGATGGGCGCGCCGCCGAGGAGCGACGCGCCGGTGATCGCGCCGCAGGAGCTCGCGGAGGCCGACGGCGTCCTGTTCGGGTTCCCGACGAGGTTCGGCATGATGGCGGCGCAGATGAAGGCGTTCTTCGACGCCACCGGCGGCCTGTGGCGCGAGCAGAGCCTCGCCGGC-AAGCCCGCGGG-CGTC-TTCTTCAGCACCGGCACCCAGGGCGGCGGCCAGGAGACGACGCCGCTCACGGCGGTGACGCAGCTGGCGCACCA-CGGCATGGTGTTCGTCCCGGTC-GGCTACACGTTCGGCGCCAAGATGTTCGACATGGCGGCGGTGCACGGCGGCAGCCCGTACGGCGCCGGCACGTTCGCCGGCGACGGGTCGAGGTGGCCGTCGGAGGCGGAGCTGGAGCACGCCTTCCACCAGGGCAAGTACTTCGCTGGCATCGCCAAGAAGCTCAAGGGCGCCTCCTCCGCCTGAATCATATACAGAATTGTTACAGAGATCATTCGCATTGGCTGCCTGTGCTGATTTGATCCGTGTTCATATGCCGGAATTAATCTTTACCGATTCGTTACACAAAGATTTGGTTGGATTTGGTTGTGGGTTTGATTCTACGTACTGTGCTTGTATAAACTTGTTAAGTTGATTGTGCACTCCCATCGATATTATACCATCATATAATCTATATTCAAAAAAAAAA] [+] EMBL AK059889 [AAACAAACTCCCACCGTGTTCTTCCTCCTCCCAGATCTAAGATCCGTGGACCGACCGAGCTCGAGCTCCACCACCTCGTCTCCAATGGCGGTCAAGGTCTACGTCGTGTATTACTCTATGTATGGTCATGTCGCCAAACTAGCTGAGGAGATCAAGAAAGGTGCTTCATCTGTCGAAGGCGTGGAAGTTAAAATATGGCAGGTCCCTGAAACCCTCTCAGAGGAGGTGCTGGGCAAGATGGGCGCGCCGCCGAGGAGCGACGCGCCGGTGATCGCGCCGCAGGAGCTCGCGGAGGCCGACGGCGTCCTGTTCGGGTTCCCGACGAGGTTCGGCATGATGGCGGCGCAGATGAAGGCGTTCTTCGACGCCACCGGCGGCCTGTGGCGCGAGCAGAGCCTCGCCGGC AAGCCCGCGGG CGTC TTCTTCAGCACCGGCACCCAGGGCGGCGGCCAGGAGACGACGCCGCTCACGGCGGTGACGCAGCTGGCGCACCA CGGCATGGTGTTCGTCCCGGTC GGCTACACGTTCGGCGCCAAGATGTTCGACATGGCGGCGGTGCACGGCGGCAGCCCGTACGGCGCCGGCACGTTCGCCGGCGACGGGTCGAGGTGGCCGTCGGAGGCGGAGCTGGAGCACGCCTTCCACCAGGGCAAGTACTTCGCTGGCATCGCCAAGAAGCTCAAGGGCGCCTCCTCCGCCTGAATCATATACAGAATTGTTACAGAGATCATTCGCATTGGCTGCCTGTGCTGATTTGATCCGTGTTCATATGCCGGAATTAATCTTTACCGATTCGTTACACAAAGATTTGGTTGGATTTGGTTGTGGGTTTGATTCTACGTACTGTGCTTGTATAAACTTGTTAAGTTGATTGTGCACTCCCATCGATATTATACCAT ] [+] EMBL AU183981 [ AACTCCCACCGTGTTCTTCCTCCTCCCAGATCTAAGATCCGTGGACCGACCGAGCTCGAGCTCCACCACCTCGTCTCCAATGGCGGTCAAGGTCTACGTCGTGTATTACTCTATGTATGGTCATGTCGCCAAACTAGCTGAGGAGATCAAGAAAGGTGCTTCATCTGTCGAAGGCGTGGAAGTTAAAATATGGCAGGTCCCTGAAACCCTCTCAGAGGAGGTGCTGGGCAAGATGGGCGCGCCGCCGAGGAGCGACGCGCCGGTGATCGCGCCGCAGGAGCTCGCGGAGGCCGACGGCGTCCTGTTCGGGTTCCCGACGAGGTTCGGCATGATGGCGGCGCAGATGAAGGCGTTCTTCGACGCCACCGGCGGNCTGTGGCGCGAGCAGAGCCTCGCCGGCAAAGCCCGGGGGCCGTCTTTCTT ] [+] EMBL AU065458 [ CCCAGATCTAAGATCCGTGGACCGACCGAGCTCGAGCTCCACCACCTCGTCTCCAATGGCGGTCAAGGTCTACGTCGTGTATTACTCTATGTATGGTCATGTCGCCAAACTAGCTGAGGAGATCAAGAAAGGTGCTTCATCTGTCGAAGGCGTGGAAGTTAAAATATGGCAGGTCCCTGAAACCCTCTCAGAGGAGGTGCTGGGCAAGATGGGCGCGCCGCCGAGGAGCTACGCGCCGGTGATCGCNCCGNAAGAGCTCGCGGAAGCCGACNGCGTCCTGTTCGGGTT CCGACGAAGTTCGGCAT ] [+] EMBL AU162525 [ CCCAGATCTAAGATCCGTGGACCGACCGAGCTCGAGCTCCACCACCTCGTCTCCAATGGCGGTCAAGGTCTACGTCGTGTATTACTCTATGTATGGTCATGTCGCCAAACTAGCTGAGGAGATCAAGAAAGGTGCTTCATCTGTCGAAGGCGTGGAAGTTAAAATATGGCAGGTCCCTGAAACCCTCTCAGAGGAGGTGCTGGGCAAGATGGGCGCNCCG ] [+] EMBL BE040808 [ CGGCCTGTGGCGCGAGCAGAGCCTCGCCGGC AAACCCGCGGG CGTC TTCTTCAGCACCGGCACCCAGGGCGGCGGCCAGGAGACGACGCCGCTCACGGCGGTGACGCAGCTGATGCACCA CGGCATGGTGTTCGTCCCGGTC GGCTACACGTTCGGCGCCAAGATGTTCGACATGGCGGCGGTGCACGGCGGCAGCCCGTACGGCGCCGGCACGTTCGCCGGCGACGGGTCGAGGTGGCCGTCGGAGGCGGAGCTGGAGCACGCCTTCCACCAGGGCAAGTACTTCGCTGGCATCGCCAAGAAGCTCAAGGGCGCCTCCTCCGCCTGAATCATATACAGAATTGTTACAGAGATCATTCGCATTGGCTGCCTGTGCTGATTTGATCCGTGTTCATATGCCGGAATTAATCTTTACCGATTCGTTACACAAAGATTTGGTTGGATTTGGTTGTGGGTTTGATTCTACGTACTGTGCTTGTATAAACTTGTTAAGTTGATTGTGCACTCCCATCGATTTTATACCATCATATAATCTATATTCAAAAAAAAAA] [+] EMBL BI795300 [ GGCGGTGACGCAGCTGGCGCACCACCGGCATGGTGTTCGTCCCGGTC GGCTACACGTTCGGCGCCAAGATGTTCGACATGGCGGCGGTGCACGGCGGCAGCCCGTACGGCGCCGGCACGTTCGCCGGCGACGGGTCGAGGTGGCCGTCGGA GCGGAGCTGGAGCACGCCTTCCACCAGGGCAAGTACTTCGCTGGCATCGCCAAGAAGCTCAAGGGCGCCTCCTCCGCCTGAATCATATACAGAATTGTTACAGAGATCATTCGCATTGGCTGCCTGTGCTGATTTGATCCGTGTTCATATGCCGGAATTAATCTTTACCGATTCGTTACACAAAGATTTGGTTGGATTTGGTTGTGGGTTTGATTCTACGTACTGTGCTTGTATAAACTTGTTAAGTTGATTGTGCACTCCCATCGATATTATACCATCATATAATCTATATTCCAAAAA ] [+] EMBL AU183982 [ GCGCACCA CGGCATGGTGTTCGTCCCGGTCGGGCTACACGTTCGGCGCCAAGATGTTCGACATGGCGGCGGTGCACGGCGGCAGCCCGTACGGCGCCGGCACGTTCGCCGGCGACGGGTCGAGGTGGCCGTCGGAGGCGGAGCTGGAGCACGCCTTCCACCAGGGCAAGTACTTCGCTGGCATCGCCAAGAAGCTCAAGGGCGCCTCCTCCGCCTGAATCATATACAGAATTGTTACAGAGATCATTCGCATTGGCTGCCTGTGCTGATTTGATCCGTGTTCATATGCCGGAATTAATCTTTACCGATTCGTTACACAAAGATTTGGTTGGATTTGGTTGTGGGTTTGATTCTACGTACTGTGCTTGTATAAACTTGTTAAGTTGATTGTGCACTCCCATCGATATTATACCATCATATAATCTATA AAAAA ] [+] EMBL CF195930 [ CGGCGGCAGCCCGTACGGCGCCGGCACGTTCGCCGGCGACGGGTCGAGGTGGCCGTCGGAGGCGGAGCTGGAGCACGCCTTCCACCAGGGCAAGTACTTNNNTGGCATCGCCAAGAAGCTCAAGGGCGCCTCCTCCGCCTGAATCAT ] [+] EMBL AU032243 [ GAGGTGGCCGTCGGAGNCGGAGCTGGAGCACGCCTTCCACCAGGGCAAGTACTTCGCTGGCATCGCCAAGAAGCTCAAGGGCGCCTCCTCCGCCTGAATCATATACAGAATTGTTACAGAGATCATTCGCATTGGCTGCCTGTGCTGATTTGATCCGTGTTCATATGCCGGAATTAATCTTTNCCGATTCGTTACACAAAGATTTGGTTGGATTTGGTTGTGGGTTTGATTCTACGTACTGTGCTTGTATAAACTTGTTAAGTTGATTGTGCACTCCCATCGATATTATACCATCATATAATCTATATTAAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||