These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11669#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2215 fasta sequence [CGCTTGCCGGTGGACTGGAGTGGAGTGGCGGTGGCGGTGGCGCACACTCGCGGCGGCTCGTGCGCCCCTCCGCCTATCGCCGCCGGCGGCCGGCCACCCACCCTCGAACGCCGCGGTGACGCCGGTGAGTTCTCGCTGCCCTATCCCCTAAACCAGATTTTCCGAGCGGTGCCATGAGAGTCCGTCGAGTTCGCCTGAGCCATTCAACTCCGCCGTGAGGGTGGGGGTCTCCGACGTGCCCGTCGGCGCGATTCCGGGAAGCCGCCGCCGCCGTCGTCCTGCCACTGGGGCTGCCTCAATCAGGTGCTCTGTTTGCAGCGCCATCCACGAGACGGGTTTATCCCATTAGCCCACTACCTTTCCCTACATTTCTCTCTTCTTCGCCGCAGCTCGATTTGCACAAGTTCGGTTTCATGATTTTTCTTTCAACACCAAAGCGAATAGCATTACATCAGAATCTGTGCATGTTCATGCGCAGTTTCATTCTTTGGACGATGAATCACCGTACATTGAAAGTATATTTAAGTTTATAACTGGGAATTGTTGTTTGAAACTGAATAGGGATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAAGATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTGGTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAACTACTTTTGAGAAGATGGGCCGCACATCACAGGTTTGTGTCTAAATTCTGATCAGCTTCTTTCTTATTTTCACTACTTTTCGGATTTTTGTGGTCCCAATTTAGGCTTGTGGATGCATTTCTGAACATATTTCAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGCAAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAACTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTCCATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTGTTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTTGATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCCTGTCCCCTACAATTCTGAATGTGATCTGGAGATGTGAAATCGCGCGGAGCAGTCCTTATGAGGTCAACATTTTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGCTTCATTGTGTTGTCAAGTCTACTTTGTTGTGGAGGTTTCATCTACAAAACACGTGTCCAACATCAGTCTGGTTTATATGCGCTGCCTGGGATGACCATCTTGTCTGCCTTCCTAGATGCGGTTGGTGGACCAAGCTACATGAGAGCAGATGATCATGGCGGAAACCATGCAAGCCAAGCATCATGGGAACGCATGCCTGGTACCTCACAAGCAGCAGAGCATGGCACCAAAGATAGGAGATACGGATCACTTTGAACTGAACGATGCTTTAGTTTTTGAGGGTTGCTTTTTTGTAAGTTTGAAGTATTCTGTAATCAGACAAACTCTGCACTTCATCTGCAGTTGAGCTTCCGAAGCATTGCTTATCATCTTTTCAGCTTAGATGGTGTTATGAATTGTGGTGGTGGATCATTCAGCATGCCACCATCGTCATCGCCATCCGATCGACGTGCATGCTCATTAGCAGATACTAGACCTCTGTTCTTAGATAGTGCTCCCTCCAGTTTTTAATGCTCAACATTATTGACTTTGGACATATGTTTAATGATTTATCTTATTAAAAAACTTATGTAATTATAATTTATTTTGTTATTTGTTTTATTATTAAAGAAAAAAAA] [+] EMBL AK100901 [CGCTTGCCGGTGGACTGGAGTGGAGTGGCGGTGGCGGTGGCGCACACTCGCGGCGGCTCGTGCGCCCCTCCGCCTATCGCCGCCGGCGGCCGGCCACCCACCCTCGAACGCCGCGGTGACGCCGGTGAGTTCTCGCTGCCCTATCCCCTAAACCAGATTTTCCGAGCGGTGCCATGAGAGTCCGTCGAGTTCGCCTGAGCCATTCAACTCCGCCGTGAGGGTGGGGGTCTCCGACGTGCCCGTCGGCGCGATTCCGGGAAGCCGCCGCCGCCGTCGTCCTGCCACTGGGGCTGCCTCAATCAGGTGCTCTGTTTGCAGCGCCATCCACGAGACGGGTTTATCCCATTAGCCCACTACCTTTCCCTACATTTCTCTCTTCTTCGCCGCAGCTCGATTTGCACAAGTTCGGTTTCATGATTTTTCTTTCAACACCAAAGCGAATAGCATTACATCAGAATCTGTGCATGTTCATGCGCAGTTTCATTCTTTGGACGATGAATCACCGTACATTGAAAGTATATTTAAGTTTATAACTGGGAATTGTTGTTTGAAACTGAATAGGGATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAAGATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTGGTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAACTACTTTTGAGAAGATGGGCCGCACATCACAGGTTTGTGTCTAAATTCTGATCAGCTTCTTTCTTATTTTCACTACTTTTCGGATTTTTGTGGTCCCAATTTAGGCTTGTGGATGCATTTCTGAACATATTTCAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGCAAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAACTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTCCATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTGTTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTTGATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCCTGTCCCCTACAATTCTGAATGTGATCTGGAGATGTGAAATCGCGCGGAGCAGTCCTTATGAGGTCAACATTTTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGCTTCATTGTGTTGTCAAGTCTACTTTGTTGTGGAGGTTTCATCTACAAAACACGTGTCCAACATCAGTCTGGTTTATATGCGCTGCCTGGGATGACCATCTTGTCTGCCTTCCTAGATGCGGTTGGTGGACCAAGCTACATGAGAGCAGATGATCATGGCGGAAACCATGCAAGCCAAGCATCATGGGAACGCATGCCTGGTACCTCACAAGCAGCAGAGCATGGCACCAAAGATAGGAGATACGGATCACTTTGAACTGAACGATGCTTTAGTTTTTGAGGGTTGCTTTTTTGTAAGTTTGAAGTATTCTGTAATCAGACAAACTCTGCACTTCATCTGCAGTTGAGCTTCCGAAGCATTGCTTATCATCTTTTCAGCTTAGATGGTGTTATGAATTGTGGTGGTGGATCATTCAGCATGCCACCATCGTCATCGCCATCCGATCGACGTGCATGCTCATTAGCAGATACTAGACCTCTGTTCTTAGATAGTGCTCCCTCCAGTTTTTAATGCTCAACATTATTGACTTTGGACATATGTTTAATGATTTATCTTATTAAAAAACTTATGTAATTATAATTTATTTTGTTATTTGTTTTATTATTAAAGAAAA ] [+] EMBL AU077769 [ GAAGTATNCTGTAATCAGACAAACTCTGCACTTCATCTGCAGTTGNGCTTCCGAAGCATTGCTTATCATCTTTTCAGCTTAGATGGTGTTATGAATTGTGGTGGTGGATCATTCAGCATGCCACCATCGTCATCGCCATCCGATCGACGTGCATGCTCATTAGCAGATACTAGACCTCTGTTCTTAGATAGTGCTCCCTCCAGTTTTTAATGCTCAACATTATTGACTTTGGACATATGTTTAATGATTTATCTTATTAAAAAACTTATGTAATTATAATTTATTTTGTTATTTGTTTTATTATTAAAGAAAAAAAA] consensusID : consensus_11669#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1754 fasta sequence [TTTATTGATATTTTTATTATTTTCTTTGGTCTATCCGCTTGCCGGTGGACTGGAGTGGAGTGGCGGTGGCGGTGGCGCACACTCGCGGCGGCTCGTGCGCCCCTCCGCCTATCGCCGCCGG-GGCCG-GCCACCCACCCTCGAACGCCGCGGTGACGCCGGGATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAAGATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTGGTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAACTACTTTTGAGAAGATGGGCCGCACATCACAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGCAAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAACTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTCCATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTGTTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTTGATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCC-TGTCCCC--TACAATTCT-GAAT-GTG-ATCTGGAGATGTGAAAT-CGCGCGGAGCAGTCCTTATGAGGTCAACATTTTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGTTCATATACAAGAAAAAGAGAGTAATCCAATGAGAGGCTGGGCAACATTTGGGATTATTTCTTGCATCTTCATTGTGTTGTCAAGTCTACTTTGTTGTGGAGGTTTCATCTACAAAACACGTGTCCAACATCAGTCTGGTTTATATGCGCTGCCTGGGATGACCATCTTGTCTGCCTTCCTAGATGCGGTTGGTGGACCAAGCTACATGAGAGCAGATGATCATGGCGGAAACCATGCAAGCCAAGCATCATGGGAACGCATGCCTGGTACCTCACAAGCAGCAGAGCATGGCACCAAAGATAGGAGATACGGATCACTTTGAACTGAACGATGCTTTAGTTTTTGAGGGTTGCTTTTTTGTAAGTTTGAAGTATTCTGTAATCAGACAAACTCTGCACTTCATCGGCAGTTGAGCTTCCGAAGCATTGCTTATCATCTTTTCAGCTTAGATGGTGTTATGAATTGTGGTGGTGGATCATTCACCATGCCACCATCGTCATCGCCATCCGATCGACGTGCATGCTCATTAGCAGATACTAGACCTCTGTTCTTAGATAGTGCTCCCTCCAGTTTTTAATGCTCAACATTATTGACTTTGGACATATGTTTAATGATTTATCTTATTAAAAAACTTATGTAATTATAATTTATTTTGTTAAAAA] [+] EMBL AU056106 [TTTATTGATATTTTTATTATTTTCTTTGGTCTATCCGCTTGCCGGTGGACTGGAGTGGAGTGGCGGTGGCGGTGGCGCACACTCGCGGCGGCTCGTGCGCCCCTCCGCCTATCGCCGCCGG GGCCG GCCACCCACCCTCGAACGCCGCGGTGACGCCGGGATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGG ] [+] EMBL OS0026A [ CGGTNGCGGTGGCGCACACTCGCGGCGGCTCGTNCTCCCCTCCGCCTATNGCNGCCGG NGCCGTGCCACCCACCCTCGAACGCCGCGGTGACGCCGGGATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTNTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGNNGCCAGCCACNGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGTCTTGTGGACTTTGCAGNTCTAATCGGGAAGAANTTTGAATATA ] [+] EMBL CB654883 [ CACACCCTCGGCGGCTCGTGCGCCCCTCCGCCTATCGCCGCCGGCGGCCG GCCACCCACCCTCGAACGCCGCGGTGACGCCGGGATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAAGATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTGGTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAACTACTTTTGAGAAGATGGGCCGCACATCACAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGCAAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAACTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTCCATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTAT ] [-] EMBL CB665483 [ CGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTGTTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTTGATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCC TGTCCCC TACAATTCT GAAT GTG ATCTGGAGATGTGAAAT CGCGCGGAGCAGTCCTTATGAGGTCAACATTTTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGTTCATATACAAGAAAAAGAGAGTAATCCAATGAGAGGCTGGGCAACATTTGGGATTATTTCTTGCATCTTCATTGTGTTGTCAAGTCTACTTTGTTGTGGAGGTTTCATCTACAAAACACGTGTCCAACATCAGTCTGGTTTATATGCGCTGCCTGGGATGACCATCTTGTCTGCCTTCCTAGATGCGGTTGGTGGACCAAGCTACATGAGAGCAGATGATCATGGCGGAAACCATGCAAGCCAAGCATCATGGGAACGCATGCCTGGTACCTCACAAGCAGCAGAGCATGGCACCAAAGATAGGAGATACGGATCACTTTGAACTGAACGATGCTTTAGTTTTTGAGGGTTGCTTTTTTGTAAGTTTGAAGTATTCTGTAATCAGACAAACTCTGCACTTCATCGGCAGTTGAGCTTCCGAAGCA ] [+] EMBL C97862 [ tTACTACCCTTGTCCCCNTTACAATTCTGGAATGGTGAATCTGGAGATTTGAAATCCCCCCGGAGCAGTCCTTATGAGGTCAACATTTTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGTNCATATACAAGAAAAAGAGAGTAATCCAATGAGAGGCTGGGCAACATTTGGGATTATTTCTTGCATCTTCATTGTGTTGTCAAGTCTACTTTGTTGTGGAGGTTTCATCTACAAAACACGTGTCCAACATCAGTCTGGTTTATATGCGCTGCCTGGGATGACCATCTTGTCTGCCTTCCTAGATGCGGTTGGTGGACCAAGCTACATGAGAGCAGATGATCATGGCGGAAACCATGCAAGCCAAGCATCATGGGAACGCATGCCTGGTACCTCACAAGCAGCAGAGCATGGCACCAAAGATAGGAGATACGGATCACTTTGAACTGAACGATGCTTTAGTTTTTGAGGGTTGCTTTTTTGTAAGTTTGAAGTATTCTGTAATCAGACAAACTCTGCACTTCATCTGCAGTTGAGCTTCCGAAGCATTGCTTATCATCTTTTCAGCTTAGATGGTGTTATGAATTGTGGTGGTGGATCATTCACCATGCCACCATCGTCATCGCCATCCGATCGACGTGCATGCTCATTAGCAGATACTAGACCTCTGTTCTTAGATAGTGCTCCCTCCAGTTTTTAATGCTCAACATTATTGACTTTGGACATATGTTTAATGATTTATCTTATTAAAAAACTTATGTAATTATAATTTATTTTGTTAAAAA] consensusID : consensus_11669#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1641 fasta sequence [TATTTTCTTTGGTCTATCCGCTTGCCGGTGGACTGGAGTGGAGTGGCGGTGGCGGTGGCGCACACTCGCGGCGGCTCGTGCGCCCCTCCGCCTATCGCCGCCGGCGGCCGGCCACCCACCCTCGAACGCCGCGGTGACGCCGGTGAGTTCTCGCTGCCCTATCCCCTAAACCAGATTTTCCGAGCGGTGCCATGAGAGTCCGTCGAGTTCGCCTGAGCCATTCAACTCCGCCGTGAGGGTGGGGGTCTCCGACGTGCCCGTCGGCGCGATTCCGGGAAGCCGCCGCCGCCGTCGTCCTGCCACTGGGGCTGCCTCAATCAGGTGCTCTGTTTGCAGCGCCATCCACGAGACGGGTTTATCCCATTAGCCCACTACCTTTCCCTACATTTCTCTCTTCTTCGCCGCAGCTCGATTTGCACAAGTTCGGTTTCATGATTTTTCTTTCAACACCAAAGCGAATAGCATTACATCAGAATCTGTGCATGTTCATGCGCAGTTTCATTCTTTGGACGATGAATCACCGTACATTGAAAGTATATTTAAGTTTATAACTGGGAATTGTTGTTTGAAACTGAATAGGGATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAAGATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTGGTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAACTACTTTTGAGAAGATGGGCCGCACATCACAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGCAAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAACTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTCCATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTGTTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTTGATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCCTGTCCCCTACAATTCTGAATGTGATCTGGAGATGTGAAATCGCGCGGAGCAGTCCTTATGAGGTCAACATTTTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGGTTGGTTCGACCACATAATTGTCAGTTCTACATAAGTGCATATTGACTTCTAGTCGCATTTAGACACATTTCAATTGAGAAAATTTCGTACGTTAGAAATCCGATGGGTTTAGTTTTCAATAATATGGG] [+] EMBL AK119928 [TATTTTCTTTGGTCTATCCGCTTGCCGGTGGACTGGAGTGGAGTGGCGGTGGCGGTGGCGCACACTCGCGGCGGCTCGTGCGCCCCTCCGCCTATCGCCGCCGGCGGCCGGCCACCCACCCTCGAACGCCGCGGTGACGCCGGTGAGTTCTCGCTGCCCTATCCCCTAAACCAGATTTTCCGAGCGGTGCCATGAGAGTCCGTCGAGTTCGCCTGAGCCATTCAACTCCGCCGTGAGGGTGGGGGTCTCCGACGTGCCCGTCGGCGCGATTCCGGGAAGCCGCCGCCGCCGTCGTCCTGCCACTGGGGCTGCCTCAATCAGGTGCTCTGTTTGCAGCGCCATCCACGAGACGGGTTTATCCCATTAGCCCACTACCTTTCCCTACATTTCTCTCTTCTTCGCCGCAGCTCGATTTGCACAAGTTCGGTTTCATGATTTTTCTTTCAACACCAAAGCGAATAGCATTACATCAGAATCTGTGCATGTTCATGCGCAGTTTCATTCTTTGGACGATGAATCACCGTACATTGAAAGTATATTTAAGTTTATAACTGGGAATTGTTGTTTGAAACTGAATAGGGATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAAGATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTGGTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAACTACTTTTGAGAAGATGGGCCGCACATCACAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGCAAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAACTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTCCATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTGTTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTTGATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCCTGTCCCCTACAATTCTGAATGTGATCTGGAGATGTGAAATCGCGCGGAGCAGTCCTTATGAGGTCAACATTTTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGGTTGGTTCGACCACATAATTGTCAGTTCTACATAAGTGCATATTGACTTCTAGTCGCATTTAGACACATTTCAATTGAGAAAATTTCGTACGTTAGAAATCCGATGGGTTTAGTTTTCAATAATATGGG] [+] EMBL CB665482 [ ATTTAAGCTTATAACTGGGAATTGTTGTTTGAAACTGAATAGGGATGTTGGCAGGCTGGGAAACATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTACCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCTTCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATAATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAAGATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTGGTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAACTACTTTTGAGAAGATGGGCCGCACATCACAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGCAAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAACTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTCCATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCTCATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTGTTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGGAGGTTAATCCAGTTAAAGGGCTTGATG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11669#0 ------------------CGCTTGCCGGTGGACTGGAGTGGAGTGGCGGTGGCGGTGGCG 42 consensus_11669#2 TATTTTCTTTGGTCTATCCGCTTGCCGGTGGACTGGAGTGGAGTGGCGGTGGCGGTGGCG 60 consensus_11669#1 ------------------------------------------------------------ consensus_11669#0 CACACTCGCGGCGGCTCGTGCGCCCCTCCGCCTATCGCCGCCGGCGGCCGGCCACCCACC 102 consensus_11669#2 CACACTCGCGGCGGCTCGTGCGCCCCTCCGCCTATCGCCGCCGGCGGCCGGCCACCCACC 120 consensus_11669#1 ------------------------------------------------------------ consensus_11669#0 CTCGAACGCCGCGGTGACGCCGGTGAGTTCTCGCTGCCCTATCCCCTAAACCAGATTTTC 162 consensus_11669#2 CTCGAACGCCGCGGTGACGCCGGTGAGTTCTCGCTGCCCTATCCCCTAAACCAGATTTTC 180 consensus_11669#1 ------------------------------------------------------------ consensus_11669#0 CGAGCGGTGCCATGAGAGTCCGTCGAGTTCGCCTGAGCCATTCAACTCCGCCGTGAGGGT 222 consensus_11669#2 CGAGCGGTGCCATGAGAGTCCGTCGAGTTCGCCTGAGCCATTCAACTCCGCCGTGAGGGT 240 consensus_11669#1 ------------------------------------------------------------ consensus_11669#0 GGGGGTCTCCGACGTGCCCGTCGGCGCGATTCCGGGAAGCCGCCGCCGCCGTCGTCCTGC 282 consensus_11669#2 GGGGGTCTCCGACGTGCCCGTCGGCGCGATTCCGGGAAGCCGCCGCCGCCGTCGTCCTGC 300 consensus_11669#1 ------------------------------------------------------------ consensus_11669#0 CACTGGGGCTGCCTCAATCAGGTGCTCTGTTTGCAGCGCCATCCACGAGACGGGTTTATC 342 consensus_11669#2 CACTGGGGCTGCCTCAATCAGGTGCTCTGTTTGCAGCGCCATCCACGAGACGGGTTTATC 360 consensus_11669#1 ------------------------------------------------------------ consensus_11669#0 CCATTAGCCCACTACCTTTCCCTACATTTCTCTCTTCTTCGCCGCAGCTCGATTTGCACA 402 consensus_11669#2 CCATTAGCCCACTACCTTTCCCTACATTTCTCTCTTCTTCGCCGCAGCTCGATTTGCACA 420 consensus_11669#1 ------------------------------------------------TTTATTG--ATA 10 * *** * * consensus_11669#0 AGTTCGGTTTCATGATTTTTCTTTCAACACCAAAGCGAATAGCATTACATCAGAATCTGT 462 consensus_11669#2 AGTTCGGTTTCATGATTTTTCTTTCAACACCAAAGCGAATAGCATTACATCAGAATCTGT 480 consensus_11669#1 TTTTTATTATTTTCTTTGGTCTATCCGCTTGCCGGTGGACTGGAGTGGAGTGG---CGGT 67 ** * * * ** *** ** * * * * * * * * * * ** consensus_11669#0 GCATGTTCATGCGCAGTTTCATTCTTTGGACGATGAATCACCGTACATTGAAAGTATATT 522 consensus_11669#2 GCATGTTCATGCGCAGTTTCATTCTTTGGACGATGAATCACCGTACATTGAAAGTATATT 540 consensus_11669#1 G-GCGGTGGCGCACACTCGCGGCGGCTCG--TGCGCCCCTCCGCCTATCGCCGCCGGGGC 124 * * * ** ** * * * * * * *** ** * consensus_11669#0 TAAGTTTATAACTGGGAATTGTTGTTTGAAACTGAATAGGGATGTTGGCAGGCTGGGAAA 582 consensus_11669#2 TAAGTTTATAACTGGGAATTGTTGTTTGAAACTGAATAGGGATGTTGGCAGGCTGGGAAA 600 consensus_11669#1 CGGCCACCCACCCTCGAACGCCGCGGTGACGCCG-----GGATGTTGGCAGGCTGGGAAA 179 * * *** *** * * ********************* consensus_11669#0 CATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTA 642 consensus_11669#2 CATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTA 660 consensus_11669#1 CATTGGCTTCCTGTCCTGCGAGTGTCATTCATTCGTTGATCAAAGTGTTATTAGTGGTTA 239 ************************************************************ consensus_11669#0 CCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCT 702 consensus_11669#2 CCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCT 720 consensus_11669#1 CCTTCATGCAGTGGCCAGCCACTGCTATCGTTGTTGTTCCGAATTCAAACTGTTTTACCT 299 ************************************************************ consensus_11669#0 TCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATA 762 consensus_11669#2 TCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATA 780 consensus_11669#1 TCGACAACAATAGCCGCCTTGTGGACTTTGCAGATCTAATCGGGAAGAACTTTGAATATA 359 ************************************************************ consensus_11669#0 ATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAA 822 consensus_11669#2 ATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAA 840 consensus_11669#1 ATGAAAAGGGCTCAGTACCTTCTGATTTGGTTGTCCAGTTCTGCAAAGATGTGCAGAGAA 419 ************************************************************ consensus_11669#0 GATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTG 882 consensus_11669#2 GATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTG 900 consensus_11669#1 GATCTCAAGCGGGATATACGGACTTTGGACGTTTTATCAGTTCTCGCTCTTTTATAACTG 479 ************************************************************ consensus_11669#0 GTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAA 942 consensus_11669#2 GTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAA 960 consensus_11669#1 GTTCACAGCCTATTGACTTTATTCAGACATTCCAATATGGAGATCTAGTGCACTGTGAAA 539 ************************************************************ consensus_11669#0 CTACTTTTGAGAAGATGGGCCGCACATCACAGGTTTGTGTCTAAATTCTGATCAGCTTCT 1002 consensus_11669#2 CTACTTTTGAGAAGATGGGCCGCACATCACAGGT-------------------------- 994 consensus_11669#1 CTACTTTTGAGAAGATGGGCCGCACATCACAGGT-------------------------- 573 ********************************** consensus_11669#0 TTCTTATTTTCACTACTTTTCGGATTTTTGTGGTCCCAATTTAGGCTTGTGGATGCATTT 1062 consensus_11669#2 ------------------------------------------------------------ consensus_11669#1 ------------------------------------------------------------ consensus_11669#0 CTGAACATATTTCAGGTAAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGC 1122 consensus_11669#2 -----------------AAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGC 1037 consensus_11669#1 -----------------AAACATCATATGCGGTCAATGCCCAAATAAAGAATGCAAAGGC 616 ******************************************* consensus_11669#0 AAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAA 1182 consensus_11669#2 AAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAA 1097 consensus_11669#1 AAACAAGGATGCATCTGTAGTATATCTTATGATGAACTGATGTGCAGGGTGACTGTTGAA 676 ************************************************************ consensus_11669#0 CTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTC 1242 consensus_11669#2 CTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTC 1157 consensus_11669#1 CTTGCTATCCCATGTCCTAAAAGTGGTCCAAGAGTATTTAAGGGTTTCACTGTCGGATTC 736 ************************************************************ consensus_11669#0 CATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCT 1302 consensus_11669#2 CATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCT 1217 consensus_11669#1 CATCCCCGGTCATCAGAGTTGGTTTATAATGGATTGACTCAACTGGGATTTGAGCAATCT 796 ************************************************************ consensus_11669#0 CATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTG 1362 consensus_11669#2 CATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTG 1277 consensus_11669#1 CATCATGAGTTCAGCTTTCAGGGTGAGCAGAGTCATGTATCCCTGTATCTTAGTGCAGTG 856 ************************************************************ consensus_11669#0 TTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTT 1422 consensus_11669#2 TTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTT 1337 consensus_11669#1 TTTTCACTCTCAGGACTTGTTGGAAAACCTTCCTTGAAGGTTAATCCAGTTAAAGGGCTT 916 ************************************************************ consensus_11669#0 GATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCCTGTCCCCTACA 1482 consensus_11669#2 GATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCCTGTCCCCTACA 1397 consensus_11669#1 GATGTGACACTGACAGGATCAGGGACCAACGGTGCTATGCCTACTACCCTGTCCCCTACA 976 ************************************************************ consensus_11669#0 ATTCTGAATGTGATCTGGAGATGTGAAATCGCGCGGAGCAGTCCTTATGAGGTCAACATT 1542 consensus_11669#2 ATTCTGAATGTGATCTGGAGATGTGAAATCGCGCGGAGCAGTCCTTATGAGGTCAACATT 1457 consensus_11669#1 ATTCTGAATGTGATCTGGAGATGTGAAATCGCGCGGAGCAGTCCTTATGAGGTCAACATT 1036 ************************************************************ consensus_11669#0 TTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGCTTCA 1602 consensus_11669#2 TTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTG----- 1512 consensus_11669#1 TTGATTCCAGTAGAAGGCTATGATCCAATTGAATTTACGCTCACCAAAGAATGTGTTCAT 1096 ******************************************************* consensus_11669#0 TTGT------GTTGTCAAGTCTACTTTGTTGTGGAGGTTTCATCTACAAAACACGTGTCC 1656 consensus_11669#2 ----------GTTGGTTCGACCACATAATTGTCAGTTCTACAT-----AAGTGCATATTG 1557 consensus_11669#1 ATACAAGAAAAAGAGAGTAATCCAATGAGAGGCTGGGCAACATTTGG-GATTATTTCTTG 1155 * * *** * * * consensus_11669#0 AACATCAGTCTGGTT-TATATGCGCTGCCTGGGATGACCATCTTGTCTGCCTTCCTAGAT 1715 consensus_11669#2 ACTTCTAGTCGCATT-TAGACACATTTCAATTGA-GAAAATTTCGTACG---TTAGAAAT 1612 consensus_11669#1 CATCTTCATTGTGTTGTCAAGTCTACTTTGTTGT-GGAGGTTTCAT------CTACAAAA 1208 * ** * * * * * * * * * * consensus_11669#0 GCGGTTGGTGGACCAAGCTACATGAGAGCAGATGATCATGGCGGAAACCATGCAAGCCAA 1775 consensus_11669#2 CCGATGGGT---TTAGTTTTCAATAATATGGG---------------------------- 1641 consensus_11669#1 CACGTGTCCAACATCAGTCTGGTTTATATGCGCTGCCTGGGATGACCATCTTGTCTGCCT 1268 * consensus_11669#0 GCATCATGGGAACGCATGCCTGGTACCTCACAAGCAGCAGAGCATGGCACCAAAGATAGG 1835 consensus_11669#2 ------------------------------------------------------------ consensus_11669#1 TCCTAGATGCGGTTGGTGGACCAAGCTACATGAGAGCAGATGATCATGGCGGAAACCATG 1328 consensus_11669#0 AGATACGGATCACTTTGAACTGAACGATGCTTTAGTTTTTGAGGGTTGCTTTTTTGTAAG 1895 consensus_11669#2 ------------------------------------------------------------ consensus_11669#1 CAAGCCAAGCATCATGGGAACGCATGCCTGGTACCTCACAAGCAGCAGAGCATGGCACCA 1388 consensus_11669#0 TTTGAAGTATTCTGTAATCAGACAAACTCTGCACTTCATCTGCAGTTGAGCTTCCGAAGC 1955 consensus_11669#2 ------------------------------------------------------------ consensus_11669#1 AAGATAGGAGATACGGATCACTTTGAACTGAACGATGCTTTAGTTTTTGAGGGTTGCTTT 1448 consensus_11669#0 ATTGCTTATCATCTTTTCAGCTTAGATGGTGTTATGAATTGTGGTGGTGGATCATTCAGC 2015 consensus_11669#2 ------------------------------------------------------------ consensus_11669#1 TTTGTAAGTTTGAAGTATTCTGTAATCAGACAAACTCTGCACTTCATCGGCAGTTGAGCT 1508 consensus_11669#0 ATGCCACCATCGTCATCGCCATCCGATCGACGTGCATGCTCATTAGCAGATACTAGACCT 2075 consensus_11669#2 ------------------------------------------------------------ consensus_11669#1 TCCGAAGCATTGCTTATCATCTTTTCAGCTTAGATGGTGTTATGAATTGTGGTGGTGGAT 1568 consensus_11669#0 CTGTTCTTAGATAGTGCTCCCTCCAGTTTTTAATGCTCAACATTATTGACTTTGGACATA 2135 consensus_11669#2 ------------------------------------------------------------ consensus_11669#1 CATTCACCATGCCACCATCGTCATCGCCATCCGATCGACGTGCATGCTCATTAGCAGATA 1628 consensus_11669#0 TGTTTAATGATTTATCTTATTAAAAAACTTATGTAATTATAATTTATTTTGTTATTTGTT 2195 consensus_11669#2 ------------------------------------------------------------ consensus_11669#1 CTAGACCTCTGTTCTTAGATAGTGCTCCCTCCAGTTTTTAATGCTCAACATTATTGACTT 1688 consensus_11669#0 TTATTATTAAAGAAAAAAAA---------------------------------------- 2215 consensus_11669#2 ------------------------------------------------------------ consensus_11669#1 TGGACATATGTTTAATGATTTATCTTATTAAAAAACTTATGTAATTATAATTTATTTTGT 1748 consensus_11669#0 ------ consensus_11669#2 ------ consensus_11669#1 TAAAAA 1754 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||