These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11664#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1173 fasta sequence [CATCACTGGCTCACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATTCGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTACGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCTGACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCCGAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG-TA-CAT-CAGAGACAGGCT-CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA-CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAAATTTAAAAAAAAAAAAAAA] [+] EMBL AK106319 [CATCACTGGCTCACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATTCGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTACGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCTGACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCCGAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG TA CAT CAGAGACAGGCT CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCA ] [+] EMBL AU068090 [ ACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGC ] [+] EMBL D55710 [ AACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATTCGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTACGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCTGACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCCGAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG TA CAT CAGAGACAGGCT CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTGTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAG ] [+] EMBL OSC101501 [ AACGCCATCTCGATNGAAAGCTAGACTAACCAAGTATATATACGATCGATGGNGTTCCGGAGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGANCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTNTTCGGCCACGGCCGCTAATCCCTCGACCTCTTCGGTCACGACCTNCGCCGCGTCGGCAAC ] [+] EMBL D43137 [ TCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTAGGCCACGGCCGCTACTCCCTCGACCTCTCCG ] [+] EMBL AU068091 [ CCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG TA CAT CAGAGACAGGCT CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAA ] [+] EMBL AU082589 [ tcATGTTACCATCCAGAGACAGGCTCCAACTACNGTGGCAAGATGATCTGGAACNGGTACTACGACAAGAAGACCGACTACTCCATTNGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGANCNTNNNNNNATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATNTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAATCTTTAAAAAAAAAAAAAAA] [+] EMBL CF329505 [ CAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAG ATATATATATATATATATATATACCAAGTATTGAATAAGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAAA ] [-] EMBL CF329504 [ AAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAACCCTATATATATACTCCTTTTTCCATTGGGAGCATGGAG ATATATATATATATATATATATACCAAGTATTGAATAAGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAAAa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||