|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11657#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2865 fasta sequence
[GCTTCCATTTATTCGAACCAGCTAGGTATGAGATATGGAGCTAAGCAAGAGCAGATGGATGGCATGGACAAGTCAAAAGACACCTTGCAAGCTATGGCACCTGAAAATTCTGTGCTGGATCAACAACAACCTCAGGCCCCACATTTGTCACAGCAAGCAGGCCCACGAAACATGCAACAGTGGCAGAATCCTCGTTTTTCAGGTGAGAAGGACTTGAAGAAAGAAGAAATGCTTCAGAGAAGGAAGATAGCTGCTACTTCTCGTGTCTCTTCTGTACCAATGGTTCAGTCTCCAGTCTCCTCAAAATCTGGGGAGATATCAAGCAGTTCAATGAGTGCCCAGTTTGGCGCTGCTGTGACATCTGCTGTAATGGGATCACAGAAAGACAAGTTCCCTGCAAATTCCAATCCTGCAGTAGTGGGCTATCCCCCTGTTGCTTCTAGCCCTAGTGATTCAATGCACCGGATGCAGCAGCCTTCAGTTGCTCCTTCAAAGAGAAAATCAAATTCTGTTCCCAAAACTCAACCGCCTGTGAGTGGTGTAGGGTCTCCAGCCAGTGTTTCAAACATGCATGCTGTACTGAATGCTAGCAGCCCATCAATTGGGACTGCACCTATGGGTGATCAAGCAATCCTTGAGAGATTTGTCAAAATTGATGCCATATCTCAAAGGTGCAAGCTGCACAGCAAGAAGAACAAAGTTGACAATATACCTCAGAGAAAACCGATTATCAATGCAAGCCAAGAGAAAGTTGCTACAGTTCTCTCCAATTGCTTTCATGCTGAAGATTTTAGAGATGAAATAAAACCTCTTTGTAACTCTATGTTGGGTGGAACAATGAATTCCTTTAAGACTAGAATACTAAACTTTGTGGTCAACAACCGCATGTACCAAGGCCCTACAAAGCCATTCCGTATCATTTTCAAGGAGAAGCATGATGGAACAGTGGCGATGCAATATGGAGATCCAGAAGATTTTG-ACAATCAGAACTCATATGAGTGTACACTGATATTGCCCACCAAGTACCACGCTGATCTGCTTGCGAAGCAACTTATTATCCGGATGGACCGAGAAGGCCATACCAAGGCAGACGATCAAGTTGCGCTTAGCACCCCTCCTGGTAACCTCAGTGCATTATCAGGAATTTTACCAGACAACACGGTAAATGATGTGAAACAAGAAGGTGGTATTAGCCATCAGCTAAATGCTGCAGCTCATGCAAATATGACACCTGGAACCCCTTTACAACAACACCCTGCCAATAGGATGCTTCCATCTGTGAATAACCAAGCGTTAATGCAGCAAGGATACATGCAGGGGGCAAACATGCCTCCGAGGAGTCAACAGCTTGACCAGAATTTGATTCAGCAGCAGCAACAGCAGCCGCCGCAGCTGCAGCAAAATGCACAAGCACAACTGCAGCAACCAGCATCTCTTCCTCTCAACCAGATGCAGAGACCTCAACTTCTACCAACGAACCCATTATCTCAGATGCTGGGGAATACTGGCTCCAATCTTCCGATGGCCTCAAGCCACATGGGTAACAAGGTCGCTCCTAATTCTGTGCAGCTTCAGATGATGCAGCAGCAGCAACAGTCGAGGAAAATGATGATGGGCCTCGGCTCGCCTGCCAACATGGGTAATATGGTTAACAATGTTGTTGGCCTCAACAATATTGGAAATGTTATGGGAATGGGCAATGTGCGGCCAATGTCGTCCCCAATGGGAAACATGTCAGGCTTAGGGAACAACCCCAATCAGATGAGCCTTGGAATGGTATCCAGTCTCTCTGCACCTGGGATTCGTCCAGGTATGACACATGCTGCTATTGCCAAGATGCGAATGGGGTTGATACAGCAGCAAAGAGCAGCAGGCATTTACCCCCAGACTAGCATGGTCGGAATGCCTGGGAGCAGTTCTCCGATTCTTCCTGGTTCTGCCAATTTGTCCATGATGAATCAGCTAAACAGAAGCAACATTAACCCTTTGCAGCGGGCCATGATGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATCCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTGGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT-AACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA-CCCAT-GGGTCGGTCAACAGCATCGCAAACTCCCCAAT-GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA-GGGAGCATGTAGTGACGGCAAATAATT-GTTTCTGTGATGGACATACAAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG-CCAATAGATGAAGATATTATGGAGGATCAGCCTTACG-CA-GGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTCTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTAACCGTGGTGCTTATTAATAAGTATCTTCATTTGATTGTGGAAAAAAAAA]
[+] EMBL CB631613 [GCTTCCATTTATTCGAACCAGCTAGGTATGAGATATGGAGCTAAGCAAGAGCAGATGGATGGCATGGACAAGTCAAAAGACACCTTGCAAGCTATGGCACCTGAAAATTCTGTGCTGGATCAACAACAACCTCAGGCCCCACATTTGTCACAGCAAGCAGGCCCACGAAACATGCAACAGTGGCAGAATCCTCGTTTTTCAGGTGAGAAGGACTTGAAGAAAGAAGAAATGCTTCAGAGAAGGAAGATAGCTGCTACTTCTCGTGTCTCTTCTGTACCAATGGTTCAGTCTCCAGTCTCCTCAAAATCTGGGGAGATATCAAGCAGTTCAATGAGTGCCCAGTTTGGCGCTGCTGTGACATCTGCTGTAATGGGATCACAGAAAGACAAGTTCCCTGCAAATTCCAATCCTGCAGTAGTGGGCTATCCCCCTGTTGCTTCTAGCCCTAGTGATTCAATGCACCGGATGCAGCAGCCTTCAGTTGCTCCTTCAAAGAGAAAATCAAATTCTGTTCCCAAAACTCAACCGCCTGTGAGTGGTGTAGGGTCTCCAGCCAGTGTTTCAAACATGCATGCTGTACTGAATGCTAGCAGCCCATCAATTGGGACTGCACCTATGGGTGATCAAGCAATCCTTGAGAGATTTGTCAAAATTGATGCCATATCTCAAAGGTGCAAGCTGCACAGCAAGAAGAACAAAGTTGACAATATACCTCAGAGAAAACCGATTATCAATGCAAGCCAAGAGAAAGTTGCTACAGTTCTCTCCAATTG ]
[+] EMBL CB631741 [ AAGACAAGTTCCCTGCAAATTCCAATCCTGCAGTAGTGGGCTATCCCCCTGTTGCTTCTAGCCCTAGTGATTCAATGCACCGGATGCAGCAGCCTTCAGTTGCTCCTTCAAAGAGAAAATCAAATTCTGTTCCCAAAACTCAACCGCCTGTGAGTGGTGTAGGGTCTCCAGCCAGTGTTTCAAACATGCATGCTGTACTGAATGCTAGCAGCCCATCAATTGGGACTGCACCTATGGGTGATCAAGCAATCCTTGAGAGATTTGTCAAAATTGATGCCATATCTCAAAGGTGCAAGCTGCACAGCAAGAAGAACAAAGTTGACAATATACCTCAGAGAAAACCGATTATCAATGCAAGCCAAGAGAAAGTTGCTACAGTTCTCTCCAATTGCTTTCATGCTGAAGATTTTAGAGATGAAATAAAACCTCTTTGTAACTCTATGTTGGGTGGAACAATGAATTCCTTTAAGACTAGAATACTAAACTTTGTGGTCAACAACCGCATGTACCAAGGCCCTACAAAGCCATTCCGTATCATTTTCAAGGAGAAGCATGATGGAACAGTGGCGATGCAATATGGAGATCCAGAAGATTTTG ACAATCAGAACTCATATGAGTGTACACTGATATTGCCCACCAAGTACCACGCTGATCTGCTTGCGAAGCAACTTATTATCCGGATGGACCGAGAAGGCCATACCAAGGCAGACGATCAAGTTGCGCTTAGCACCCCTCCTGGTAACCTCAGTGCATTATCAGGAATTTTACCAGAACACACGGTAAATGATGTGAAACAAGAAGGTGGTATTAGCCATCAGC ]
[+] EMBL AK063378 [ AGAAGATTTTG ACAATCAGAACTCATATGAGTGTACACTGATATTGCCCACCAAGTACCACGCTGATCTGCTTGCGAAGCAACTTATTATCCGGATGGACCGAGAAGGCCATACCAAGGCAGACGATCAAGTTGCGCTTAGCACCCCTCCTGGTAACCTCAGTGCATTATCAGGAATTTTACCAGACAACACGGTAAATGATGTGAAACAAGAAGGTGGTATTAGCCATCAGCTAAATGCTGCAGCTCATGCAAATATGACACCTGGAACCCCTTTACAACAACACCCTGCCAATAGGATGCTTCCATCTGTGAATAACCAAGCGTTAATGCAGCAAGGATACATGCAGGGGGCAAACATGCCTCCGAGGAGTCAACAGCTTGACCAGAATTTGATTCAGCAGCAGCAACAGCAGCCGCCGCAGCTGCAGCAAAATGCACAAGCACAACTGCAGCAACCAGCATCTCTTCCTCTCAACCAGATGCAGAGACCTCAACTTCTACCAACGAACCCATTATCTCAGATGCTGGGGAATACTGGCTCCAATCTTCCGATGGCCTCAAGCCACATGGGTAACAAGGTCGCTCCTAATTCTGTGCAGCTTCAGATGATGCAGCAGCAGCAACAGTCGAGGAAAATGATGATGGGCCTCGGCTCGCCTGCCAACATGGGTAATATGGTTAACAATGTTGTTGGCCTCAACAATATTGGAAATGTTATGGGAATGGGCAATGTGCGGCCAATGTCGTCCCCAATGGGAAACATGTCAGGCTTAGGGAACAACCCCAATCAGATGAGCCTTGGAATGGTATCCAGTCTCTCTGCACCTGGGATTCGTCCAGGTATGACACATGCTGCTATTGCCAAGATGCGAATGGGGTTGATACAGCAGCAAAGAGCAGCAGGCATTTACCCCCAGACTAGCATGGTCGGAATGCCTGGGAGCAGTTCTCCGATTCTTCCTGGTTCTGCCAATTTGTCCATGATGAATCAGCTAAACAGAAGCAACATTAACCCTTTGCAGCGGGCCATGATGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATC CAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTAGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT AACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATT GTTTCTGTGATGGACATACAAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG CCAATAGATGAAGATATTATGGAGGATCAGCCTTACG CA GGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTCTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTAACCGTGGTGCTTATTAATAAGTATCTTCAT ]
[+] EMBL CB668308 [ ATTTTGCACTATCAGAACTCATATGAGTGTACACTGATATTGCCCACCAAGTACCACGCTGATCTGCTTGCGAAGCAACTTATTATCCGGATGGACCGAGAAGGCCATACCAAGGCAGACGATCAAGTTGCGCTTAGCACCCCTCCTGGTAACCTCAGTGCATTATCAGGAATTTTACCAGACAACACGGTAAATGATGTGAAACAAGAAGGTGGTATTAGCCATCAGCTAAATGCTGCAGCTCATGCAAATATGACACCTGGAACCCCTTTACAACAACACCCTGCCAATAGGATGCTTCCATCTGTGAATAACCAAGCGTTAATGCAGCAAGGATACATGCAGGGGGCAAACATGCCTCCGAGGAGTCAACAGCTTGACCAGAATTTGATTCAGCAGCAGCAACAGCAGCCGCCGCAGCTGCAGCAAAATGCACAAGCACAACTGCAGCAACCAGCATCTCTTCCTCTCAACCAGATGCAGAGACCTCAACTTCTACCAACGAACCCATTATCTCAGATGCTGGGGAATACTGGCTCCAATCTTCCGATGGCCTCAAGCCACATGGGTAACAAGGTCGCTCCTAATTCTGTGCAGCTTCAGATGATGCAGCAGCAGCAACAGTCGAGGAAAATGATGATGGGCCTCGGCTCGCCTGCCAACATGGGTAATATGGTTAACAATGTTGTTGGCCTCAACAATATTGGAAATGTTATGGGAATGGGCAATGTGCGGCCAATGTCGTCCCCAATGGGAAACATGTCAGGCTTANGGAACAACCCCCATCAGAT ]
[+] EMBL CA764107 [ TACAGCAGCAAAGAGCAGCAGGCATTTACCCCCAGACTAGCATGGTCGGAATGCCTGGGAGCAGTTCTCCGATTCTTCCTGGTTCTGCCAATTTGTCCATGATGAATCAGCTAAACAGAAGCAACATTAACCCTTTGCAGCGGGCCATGATGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATCCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTGGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT AACAATGTTATCAACCACGTAGCCACACCAGGCCCTNCTNCTAGCCCGCAGCTCAGCTCACAGACCCCATGGGGTCGGTCAACAGCATCGCAAACTCCCCAATGGGAGCAGNTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATTGGTTTTTGNGATGGACATACAAAATAATGCAAGGTATNAATATCGGCAGNGATCAGCACNTTTTTTTATTTGGTG GGGAAATGATGGTTAAGGTAGGNGTCCTGNAAGTTNTAGNCCAt ]
[-] EMBL CB631614 [ ATGATGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATCCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTGGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT AACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATT GTTTCTGTGATGGACATACAAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG CCAATAGATGAAGATATTATGGAGGATCAGCCTTACG CA GGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTCTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTACCCGTAGGGCTTATTAATAAGTATCTTCATTTGATTGTGGA ]
[-] EMBL CB668309 [ TGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATCCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTGGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT AACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATT GTTTCTGTGATGGACATACAAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG CCAATAGATGAAGATATTATGGAGGATCAGCCTTACG CA GGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGAGGGCTTTCTTGTTTAAATTAATTATCAAGTTTG GTAAaaaaagga ]
[-] EMBL CB631742 [ CTGCTGGTTTGCAGCAGTCATTGGTGATGTCGCAGCCTCAGCAAATAAGCCCCCCGCAAATGGCCGCGATGAGTCCCCAGCTGAGCTCAGGCCCCCTGCAGCAAGTGAAT AACAATGTTATTAACCACGTAGCCACCCCAGGCCCTCCTCCTAGCCCGCAGGTCAGTTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATT GTTTTTGTGATGGGCATACAAAATAATGCAAGGTATAAATATCGGCAGGGATCAGCCCTTTTTTTTTTTTGTTGTGGTAAATGAAGTTAAAGTTAGGTGTCCTGTAAGTTATAG CCAATAGATGAAGATATTATGGAGGATCACCCCTCCC CA GGGATTTTTGATGTTGTAGATTTTAGATAAAGAAATTAGTCCCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTTTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTAACCGTGGGGCTTATTAATAAGTATTTTCGTTT ]
[+] EMBL BI805233 [ GTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAATGAACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCACGGGAGCATGTAGTGACGGCAAATAATT GTTTCTGTGATGGACATACCAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG CC ATAGATGAAGATATTATGGAGGATCAGCCTTACGCCACGGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTCTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTAACCGTGGTGCTTATTAATAAGTATCTTCATTTGATTGTGAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||