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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11693#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 716 fasta sequence
[TTCGGATTTGTGAGGAAGAAGATTTTGTTCTGCAGGTTTTTGATGGAGCAGAAACTCTCCGGTTGGAAAGGGCAGAATGTCGTCGGCGAGGTCTGTTGCGTCGCCTTCCGCGGTGCGAGTAGGCGGAGTCTCGTCGGCGCCTGATGTCGAGCAGCAGAAGTCGGTGGCGGCCGTAGGCGCA-TCGTCGCCGGTGAGTAGTAGCAAGCACCATCATATGGCGAAGGC-AGAAGATGGAACCATTACAGTT-AATGGTGAC-AAGCAGCATAATCC-TGCCGCAGA----T-A-GGAATGGTTTTGTG-CGTTGCATGGATACTGCTGCCCGGAGTGAAGTGATGAACCACTCTCTCCAGAAATATGTCATTCATTTCGA-TGGATGTC-ATCCTCTTCCCATGA-GAAATCCTAGGAAGAGATGCGCTTGGT-GCTCACTCCGTGATATT-CGCGTGGCTTGCGACATGAATTTCAGAAGCAACGAAACAACCCGGGTCAACAGTAATGGTTGCGAACATGTGTCCAATGAAAATATGTAGACAATAGTGTGATGATCAGGAAAATTGTAATAAGGGCTTGCTTTCTGCACGGTCGTAGATTAGTCGTACGAACTGTCTCTAGTTTTGTATGGTATTTTCTATGAGGAAAAAGCGAGTAGTATCTAAGTTTAGAAATCTGTATCTTCTACTGTTTGGGAAGTGAAATAAAATTGAGATGTTATCCTTTCAAAAA]
[+] EMBL AU076163 [TTCGGATTTGTGAGGAAGAAGATTTTGTTCTGCAGGTTTTTGATGGAGCAGAAACTCTCCGGTTGGAAAGGGCAGAATGTCGTCGGCGAGGTCTGTTGCGTCGCCTTCCGCGGTGCGAGTAGGCGGAGTCTCGTCGGCGCCTGATGTCGAGCAGCAGAAGTCGGTGGCGGCCGTA ACGCANTCGTCGCCGGTGAGTAGTAGCAAGCACCATCATATGGCGAAGGC AGAAGATGGAACCATTACAGTT AATGGTGAC AAGCAGCATAATCC TGCCGCAGA T A GGAATGGTTTTGTG CGTTGCATGGATACTGCTGCCCGGAGTGAAGTGATGAACCACTCTCTCCAGAAATATGTCATTCATTTCGA TGGATGTC ATCCTCTTCCCATGA GAAATCCTAGGAAGAGATGCG ]
[+] EMBL AU064979 [TTCGGATTTGTGAGGNAGAAGATTTTGTTCTGCAGGTTTTTGATGGAGCAGAAACTCTCCGGTTGGAAAGGGCAGAATGTCGTCGGCGAGGTCTGTTGCGTCGCCTTCCGCGGTGCGAGTAGGCGGAGTCTCGTCGGCGCCTGATGTCGAGCAGCAGAAGTCGGTGGCGGCCGTANGC AN TCGTCGCCGGTGAGTAGTAGCAAGCACCATCATATGGCGAAGGC AGAAGATGGAACCATTACAGTT AATGGTGAC AAGCAGCATAATCC TGCCGCAGA T A GGAATGGTTTTGTG CGTTGCATGGATACTGCTGCCCGGAGTGAAGTGATGAACCACTCTCTCCAGAAATATGTCATTCATTTCGA TGGATGTC ATCCTCTTC ]
[+] EMBL AU064725 [TTCGGATTTGTGAGGAAGAAGATTTTGTTCTGCAGGTTTTTGATGGAGCAGAAACTCTCCGGTTGGAAAGGGCAGAATGTCGTCGGCGAGGTCTGTTGCGTCGCCTTCCGCGGTGCGAGTAGGCGGAGTCTCGTCGGCGCCTGATGTCGAGCAGCAGAAGTCGGTGGCGGCCGTAGGC AA TCGTCGCCGGTGAGTAGTAGCAAGCACCATCATATGGCGAAGGCAAGAAGATGGGACCATTACAGTTAAATGGTGACAAAGCAGCATAATCCTTNCCG AAA TAA GGAATGGTTTTTTGCCGTTCAATNGAT ]
[+] EMBL AU065014 [TTCGGATTTGTGAGGAAGAAGATTTTGTTCTGCAGGTTTTTNATGGAGCAGAAACTCTCCGGTTGGAAAGGGCAGAATGTCGTCGGCGAGGTCTGTTGCGTCGCCTTCCGCGGTGCGAGTAGGCGGAGTCTCGTCGGCGCCTGATGTCGAGCAGCAGAAGTCGGTGGCGGCCGTA GCGCATTCGTCGCCGGTGAGTAGTAGCAAGCACCATCATATGGCGAAGGC AGAAGATGGAACCATTACAGTT AATGGTGAC AAGCAGCATAATCC TGCCGCAGA T A GGAATGGTTTTGTG CGTTGCATGGATACTGCTTCCCGGAGTGAAGTGATGAACCACTCTCTCCAGAAATATGTCATTCATTTCGATTGGATGTCAATCCTCTTCCCATGAGGAAATCCTAGGAAGAGATGCGCTTTGG GCTCACTCCG GATATTCCGCGTGGCTT ]
[+] EMBL AU064152 [TTCGGATTTGTGAGGAAGAAGATTTTGTNCTGCAGGTTTTTNATGGAGCAGAAACTCTCCGGTTGGAAAGGGCAGAATGTCGTCGGCGAGGTCTGTTGCGTCGCCTTCCGCGGTGCGAGTAGGCGGAGTCTCGTCGGCGCCTGATGTCGAGCAGCAGAAGTCGGTGGCGGCCGTAGGC AN TCGTCGCCGGTNAGTAGTAGCAAGCACCATCATATGGCGAAGGC AGAAGATGGAACCATTACAGTT AATGGTGAC AAGCAGCATAATCC TGCCGCAGA T A GGAATGGTTTTGTG CGTTGCATGGATACTGCTGCCCGGAGTGAAGTGATGAACCACTCTCTCCAGAAATATGTCATTCATTTCGA TGGATGTC ATCCTCTTCCCATGA GAAATCCTAGGAAGAGATGCG TTNGT GCTCACTCCGTGATATT CGCGTGGCTT ]
[+] EMBL AU077676 [ TTTTGTTCTGCAGGTTTTTGATGGAGCAGAAACTCTCCGGTTGGAAAGGNCAGAATGTCGTCGGCGAGGTCTGTTGCGTCGCCTTCCGCGGTGCGAGTAGGCGGAGTCTCGTCGGCGCCTGATGTCGAGCAGCAGAAGTCGGTGGCGGCCGTAGGCGCA TCGTCGCCGGTGAGTAGTAGCAAGCACCATCATATGGCGAAGGC AGAAGATGGAACCATTACAGTT AATGGTGAC AAGCAGCATAATCC TGCCGCAGA T A GGAATGGTTTTGTG CGTTGCATGGATACTGCTGCCCGGAGTGAAGTGATGAACCACTCTCTCCAGAAATATGTCATTCATTTCGA TGGATGTC ATCCTCTTCCCATGA GAAATCCTAGGAAGAGATGCGCTTGGTGGCTCACTCCGTGATATT CGCGTGGCTTGCGACATGAATTTCAGAAGCAACGAAACAACCCGGGTCAACAGTAATGGTTGCGAACATGTGTCCAATGAAAATATGTAGACAATAGTGTGATGATCAGGAAAATTGTAATAAGGGCTTGCTTTCTGCACGGTCGTAGATTAGTCGTACGAACTGTCTCTAGTTTTGTATGGTATTTTCTATGAGGAAAAAGCGAGTAGTATCTAAGTTTAGAAATCTGTATCTTCTACTGTTTGGGAAGTGAAATAAAATTGAGATGTTATCCTTTCAAAAA]
[+] EMBL AU101259 [ aanCAG AACTCTCCGGTTGNAAAGGGCAGAATGTCGTCGGCNAGGTCTGTTGCGTCGCCTTCCGCGGTGCGAGTAGCCGGAGTCTCGTCGGCGCCTGATGTCGAGCAGCAGAAGTCGGTGNCGGCCGTAGGCGCA TCGTCGCCGGTGAGTAGTAGCAAGCACCATCATATGGCGAAGGC AGAAGATGGAACCATTACAGTT AATGGTGAC AAGCAGCATAATCC TGCCGCAGA T A GGAATGGTTTTGTG CGTTGCATGGATACTGCTGCCCGGAGTGAAGTGATGAACCACTCTCTCCAGAAATATGTCATTCATTTCGA TGGATGTC ATCCTCTTCCCATGA GAAATCCTAGGAAGAGATGCGCTTGGT GCTCACTCCGTGATATT CGCGTGGCTTGCGACATGAATTTCAGAAGCAACGAAACAACCCGGGTCAACAGTAATGGTTGCGAACATGTGTCCAATGAAAATATGTAGACAATAGTGTGATGATCAGGAAAATTGTAATAAGGGCTTGCTTTCTGCACGGTCGTAGATTAGTCGTACGAACTGTCTCTAGTTTTGTATGGTATTTTCTATGAGGAAAAAGCGAGTAGTATCTAAGTTTAGAAATCTGTATCTTCTACTGTTTGGGAAGTGAAATAAAATTGAGATGTTATCCTTTCAAAAA]
[+] EMBL AU076164 [ A TCGTCGCCGGTGAGTAGTAGCAAGCACCATCATATGGCGAAGGC AGAAGATGGAACCATTACAGTT ATGGTGAC AGC GCAT ATCC TGCC CAAANTTTT AGGGAATGGTTTTGTG CGTTGCATGGATACTGCTGCCCGGAGTGAAGTGATGAACCACTCTCTCCAGAAATATGTCATTCATTTCGA TGGATGTC ATCCTCTNCCCATGA GAAANCCTAGGAAGAGATGCGCTTGGT GCTCACTCCGTGATATT CGCGTGGCTTGCGACATGAATTTCAGAAGCAACGAAACAACCCGGGTCAACAGTAATGGTTGCGAACATGTGTCCAATGAAAATATGTAGACAATAGTGTGATGATCAGGAAAATTGTAATAAGGGCTTGCTTTCTGCACGGTCGTAGATTAGTCGTACGAACTGTCTCTAGTTTTGTATGGTATTTTCTATGAGGAAAAAGCGAGTAGTATCTAAGTTTAGAAATCTGTATCTTCTACTGTTTGGGAAGTGAAATAAAATTGAGATGTTATCCTTTCAAAAA]
[+] EMBL AU222609 [ TTTTGTG CGTTGCATGGATACTGCTGCCCGGAGTGAAGTGATGAACCNCTCTCTCCAGAAATATGTCATTCATTTCGA TGGATGTC ATCCTCTTCCCATGA GAAATCCTAGGAANAGATGCGCTTGGT GCTCNCTCCGTGATATT CGCGTGGCTTGCGACATGAATTTCAGAAGCAACGAAACAACCCGGGTCAACAGTAATGGTTGCGAACATGTGTCCAATGAAAATATGTAGACAATAGTGTGATGATCAGGAAAATTGTAATAAGGGCTTGCTTTNTGCNCGGTCGTAGATTAGTCGTACGAACTGTCTCTAGTTTTGTATGGTATTTTCTATGAGGAAAAAGCGAGTAGTATCTAAGTTTAGAAATCTGTATCTTCTACTGTTTGGGAAGTGAAATAAAATTGAGATGTTATCCTTTCAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||