These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11716#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2117 fasta sequence [CCTTCCATTATAGCCCCAAAAATACAGACACACACAAAAAAAAAAGCAGAGAATTTGTGTGCAAGCATCCCCTTATCGCCTCCCCCCTTGTGTCTCCTATCCTTCGCCGATCGAATCATTTGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGGGGGAGGTGGTTGAGTCCGAGTTCGATGCTCCGGGGCCTCAAGATCCAGTCTCGACGCCGTTCTTGAGCTCTCCGTGTTGATCTCTGCGCCGCGAAGGGAGATGGGCAACGCCGGTAGCAACGGCGGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGGCCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCCGGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTACACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCCGTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGGGGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCCTGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCTGGGAAAGAATGTGTTATTTGCCTCTCGGAGCCAAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGTCCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGAGATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAAAGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACACAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAGATTGTGGCCTTCCGACCTTCCCCGTATCGCGCTCTGCGCTCTCGCCTTGAGCATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTTTGCCTTGATGAGATGAGATGACACCATATA] [+] EMBL AK100160 [CCTTCCATTATAGCCCCAAAAATACAGACACACACAAAAAAAAAAGCAGAGAATTTGTGTGCAAGCATCCCCTTATCGCCTCCCCCCTTGTGTCTCCTATCCTTCGCCGATCGAATCATTTGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGGGGGAGGTGGTTGAGTCCGAGTTCGATGCTCCGGGGCCTCAAGATCCAGTCTCGACGCCGTTCTTGAGCTCTCCGTGTTGATCTCTGCGCCGCGAAGGGAGATGGGCAACGCCGGTAGCAACGGCGGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGGCCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCCGGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTACACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCCGTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGGGGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCCTGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCTGGGAAAGAATGTGTTATTTGCCTCTCGGAGCCAAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGTCCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGAGATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAAAGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACACAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAGATTGTGGCCTTCCGACCTTCCCCGTATCGCGCTCTGCGCTCTCGCCTTGAGCATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTTTGCCTTGATGAGATGAGATGACACCATATA] [+] EMBL C97314 [ AGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTAATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTTTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGGGGGAGGTGGTTNANTCCGAGTTCGATGCTCCGGGGCCTCAAGATCCAGTCTCGACGCCGTTNTTGAGCTCTCCGTGTTGATCTCTGCGCCGCGAAGGGAGATGGGCAAC ] [+] EMBL C98642 [ cCATATGATCATGATATATGAACCTAGATTGTGGCCTTCCGACCTTCCCCGTAAANCCCTCTGCGCTCTCGCCTTGAGCATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCNTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATNACATGGATTCATGCGTGTACTATTGCCCTAACCTGAANAAGTGGAGAACATNTCATACTTAATGGGATTTCCCTCCATCAGGAGTNAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTTTGCCTTGATGAGATGAGATGACACCAaaa ] consensusID : consensus_11716#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1847 fasta sequence [AATCATTTGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGGCCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCCGGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTACACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCCGTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGGGGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCCTGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCT-GGGAAAGAATGTGTTATTTGCCTCTCGGAGCCAAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGTCCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGAGATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAAAGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACACAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAGATTGTGGCCTTCCGACCTTCCCCGTA-TCGCGCTCTGCGCTCTCGCCTTGAGC-ATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTT] [+] EMBL AK072343 [AATCATTTGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGGCCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCCGGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTACACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCCGTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGGGGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCCTGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCT GGGAAAGAATGTGTTATTTGCCTCTCGGAGCCAAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGTCCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGAGATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAAAGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACACAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAGATTGTGGCCTTCCGACCTTCCCCGTA TCGCGCTCTGCGCTCTCGCCTTGAGC ATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTT] [+] EMBL AU083424 [ GATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCTGGGGAAAGAATGTGTTATTTGCCTCTCGGAGCCA ] [+] EMBL OSR3228A [ TATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCT ] [+] EMBL AU032025 [ TGTGNCCTTCCGACCTTCCCCGTACTC NGCTCTGCGCTCTCGCCTTGAGCNATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTNTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAAa ] consensusID : consensus_11716#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 279 fasta sequence [AANTTTGACCCNGGACCANGNGGCTGCCTGACCGTACCTGTGTNGGTGAAGGNCTCNAGATGCCAAGAANGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAAGTGGAANAACATCTCATACTTAATGGGATTTCCCTCCATCAGGANTTAAAAAAGTTACAGCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BE228478 [AANTTTGACCCNGGACCANGNGGCTGCCTGACCGTACCTGTGTNGGTGAAGGNCTCNAGATGCCAAGAANGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAAGTGGAANAACATCTCATACTTAATGGGATTTCCCTCCATCAGGANTTAAAAA ] [+] EMBL CA765036 [ gtGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAG AAGTGG AGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11716#0 CCTTCCATTATAGCCCCAAAAATACAGACACACACAAAAAAAAAAGCAGAGAATTTGTGT 60 consensus_11716#1 ------------------------------------------------------------ consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GCAAGCATCCCCTTATCGCCTCCCCCCTTGTGTCTCCTATCCTTCGCCGATCGAATCATT 120 consensus_11716#1 -----------------------------------------------------AATCATT 7 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 TGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTG 180 consensus_11716#1 TGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTG 67 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTC 240 consensus_11716#1 CGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTC 127 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGA 300 consensus_11716#1 GCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGA 187 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CGGGGGAGGTGGTTGAGTCCGAGTTCGATGCTCCGGGGCCTCAAGATCCAGTCTCGACGC 360 consensus_11716#1 CG---------------------------------------------------------- 189 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CGTTCTTGAGCTCTCCGTGTTGATCTCTGCGCCGCGAAGGGAGATGGGCAACGCCGGTAG 420 consensus_11716#1 ------------------------------------------------------------ consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CAACGGCGGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGG 480 consensus_11716#1 ---------AGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGG 240 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCC 540 consensus_11716#1 CCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCC 300 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTA 600 consensus_11716#1 GGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTA 360 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCC 660 consensus_11716#1 CACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCC 420 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGG 720 consensus_11716#1 GTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGG 480 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCC 780 consensus_11716#1 GGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCC 540 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 TGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGT 840 consensus_11716#1 TGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGT 600 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCG 900 consensus_11716#1 CGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCG 660 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCAC 960 consensus_11716#1 GATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCAC 720 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAAC 1020 consensus_11716#1 CCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAAC 780 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCA 1080 consensus_11716#1 GGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCA 840 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTT 1140 consensus_11716#1 GAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTT 900 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 ATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCC 1200 consensus_11716#1 ATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCC 960 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 TGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCAC 1260 consensus_11716#1 TGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCAC 1020 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 ACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGAT 1320 consensus_11716#1 ACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGAT 1080 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGT 1380 consensus_11716#1 CCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGT 1140 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GGAAGGCGATGCTGATGCCAATGATCCTGGGAAAGAATGTGTTATTTGCCTCTCGGAGCC 1440 consensus_11716#1 GGAAGGCGATGCTGATGCCAATGATCCTGGGAAAGAATGTGTTATTTGCCTCTCGGAGCC 1200 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 AAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGT 1500 consensus_11716#1 AAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGT 1260 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGA 1560 consensus_11716#1 CCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGA 1320 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAA 1620 consensus_11716#1 GATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAA 1380 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 AGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACA 1680 consensus_11716#1 AGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACA 1440 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 CAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAG 1740 consensus_11716#1 CAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAG 1500 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 ATTGTGGCCTTCCGACCTTCCCCGTATCGCGCTCTGCGCTCTCGCCTTGAGCATGGGGAG 1800 consensus_11716#1 ATTGTGGCCTTCCGACCTTCCCCGTATCGCGCTCTGCGCTCTCGCCTTGAGCATGGGGAG 1560 consensus_11716#2 ------------------------------------------------------------ consensus_11716#0 GAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGT 1860 consensus_11716#1 GAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGT 1620 consensus_11716#2 --------------------------------------AANTTTGACCCNGG-ACCANGN 21 * * * * ** * * * consensus_11716#0 GGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCT-TAGATGCCAAGA-GGAGTGGAGTGG 1918 consensus_11716#1 GGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCT-TAGATGCCAAGA-GGAGTGGAGTGG 1678 consensus_11716#2 GGCTGCCTGACCGTACCTGTGTNGGTGAAGGNCTCNAGATGCCAAGAANGAGTGGAGTGG 81 **** ******* ******** ******** ** *********** *********** consensus_11716#0 GTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAA-G 1977 consensus_11716#1 GTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAA-G 1737 consensus_11716#2 GTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAAG 141 ********************************************************** * consensus_11716#0 TGGA-GAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGC 2036 consensus_11716#1 TGGA-GAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGC 1796 consensus_11716#2 TGGAANAACATCTCATACTTAATGGGATTTCCCTCCATCAGGANTTAAAAAAGTTACAGC 201 **** ************************************* * **** ********* consensus_11716#0 AGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTTTGCCTTGAT 2096 consensus_11716#1 AGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTT--------- 1847 consensus_11716#2 AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 261 * * * * * * **** * * * * * consensus_11716#0 GAGATGAGATGACACCATATA 2117 consensus_11716#1 --------------------- consensus_11716#2 AAAAAAAAAAAAAAAAAA--- 279 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||