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Oryza sativa
cluster # 11690 cluster # 11690       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11690#0 length = 1480 sequences # 1  
consensus_11690#1 length = 1006 sequences # 7  
consensus_11690#2 length = 459 sequences # 1  

consensusID : consensus_11690#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1480
fasta sequence
                              [ATCAAGTGATCATCTCAGTGTTAGCTAAGCTAGCTAGTAGCTTTGATCAGTGGCAGCCAGCCATGGGGAACGGCAAGGTGTACGCGACGGTGGTGCTCATCAGGCTGATATACGCCGGGATGCACATACTCACCAAGGCCTCCTTCAACGAGGGCGCCAGCACCACGGTGTTCGTGTTCTACCGCCACGCCGTCGCCGCCATCTTCTTGCTACCCTTCGCCTACTTCCTCGAGATCAGGAAGAAGCAGGCGCCGCCGCTGACGTTTCGGCTGTCTGCCAAGATCTTCGTCCATGGATTCTATGGGATGGCCGGAACGATAAACCTGTACAGCATTGGCCTGAATTACGCGTCGGCCACCTCGTCGTCGGCCATCTTCAACATCGTGCCGGTGGTCGCCTTCATCTTGGCTGTCATGTTCAGGATGGAGACTCTGAACCTGAAGAGCACCCATGGCATGGCGAAAGCATCGGGGATACTCCTCTGCATCGGCGGCGTCATCGTGCTGGCTCTGTACCAAGGCCCGGAGTTCAAGTCCTTGAACCACCACCAGCTCCTCCACCATGCGAGCGCCGCCGCCGCCGCCGCGGCGCATTCCAAGAAGAACTGGGCGCTGGGGATCTTCCTGATGACCACCTCCGTCGTGATATGGTCGTTCTGGACGGTGAAGCAGGGGCCGTTGCTGCTGGAGTACCCGTCGAAGCTGATGAACACGACGCTGCAGTGCGTGTTCGCGAGCGTGCAGTCGCTGGTGATCGCGCTCGTCCTCGAGAGGGACTTCTCCCGGTGGATCCTCCCCGGCGTCGTCAGCCTCGTCGGCGTCCTCTTCACCGGCATCGTGGTGGCGGCGATCTCGTACTACCTGCAGATATGGGTGATCGAGAAGAAGGGCCCCGTGTTCCTGTCCATGTCGATGCCGCTCAGCCTCGTCTTCACCATGGCCATCGCCTCGTTCCTGCTCGGCGAGGACGTCAGCCTAGGAAGCATTATCGGCAGCCTGCTGCTCGTCGCCGGCCTCTACAACGTGCTATGGGGCAAGAGCCGGGAGGAACACGGCGGCGGCGGCGTCGTCGTTGCCGGCGCTGGCACCGCCGGCGGGGAGAAGGATGGCGCGGTGGCTCCCGCCGCAGCCGACGTGGTGATGGCCAAAGTTTGACCGACACGGTGGTGCACCACGTGTCGCGGCGGCGTGGAAGCGATCGGAAAGAGCGAAGCTACAAGTACAAAGGATGGGGGTGGTGATGACCGGTGAATCTCGAATATCTTTTGCGGTGGCCGGGGCACGGGCGACCGGTGGTGGTGCGGCGGCGGCGGCGGCGGCAGAAAGGGTTAGGCTAGGCAAGCTAGACTACCCGGTGAAGTGGTGTACTCAGCTCGTGTCAACTGATAAATCTTTGTACTATTATTCCTGTTTTTTTTTAATACTAGTATAAGACACATGTGCTTTGCAACTGGATTTTTCACATTTTGGTCCTTTTAAAA]

[+] EMBL AK071512             [ATCAAGTGATCATCTCAGTGTTAGCTAAGCTAGCTAGTAGCTTTGATCAGTGGCAGCCAGCCATGGGGAACGGCAAGGTGTACGCGACGGTGGTGCTCATCAGGCTGATATACGCCGGGATGCACATACTCACCAAGGCCTCCTTCAACGAGGGCGCCAGCACCACGGTGTTCGTGTTCTACCGCCACGCCGTCGCCGCCATCTTCTTGCTACCCTTCGCCTACTTCCTCGAGATCAGGAAGAAGCAGGCGCCGCCGCTGACGTTTCGGCTGTCTGCCAAGATCTTCGTCCATGGATTCTATGGGATGGCCGGAACGATAAACCTGTACAGCATTGGCCTGAATTACGCGTCGGCCACCTCGTCGTCGGCCATCTTCAACATCGTGCCGGTGGTCGCCTTCATCTTGGCTGTCATGTTCAGGATGGAGACTCTGAACCTGAAGAGCACCCATGGCATGGCGAAAGCATCGGGGATACTCCTCTGCATCGGCGGCGTCATCGTGCTGGCTCTGTACCAAGGCCCGGAGTTCAAGTCCTTGAACCACCACCAGCTCCTCCACCATGCGAGCGCCGCCGCCGCCGCCGCGGCGCATTCCAAGAAGAACTGGGCGCTGGGGATCTTCCTGATGACCACCTCCGTCGTGATATGGTCGTTCTGGACGGTGAAGCAGGGGCCGTTGCTGCTGGAGTACCCGTCGAAGCTGATGAACACGACGCTGCAGTGCGTGTTCGCGAGCGTGCAGTCGCTGGTGATCGCGCTCGTCCTCGAGAGGGACTTCTCCCGGTGGATCCTCCCCGGCGTCGTCAGCCTCGTCGGCGTCCTCTTCACCGGCATCGTGGTGGCGGCGATCTCGTACTACCTGCAGATATGGGTGATCGAGAAGAAGGGCCCCGTGTTCCTGTCCATGTCGATGCCGCTCAGCCTCGTCTTCACCATGGCCATCGCCTCGTTCCTGCTCGGCGAGGACGTCAGCCTAGGAAGCATTATCGGCAGCCTGCTGCTCGTCGCCGGCCTCTACAACGTGCTATGGGGCAAGAGCCGGGAGGAACACGGCGGCGGCGGCGTCGTCGTTGCCGGCGCTGGCACCGCCGGCGGGGAGAAGGATGGCGCGGTGGCTCCCGCCGCAGCCGACGTGGTGATGGCCAAAGTTTGACCGACACGGTGGTGCACCACGTGTCGCGGCGGCGTGGAAGCGATCGGAAAGAGCGAAGCTACAAGTACAAAGGATGGGGGTGGTGATGACCGGTGAATCTCGAATATCTTTTGCGGTGGCCGGGGCACGGGCGACCGGTGGTGGTGCGGCGGCGGCGGCGGCGGCAGAAAGGGTTAGGCTAGGCAAGCTAGACTACCCGGTGAAGTGGTGTACTCAGCTCGTGTCAACTGATAAATCTTTGTACTATTATTCCTGTTTTTTTTTAATACTAGTATAAGACACATGTGCTTTGCAACTGGATTTTTCACATTTTGGTCCTTTTAAAA]


>consensus_11690#0 ATCAAGTGATCATCTCAGTGTTAGCTAAGCTAGCTAGTAGCTTTGATCAGTGGCAGCCAG CCATGGGGAACGGCAAGGTGTACGCGACGGTGGTGCTCATCAGGCTGATATACGCCGGGA TGCACATACTCACCAAGGCCTCCTTCAACGAGGGCGCCAGCACCACGGTGTTCGTGTTCT ACCGCCACGCCGTCGCCGCCATCTTCTTGCTACCCTTCGCCTACTTCCTCGAGATCAGGA AGAAGCAGGCGCCGCCGCTGACGTTTCGGCTGTCTGCCAAGATCTTCGTCCATGGATTCT ATGGGATGGCCGGAACGATAAACCTGTACAGCATTGGCCTGAATTACGCGTCGGCCACCT CGTCGTCGGCCATCTTCAACATCGTGCCGGTGGTCGCCTTCATCTTGGCTGTCATGTTCA GGATGGAGACTCTGAACCTGAAGAGCACCCATGGCATGGCGAAAGCATCGGGGATACTCC TCTGCATCGGCGGCGTCATCGTGCTGGCTCTGTACCAAGGCCCGGAGTTCAAGTCCTTGA ACCACCACCAGCTCCTCCACCATGCGAGCGCCGCCGCCGCCGCCGCGGCGCATTCCAAGA AGAACTGGGCGCTGGGGATCTTCCTGATGACCACCTCCGTCGTGATATGGTCGTTCTGGA CGGTGAAGCAGGGGCCGTTGCTGCTGGAGTACCCGTCGAAGCTGATGAACACGACGCTGC AGTGCGTGTTCGCGAGCGTGCAGTCGCTGGTGATCGCGCTCGTCCTCGAGAGGGACTTCT CCCGGTGGATCCTCCCCGGCGTCGTCAGCCTCGTCGGCGTCCTCTTCACCGGCATCGTGG TGGCGGCGATCTCGTACTACCTGCAGATATGGGTGATCGAGAAGAAGGGCCCCGTGTTCC TGTCCATGTCGATGCCGCTCAGCCTCGTCTTCACCATGGCCATCGCCTCGTTCCTGCTCG GCGAGGACGTCAGCCTAGGAAGCATTATCGGCAGCCTGCTGCTCGTCGCCGGCCTCTACA ACGTGCTATGGGGCAAGAGCCGGGAGGAACACGGCGGCGGCGGCGTCGTCGTTGCCGGCG CTGGCACCGCCGGCGGGGAGAAGGATGGCGCGGTGGCTCCCGCCGCAGCCGACGTGGTGA TGGCCAAAGTTTGACCGACACGGTGGTGCACCACGTGTCGCGGCGGCGTGGAAGCGATCG GAAAGAGCGAAGCTACAAGTACAAAGGATGGGGGTGGTGATGACCGGTGAATCTCGAATA TCTTTTGCGGTGGCCGGGGCACGGGCGACCGGTGGTGGTGCGGCGGCGGCGGCGGCGGCA GAAAGGGTTAGGCTAGGCAAGCTAGACTACCCGGTGAAGTGGTGTACTCAGCTCGTGTCA ACTGATAAATCTTTGTACTATTATTCCTGTTTTTTTTTAATACTAGTATAAGACACATGT GCTTTGCAACTGGATTTTTCACATTTTGGTCCTTTTAAAA



consensusID : consensus_11690#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1006
fasta sequence
                              [CTCCTTCCCCAACTTGCCTCCAATTCCAAGTTCCAACCCTCCACCTCCCTATATAACACAGCTCTTCCCACCCCGTCAAATCCCACGACTCAAAACCACCAAAACTCACCAAGCAAAGCACCAGCGA-GGAAGAACAAGAAGGAAGGTGAAGAGAAGCCGCGTTTTGTTTCTCGCGAAAGTGTTTGTTGATATGGCGATGGAGGGGAAGAGCAGGAGGTTCGCGGTGGCGTGCGGGGTGCTCAGCCAGTACGTGAGGGCGGA-CAGAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGGGCGGTGACGACGCTGAGCCTGATGCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGGAGGGAGGTTGGGGAGGAGGAGGCGGGGCCAGCGACGGCGCCGGCCGCGCCGC-TGACCATCTTCTACGGTGGGAGGATGGTCGTCTTCGAGGACTTCCCCGCGGACAAGGCGGCGGAGGTGATGCGCATGGCCTCCTCCGGGATGGCGGCGGCGCCGGCTCAGCGGGAGGGCGCCGCGCTCGCGGACATGCCCATCATGAGGAAGGCGTCGCTGCAGCGGTTCTTCGCCAAGCGCAAGGACCGCCTCGCGGCGACCACCCCCTACGCCCGCCCGTCGCCGGCGGAGACCAAGGCCTCCGAGCCGGAGGAGAAGAAGACGCCCACCTCATGGCTGGACCTCGCCGCCTCCGCCTCCGCCGCCGCGCGCCGTGACAGCCTCACCATCGCGCTGT-GATCTGCGC-GGC-TTTGACC-AAAAAC-GACTTAA-GACGCGC-GCGCGCTCTCAGCGC-GCAAGAGGATTGATTCACTTTGCTCATACCCATGGCGACGTAGAGTTTTTACCGCTTTTGCTATACTTCTTTGTAAAATTCGATAGGGAGATTGAATTGATGGGAAACCCCTTGTGCCTGTTCTTTTTTGTCCCACTGTATCAAATATTCTTTCCTGTGCAAATTAAGCCAACTTTTTAGTTGTTACCTCAACAAAAAAAA]

[+] EMBL AK120087             [CTCCTTCCCCAACTTGCCTCCAATTCCAAGTTCCAACCCTCCACCTCCCTATATAACACAGCTCTTCCCACCCCGTCAAATCCCACGACTCAAAACCACCAAAACTCACCAAGCAAAGCACCAGCGA GGAAGAACAAGAAGGAAGGTGAAGAGAAGCCGCGTTTTGTTTCTCGCGAAAGTGTTTGTTGATATGGCGATGGAGGGGAGGAGCAGGAGGTTCGCGGTGGCGTGCGGGGTGCTCAGCCAGTACGTGAGGGCGGAGCAGAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGGGCGGTGACGACGCTGAGCCTGATGCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGGAGGGAGGTTGGGGAGGAGGAGGCGGGGCCAGCGACGGCGCCGGCCGCGCCGC TGACCATCTTCTACGGTGGGAGGATGGTCGTCTTCGAGGACTTCCCCGCGGACAAGGCGGCGGAGGTGATGCGCATGGCCTCCTCCGGGATGGCGGCGGCGCCGGCTCAGCGGGAGGGCGCCGCGCTCGCGGACATGCCCATCATGAGGAAGGCGTCGCTGCAGCGGTTCTTCGCCAAGCGCAAGGACCGCCTCGCGGCGACCACCCCCTACGCCCGCCCGTCGCCGGCGGAGACCAAGGCCTCCGAGCCGGAGGAGAAGAAGACGCCCACCTCATGGCTGGACCTCGCCGCCTCCGCCTCCGCCGCCGCGCGCCGTGACAGCCTCACCATCGCGCTGT GATCTGCGC GGC TTTGACC AAAAAC GACTTAA GACGCGC GCGCGCTCTCAGCGC GCAAGAGGATTGATTCACTTTGCTCATACCCATGGCGACGTAGAGTTTTTACCGCTTTTGCTATACTTCTTTGTAAAATTCGATAGGGAGATTGAATTGATGGGAAACCCCTT                                                                                        ]
[+] EMBL AK067971             [                                                                                            AAACCACCAAAACTCACCAAGCAAAGCACCAGCGA GGAAGAACAAGAAGGAAGGTGAAGAGAAGCCGCGTTTTGTTTCTCGCGAAAGTGTTTGTTGATATGGCGATGGAGGGGAAGAGCAGGAGGTTCGCGGTGGCGTGCGGGGTGCTCAGCCAGTACGTGAGGGCGGAGCAGAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGGGCGGTGACGACGCTGAGCCTGATGCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGGAGGGAGGTTGGGGAGGAGGAGGCGGGGCCAGCGACGGCGCCGGCCGCGCCGC TGACCATCTTCTACGGTGGGAGGATGGTCGTCTTCGAGGACTTCCCCGCGGACAAGGCGGCGGAGGTGATGCGCATGGCCTCCTCCGGGATGGCGGCGGCGCCGGCTCAGCGGGAGGGCGCCGCGCTCGCGGACATGCCCATCATGAGGAAGGCGTCGCTGCAGCGGTTCTTCGCCAAGCGCAAGGACCGCCTCGCGGCGACCACCCCCTACGCCCGCCCGTCGCCGGCGGAGACCAAGGCCTCCGAGCCGGAGGAGAAGAAGACGCCCACCTCATGGCTGGACCTCGCCGCCTCCGCCTCCGCCGCCGCGCGCCGTGACAGCCTCACCATCGCGCTGT GATCTGCGC GGC TTTGACC AAAAAC GACTTAA GACGCGC GCGCGCTCTCAGCGC GCAAGAGGATTGATTCACTTTGCTCATACCCATGGCGACGTAGAGTTTTTACCGCTTTTGCTATACTTCTTTGTAAAATTCGATAGGGAGATTGAATTGATGGGAAACC                                                                                            ]
[+] EMBL OSS16501A            [                                                                                                     AAACTCACCAAGCAAAGCACCAGCGANGGAAGAACAAGAAGGAAGGTGAAGAGAAGCCGCGTTTTGTTTCTCGCGAAAGTGTTTGTTGATATGGCGATGGAGGGGAAGAGCAGGAGGTTCGCGGTGGCGTGCGGGGTGCTCAGCCAGTACGTNAGGGCGGA CAGAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGGGCGGTGACGACGCTGAGCCTGATGCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGGAGGGAGGTTGGGGAGGAGGAGGCGGGGCCAGCAACGGCGCCGGCCGCG CGCTTGACCATCTTCTACGGTTGGAGGATGGTCGTNTTCGAGGACTTTCCCGCGGAANAAGCGGCGGAGGTTATNCGCATTGCCTCCTCCGGGATTGCGGCGGCG CGGCTNAACGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU089805             [                                                                                                     AAACTCACCAAGCAAAGCACCANCGATGGAAGAACAAGAAGGAAGGTGAAGAGAAGCCGCGTTTTGTTTCTCGCGAAAGTGTTTGTTGATATGGCGATGGAGGGGAAGAGCAGGAGGTTCGCGGTGGCGTNCGGGGTGCTCAGCCAGTACGTNAGGGCGGA NAGAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGGGCGGTGACGACGCTGAGCCTGATGCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGGAGGGAGGTTGGGGAGGAGGAGGCGGGGCCAGCGAAGGCGNCGGCCGCG CGCTTGACCATCTTCTACGGTGGGAGGATGGTCGTCTTCGAGGACTTCCCCGCGGACAAGGCGGCGGAGGTTATNCGCATTGCCTCCTCCGGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU162678             [                                                                                                                              A GGAAGAACAAGAAGGAAGGTGAAGAGAAGCCGCGTTTTGTTTCTCGCGAAAGTGTTTGTTGATATGGCGATGGAGGGGAAGAGCAGGAGGTTCGCGGTGGCGTGCGGGGTGCTCAGCCAGTACGTGAGGGCGGA CAGAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGGGCGGTGACGACGCTGAGCCTGATGCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGGAGGGAGGTTGGGGAGGAGGAGGCGGGGCCAGCGACGGCGCCGGCCGCGCCGC TGACCATCTTCTACGGTGGGAGGATGGTCGTCTTCGAGGACTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU089806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     cCCATCGCGCTGTNGATCTGCGCAGGCTTTTGACCTAAAAACNGACTTAANGACGC    NGCGCTCTCAGCGCTGCAAGAGGATTGATTCACTTTGCTCATACCCATGGCGACGTAGAGTTTTTACCGCTTTTGCTATACTTCTTTGTAAAATTCGATAGGGAGATTGAATTGATGGGAAACCCCTTGTGCCTGTTCTTTTTTGTCCCACTGTATCAAATATTCTTTCCTGTGCAAATTAAGCCAACTTTTTAGTTGTTACCTCAACAAAAAAAA]
[+] EMBL AU056373             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gt TTTGACN AAAAAC GATTTAA GACGCGCNGCGNTCT TCAGCGC GNAAGAGGATTGATTCACTTTGCTCATACCCATGGCGACGTAGAGTTTTTACCGNTTTTGCTATACTTCTTTGTAAAATTCGATAGGGAGATTGAATTGATGGGAAACCCCTTGTGCCTGTTCTTTTTTGTCCCACTGTATCAAATATTCTTTCCTGTGCAAAaa                                    ]


>consensus_11690#1 CTCCTTCCCCAACTTGCCTCCAATTCCAAGTTCCAACCCTCCACCTCCCTATATAACACA GCTCTTCCCACCCCGTCAAATCCCACGACTCAAAACCACCAAAACTCACCAAGCAAAGCA CCAGCGAGGAAGAACAAGAAGGAAGGTGAAGAGAAGCCGCGTTTTGTTTCTCGCGAAAGT GTTTGTTGATATGGCGATGGAGGGGAAGAGCAGGAGGTTCGCGGTGGCGTGCGGGGTGCT CAGCCAGTACGTGAGGGCGGACAGAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGG GCGGTGACGACGCTGAGCCTGATGCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGG AGGGAGGTTGGGGAGGAGGAGGCGGGGCCAGCGACGGCGCCGGCCGCGCCGCTGACCATC TTCTACGGTGGGAGGATGGTCGTCTTCGAGGACTTCCCCGCGGACAAGGCGGCGGAGGTG ATGCGCATGGCCTCCTCCGGGATGGCGGCGGCGCCGGCTCAGCGGGAGGGCGCCGCGCTC GCGGACATGCCCATCATGAGGAAGGCGTCGCTGCAGCGGTTCTTCGCCAAGCGCAAGGAC CGCCTCGCGGCGACCACCCCCTACGCCCGCCCGTCGCCGGCGGAGACCAAGGCCTCCGAG CCGGAGGAGAAGAAGACGCCCACCTCATGGCTGGACCTCGCCGCCTCCGCCTCCGCCGCC GCGCGCCGTGACAGCCTCACCATCGCGCTGTGATCTGCGCGGCTTTGACCAAAAACGACT TAAGACGCGCGCGCGCTCTCAGCGCGCAAGAGGATTGATTCACTTTGCTCATACCCATGG CGACGTAGAGTTTTTACCGCTTTTGCTATACTTCTTTGTAAAATTCGATAGGGAGATTGA ATTGATGGGAAACCCCTTGTGCCTGTTCTTTTTTGTCCCACTGTATCAAATATTCTTTCC TGTGCAAATTAAGCCAACTTTTTAGTTGTTACCTCAACAAAAAAAA



consensusID : consensus_11690#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 459
fasta sequence
                              [AGTGGGACAAAAAAGAACAGGCACAAGGTGTTTCCCATCAATTCAATCTCCCTATCGAATTTTACAAAGAAGTATAGCAAAAGCGGTAAAAACTCTACGTCGCCATGGGTATGAGCAAAGTGAATCAATCCTCTTGCGCGCTGAGAGCGCGCGCGCGTCTCAAGTCGTTTTTGGTCAAAGCCGCGCAGATCACAGCGCGATGGTGAGGCTGTCACGGCGCGCGGCGGCGGAGGCGGCAGAAAGGGTTAGGCTAGGCAAGCTAGACTACCCGGTGAAGTGGTGTACTCAGCTCGTGTCAACTGATAAATCTTTGTACTATTATTCCGGTTTTTTTTTAATACTAGTATAAGACACATGTGCTTTGCAACGGACCAAAGTTGGCTAGATGAGTGTGCTTATCAATGGAGCCAGGCCCACATATGATCGGGGATTGGCCGGGTGGGTGAATTATAAAAAAAA]

[-] EMBL OSA420735            [AGTGGGACAAAAAAGAACAGGCACAAGGTGTTTCCCATCAATTCAATCTCCCTATCGAATTTTACAAAGAAGTATAGCAAAAGCGGTAAAAACTCTACGTCGCCATGGGTATGAGCAAAGTGAATCAATCCTCTTGCGCGCTGAGAGCGCGCGCGCGTCTCAAGTCGTTTTTGGTCAAAGCCGCGCAGATCACAGCGCGATGGTGAGGCTGTCACGGCGCGCGGCGGCGGAGGCGGCAGAAAGGGTTAGGCTAGGCAAGCTAGACTACCCGGTGAAGTGGTGTACTCAGCTCGTGTCAACTGATAAATCTTTGTACTATTATTCCGGTTTTTTTTTAATACTAGTATAAGACACATGTGCTTTGCAACGGACCAAAGTTGGCTAGATGAGTGTGCTTATCAATGGAGCCAGGCCCACATATGATCGGGGATTGGCCGGGTGGGTGAATTATAAAAAAAA]


>consensus_11690#2 AGTGGGACAAAAAAGAACAGGCACAAGGTGTTTCCCATCAATTCAATCTCCCTATCGAAT TTTACAAAGAAGTATAGCAAAAGCGGTAAAAACTCTACGTCGCCATGGGTATGAGCAAAG TGAATCAATCCTCTTGCGCGCTGAGAGCGCGCGCGCGTCTCAAGTCGTTTTTGGTCAAAG CCGCGCAGATCACAGCGCGATGGTGAGGCTGTCACGGCGCGCGGCGGCGGAGGCGGCAGA AAGGGTTAGGCTAGGCAAGCTAGACTACCCGGTGAAGTGGTGTACTCAGCTCGTGTCAAC TGATAAATCTTTGTACTATTATTCCGGTTTTTTTTTAATACTAGTATAAGACACATGTGC TTTGCAACGGACCAAAGTTGGCTAGATGAGTGTGCTTATCAATGGAGCCAGGCCCACATA TGATCGGGGATTGGCCGGGTGGGTGAATTATAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11690#0      ATCAAGTGATCATCTCAGTGTTAGCTAAGCTAGCTAGTAGCTTTGATCAGTGGCAGCCAG 60
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      ------------------------------------------------------------
                                                                                   

consensus_11690#0      CCATGGGGAACGGCAAGGTGTACGCGACGGTGGTGCTCATCAGGCTGATATACGCCGGGA 120
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      ------------------------------------------------------------
                                                                                   

consensus_11690#0      TGCACATACTCACCAAGGCCTCCTTCAACGAGGGCGCCAGCACCACGGTGTTCGTGTTCT 180
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      ------------------------------------------------------------
                                                                                   

consensus_11690#0      ACCGCCACGCCGTCGCCGCCATCTTCTTGCTACCCTTCGCCTACTTCCTCGAGATCAGGA 240
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      ------------------------------------------------------------
                                                                                   

consensus_11690#0      AGAAGCAGGCGCCGCCGCTGACGTTTCGGCTGTCTGCCAAGATCTTCGTCCATGGATTCT 300
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      ------------------------------------------------------------
                                                                                   

consensus_11690#0      ATGGGATGGCCGGAACGATAAACCTGTACAGCATTGGCCTGAATTACGCGTCGGCCACCT 360
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      ------------------------------------------------------------
                                                                                   

consensus_11690#0      CGTCGTCGGCCATCTTCAACATCGTGCCGGTGGTCGCCTTCATCTTGGCTGTCATGTTCA 420
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      ------------------------------------------------------------
                                                                                   

consensus_11690#0      GGATGGAGACTCTGAACCTGAAGAGCACCCATGGCATGGCGAAAGCATCGGGGATACTCC 480
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      -----------------------------------------------------CTCCTTC 7
                                                                                   

consensus_11690#0      TCTGCATCGGCGGCG--TCATCGTGCTGGCTCTGTACCAAGGCCCGGAGTTCAAGTCCTT 538
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      CCCAACTTGCCTCCAATTCCAAGTTCCAACCCTCCACCTCCCTATATAACACAGCTCTTC 67
                                                                                   

consensus_11690#0      GAACCACCACCAGCTCCTCCACCATGCGAGCGCCGCCGCCGCCGCCGCGGCGCATTCCAA 598
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      CCACC-CCGTCAAATCCCACGACTCAAAACCACCAAAACTCACCAAGCAAAGCA--CCAG 124
                                                                                   

consensus_11690#0      GAAGAACTGGGCGCTGGGGATCTTCCTGATGACCACCTCCGTCGTGATATGGTCGTTCTG 658
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      CGAGGAAGAACAAGAAGGAAGGTGAAGAGAAGCCGCGTTTTGTTTCTCGCGAAAGTGTTT 184
                                                                                   

consensus_11690#0      GACGGTGAAGCAGGGGCCGTTGCTGCTGGAGTACCCGTCGAAGC-TGATGAACACGACGC 717
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      GTTGATATGGCGATGGAGGGGAAGAGCAGGAGGTTCGCGGTGGCGTGCGGGGTGCTCAGC 244
                                                                                   

consensus_11690#0      TGCAGTGCGTGTTCGCGAGCGTGCAGTCGCTGGTGATCGCGCTCGTCCTCGAGAGGGACT 777
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      CAGTACGTGAGGGCGGACAGAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGGGCGG 304
                                                                                   

consensus_11690#0      TCTCCCGGTGGATCCTCCCCGGCGTCGTCAGCCTCGTCGGCGTCCTCTTCACCGGCATCG 837
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      TGACGACGCTGAGCCTGATGCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGGAGGG 364
                                                                                   

consensus_11690#0      TGGTGGCGGCGATCTCGTACTACCTGCAGATATGGGTGATCGAGAAGAAGGGCCCCGTGT 897
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      AGGTTGGGGAGGAGGAGGCGGGGCCAGCGACGGCGCCGGCCGCGCCGCTGA---CCATCT 421
                                                                                   

consensus_11690#0      TCCTGTCCATGTCGATGCCGCTCAGCCTCGTCTTCACCATGGCCATCGCCTCGTTCCTGC 957
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      TCTACGGTGGGAGGATGGTCGTCTTCGAGGACTTCCCCGCGGACAAGGCGGCGGAGGTGA 481
                                                                                   

consensus_11690#0      TCGGCGAGGACGTCAGCCTAGGAAGCATTATCGGCAGC-CTGCTGCTCGTCGCCGGCCTC 1016
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      TGCGCATGG-CCTCCTCCGGGATGGCGGCGGCGCCGGCTCAGCGGGAGGGCGCCGCGCTC 540
                                                                                   

consensus_11690#0      TACAACGTGCTATGGGGCAAGAGCCGGGAGGAACACGGCGGCGGCGGCGTCGTCGTTGCC 1076
consensus_11690#2      ------------------------------------------------------------
consensus_11690#1      GCGGACATGCCCATCATGAGGAAGGCGTCGCTGCAGCGGTTCTTCGCCAAGCGCAAGGAC 600
                                                                                   

consensus_11690#0      GGCGCTGGCACCGCCGGCGGGGAGAAGGATGGCGCGGTGGCTCCCGCCGCAGCCGACGTG 1136
consensus_11690#2      ------AGTGGGACAAAAAAGAACAGGCACAAGGTGTTTCCCATCAATTCAATCTCCCTA 54
consensus_11690#1      CGCCTCGCGGCGACCACCCCCTACGCCCGCCCGTCGCCGGCGGAGACCAAGGCCTCCGAG 660
                                    *        *            *    *            *  *   

consensus_11690#0      GTGA--TGGCCAAAGTTTGACCGA-CACGGTGGTGCACCACGTGTCGCGGCGGCGTGGAA 1193
consensus_11690#2      TCGAATTTTACAAAGAAGTATAGC-AAAAGCGGTAAA---AACTCTACGTCGCCATGGGT 110
consensus_11690#1      CCGGAGGAGAAGAAGACGCCCACCTCATGGCTGGACCTCGCCGCCTCCGCCTCCGCCGCC 720
                         *         ***           *  *  *              ** *  *   *  

consensus_11690#0      GCGATCGGAAAGAGCGAAGCTACAAGTACAAAG-GATGGGGGTGGTGATGACCGGTGAAT 1252
consensus_11690#2      ATGAGCAAAGTGAATCAATCCTCTTGCGCGCTG-AGAGCGCGCGCGCGTCTCAAGTCGTT 169
consensus_11690#1      GCGCGCCGTGACAGCC---TCACCATCGCGCTGTGATCTGCGCGGCTTTGACCAAAAACG 777
                         *  *      *         *     *   *      * * *    *  *        

consensus_11690#0      CTCGAATATCTTTTGCGGTGGCCGGGGCACG--GGCGAC-CGGTGGTGGTGCGGCGGCGG 1309
consensus_11690#2      TTTGGTCAAAGCC-GCGCAGATCACAGCGCGATGGTGAGGCTGTCACGGCGCG-CGGCGG 227
consensus_11690#1      ACTTAAGACGCGC-GCGC-GCTCTCAGCGCGCAAGAGGA-TTGATTCACTTTGCTCATAC 834
                              *      ***  *  *   ** **   * *     *         *       

consensus_11690#0      CGGCGGCGGCAGAAAGGGTTAGGCTAGGCAAGCTAGACTACCCGGTGAAGTGGTGTACTC 1369
consensus_11690#2      CGGAGGCGGCAGAAAGGGTTAGGCTAGGCAAGCTAGACTACCCGGTGAAGTGGTGTACTC 287
consensus_11690#1      CCATGGCGAC-GTAGAGTTTTTACCGCTTTTGCTATACTTCTTTGTAAAATTCGATAGGG 893
                       *   **** * * *  * **   *       **** *** *   ** ** *    **   

consensus_11690#0      AGCTCGTGTCAACTGATAAATCTTTGTACTATTATTCCTGTTTTTTTTTAATACTAGTAT 1429
consensus_11690#2      AGCTCGTGTCAACTGATAAATCTTTGTACTATTATTCCGGTTTTTTTTTAATACTAGTAT 347
consensus_11690#1      AGATTGAATTGATGGGAAACCCCTTGTGC--CTGTTC----TTTTTTGTCCCACT-GTAT 946
                       ** * *  *  *  *  **  * **** *   * ***    ****** *   *** ****

consensus_11690#0      AAGACACATGTGCTT-TGCAACTGG-----ATTTTTCACATTTTGGTCCTTTTAAAA--- 1480
consensus_11690#2      AAGACACATGTGCTT-TGCAACGGACCAAAGTTGGCTAGATGAGTGTGCTTATCAATGGA 406
consensus_11690#1      CAAATATTCTTTCCTGTGCAAATTAAGCCAACTTTTTAGTTGTTACCTCAACAAAAAAAA 1006
                        * * *    * * * *****           *    *  *       *     **    

consensus_11690#0      -----------------------------------------------------
consensus_11690#2      GCCAGGCCCACATATGATCGGGGATTGGCCGGGTGGGTGAATTATAAAAAAAA 459
consensus_11690#1      -----------------------------------------------------
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)