cluster # 11713

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Oryza sativa
cluster # 11713 cluster # 11713 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11713#0 length = 898 sequences # 6

consensus_11713#1 length = 772 sequences # 2
consensus_11713#2 length = 360 sequences # 1

consensusID : consensus_11713#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 898
fasta sequence

                              [ACCGAGGCGAGAGGGAAGAGCACATGGCGAGCGGGCGAGGAGGAGGGGGTGGGGTGGCGTCGCCGACGCCGGCGAAGGTGGAGGGCGGCGGAGGAGGAGGAGGAGGGGGGCCGGGGATGCCGATGGCGGAGCTGGAGCAGGTGTTCCGGCGGTACGACGCGAACGGCGACGGGAAGATCTCGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCCGGCGAGGTGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGCTTCGTCGACCTCTCCGAGTTCGCCGCCTTCCACTGCGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGACGCCAAGGACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACAGCAACGGGAAGATCTCGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGCGACAAGTGCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGATGGCTGCGTCAACTTCGACGAGTTCAAGAAGATGATGGGCGGCGGCGGCGGCCGGCGGTAGGCTGGAGGGGACTGACTCCGTATGGTTGCCCGGTCAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTTATAAATCAAGCCTAATATTTAGCATGTGAACAACTTTTTAAGTAGATTTTAAAAAAGCCCCCCACTGATTTGATGGGTAGTGATGTAATCATGCAAAGGTAGTGGAGTGACATGCTGTATTACTGTTTCTGATATATACTGTACAACTTGACTAATGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071661             [ACCGAGGCGAGAGGGAAGAGCACATGGCGAGCGGGCGAGGAGGAGGGGGTGGGGTGGCGTCGCCGACGCCGGCGAAGGTGGAGGGCGGCGGAGGAGGAGGAGGAGGGGGGCCGGGGATGCCGATGGCGGAGCTGGAGCAGGTGTTCCGGCGGTACGACGCGAACGGCGACGGGAAGATCTCGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCCGGCGAGGTGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGCTTCGTCGACCTCTCCGAGTTCGCCGCCTTCCACTGCGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGACGCCAAGGACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACAGCAACGGGAAGATCTCGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGCGACAAGTGCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGATGGCTGCGTCAACTTCGACGAGTTCAAGAAGATGATGGGCGGCGGCGGCGGCCGGCGGTAGGCTGGAGGGGACTGACTCCGTATGGTTGCCCGGTCAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTTATAAATCAAGCCTAATATTTAGCATGTGAACAACTTTTTAAGTAGATTTTAAAAAAGCCCCCCACTGATTTGATGGGTAGTGATGTAATCATGCAAAGGTAGTGGAGTGACATGCTGTATTACTGTTTCTGATATATACTGTACAACTTG                                                                             ]
[+] EMBL AY224437             [                                GGGCGAGGAGGAGGGGGTGGGGTGGCGTCGCCGACGCCGGCGAAGGTGGAGGGCGGCGGAGGAGGAGGAGGAGGGGGGCCGGGGATGCCGATGGCGGAGCTGGAGCAGGTGTTCCGGCGGTACGACGCGAACGGCGACGGGAAGATCTCGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCCGGCGAGGTGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGCTTCGTCGACCTCTCCGAGTTCGCCGCCTTCCACTGCGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGACGCCAAGGACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACAGCAACGGGAAGATCTCGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGCGACAAGTGCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGATGGCTGCGTCAACTTCGACGAGTTCAAGAAGATGATGGGCGGCGGCGGCGGCCGGCGGTAGGtg                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA752634             [                                  GCGAGGAGGAGGCGGTGGGGTGGCGTCGCCG  G CGGCGAAGGTGGAGGGCGGCG  GG GGAGGAGGAGGGGGGCCGGGGATGCCGATGGCGGAGCTGGAGCAGGTGTTCCGGCGGTACGACGCGAACGGCGACGGGAAGATCTCGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCGCTGGGGGCGCCGCCGGGTCCCGACGAGGTGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGCTTCGTCGACCTCTCCGAGTTCGCCGCCTTCCACTGCGGCCCCACGCCACATGGCGGCGGCAAGGGTGGCGGCGGCGAGG   AGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACAGCAACGGGAAGATCTCGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGCGAGAAGT CTCCGTCGCCGACTGCTCCCGGATGATCCGATCCGTC AC CCGACGGCGACGGCTGCGTCAACTTCGAC                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA753643             [                                                                                                                                     GGAGCAGGTGTTCCGGCGGTACGACGCGAACGGCGACGGGAAGATCTCGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCCGGCGAGGTGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGCTTCGTCGACCTCTCCGAGTTCGCCGCCTTCCACTGCGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGACGCCAAGGACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACAGCAACGGGAAGATCTCGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGCGACAAGTGCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGATGGCTGCGTCAACTTCGACGAGTTCAAGAAGATGATGGGCGGCGGCGGCGGCCGGCGGTAGGCTGGAGGGGACTGACTCC                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU184789             [                                                                                                                                                                                                                                                                                                                                                                                                                                   AGCAACGGGAAGATCTNGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGCGACAAGTGCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGATGGCTGCGTCAACTTCGACGAGTTCAAGAAGATGATGGGCGGCGGCGGCGGCCGGCGGTAGGCTGGAGGGGACTGACTCCGTATGGTTGCCCGGTCAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTTATAAATCAAGCCTAATATTTAGCATGTGAACAACTTTTTAAGTAGATTTTAAAAAAGCCCCCCACTGATTTGATGGGTAGTGATGTAAaaa                                                                                                                                        ]
[+] EMBL CF310739             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGTCAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTTATAAATCAAGCCTAATATTTAGCATGTGAACAACTTTTTAAGTAGATTTTAAAAAAGCCCCCCACTGATTTGATGGGTAGTGATGTAATCATGCAAAGGTAGTGGAGTGACATGCTGTATTACTGTTTCTGATATATACTGTACAACTTGACTAATGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11713#0
ACCGAGGCGAGAGGGAAGAGCACATGGCGAGCGGGCGAGGAGGAGGGGGTGGGGTGGCGT
CGCCGACGCCGGCGAAGGTGGAGGGCGGCGGAGGAGGAGGAGGAGGGGGGCCGGGGATGC
CGATGGCGGAGCTGGAGCAGGTGTTCCGGCGGTACGACGCGAACGGCGACGGGAAGATCT
CGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCCGGCGAGG
TGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGCTTCGTCGACCTCTCCGAGT
TCGCCGCCTTCCACTGCGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGACGCCAAGG
ACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACA
GCAACGGGAAGATCTCGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGCGACAAGT
GCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGATGGCTGCG
TCAACTTCGACGAGTTCAAGAAGATGATGGGCGGCGGCGGCGGCCGGCGGTAGGCTGGAG
GGGACTGACTCCGTATGGTTGCCCGGTCAAAGTTTTATCTGTTCTTGCATGGTTTCCGTA
ATTAGAAGCTTATAAATCAAGCCTAATATTTAGCATGTGAACAACTTTTTAAGTAGATTT
TAAAAAAGCCCCCCACTGATTTGATGGGTAGTGATGTAATCATGCAAAGGTAGTGGAGTG
ACATGCTGTATTACTGTTTCTGATATATACTGTACAACTTGACTAATGTTCAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_11713#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 772
fasta sequence

                              [AAGATCTCGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCCGGCGAGGTGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGTTTCGTCGACCTCTCCGAGTTCGCCGCCTTCCACTGGGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGACGCCAAGGACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACAGCAACGGGAAGATCTCGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGCGACAAGTGCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGATGGCTGCGTCAATTTCGACGAGTTCAAGAAGATGATGGGCGGCGGCGGCGGCCGGCGGTAGGCTGGAGGGGACTGACTCCGTATGGTTGCCCGGTCAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTTATAAATCAAGCCTAATATTTAGCATGTGAACAACTTTTTAAGTAGATTTTAAAAAAGCCCCCCACTGATTTGATGGGTAGTGATGTAATCATGCAAAGGTAGTGGAGTGACATGCTGTATTACTGTTTCTGATATATACTGTACAACTTGACTAATGTTCAATTTAAAAGGTGTATAAACAAGCTTGGGCAAGGGATTGCCGTCCAGCCTGGGCAAGAATGTCGAGTTTTATAGCCTTGTTTGTTTAATATTTGTAACACCCAGTAAAAAAAAA]

[-] EMBL CB644162             [AAGATCTCGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCCGGCGAGGTGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGTTTCGTCGACCTCTCCGAGTTCGCCGCCTTCCACTGGGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGACGCCAAGGACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACAGCAACGGGAAGATCTCGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGCGACAAGTGCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGATGGCTGCGTCAATTTCGACGAGTTCAAGAAGATGATGGGCGGCGGCGGCGGCCGGCGGTAGGCTGGAGGGGACTGACTCCGTATGGTTGCCCGGTCAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTTATAAATCAAGCCTAATATTTAGCATGTGAACAACTTTTTAAGTAGATTTTAAAAAAGCCCCCCACTGATTTGATGGGTAGTGATGTAATCATGCAAAGGTAGTGGAGTGACATGCTGTATTACTGTTTCTGATATATACTGTACAACTTGACTAATGTTCAATTTAAAAGGTGTATAAACAAGCTTGG                                                                                      ]
[+] EMBL BI812628             [                                                                                                                                                                                                                                                                                    CACCGCGTGCTCC CCAGCTC GCGACAAGTGCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGAT GCTGCGTC ACTTCGACGAGTTCAAGAAGATGATGGGCGGC GC GCGGCC GCGGTAGGCTGGAGGGGACTGACTCCGTATGGTTGCCCGGTCAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTTATAAATCAAGCCTAATATTTAGCATGTGAACAACTTTTTAAGTAGATTTTAAAAAAGCCCCCCCCTGATTTGATGGGTAGTGATGTAATCATGC AAGGTAGTGGAGTGACATGCTGTATTACTGTTTCTGATATATACTGTAC ACTTGACTAATGTTCAA CTGATGGGTGTATAAACAAGCTTGGGCAAGGGATTGCCGTCCAGCCTGGGCAAGAATGTCGAGTTTTATAGCCTTGTTTGTTTAATATTTGTAACACCCAGTAAAAAAAAA]




>consensus_11713#1
AAGATCTCGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCC
GGCGAGGTGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGTTTCGTCGACCTC
TCCGAGTTCGCCGCCTTCCACTGGGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGAC
GCCAAGGACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGAC
GCCGACAGCAACGGGAAGATCTCGGCGCGGGAGCTCCACCGCGTGCTCCGCCAGCTCGGC
GACAAGTGCTCCGTCGCCGACTGCTCCCGGATGATCCGGTCCGTCGACGCCGACGGCGAT
GGCTGCGTCAATTTCGACGAGTTCAAGAAGATGATGGGCGGCGGCGGCGGCCGGCGGTAG
GCTGGAGGGGACTGACTCCGTATGGTTGCCCGGTCAAAGTTTTATCTGTTCTTGCATGGT
TTCCGTAATTAGAAGCTTATAAATCAAGCCTAATATTTAGCATGTGAACAACTTTTTAAG
TAGATTTTAAAAAAGCCCCCCACTGATTTGATGGGTAGTGATGTAATCATGCAAAGGTAG
TGGAGTGACATGCTGTATTACTGTTTCTGATATATACTGTACAACTTGACTAATGTTCAA
TTTAAAAGGTGTATAAACAAGCTTGGGCAAGGGATTGCCGTCCAGCCTGGGCAAGAATGT
CGAGTTTTATAGCCTTGTTTGTTTAATATTTGTAACACCCAGTAAAAAAAAA

consensusID : consensus_11713#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 360
fasta sequence

                              [ACAGCCGACAGCCAAACGGGAAGATCTCGGCAGCCGGGAGCTCACACCAGCAGTGCTCCAGCCAGCTCAGGCGACAAGTGGCTGCACAGTCANCCGACTGGCTCACCAGGATGGATCCAGGTGCACAGTCAGACTNCCAGACAGGCAGATGGGCTGCAGTCAAACTTCGACGAGTTCAAGAAGATGATGGTCAGGCAGGCGGCAGGCCAGGCAGGTAGGCATGGAGGGGACTGACTCCAGTATGGTTGCCCAGGTCAAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTGTGATGAAATGCAAGCCTAATGATGTTAGCATGGTGAACAAACTGTGTGTTGAAGTAGATG]

[+] EMBL BI805734             [ACAGCCGACAGCCAAACGGGAAGATCTCGGCAGCCGGGAGCTCACACCAGCAGTGCTCCAGCCAGCTCAGGCGACAAGTGGCTGCACAGTCANCCGACTGGCTCACCAGGATGGATCCAGGTGCACAGTCAGACTNCCAGACAGGCAGATGGGCTGCAGTCAAACTTCGACGAGTTCAAGAAGATGATGGTCAGGCAGGCGGCAGGCCAGGCAGGTAGGCATGGAGGGGACTGACTCCAGTATGGTTGCCCAGGTCAAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTGTGATGAAATGCAAGCCTAATGATGTTAGCATGGTGAACAAACTGTGTGTTGAAGTAGATG]




>consensus_11713#2
ACAGCCGACAGCCAAACGGGAAGATCTCGGCAGCCGGGAGCTCACACCAGCAGTGCTCCA
GCCAGCTCAGGCGACAAGTGGCTGCACAGTCANCCGACTGGCTCACCAGGATGGATCCAG
GTGCACAGTCAGACTNCCAGACAGGCAGATGGGCTGCAGTCAAACTTCGACGAGTTCAAG
AAGATGATGGTCAGGCAGGCGGCAGGCCAGGCAGGTAGGCATGGAGGGGACTGACTCCAG
TATGGTTGCCCAGGTCAAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTG
TGATGAAATGCAAGCCTAATGATGTTAGCATGGTGAACAAACTGTGTGTTGAAGTAGATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11713#0      ACCGAGGCGAGAGGGAAGAGCACATGGCGAGCGGGCGAGGAGGAGGGGGTGGGGTGGCGT 60
consensus_11713#1      ------------------------------------------------------------
consensus_11713#2      ------------------------------------------------------------
                                                                                   

consensus_11713#0      CGCCGACGCCGGCGAAGGTGGAGGGCGGCGGAGGAGGAGGAGGAGGGGGGCCGGGGATGC 120
consensus_11713#1      ------------------------------------------------------------
consensus_11713#2      ------------------------------------------------------------
                                                                                   

consensus_11713#0      CGATGGCGGAGCTGGAGCAGGTGTTCCGGCGGTACGACGCGAACGGCGACGGGAAGATCT 180
consensus_11713#1      -----------------------------------------------------AAGATCT 7
consensus_11713#2      ------------------------------------------------------------
                                                                                   

consensus_11713#0      CGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCCGGCGAGG 240
consensus_11713#1      CGGCGGAGGAGCTGGCGTCCGTGCTGCGGGCACTGGGGGCGCCCCTCGGTCCCGGCGAGG 67
consensus_11713#2      ------------------------------------------------------------
                                                                                   

consensus_11713#0      TGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGCTTCGTCGACCTCTCCGAGT 300
consensus_11713#1      TGCGGCGCATGATGGACGAGATGGACTCCGACCGCGACGGTTTCGTCGACCTCTCCGAGT 127
consensus_11713#2      ------------------------------------------------------------
                                                                                   

consensus_11713#0      TCGCCGCCTTCCACTGCGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGACGCCAAGG 360
consensus_11713#1      TCGCCGCCTTCCACTGGGGCCCCACGCCGGCGCACGGCGGCAAGGGCGGCGACGCCAAGG 187
consensus_11713#2      ------------------------------------------------------------
                                                                                   

consensus_11713#0      ACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACA 420
consensus_11713#1      ACCAGGAGGCCGCGTCGGAGGCGGAGCTGAGGGAGGCGTTCCGGATGTACGACGCCGACA 247
consensus_11713#2      --------------------------------------------------ACAGCCGACA 10
                                                                            *******

consensus_11713#0      GC--AACGGGAAGATCTCGGCG--CGGGAGCTC-CACCGC--GTGCTCC-GCCAGCTC-G 471
consensus_11713#1      GC--AACGGGAAGATCTCGGCG--CGGGAGCTC-CACCGC--GTGCTCC-GCCAGCTC-G 298
consensus_11713#2      GCCAAACGGGAAGATCTCGGCAGCCGGGAGCTCACACCAGCAGTGCTCCAGCCAGCTCAG 70
                       **  *****************   ********* ****    ******* ******** *

consensus_11713#0      GCGACAAGTG----CTCCGTC-GCCGACTG---CTCCCGGATG-ATCCGGT----CCGTC 518
consensus_11713#1      GCGACAAGTG----CTCCGTC-GCCGACTG---CTCCCGGATG-ATCCGGT----CCGTC 345
consensus_11713#2      GCGACAAGTGGCTGCACAGTCANCCGACTGGCTCACCAGGATGGATCCAGGTGCACAGTC 130
                       **********    * * ***  *******   * ** ***** **** *     * ***

consensus_11713#0      -GACGCC--GACGGC--GATGG-CTGC-GTCAA-CTTCGACGAGTTCAAGAAGATGATGG 570
consensus_11713#1      -GACGCC--GACGGC--GATGG-CTGC-GTCAA-TTTCGACGAGTTCAAGAAGATGATGG 397
consensus_11713#2      AGACTNCCAGACAGGCAGATGGGCTGCAGTCAAACTTCGACGAGTTCAAGAAGATGATGG 190
                        ***  *  *** *   ***** **** *****  *************************

consensus_11713#0      GCGGC--GGCGGCGGCC--GGC-GGTAGGC-TGGAGGGGACTGACTCC-GTATGGTTGCC 623
consensus_11713#1      GCGGC--GGCGGCGGCC--GGC-GGTAGGC-TGGAGGGGACTGACTCC-GTATGGTTGCC 450
consensus_11713#2      TCAGGCAGGCGGCAGGCCAGGCAGGTAGGCATGGAGGGGACTGACTCCAGTATGGTTGCC 250
                        * *   ****** * *  *** ******* ***************** ***********

consensus_11713#0      C-GGTCAAA-GTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCT----TATAAAT 677
consensus_11713#1      C-GGTCAAA-GTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCT----TATAAAT 504
consensus_11713#2      CAGGTCAAAAGTTTTATCTGTTCTTGCATGGTTTCCGTAATTAGAAGCTGTGATGAAATG 310
                       * ******* ***************************************    *  **  

consensus_11713#0      CAAGCCTAATATT--TAGCATG-TGAACAACTTTTTAAGTAGATTTTAAAAAAGCCCCCC 734
consensus_11713#1      CAAGCCTAATATT--TAGCATG-TGAACAACTTTTTAAGTAGATTTTAAAAAAGCCCCCC 561
consensus_11713#2      CAAGCCTAATGATGTTAGCATGGTGAACAAACTGTGTGTTGAAGTAGATG---------- 360
                       **********  *  ******* *******  * *    *  * *  *            

consensus_11713#0      ACTGATTTGATGGGTAGTGATGTAATCATGCAAAGGTAGTGGAGTGACATGCTGTATTAC 794
consensus_11713#1      ACTGATTTGATGGGTAGTGATGTAATCATGCAAAGGTAGTGGAGTGACATGCTGTATTAC 621
consensus_11713#2      ------------------------------------------------------------
                                                                                   

consensus_11713#0      TGTTTCTGATATATACTGTACAACTTGACTAATGTTCAAAAAAAAAAAAAAAAAAAAAAA 854
consensus_11713#1      TGTTTCTGATATATACTGTACAACTTGACTAATGTTCAATTTAAAAGGTGTATAAACAAG 681
consensus_11713#2      ------------------------------------------------------------
                                                                                   

consensus_11713#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------- 898
consensus_11713#1      CTTGGGCAAGGGATTGCCGTCCAGCCTGGGCAAGAATGTCGAGTTTTATAGCCTTGTTTG 741
consensus_11713#2      ------------------------------------------------------------
                                                                                   

consensus_11713#0      -------------------------------
consensus_11713#1      TTTAATATTTGTAACACCCAGTAAAAAAAAA 772
consensus_11713#2      -------------------------------