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Oryza sativa
cluster # 11712 cluster # 11712       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11712#0 length = 1913 sequences # 3  
consensus_11712#1 length = 911 sequences # 6  

consensusID : consensus_11712#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1913
fasta sequence
                              [CTCTCTTGGCGTGCTCCTGCTCAGCTGAGCTCGGGTGAGCTCTTTCTACCTCCAAGATTTCCTCCTCCTACCTCCACTCCACTCGCCTCACCTCAGCTCACCTCAGCGTCGTCTTCTTCCTTCCGCAACCTCGCAGGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGTGGTGGAGGCCATGGCGGAGGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGGGCACGCGTCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGACCAAGTTCTTGGAAGACCACCCTGGTGGAGAGGATGTTCTCCTGCATGCATCTGGTCAGATGAGATTCAGATTCCTCCATTCCTATCAACTGTAATGATAATGTTTGATGCTAAAGCTGTGATGCTATTGAAACTATTTACGACCTTATCTGCTCATCAATTTAATTGTGATGATAAATGCTCGGATTCGTTGCTGTCAGTTAATTTTCTTCATTTTTGGTGGTCAGTTCAAGCCTGCAGTAGTAGAATTAGATTGGTTCATGTTGTTTAGTTAAGAGAAACCAATTGTATCATGCTGCTCTGATCTGAATAGATGGTTGTGTTCAACACCTAGTCAACTGCCATTAGCAATTTATCATAAATCAGCCCGTACGGTATTTGCTTTTGTAATGCAGCCAGTGGGCATCGATGCTGATTCATGATTTGTACCACCAGCTTCTGTTAACCTTGTATTGTGCCACGTGGAAGCCTCATAACCATAGGCATATTCAACTCCTGTTGTTCTAATTGTCTAAGAGAATTAACAAAATTAAAATCATGATAGAGCCGCTTGTTGCTTAATTCTTGCAAATATCTTGCCTTCTAAGTCATGGAATAACATGCATTTTACATCATGAAAATTCTCAGTTATTCATTACCAAACCAATATAATGATGGCTTGCTACTGTTTTCTTGGGAGACAAAACAATGCCAGGGCAATTTTAGTTTCAATATTTCTAAATACCGTACGGTCTGATTAATTTATGATAAATATGTTGTCCCAGCAGAGACCAATGCATAGAAGTTAATGCTTTTTTTACTTTTCGGATGTTGCTTTCCTCTGGACTAAATTTCTGAGCCTCACTAATCACACTAAATTTGCTATTGCAAATGTTCCCCTTGTATTGTACTGATTCCATTGTACTTGTTCCGTTTAATTGCACATGCTATGTTGATATATTACTTTAACTAGATGACAAAAATAAAATGTTAACATATGGTGCGGTTCTGAAAGAAAGACATTTGGAATAGATGCAAGGTTTATTGACAAGTTTCTATTTTCTGTTGCCTCTGTATTTAATCAATTCTTGAAGCCTCTGGGGATGCCACGGAGGCATTTGAAGATGTGGGGCACAGCACATCAGCCATCAGCATGATGAACAACTACTTGATTGGAAGCATCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCATTGGCGGCAATGATGTGCCGCCAAACTTCAGAAGGATGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTACCTGACCTTCATTGCCAAGGCCTAGTAAATTTGGTGAAGGTTTGAAGTATTGAACATTTTACTATGCCACGTCTGCTTCAGCG-ACACATGGAGATATATTCTGGTCAGTTCTAAGTTTTATTATAAGGTTTAAGGCTGTGAATTAGAAATGTCATCGTATTATTATTTGTTACCAAATTGTTGGCTTTGCTTCGAAGTTGGTACCACTCTTACATGTAAATGGCGATGGCTGCATCAGTAAAATGTATGGATGGGGCATTTTCCTTTTCGCTATCAAAAAAAAAA]

[+] EMBL AK073017             [CTCTCTTGGCGTGCTCCTGCTCAGCTGAGCTCGGGTGAGCTCTTTCTACCTCCAAGATTTCCTCCTCCTACCTCCACTCCACTCGCCTCACCTCAGCTCACCTCAGCGTCGTCTTCTTCCTTCCGCAACCTCGCAGGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGTGGTGGAGGCCATGGCGGAGGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGGGCACGCGTCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGACCAAGTTCTTGGAAGACCACCCTGGTGGAGAGGATGTTCTCCTGCATGCATCTGGTCAGATGAGATTCAGATTCCTCCATTCCTATCAACTGTAATGATAATGTTTGATGCTAAAGCTGTGATGCTATTGAAACTATTTACGACCTTATCTGCTCATCAATTTAATTGTGATGATAAATGCTCGGATTCGTTGCTGTCAGTTAATTTTCTTCATTTTTGGTGGTCAGTTCAAGCCTGCAGTAGTAGAATTAGATTGGTTCATGTTGTTTAGTTAAGAGAAACCAATTGTATCATGCTGCTCTGATCTGAATAGATGGTTGTGTTCAACACCTAGTCAACTGCCATTAGCAATTTATCATAAATCAGCCCGTACGGTATTTGCTTTTGTAATGCAGCCAGTGGGCATCGATGCTGATTCATGATTTGTACCACCAGCTTCTGTTAACCTTGTATTGTGCCACGTGGAAGCCTCATAACCATAGGCATATTCAACTCCTGTTGTTCTAATTGTCTAAGAGAATTAACAAAATTAAAATCATGATAGAGCCGCTTGTTGCTTAATTCTTGCAAATATCTTGCCTTCTAAGTCATGGAATAACATGCATTTTACATCATGAAAATTCTCAGTTATTCATTACCAAACCAATATAATGATGGCTTGCTACTGTTTTCTTGGGAGACAAAACAATGCCAGGGCAATTTTAGTTTCAATATTTCTAAATACCGTACGGTCTGATTAATTTATGATAAATATGTTGTCCCAGCAGAGACCAATGCATAGAAGTTAATGCTTTTTTTACTTTTCGGATGTTGCTTTCCTCTGGACTAAATTTCTGAGCCTCACTAATCACACTAAATTTGCTATTGCAAATGTTCCCCTTGTATTGTACTGATTCCATTGTACTTGTTCCGTTTAATTGCACATGCTATGTTGATATATTACTTTAACTAGATGACAAAAATAAAATGTTAACATATGGTGCGGTTCTGAAAGAAAGACATTTGGAATAGATGCAAGGTTTATTGACAAGTTTCTATTTTCTGTTGCCTCTGTATTTAATCAATTCTTGAAGCCTCTGGGGATGCCACGGAGGCATTTGAAGATGTGGGGCACAGCACATCAGCCATCAGCATGATGAACAACTACTTGATTGGAAGCATCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCATTGGCGGCAATGATGTGCCGCCAAACTTCAGAAGGATGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTACCTGACCTTCATTGCCAAGGCCTAGTAAATTTGGTGAAGGTTTGAAGTATTGAACATTTTACTATGCCACGTCTGCTTCAGCG ACACATGGAGATATATTCTGGTCAGTTCTAAGTTTTATTATGAGGTTTCTGGCTGTGAATTAGAAATGTCATCGTATTATTATTTGTTACCAAATTGTTGGCTTTGCTTCGAAGTTGGTACCACTCTTACATGTAAATGGCGATGGCTGCATCAGTAAAATGTATGGATGGGGCATTTT                       ]
[-] EMBL CF281573             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCACATCAGCCATCAGCATGATGAACAACTACTTGATTGGAAGCATCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCATTGGCGGCAATGATGTGCCGCCAAACTTCAGAAGGATGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTACCTGACCTTCATTGCCAAGGCCTAGTAAATTTGGTGAAGGTTTGAAGTATTGAACATTTTACTATGCCACGTCTGCTTCAACGAACCCA GGAGATATATTCTGGTCAGTTCTAAGTTTTATTATAAAAAAAAAGGCTGTGAATTAGAAATGTCATCGTATTATTATTTGTTACCAAATTGTTGGCTTTGCTTCGAAGTTGGTACCACTCTTACATGTAAATGGCGATGGCTGCATCAGTAAAATGTATGGATGGGGCATTTTCCTTTTCGCTATCAAAAAAAAAA]
[-] EMBL CF297604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gtATGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTTTGGAGTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTATTACCTGACCTTCATTGCCAAGGCCTAGTAAATTTGGTGAAGGTTTGAAGTATTGAACATTTTTCTATGCCATGTCTGTTTCAGCG ACACATGGAGATATATTTTGGTCAGTTTTAAGTTTTCTTATAAGGTTTAAGCCTGT                                                                                                                                                  ]


>consensus_11712#0 CTCTCTTGGCGTGCTCCTGCTCAGCTGAGCTCGGGTGAGCTCTTTCTACCTCCAAGATTT CCTCCTCCTACCTCCACTCCACTCGCCTCACCTCAGCTCACCTCAGCGTCGTCTTCTTCC TTCCGCAACCTCGCAGGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGTGGTGGAGGC CATGGCGGAGGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGG GCACGCGTCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGACCAA GTTCTTGGAAGACCACCCTGGTGGAGAGGATGTTCTCCTGCATGCATCTGGTCAGATGAG ATTCAGATTCCTCCATTCCTATCAACTGTAATGATAATGTTTGATGCTAAAGCTGTGATG CTATTGAAACTATTTACGACCTTATCTGCTCATCAATTTAATTGTGATGATAAATGCTCG GATTCGTTGCTGTCAGTTAATTTTCTTCATTTTTGGTGGTCAGTTCAAGCCTGCAGTAGT AGAATTAGATTGGTTCATGTTGTTTAGTTAAGAGAAACCAATTGTATCATGCTGCTCTGA TCTGAATAGATGGTTGTGTTCAACACCTAGTCAACTGCCATTAGCAATTTATCATAAATC AGCCCGTACGGTATTTGCTTTTGTAATGCAGCCAGTGGGCATCGATGCTGATTCATGATT TGTACCACCAGCTTCTGTTAACCTTGTATTGTGCCACGTGGAAGCCTCATAACCATAGGC ATATTCAACTCCTGTTGTTCTAATTGTCTAAGAGAATTAACAAAATTAAAATCATGATAG AGCCGCTTGTTGCTTAATTCTTGCAAATATCTTGCCTTCTAAGTCATGGAATAACATGCA TTTTACATCATGAAAATTCTCAGTTATTCATTACCAAACCAATATAATGATGGCTTGCTA CTGTTTTCTTGGGAGACAAAACAATGCCAGGGCAATTTTAGTTTCAATATTTCTAAATAC CGTACGGTCTGATTAATTTATGATAAATATGTTGTCCCAGCAGAGACCAATGCATAGAAG TTAATGCTTTTTTTACTTTTCGGATGTTGCTTTCCTCTGGACTAAATTTCTGAGCCTCAC TAATCACACTAAATTTGCTATTGCAAATGTTCCCCTTGTATTGTACTGATTCCATTGTAC TTGTTCCGTTTAATTGCACATGCTATGTTGATATATTACTTTAACTAGATGACAAAAATA AAATGTTAACATATGGTGCGGTTCTGAAAGAAAGACATTTGGAATAGATGCAAGGTTTAT TGACAAGTTTCTATTTTCTGTTGCCTCTGTATTTAATCAATTCTTGAAGCCTCTGGGGAT GCCACGGAGGCATTTGAAGATGTGGGGCACAGCACATCAGCCATCAGCATGATGAACAAC TACTTGATTGGAAGCATCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCATT GGCGGCAATGATGTGCCGCCAAACTTCAGAAGGATGCCACAGAAGAAAGGACCTCCTGCT CCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCT TGGTACTACCTGACCTTCATTGCCAAGGCCTAGTAAATTTGGTGAAGGTTTGAAGTATTG AACATTTTACTATGCCACGTCTGCTTCAGCGACACATGGAGATATATTCTGGTCAGTTCT AAGTTTTATTATAAGGTTTAAGGCTGTGAATTAGAAATGTCATCGTATTATTATTTGTTA CCAAATTGTTGGCTTTGCTTCGAAGTTGGTACCACTCTTACATGTAAATGGCGATGGCTG CATCAGTAAAATGTATGGATGGGGCATTTTCCTTTTCGCTATCAAAAAAAAAA



consensusID : consensus_11712#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 911
fasta sequence
                              [ACCACCACACACCTGAGCTTCAGCTCCAGCGGCGGCTCTCTTGGCGTGCTCCTGCTCAGCTGAGCTCGGGTGAGCTCTTTCTACCTCCAAGATTTCCTCCTCCTACCTCCACTCCACTCGCCTCACCTCAGC-TCACCT-CAGCGTCGTCT-TCTT--CCT--TCC-GC-AACCT---CGCAGGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGT-GGTGG-AGGCCATGGCGGA-GGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGGGCACGCGTCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGACCAAGTTCTTGGAAGACCACCCTG-GT-GGAG-AGG-ATGTTCT-CCTGCATGCATCT-GCCTCTGGGGATG-CCACGGAGGCATTTGAAGA-TGTGGGGCACAGCACATCAG-CCATCAGCATGATG-AACAACTACTTGATTGGAAGCA-TCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCA--TTGGCGGC-AATGATGTGCCG-CCAAACTTCAGAAGGA-TGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTACCT-GACCTTCATTGCCAAGGCCTAGTAAATTT-GGTGAAGGTTTGAAGTATTGAACATTTTACTATGCCACGTCTGCTTCAGCGACACATGGAGATATATTCTGGTCAGTTCTAAGTTTTATTATGAGGTTTCTGGCTGTGAATTAGAAATGTCATCGTATTATTATTTGTTACCAAATTG-TTGGC-TTTGCTTCGAAGTTGGTACCACTCTTACATGTAAATGGCGATGGCTGCATCAGTAAAATGTATGGATGGGGCATTTTAAAAA]

[+] EMBL CF281572             [ACCACCACACACCTGAGCTTCAGCTCCAGCGGCGGCTCTCTTGGCGTGCTCCTGCTCAGCTGAGCTCGGGTGAGCTCTTTCTACCTCCAAGATTTCCTCCTCCTACCTCCACTCCACTCGCCTCACCTCAGC TCACCT CAGCGTCGTCT TCTT  CCT  TCC GC AACCT   CGCAGGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGTGGGTGG AGGCCATGGCGGAGGGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGGGCACGCGTCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGACCAAGTTCTTGGAAGACCACCCTG G  GGAGNAGG ATGTTCT CCTGCATGCATCT GCCTCTGGGGATG CCACGGAGGCATTTGAAGA TGTGGGGCACAGCACATCAG CCATCAGCATGATG AACAACTACTTGATTGGAAGCA TCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCT CAACCATTTTGGCGGCAAATGATGTGCCG CCAAACTTCAGAAGGA TGCCACAGAAGAAAGGACCTCCTGCTCCC ACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTACCT                                                                                                                                                                                                                                                                            ]
[+] EMBL AK060133             [        ACACCTGAGCTTCAGCTCCAGCGGCGGCTCTCTTGGCGTGCTCCTGCTCAGCTGAGCTCGGGTGAGCTCTTTCTACCTCCAAGATTTCCTCCTCCTACCTCCACTCCACTCGCCTCACCTCAGC TCACCT CAGCGTCGTCT TCTT  CCT  TCC GC AACCT   CGCAGGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGT GGTGG AGGCCATGGCGGA GGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGGGCACGCGTCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGACCAAGTTCTTGGAAGACCACCCTG GT GGAG AGG ATGTTCT CCTGCATGCATCT GCCTCTGGGGATG CCACGGAGGCATTTGAAGA TGTGGGGCACAGCACATCAG CCATCAGCATGATG AACAACTACTTGATTGGAAGCA TCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCA  TTGGCGGC AATGATGTGCCG CCAAACTTCAGAAGGA TGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTACCT GACCTTCATTGCCAAGGCCTAGTAAATTT GGTGAAGGTTTGAAGTATTGAACATTTTACTATGCCACGTCTGCTTCAGCGACACATGGAGATATATTCTGGTCAGTTCTAAGTTTTATTATGAGGTTTCTGGCTGTGAATTAGAAATGTCATCGTATTATTATTTGTTACCAAATTG TTGGC TTTGCTTCGAAGTTGGTACCACTCTTACATGTAAATGGCGATGGCTGCATCAGTAAAATGTATGGATGGGGCATTTT     ]
[+] EMBL CF297605             [                                                                 TCGGGTGAGCTCTTTCTACCTCCAAGATTTCCTCCTCCTACCTGCACTCCACTCGCCTCACCTCAGC TCACCT CAGCGTCGTCT TCTT  CCT  TCC GC AACCT   CGCAGGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGT GGTGGTAGGCCATGGCGGA GGATGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF315935             [                                                                                                                  accaccacaCACCTGAGCTTCAGCTCCAGCGGCGGCTCTCTTGGCGTGCTCCTGCTCAGCTGAGCTCGGGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGT GGTGG AGGCCATGGCGGA GGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGGGCACGCGTCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGACCAAGTTCTTGGAAGACCACCCTG GT GGAG AGG ATGTTCT CCTGCATGCATCT GCCTCTGGGGATG CCACGGAGGCATTTGAAGA TGTGGGGCACAGCACATCAG CCATCAGCATGATG AACAACTACTTGATTGGAAGCA TCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCAT TTGGCGGC AATGATGTGCCG CCAAACTTCAGAAGGA TGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTACCT GACCTTCATTGCCAAGGCCTAGTAAATTT GGTGAAGGTTTGAAGTATTGAACATTTTACTATGCCACGTCTGCTTCAGCGACACATGGAGATATATTCTGGTCAGTTCTAA                                                                                                                                                           ]
[+] EMBL AU031260             [                                                                                                                                                                          gagCT   CG  GGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGT GGTGG AGGCCATGGCGGA GGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGGGCACGCGTCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGACCAAGTTCTTGGAAGACCACCCTG GT GGAG AGG ATGTTCT CCTGCATGCATCT GCCTCTGGGGATG CCACGGAGGCATTTGAAGA TGTGGGGCACAGCACATCAG CCATCAGCATGATG AACAACTACTTGATTGGAAGCA TCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCA  TTGGCGGC AATGATGTGCCG CCAAACTTCAGAAGGA TGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTCTGGANTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTANCTGGACCTTCATTGCCAAGGCCTAGTAAATTTGGGTGAAGGTTTGAAGTATTGAACATTTTACTATGCCACGTCTGCTTCAGCGACACATGGAGATATATTCTGGTCAGTTCTAAGTTTTATTATGAGGTTTCTGGCTGTGAATTAGAAATGTCATCGNATTATTATTTGTTACCAAATTGTTTGGCTTTTGCTTC                                                                          ]
[+] EMBL AU031259             [                                                                                                                                                                                                                                                                                                                                                            AAGTTCTTGGAAGACCACCCTGNGTGGGAG AGGAATGTTCTCCCTGCATGCATCTGGCCTCTGGGGATGCCCACGGAGGCATTTGAAGANTGTGGGGCACAGCACATCAGCCCATCAGCATGATGAAACAACTACTTGATTGGAAGCATTNAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCA  TTGNCGGC AATGATGTGCCGCCCAAACTTCAGAAGGATTGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTACCT GACCTTCATTGCCAAGGCCTAGTAAATTT GGTGAAGGTTTGAAGTATTGAACATTTTACTATGCCACGTCTGCTTCAGCGACACATGGAGATATATTCTGGTCAGTTCTAAGTTTTATTATGAGGTTTCTGGCTGTGAATTAGAAATGTCATCGTATTATTATTTGTTACCAAATTG TTGGC TTTGCTTCGAAGTTGGTACCACTCTTACATGTAAATGGCGATGGCTGCATCAGTAAAATGTATGGATGGGGCAAAAAAAAAA]


>consensus_11712#1 ACCACCACACACCTGAGCTTCAGCTCCAGCGGCGGCTCTCTTGGCGTGCTCCTGCTCAGC TGAGCTCGGGTGAGCTCTTTCTACCTCCAAGATTTCCTCCTCCTACCTCCACTCCACTCG CCTCACCTCAGCTCACCTCAGCGTCGTCTTCTTCCTTCCGCAACCTCGCAGGTTGAACCG GAGAGCGGGAGGAGCGAGTGAGTGGTGGTGGAGGCCATGGCGGAGGATGAGGCGGCCAGC GCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGGGCACGCGTCCAGGAAGGATTGCTGG GTCGTCATCCATGGCAAGGTGTATGATGTGACCAAGTTCTTGGAAGACCACCCTGGTGGA GAGGATGTTCTCCTGCATGCATCTGCCTCTGGGGATGCCACGGAGGCATTTGAAGATGTG GGGCACAGCACATCAGCCATCAGCATGATGAACAACTACTTGATTGGAAGCATCAAGGAC TATGTGCCTCCTAGTGCATCAGAGGCTACAACCATTGGCGGCAATGATGTGCCGCCAAAC TTCAGAAGGATGCCACAGAAGAAAGGACCTCCTGCTCCCAACACCTTTCTGGACTTCCTG CTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCGCTTGGTACTACCTGACCTTCATTGCC AAGGCCTAGTAAATTTGGTGAAGGTTTGAAGTATTGAACATTTTACTATGCCACGTCTGC TTCAGCGACACATGGAGATATATTCTGGTCAGTTCTAAGTTTTATTATGAGGTTTCTGGC TGTGAATTAGAAATGTCATCGTATTATTATTTGTTACCAAATTGTTGGCTTTGCTTCGAA GTTGGTACCACTCTTACATGTAAATGGCGATGGCTGCATCAGTAAAATGTATGGATGGGG CATTTTAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11712#0      CTCTCTTGGCGTGCTCCTGCTCAGCTGAGCTCGGGTGAGCTCTTTCTACCTCCAAGATTT 60
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      CCTCCTCCTACCTCCACTCCACTCGCCTCACCTCAGCTCACCTCAGCGTCGTCTTCTTCC 120
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      TTCCGCAACCTCGCAGGTTGAACCGGAGAGCGGGAGGAGCGAGTGAGTGGTGGTGGAGGC 180
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      CATGGCGGAGGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGG 240
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      GCACGCGTCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGACCAA 300
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      GTTCTTGGAAGACCACCCTGGTGGAGAGGATGTTCTCCTGCATGCATCTGGTCAGATGAG 360
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      ATTCAGATTCCTCCATTCCTATCAACTGTAATGATAATGTTTGATGCTAAAGCTGTGATG 420
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      CTATTGAAACTATTTACGACCTTATCTGCTCATCAATTTAATTGTGATGATAAATGCTCG 480
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      GATTCGTTGCTGTCAGTTAATTTTCTTCATTTTTGGTGGTCAGTTCAAGCCTGCAGTAGT 540
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      AGAATTAGATTGGTTCATGTTGTTTAGTTAAGAGAAACCAATTGTATCATGCTGCTCTGA 600
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      TCTGAATAGATGGTTGTGTTCAACACCTAGTCAACTGCCATTAGCAATTTATCATAAATC 660
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      AGCCCGTACGGTATTTGCTTTTGTAATGCAGCCAGTGGGCATCGATGCTGATTCATGATT 720
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      TGTACCACCAGCTTCTGTTAACCTTGTATTGTGCCACGTGGAAGCCTCATAACCATAGGC 780
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      ATATTCAACTCCTGTTGTTCTAATTGTCTAAGAGAATTAACAAAATTAAAATCATGATAG 840
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      AGCCGCTTGTTGCTTAATTCTTGCAAATATCTTGCCTTCTAAGTCATGGAATAACATGCA 900
consensus_11712#1      ------------------------------------------------------------
                                                                                   

consensus_11712#0      TTTTACATCATGAAAATTCTCAGTTATTCATTACCAAACCAATATAATGATGGCTTGCTA 960
consensus_11712#1      --------------------------------------------------------ACCA 4
                                                                                * *

consensus_11712#0      CTGTTTTCTTGGGAGACAAAACAATGCCAGGGCAATTTTAGTTTCAATATTTCTAAATAC 1020
consensus_11712#1      CCACACACCTGAGCTTCAGCTCCA-GCGGCGGCTCTCTTGGCGTGCTCCTGCTCAGCTGA 63
                       *      * ** *   **   * * **   ***  * ** *  *     *    *  *  

consensus_11712#0      CGTACGGTCTGATTAATTTATGATAAATATGTTGTCCCAGCAGAGACCAATGCATAGAAG 1080
consensus_11712#1      GCTCGGGTGAGCTCTTTCTACCTCCAAGAT-TTCCTCCTCCTACCTCCACTCCACTCGCC 122
                         *  ***  * *   * **     ** ** **   **  *     *** * **      

consensus_11712#0      TTAATGCTTTTTTTACTTTTCGGATGTTGCTTTCCTCTGGACTAAATTTCTGAGCCTCAC 1140
consensus_11712#1      TCAC--CTCAGCTCACCTC---AGCGTCGTCTTCTTCC--------TTCCGCAACCTCGC 169
                       * *   **    * ** *       ** *  *** **         ** *  * **** *

consensus_11712#0      TAATCACACTAAATTTGCTATTGCAAATGTTCCCCTTGTATTGTACTG-ATTCCATTGTA 1199
consensus_11712#1      AGGTTGAACCGGAGA-------GCGGGAGGAGCGAGTGAGTGGTGGTGGAGGCCATGGCG 222
                          *   **   *         **    *   *   **  * **  ** *  **** *  

consensus_11712#0      CTTGTTCCGTTTAATTGCAC-ATGCTATGTTGATATATTACTTTAACTAGATGACAAAAA 1258
consensus_11712#1      GAGGATGAGGCGGCCAGCGCCAAGAAGCTCTTCTCCGCCTCCGATGTCGTAGGGCACGCG 282
                          * *  *       ** * * *      *  *      *         * * **    

consensus_11712#0      TAAAATGTTAACATATGGTGCGGTTCTGAAAGAAAGACATTTGGAATAGATGCAAGGTTT 1318
consensus_11712#1      TCCAGGAAGGATTGCTGGGTCGTCATCCATGGCAAGGTGTATGATGTGA---CCAAGTTC 339
                       *  *      *    ***  **      *  * ***   * **   *     * * *** 

consensus_11712#0      ATTGACAAGTTTCTATTTTCTGTTGCCTCTGTATTTAATCAATTCTTGAAGCCTCTGGGG 1378
consensus_11712#1      TTGGAAGACCACCCTGGTGGAGAGGATGTTCTCCTGCATGCATCT-----GCCTCTGGGG 394
                        * **  *    *    *   *  *    * *  *  **  **       **********

consensus_11712#0      ATGCCACGGAGGCATTTGAAGATGTGGGGCACAGCACATCAGCCATCAGCATGATGAACA 1438
consensus_11712#1      ATGCCACGGAGGCATTTGAAGATGTGGGGCACAGCACATCAGCCATCAGCATGATGAACA 454
                       ************************************************************

consensus_11712#0      ACTACTTGATTGGAAGCATCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCA 1498
consensus_11712#1      ACTACTTGATTGGAAGCATCAAGGACTATGTGCCTCCTAGTGCATCAGAGGCTACAACCA 514
                       ************************************************************

consensus_11712#0      TTGGCGGCAATGATGTGCCGCCAAACTTCAGAAGGATGCCACAGAAGAAAGGACCTCCTG 1558
consensus_11712#1      TTGGCGGCAATGATGTGCCGCCAAACTTCAGAAGGATGCCACAGAAGAAAGGACCTCCTG 574
                       ************************************************************

consensus_11712#0      CTCCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCG 1618
consensus_11712#1      CTCCCAACACCTTTCTGGACTTCCTGCTCCCTCTGTTTGTGCTCGGCCTTGCCTTTGCCG 634
                       ************************************************************

consensus_11712#0      CTTGGTACTACCTGACCTTCATTGCCAAGGCCTAGTAAATTTGGTGAAGGTTTGAAGTAT 1678
consensus_11712#1      CTTGGTACTACCTGACCTTCATTGCCAAGGCCTAGTAAATTTGGTGAAGGTTTGAAGTAT 694
                       ************************************************************

consensus_11712#0      TGAACATTTTACTATGCCACGTCTGCTTCAGCGACACATGGAGATATATTCTGGTCAGTT 1738
consensus_11712#1      TGAACATTTTACTATGCCACGTCTGCTTCAGCGACACATGGAGATATATTCTGGTCAGTT 754
                       ************************************************************

consensus_11712#0      CTAAGTTTTATTATAAGGTTTAAGGCTGTGAATTAGAAATGTCATCGTATTATTATTTGT 1798
consensus_11712#1      CTAAGTTTTATTATGAGGTTTCTGGCTGTGAATTAGAAATGTCATCGTATTATTATTTGT 814
                       ************** ******  *************************************

consensus_11712#0      TACCAAATTGTTGGCTTTGCTTCGAAGTTGGTACCACTCTTACATGTAAATGGCGATGGC 1858
consensus_11712#1      TACCAAATTGTTGGCTTTGCTTCGAAGTTGGTACCACTCTTACATGTAAATGGCGATGGC 874
                       ************************************************************

consensus_11712#0      TGCATCAGTAAAATGTATGGATGGGGCATTTTCCTTTTCGCTATCAAAAAAAAAA 1913
consensus_11712#1      TGCATCAGTAAAATGTATGGATGGGGCATTTTAAAAA------------------ 911
                       ********************************                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)