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Oryza sativa
cluster # 11717 cluster # 11717       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11717#0 length = 1092 sequences # 5  
consensus_11717#1 length = 441 sequences # 1  
consensus_11717#2 length = 408 sequences # 2  
consensus_11717#3 length = 386 sequences # 1  

consensusID : consensus_11717#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1092
fasta sequence
                              [TCGCTGCCGCGTGCGGGGGAAAAAATCGTCGACTCCCCCACCACCATGGCCGCGCGCCTTCACCTCCGCCTCGGCCCCCGCCTCCGCGGGTTCGCGTCCTCCTTCGCCCCCCTCCTCGCCGCGCACCCCAGAGCGCTGCCCCTCTCCCGCATGGGCTCGGTGGCGCCTCTCGCGGCGGCACGCGCCCGCCGCGGCTTCGGTTCCGCCGTCGCCACCGCGCCGCCGGCCGAGGACGAGGACTTCGCCACAGCTGCTGACCTCCAGTTCGAGCCGCCGCTCAAGGTCGTGAAGTACCCCGACCCAATCCTACGGGCTCGCAACAAGCGCATCAACACCTTCGATGACAACCTCCGCAGCCTCACTGATGAGATGTTCGACGTTATGTACAAGACTGATGGAATTGGTCTCTCTGCACCACAAGTTGGGGTGAATGTACAGCTTATGGTATTTAATCCAGCTGGTGTGAAGGGAGAAGGA-GAGGAGATTGTCCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTAGTGTATGA-GGAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGT-GGTGAGACCAGACAATGTCAAAATTGATGCTCA-GGATGT-TA-CAGGGGCAAAGATTAAAGTTAAA-TTG-TCA-GGT-CTGTCTGCAAG-AGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTCTTTGACAGGATGTCTCTTGATGTTCTTGAGAGCGTGCGTGAGGGACTGAAGGACCTAGAGAAGAAATATGAGGAAAGTACAGGGCTAGTAAGCCCTGAAAGTATTGAGAACTACCAAGGAAGAAAGGATCTCATTAGTTTCTCAAGATGAATAGCTTTCGGTTCTGGCAGTTTTTCAAAACATCCTGCTGAGCTTCACATTGAAGATTGTGTATTAGAACAGTTGCCAGTATCACATATTCTTCTGTCATTCTACTTTTTGCCAGTCTTGCTGTATCTAGTTTTGTGCAACA-CCAGTGATATTACAACCAGAAATTATGCTAGTGATGAATGAGCTGTATTTCCTAAGAAGGAATATGTGAACCATATTAGTGTTTGCATATATATG]

[+] EMBL AK106980             [TCGCTGCCGCGTGCGGGGGAAAAAATCGTCGACTCCCCCACCACCATGGCCGCGCGCCTTCACCTCCGCCTCGGCCCCCGCCTCCGCGGGTTCGCGTCCTCCTTCGCCCCCCTCCTCGCCGCGCACCCCAGAGCGCTGCCCCTCTCCCGCATGGGCTCGGTGGCGCCTCTCGCGGCGGCACGCGCCCGCCGCGGCTTCGGTTCCGCCGTCGCCACCGCGCCGCCGGCCGAGGACGAGGACTTCGCCACAGCTGCTGACCTCCAGTTCGAGCCGCCGCTCAAGGTCGTGAAGTACCCCGACCCAATCCTACGGGCTCGCAACAAGCGCATCAACACCTTCGATGACAACCTCCGCAGCCTCACTGATGAGATGTTCGACGTTATGTACAAGACTGATGGAATTGGTCTCTCTGCACCACAAGTTGGGGTGAATGTACAGCTTATGGTATTTAATCCAGCTGGTGTGAAGGGAGAAGGA GAGGAGATTGTCCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTAGTGTATGA GGAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGT GGTGAGACCAGACAATGTCAAAATTGATGCTCA GGATGT TA CAGGGGCAAAGATTAAAGTTAAA TTG TCA GGT CTGTCTGCAAG AGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTCTTTGACAGGATGTCTCTTGATGTTCTTGAGAGCGTGCGTGAGGGACTGAAGGACCTAGAGAAGAAATATGAGGAAAGTACAGGGCTAGTAAGCCCTGAAAGTATTGAGAACTACAAAGGAAGAAAGGATCTCATTAGTTTCTCAAGATGAATAGCTTTCGGTTCTGGCAGTTTTTCAAAACATCCTGCTGAGCTTCACATTGAAGATTGTGTATTAGAACAGTTGCCAGTATCACATATTCTTCTGTCATTCTACTTTTTGCCAGTCTTGCTGTATCTAGTTTTGTGCAACA CCAGTGATATTACAACCAGAAATTAT                                                                     ]
[+] EMBL CA753356             [                                                                                                                       CGCGCACCCCAGAGCGCTGCCCCTCTCCCGCATGGGCTCGGTGGCGCCTCTCGCGGCGGCACGCGCCCGCCGCGGCTTCGGTTCCGCCGTCGCCACCGCGCCGCCGGCCGAGGACGAGGACTTCGCCACAGCTGCTGACCTCCAGTTCGAGCCGCCGCTCAAGGTCGTGAAGTACCCCGACCCAATCCTACGGGCTCGCAACAAGCGCATCAACACCTTCGATGACAACCTCCGCAGCCTCACTGATGAGATGTTCGACGTTATGTACAAGACTGATGGAATTGGTCTCTCTGCACCACAAGTTGGGGTGAATGTACAGCTTATGGTATTTAATCCAGCTGGTGTGAAGGGAGAAGGA GAGGAGATTGTCCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTAGTGTATGAGGGAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGTGGGTGAGACCAGACAATGTCAAAATTGATGCTCAGGGATGTNNACCAGGGGCAAAGATTAAAGGTAAATTTGTTCA GGTCCTGTCTGCAAGAAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF322682             [                                                                                                                                                                         TCGCGGCGGCACGCGCCCGCCGCGGCTTCGGTTCCGCCGTCGCCACCGCGCCGCCGGCCGAGGACGAGGACTTCGCCACAGCTGCTGACCTCCAGTTCGAGCCGCCGCTCAAGGTCGTGAAGTACCCCGACCCAATCCTACGGGCTCGCAACAAGCGCATCAACACCTTCGATGACAACCTCCGCAGCCTCACTGATGAGATGTTCGACGTTATGTACAAGACTGATGGAATTGGTCTCTCTGCACCACAAGTTGGGGTGAATGTACAGCTTATGGTATTTAATCCAGCTGGTGTGAAGGGAGAAGGANGAGGAGATTGTCCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTAGTGTATGA GGAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGT GGTGAGACCAGACAATGTCAAAATTGATGCTCA GGATGT TA CAGGGGCAAAGATTAAAGTTAAA NTG TCAGGGT CTGTCTGCAAG AGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTC                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB964897             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATTTACAGGGGATTCTTTTCTTTGACAGGATGTCTCTTGATGTTCTTGAGAGCGTGCGTGAGGGACTGAAGGACCTAGAGAAGAAATATGAGGAAAGTACAGGGCTAGTAAGCCCTGAAAGTATTGAGAACTACCAAGGAAGAAAGGATCTCATTAGTTTCTCAAGATGAATAGCTTTCGGTTCTGGCAGTTTTTCAAAACATCCTGCTGAGCTTCACATTGAAGATTGTGTATTAGAACCGTTGCCAGTATCACATATTCTTCTGTCATTCTACTTTTTGCCAGTCTTGCTGTATCTAGTTTTGTGCAACC CCCGTGATATTACAACCAGAAATTATGCTAGTGATGAATGAGCTGTATTTCCTAAGAAGGAATATGTGAACCATATTAGTGTTTGCATATATATG]
[-] EMBL CB966922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGATTCTTTTCTTTGACAGGATGTCTCTTGATGTTCTTGAGAGCGTGCGTGAGGGATTGAAGGACCTAGAGAAGAAATATGAGGAAAGTACAGGGCTAGTAAGCCCTGAAAGTATTGAGAACTACCAAGGAAGAAAGGATCTCATTAGTTTCTCAAGATGAATAGCTTTCGGTTCTGGCAGTTTTTCCAAACATCCTGCTGAGCTTCACATTGAAGATTGTGTATTAGAACAGTTGCCAGTATCACATATTCTTCTGTCATTCTACTTTTTGCCAGTCTTGCTGTATCTAGTTTTGTGCAAAACCCAGTGATATTACAACCAGAAATTATGCTAGTGATGAATGAGCTGTATTTCCTAAGAAGGAATATGTGAACAATATTAGTGTTTGCATATATATG]


>consensus_11717#0 TCGCTGCCGCGTGCGGGGGAAAAAATCGTCGACTCCCCCACCACCATGGCCGCGCGCCTT CACCTCCGCCTCGGCCCCCGCCTCCGCGGGTTCGCGTCCTCCTTCGCCCCCCTCCTCGCC GCGCACCCCAGAGCGCTGCCCCTCTCCCGCATGGGCTCGGTGGCGCCTCTCGCGGCGGCA CGCGCCCGCCGCGGCTTCGGTTCCGCCGTCGCCACCGCGCCGCCGGCCGAGGACGAGGAC TTCGCCACAGCTGCTGACCTCCAGTTCGAGCCGCCGCTCAAGGTCGTGAAGTACCCCGAC CCAATCCTACGGGCTCGCAACAAGCGCATCAACACCTTCGATGACAACCTCCGCAGCCTC ACTGATGAGATGTTCGACGTTATGTACAAGACTGATGGAATTGGTCTCTCTGCACCACAA GTTGGGGTGAATGTACAGCTTATGGTATTTAATCCAGCTGGTGTGAAGGGAGAAGGAGAG GAGATTGTCCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTAGTGTATGAG GAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGTGGTGAGACCAGACAATGTCAAA ATTGATGCTCAGGATGTTACAGGGGCAAAGATTAAAGTTAAATTGTCAGGTCTGTCTGCA AGAGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTCTTTGACAGGATGTCT CTTGATGTTCTTGAGAGCGTGCGTGAGGGACTGAAGGACCTAGAGAAGAAATATGAGGAA AGTACAGGGCTAGTAAGCCCTGAAAGTATTGAGAACTACCAAGGAAGAAAGGATCTCATT AGTTTCTCAAGATGAATAGCTTTCGGTTCTGGCAGTTTTTCAAAACATCCTGCTGAGCTT CACATTGAAGATTGTGTATTAGAACAGTTGCCAGTATCACATATTCTTCTGTCATTCTAC TTTTTGCCAGTCTTGCTGTATCTAGTTTTGTGCAACACCAGTGATATTACAACCAGAAAT TATGCTAGTGATGAATGAGCTGTATTTCCTAAGAAGGAATATGTGAACCATATTAGTGTT TGCATATATATG



consensusID : consensus_11717#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 441
fasta sequence
                              [TTTTTTCTTTTGACCACGGATTTTCTGCTTTGATCGTTTCTTGGGGAGGCGTCGCGTGATGGGACCTGAAGGACCCTATGAGAACGAAATATTGATGGAAAGTACCACGGGCTAGTTAAGCCCCTGGAAAGTGATTGGAGAACTACCCAATGGAAGAAACGGATTCTCACTTAGTTTCTCCCAGATGGAATGAGCTTTCCGGTTCTGGCCAGTTGTTTCCAAAACATCCTGCTGGAGCTTCACCTTGGAAGATTGTGTGATTAGAACCAGTTGCCCAGTATCACATATTCTTCTGGTGCATTCTACTTTTTTGCCCGTCTTGCTGTATCTAGTTTTGGGCCAACACCCGTGATATTACCACCCCGAAATTATGCTAGTGATGAATGAGCTGTATTTCCTAAGAAGGAATATGTGAACCATATTAGTGTTTGCATATATATG]

[-] EMBL CB964619             [TTTTTTCTTTTGACCACGGATTTTCTGCTTTGATCGTTTCTTGGGGAGGCGTCGCGTGATGGGACCTGAAGGACCCTATGAGAACGAAATATTGATGGAAAGTACCACGGGCTAGTTAAGCCCCTGGAAAGTGATTGGAGAACTACCCAATGGAAGAAACGGATTCTCACTTAGTTTCTCCCAGATGGAATGAGCTTTCCGGTTCTGGCCAGTTGTTTCCAAAACATCCTGCTGGAGCTTCACCTTGGAAGATTGTGTGATTAGAACCAGTTGCCCAGTATCACATATTCTTCTGGTGCATTCTACTTTTTTGCCCGTCTTGCTGTATCTAGTTTTGGGCCAACACCCGTGATATTACCACCCCGAAATTATGCTAGTGATGAATGAGCTGTATTTCCTAAGAAGGAATATGTGAACCATATTAGTGTTTGCATATATATG]


>consensus_11717#1 TTTTTTCTTTTGACCACGGATTTTCTGCTTTGATCGTTTCTTGGGGAGGCGTCGCGTGAT GGGACCTGAAGGACCCTATGAGAACGAAATATTGATGGAAAGTACCACGGGCTAGTTAAG CCCCTGGAAAGTGATTGGAGAACTACCCAATGGAAGAAACGGATTCTCACTTAGTTTCTC CCAGATGGAATGAGCTTTCCGGTTCTGGCCAGTTGTTTCCAAAACATCCTGCTGGAGCTT CACCTTGGAAGATTGTGTGATTAGAACCAGTTGCCCAGTATCACATATTCTTCTGGTGCA TTCTACTTTTTTGCCCGTCTTGCTGTATCTAGTTTTGGGCCAACACCCGTGATATTACCA CCCCGAAATTATGCTAGTGATGAATGAGCTGTATTTCCTAAGAAGGAATATGTGAACCAT ATTAGTGTTTGCATATATATG



consensusID : consensus_11717#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 408
fasta sequence
                              [CATTTACAGGGGATTTTTTTTTTTGACAGGATGTTTTTTAATGTTTTTAAAAGGGGGGGTGAGGGACTGAAGGCCCTAGAGAAGAAATATGAGGAAAGTACAGGGGTAGTAAGCCCTGAAAGTATTGAGAACTCCAAAGGAAGAAAGGTTTTCATTAGTTTTTCAAAATGAAAAGCTTTCGGTTTTGGCAGTTTTTCAAAACATCCTGGTGAGGTTCCCATTGAAGATTGTGTATTAGAACAGTTGCCAGTATCACAAATTTTTTTGTCATTTTACTTTTTGCCAGTCTTGCGGGATTTAGTTTTGGGCAACCCCAGTGATATTACAACCAGAAATTATGCTAGTGATGAATGAGCTGTATTTCCTAAGAAGGAAAATGTGAACAAAATTAGGGTTTGCAAAAAAATG]

[-] EMBL BI305815             [CATTTACAGGGGATTTTTTTTTTTGACAGGATGTTTTTTAATGTTTTTAAAAGGGGGGGTGAGGGACTGAAGGCCCTAGAGAAGAAATATGAGGAAAGTACAGGGGTAGTAAGCCCTGAAAGTATTGAGAACTCCAAAGGAAGAAAGGTTTTCATTAGTTTTTCAAAATGAAAAGCTTTCGGTTTTGGCAGTTTTTCAAAACATCCTGGTGAGGTTCCCATTGAAGATTGTGTATTAGAACAGTTGCCAGTATCACAAATTTTTTTGTCATTTTACTTTTTGCCAGTCTTGCGGGATTTAGTTTTGGGCAACCCCAGTGATATTACAACCAGAAATTATGCTAGTGATGAATGAGCTGTATTTCCTAAGAAGGAAAATGTGAACAAAATTAGGGTTTGCAAAAAAATG]
[-] EMBL BI306452             [CATTTACAGGGGATTTTTTTTTTTGACAGGATGTTTTTTAATGTTTTTGAAAGGGGGGGTGAGGGGTTGAAGGCCCTAAAGAAGAAATATGAGGAAAGTCCAGGGGTAGTAAGCCCTGAAAGTATTGAGAACTCCAAAGGAAGAAAGGTTTTCATTAGTTTTTCAAAAAGAAAAGCTTTCGGTTTTGGCAGTTTTTTAAAACATCCTGGTGAGCTTCCCATTGAAGATTGGGGATTAAAACAGTTGCCAGGATCACAAATTTTTTTGTCATTTTACTTTTTGCCAGTTTTGGGGGATTTAGTTTTGGGCAACCCCAGTGATATTTCAACCAGAAATTATGCTAGGGAAGAATGAGCTGTATTTCCTAAAAAGGAAAATGTGGACAAAATTAGGGTTTGGAAAAAAATG]


>consensus_11717#2 CATTTACAGGGGATTTTTTTTTTTGACAGGATGTTTTTTAATGTTTTTAAAAGGGGGGGT GAGGGACTGAAGGCCCTAGAGAAGAAATATGAGGAAAGTACAGGGGTAGTAAGCCCTGAA AGTATTGAGAACTCCAAAGGAAGAAAGGTTTTCATTAGTTTTTCAAAATGAAAAGCTTTC GGTTTTGGCAGTTTTTCAAAACATCCTGGTGAGGTTCCCATTGAAGATTGTGTATTAGAA CAGTTGCCAGTATCACAAATTTTTTTGTCATTTTACTTTTTGCCAGTCTTGCGGGATTTA GTTTTGGGCAACCCCAGTGATATTACAACCAGAAATTATGCTAGTGATGAATGAGCTGTA TTTCCTAAGAAGGAAAATGTGAACAAAATTAGGGTTTGCAAAAAAATG



consensusID : consensus_11717#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 386
fasta sequence
                              [GATTGTNCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTAGTGTATGAGGAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGTGGTGAGACCAGACAATGTCAAAATTGATGCTCAGGATGTTACAGGGGCAAAGATTAAAGTTAAATTGTCAGGTCTGTCTGCAAGAGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTCTTTGACAGGATGTCTCTTGATGTTCTTGAGAGCGTGCGTGAGGGACTGAAGGTTTGTAAAAACGTCATTATAGTGCAAAATAATGAGATTGCATCGAAATTCTATCTGATAGCAGTTGTTAATGCTAGAACTGTTTAATAACATATTATTCCTTTGTNTTGAA]

[+] EMBL AU069212             [GATTGTNCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTAGTGTATGAGGAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGTGGTGAGACCAGACAATGTCAAAATTGATGCTCAGGATGTTACAGGGGCAAAGATTAAAGTTAAATTGTCAGGTCTGTCTGCAAGAGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTCTTTGACAGGATGTCTCTTGATGTTCTTGAGAGCGTGCGTGAGGGACTGAAGGTTTGTAAAAACGTCATTATAGTGCAAAATAATGAGATTGCATCGAAATTCTATCTGATAGCAGTTGTTAATGCTAGAACTGTTTAATAACATATTATTCCTTTGTNTTGAA]


>consensus_11717#3 GATTGTNCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTAGTGTATGAGGA AGGCTGCTTATCATTCCCTGGGATATATGCCAATGTGGTGAGACCAGACAATGTCAAAAT TGATGCTCAGGATGTTACAGGGGCAAAGATTAAAGTTAAATTGTCAGGTCTGTCTGCAAG AGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTCTTTGACAGGATGTCTCT TGATGTTCTTGAGAGCGTGCGTGAGGGACTGAAGGTTTGTAAAAACGTCATTATAGTGCA AAATAATGAGATTGCATCGAAATTCTATCTGATAGCAGTTGTTAATGCTAGAACTGTTTA ATAACATATTATTCCTTTGTNTTGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      TCGCTGCCGCGTGCGGGGGAAAAAATCGTCGACTCCCCCACCACCATGGCCGCGCGCCTT 60
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      CACCTCCGCCTCGGCCCCCGCCTCCGCGGGTTCGCGTCCTCCTTCGCCCCCCTCCTCGCC 120
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      GCGCACCCCAGAGCGCTGCCCCTCTCCCGCATGGGCTCGGTGGCGCCTCTCGCGGCGGCA 180
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      CGCGCCCGCCGCGGCTTCGGTTCCGCCGTCGCCACCGCGCCGCCGGCCGAGGACGAGGAC 240
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      TTCGCCACAGCTGCTGACCTCCAGTTCGAGCCGCCGCTCAAGGTCGTGAAGTACCCCGAC 300
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      CCAATCCTACGGGCTCGCAACAAGCGCATCAACACCTTCGATGACAACCTCCGCAGCCTC 360
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      ACTGATGAGATGTTCGACGTTATGTACAAGACTGATGGAATTGGTCTCTCTGCACCACAA 420
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      GTTGGGGTGAATGTACAGCTTATGGTATTTAATCCAGCTGGTGTGAAGGGAGAAGGAGAG 480
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      GAGATTGTCCTTGTCAACCCGGTTGTATACAAAATGTCGAAGAGATTGTTAGTGTATGAG 540
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      GAAGGCTGCTTATCATTCCCTGGGATATATGCCAATGTGGTGAGACCAGACAATGTCAAA 600
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      ------------------------------------------------------------
consensus_11717#2      ------------------------------------------------------------
consensus_11717#0      ATTGATGCTCAGGATGTTACAGGGGCAAAGATTAAAGTTAAATTGTCAGGTCTGTCTGCA 660
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      -------------------------------------TTTTTTCTTTTGACCACGGATTT 23
consensus_11717#2      ------------------------CATTTACAGGGGATTTTTTTTTTTGAC--AGGATGT 34
consensus_11717#0      AGAGTTTTCCAACATGAATTTGATCATTTACAGGGGATTCTTTTCTTTGAC--AGGATGT 718
consensus_11717#3      ------------------------------------------------------------
                                                                                   

consensus_11717#1      TCTGCTTTGATCGTTTCTTGGGGAGGCGTCGCGTGATGGGACCTGAAGGACCCTATGAGA 83
consensus_11717#2      T----TTTTAATGTTTTTAAAAGGGGGG----GTGA--GGGACTGAAGG-CCCTA-GAGA 82
consensus_11717#0      C----TCTTGATGTTCTTGAGAGCGTGC----GTGA--GGGACTGAAGG-ACCTA-GAGA 766
consensus_11717#3      ----------------------------------GATTGTNCTTGTCAACCCGGTTGTAT 26
                                                         **  *    **      *    *   

consensus_11717#1      ACGAAATATTGATGGAAAGTACCACGGGCTAGTTAAGCCCCTGGAAAGTGATTGGAGAAC 143
consensus_11717#2      A-GAAATATGA--GGAAAGTACA--GGGGTAGT-AAGCCCT--GAAAGTATT--GAGAAC 132
consensus_11717#0      A-GAAATATGA--GGAAAGTACA--GGGCTAGT-AAGCCCT--GAAAGTATT--GAGAAC 816
consensus_11717#3      ACAAAATGTCGAAGAGATTGTTAGTGTATGAGGAAGGCTGCTTATCATTCCCTGGGATAT 86
                       *  **** *    *  *        *    **  * **        * *     *   * 

consensus_11717#1      TACCCAATG-GAAGAAACGGATTCTCACTTAGTTTC---TCCCAGATGGAATGAGCTTTC 199
consensus_11717#2      T--CCAAAG-GAAGAAA--GGTTTTCA-TTAGTTT----TTCAAAATGAAA--AGCTTTC 180
consensus_11717#0      TA--CCAAG-GAAGAAA--GGATCTCA-TTAGTTT----CTCAAGATGAAT--AGCTTTC 864
consensus_11717#3      ATGCCAATGTGGTGAGACCAGACAATGTCAAAATTGATGCTCAGGATGTTACAGGGGCAA 146
                           * * * *  ** *             *  **      *   ***      *     

consensus_11717#1      CGGTTCTGGCCAGTTGTTTCCAAAACATCCTGCTGGAGCTTCACCTTGGAAGATTGTGTG 259
consensus_11717#2      -GGTTTTGGC-AGTT--TTTCAAAACATCCTGGTGAGGTTCC--CATTGAAGATTGTGT- 233
consensus_11717#0      -GGTTCTGGC-AGTT--TTTCAAAACATCCTGCTGAGCTTCA--CATTGAAGATTGTGT- 917
consensus_11717#3      AGATTAAAGTTAAAT--TGTCAGGTCTGTCTGCAAGAGTTTTCCAACATGAATTTGATCA 204
                        * **   *  *  *  *  **   *   ***       *          *  ***    

consensus_11717#1      ATTAGAACCAGTTGCCCAGTATCACATATTCTTCTGGTGCATTCTACTTTTTTGCCCGTC 319
consensus_11717#2      ATTAGAAC-AGTTGCC-AGTATCACAAATTTTTTTGT--CATTTTACTTTTT-GCCAGTC 288
consensus_11717#0      ATTAGAAC-AGTTGCC-AGTATCACATATTCTTCTGT--CATTCTACTTTTT-GCCAGTC 972
consensus_11717#3      TTTACAGGGGATTCTTTTCTTTGACAGGATGTCTCTT---GATGTTCTTGAGAGCGTGCG 261
                        *** *     **      * * ***   * *          * * ***    **  *  

consensus_11717#1      TTGCTGTATCTAGTTTTGGGCCAACACCCGTGATAT-TACCACCCCGAAATTATGCTAGT 378
consensus_11717#2      TTGCGGGATTTAGTTTTGGGC-AACCCCAGTGATAT-TACAACCA-GAAATTATGCTAGT 345
consensus_11717#0      TTGCTGTATCTAGTTTTGTGC-AACACCAGTGATAT-TACAACCA-GAAATTATGCTAGT 1029
consensus_11717#3      TGAGGGACTGAAGGTTTGTAAAAACGTCATTATAGTGCAAAATAATGAGATTGCATCGAA 321
                       *    *  *  ** ****    ***  *  *    *  *  *    ** ***        

consensus_11717#1      GATGAATGAGCT-GTATTTCCTAAGAAGGAATATGTGAACCATATTAGTGTTTGCATATA 437
consensus_11717#2      GATGAATGAGCT-GTATTTCCTAAGAAGGAAAATGTGAACAAAATTAGGGTTTGCAAAAA 404
consensus_11717#0      GATGAATGAGCT-GTATTTCCTAAGAAGGAATATGTGAACCATATTAGTGTTTGCATATA 1088
consensus_11717#3      ATTCTATCTGATAGCAGTTGTTAATGCTAGAACTGTTTAATAACATATTATTCCTTTGTN 381
                         *  **  * * * * **  ***      *  ***  *  *   **   **        

consensus_11717#1      TATG- 441
consensus_11717#2      AATG- 408
consensus_11717#0      TATG- 1092
consensus_11717#3      TTGAA 386
                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)