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Oryza sativa
cluster # 11664 cluster # 11664       Sequences # 9       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11664#0 length = 1173 sequences # 9  

consensusID : consensus_11664#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1173
fasta sequence
                              [CATCACTGGCTCACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATTCGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTACGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCTGACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCCGAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG-TA-CAT-CAGAGACAGGCT-CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA-CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAAATTTAAAAAAAAAAAAAAA]

[+] EMBL AK106319             [CATCACTGGCTCACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATTCGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTACGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCTGACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCCGAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG TA CAT CAGAGACAGGCT CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCA                                                                                                                    ]
[+] EMBL AU068090             [            ACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL D55710               [                      AACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATATATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGACCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCTCTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGTCGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATTCGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTACGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCTGACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGGGGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCCGAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG TA CAT CAGAGACAGGCT CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTGTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAG                         ]
[+] EMBL OSC101501            [                      AACGCCATCTCGATNGAAAGCTAGACTAACCAAGTATATATACGATCGATGGNGTTCCGGAGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGANCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTNTTCGGCCACGGCCGCTAATCCCTCGACCTCTTCGGTCACGACCTNCGCCGCGTCGGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL D43137               [                                                                                        TCATGCATCCCGGCGGCTCTGGCCGTCTTCTTCCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCGCCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCATCATCTCCTTCCTCAGCGTCTTAGGCCACGGCCGCTACTCCCTCGACCTCTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU068091             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCAGGTGTACCTCGGGCTGGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCTGGTGATG TA CAT CAGAGACAGGCT CAACTACGGTGGCAAGATGATCTGGGACAGGTACTACGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAA                   ]
[+] EMBL AU082589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          tcATGTTACCATCCAGAGACAGGCTCCAACTACNGTGGCAAGATGATCTGGAACNGGTACTACGACAAGAAGACCGACTACTCCATTNGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGANCNTNNNNNNATATATATATATATATATATATACCAAGTATTGAATAGGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATNTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAATCTTTAAAAAAAAAAAAAAA]
[+] EMBL CF329505             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAA CCTATATATATACTCCTTTTTCCATTGGGAGCATGGAG  ATATATATATATATATATATATACCAAGTATTGAATAAGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAAA                  ]
[-] EMBL CF329504             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAACCCTATATATATACTCCTTTTTCCATTGGGAGCATGGAG  ATATATATATATATATATATATACCAAGTATTGAATAAGGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGATTATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCATGTGAAAGTAAAAAAa                 ]


>consensus_11664#0 CATCACTGGCTCACCGCAATTAAACGCCATCTCGATCGAAAGCTAGACTAACCAAGTATA TATACGATCGATGGCGTTCCGGCGCCGTTCATGCATCCCGGCGGCTCTGGCCGTCTTCTT CCTGCTGCTCGCCGGCCAGTCAACCGCCGGCGAAGACCAGACCGCCGTAATCTGGGGCCG CCACGGCGACGAGGGCACCCTCCGTGAGGCCTGCGACACCGGCCACTACAACACCGTCAT CATCTCCTTCCTCAGCGTCTTCGGCCACGGCCGCTACTCCCTCGACCTCTCCGGCCACGA CCTCCGCCGCGTCGGCAACGACATCAAGCACTGCCAGCGCAAGGGCATCGTCGTGCTCCT CTCCATCGGCGGCCAGGGCGGCGACTATTCCCTCCCCTCCTCCCGCTCCGCCGCCGACGT CGCCGACAACCTCTGGAACGCGTTCCTCGCCGGCCGCCGCAAGGGCGTGCTCCGGCCATT CGGCAACGCGGCGGTCGACGGCATCGACTTCTTCATCGACCGGGGCTCCGGCGACCACTA CGACGAGCTGGCCAGGAAGCTCTACAGCTACAGAAACAACAAGGGGAAGGGGGTGATGCT GACGGCGACGCCGCGGTGCAGGTTCCCGGACCGGCGGCTGGAGAAGGCGCTGGCGACGGG GGTGTTCGCGCGCATCCACGTGAGGATGTTCGGCGACGACGTGAACTGCACGGCGGCGCC GAGGGAGTCGTGGGAGAAGTGGGCGGCGGCGTACCCGGCGAGCCAGGTGTACCTCGGGCT GGTGGCCTCGTCGGAGCAGGACCCGGGATACCTGTCGCCCAAGCCACTCTACTACACGCT GGTGATGTACATCAGAGACAGGCTCAACTACGGTGGCAAGATGATCTGGGACAGGTACTA CGACAAGAAGACCGACTACTCCATTGGAAAACTTATTTAAAACCTATATATATACTCCTT TTTCCATTGGGAGCATGGAGATATATATATATATATATATATATACCAAGTATTGAATAG GGCTTAATTTCTAGCTATATGGAATAATGTAATCCCATGTCGCAATTAAATAAGGGTGAT TATCTAAATTGTTGTTGTTTTTTGTAATCCTCCAAAATAATATCAATAAAGTTCACTGCA TGTGAAAGTAAAAAATTTAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)