cluster # 11725

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Oryza sativa
cluster # 11725 cluster # 11725 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11725#0 length = 1669 sequences # 9
consensusID : consensus_11725#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1669
fasta sequence
                              [CATCCCTCCAACACTAACCTCGACGGCGGCGGCGGCGGCGGAGGGAGAGGATGGAGGCGATGGCCGGTGAGCTGGAGAGGCTGCGGGCGGAGAGGGAAGAGCTCGATAGCCGCATACGCCTGCTAGAGTCGCAGCTCGGGGCTAGCCCTACGCCCGCGGGAGAGGGCGACGCGGCGGGGACAGGGGCAGGAGGCGGAGGCGGCGGTGGCGGCGCCACCGCGTGCCCCATACGCCGCCGTGGGAATGGGTTCGCCGCCGCCGATGGCCTCCCGGCCGATATGATCTACCGGTACAGCCGCCACCTCCTCCTCCCGGACTTCGGGGTCGAAGGCCAGCGTAAGCTCTCGCAGTCATCGATTTTGGTGGTGGGCGCTGGAGGATTGGGCTCGCCCGTGGCACTGTACCTAGCAGCTTGTGGTGTTGGTTGCTTGGGCATTGTTGATGGAGATGATGTTGAGCTTAATAACCTTCACCGACAGATAATCCACAAAGAAGCATTTGTTGGGAAATCAAAGGTGAAGTCAGCGGCTGACGCCTGCCGTGAGATTAATTCGTCTATCAACGTGATGGAGTACCATCATACTTTGAAACCTTCCAATGCTTTGGAAATCGTGAGAAAATATGATATAGTTGTAGATGCCACGGACAATCTTCCTACTCGATACATGATCAGTGACTGTTGTGTGTTGCTGAATAAGCCTCTTATATCTGGTGCAGCCTTAGGTTTGGAAGGACAGTCCATGCTATCGATGCCTTTTCCCAAATCCACCACCAGTGGCAGCCTGCCAGAGATGCTCAGACAGTGGAGTTCTTGGGGTTGTTCCCGGAGTGATTGGCTGCCTGCAAGCTCTAGAGGCTATAAAGGTTGCTACTGATGTTGGTGAACCCCTAAGTGGAAGAATGCTACTCTTTGAC-GCTCTATCTGCTCGTATCAGAATTGTCAAGATTCGAGGAAGCTCGACTGTTTGCACGGTTTGTGGAGAAAATTCAGCTTTTACTCAAGATGATTTTCAGAAGTTTGATTATGAGAACTTCACGCAGTCTCCAATGTCTGATAAGTCAGCTCCAAGTTTGGACATACTTCCAGGAAGTGCCCGTGTCACTTGTAAAGAATACAAAAGGCTTGTTGATAATGGTGAACGCCATCTTCTGTTGGATGTACGACCTGCACATCACTTCCAAATTGCTTCTGTTTCTCAATCTCTGAACATCCCGCTCTCCGAGTTGGAGGAGAAGCTTCAGATGCTCGAGACCTCGTTGAAGGACACGACGGACGCCTCCTCATCAGACAAACCGCCTTCCCTTTATGTTGTTTGCCGAAGAGGCAATGACTCGCAAATAGCCGTTCAGCTTCTAC-GGGAGAAGGGGTTTCTTTCTGCAAAGGACATAATCGGTGGCTTGCAGTCCTGGGCACAAGATGTAGACCCTGATTTCCCCGTGTACTAGTGAAATGGATATAGTGGTAGTCACATTTGAGATTACATGCTCAATTTTTAAATCTGACACGAGATTTTTACTGGCTTGTCATGAGTATGTAAAATATAGAACCGTTAACTTTTCATCCTTGACCACCCTAATAGAGTGGTTTGGGATGACATGTTAATTGACGGAGCAATATGGCTTAAGGCTGAACTTTTTTATCAAATATTTTGAACTAGTAATAAATTCC]

[+] EMBL AK065368             [CATCCCTCCAACACTAACCTCGACGGCGGCGGCGGCGGCGGAGGGAGAGGATGGAGGCGATGGCCGGTGAGCTGGAGAGGCTGCGGGCGGAGAGGGAAGAGCTCGATAGCCGCATACGCCTGCTAGAGTCGCAGCTCGGGGCTAGCCCTACGCCCGCGGGAGAGGGCGACGCGGCGGGGACAGGGGCAGGAGGCGGAGGCGGCGGTGGCGGCGCCACCGCGTGCCCCATACGCCGCCGTGGGAATGGGTTCGCCGCCGCCGATGGCCTCCCGGCCGATATGATCTACCGGTACAGCCGCCACCTCCTCCTCCCGGACTTCGGGGTCGAAGGCCAGCGTAAGCTCTCGCAGTCATCGATTTTGGTGGTGGGCGCTGGAGGATTGGGCTCGCCCGTGGCACTGTACCTAGCAGCTTGTGGTGTTGGTTGCTTGGGCATTGTTGATGGAGATGATGTTGAGCTTAATAACCTTCACCGACAGATAATCCACAAAGAAGCATTTGTTGGGAAATCAAAGGTGAAGTCAGCGGCTGACGCCTGCCGTGAGATTAATTCGTCTATCAACGTGATGGAGTACCATCATACTTTGAAACCTTCCAATGCTTTGGAAATCGTGAGAAAATATGATATAGTTGTAGATGCCACGGACAATCTTCCTACTCGATACATGATCAGTGACTGTTGTGTGTTGCTGAATAAGCCTCTTATATCTGGTGCAGCCTTAGGTTTGGAAGGACAGTCCATGCTATCGATGCCTTTTCCCAAATCCACCACCAGTGGCAGCCTGCCAGAGATGCTCAGACAGTGGAGTTCTTGGGGTTGTTCCCGGAGTGATTGGCTGCCTGCAAGCTCTAGAGGCTATAAAGGTTGCTACTGATGTTGGTGAACCCCTAAGTGGAAGAATGCTACTCTTTGAC GCTCTATCTGCTCGTATCAGAATTGTCAAGATTCGAGGAAGCTCGACTGTTTGCACGGTTTGTGGAGAAAATTCAGCTTTTACTCAAGATGATTTTCAGAAGTTTGATTATGAGAACTTCACGCAGTCTCCAATGTCTGATAAGTCAGCTCCAAGTTTGGACATACTTCCAGGAAGTGCCCGTGTCACTTGTAAAGAATACAAAAGGCTTGTTGATAATGGTGAACGCCATCTTCTGTTGGATGTACGACCTGCACATCACTTCCAAATTGCTTCTGTTTCTCAATCTCTGAACATCCCGCTCTCCGAGTTGGAGGAGAAGCTTCAGATGCTCGAGACCTCGTTGAAGGACACGACGGACGCCTCCTCATCAGACAAACCGCCTTCCCTTTATGTTGTTTGCCGAAGAGGCAATGACTCGCAAATAGCCGTTCAGCTTCTAC GGGAGAAGGGGTTTCTTTCTGCAAAGGACATAATCGGTGGCTTGCAGTCCTGGGCACAAGATGTAGACCCTGATTTCCCCGTGTACTAGTGAAATGGATATAGTGGTAGTCACATTTGAGATTACATGCTCAATTTTTAAATCTGACACGAGATTTTTACTGGCTTGTCATGAGTATGTAAAATATAGAACCGTTAACTTTTCATCCTTGACCACCCTAATAGAGTGGTTTGGGATGACATGTTAATTGACGGAGCAATATGGCTTAAGGCTGAACTTTTTTATCAAATATTTTGAACTAGTAATAAATTCC]
[+] EMBL CB662249             [                      ACGGCGGCGGCGGCGGCGGAGGGAGAGGATGGAGGCGATGGCCGGTGAGCTGGAGAGGCTGCGGGCGGAGAGGGAAGAGCTCGATAGCCGCATACGCCTGCTAGAGTCGCAGCTCGGGGCTAGCCCTACGCCCGCGGGAGAGGGCGACGCGGCGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB643674             [                      ACGGCGGCGGCGGCGGCGGAGGGAGAGGATGGAGGCGATGGCCGGTGAGCTGGAGAGGCTGCGGGCGGAGAGGGAAGAGCTCGATAGCCGCATACGCCTGCTAGAGTCGCAGCTCGGGGCTAGCCCTACGCCCGCGGGAGAGGGCGACGCGGCGGGGACAGGGGCAGGAGGCGGAGGCGGCGGTGGCGGCGCCACCGCGTGCCCCATACGCCGCCGTGGGAATGGGTTCGCCGCCGCCGATGGCCTCCCGGCCGATATGATCTACCGGTACAGCCGCCACCTCCTCCTCCCGGACTTCGGGGTCGAAGGCCAGCGTAAGCTCTCGCAGTCATCGATTTTGGTGGTGGGCGCTGGAGGATTGGGCTCGCCCGTGGCACTGTACCTATCACCTTGTGGTGTTGGTTGCTTGGGCATTGTTGATGGACATGATGTTGATCTTAATGACCTTCACCGACAGATAATCCACAAAGAAGCATTTGTTGGGAAATCAAAGGTGAAGTCTGCGGCTGACGCCTGCCGTGAGATTATTTCGTCTATCATCGTGATGGAGTACCATCATACTTTGAAACCTTCCAATGCTTTGGACATCGTGAGAAAATATGATATAGTTGTAGATGCCACGGACAATCTTCCTACTCGATACATGATCAGCGACTGTTGTGCGTTGCTGAATAACCCTCTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB643635             [                                          GGGAGAGGATGGAGGCGATGGCCGGTGAGCTGGAGAGGCTGCGGGCGGAGAGGGAACAGCTCGATAGCCGCATACGCCTGCTAGAGTCGCAGCTCGGGGCTAGCCCTACGCCCGCGGGAGAGGGCGACGCGGCGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB662250             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGCTGCCTGCAAGCTCTAGAGGCTATAAAGGTTGCTACTGATGTTGGTGAACCCCTAAGTGGAAGAATGCTACTCTTTGAC GCTCTATCTGCTCGTATCAGAATTGTCAAGATTCGAGGAAGCTCGACTGTTTGCACGGTTTGTGGAGAAAATTCAGCTTTTACTCAAGATGATTTTCAGAAGTTTGATTATGAGAACTTCACGCAGTCTCCAATGTGTGATAAGTCAGCTCCAAGTTTGGACATACTTCCAGGAAGTGCCCGTGTCACTTGTAAAGAATACAAAAGGCTTGTTGATAATGGTGAACGCCATCTTCTGTTGGATGTACGACCTGCACATCACTTCCAAATTGCTTCTGTTTCTCAATCTCTGAACATCCCGCTCTCCGAGTTGGAGGAGAAGCTTCAGATGCTCGAGACCTCGTTGAAGGACACGACGGACGCCTCCTCATCAGACAAACCGCCTTCCCTTTATGTTGTTTGCCGAAGAGGCAATGACTCGCAAATAGCCGTTCAGCTTCTAC GGGAGAAGGGGTTTCTTTCTGCAAAGGACATAATCGGTGGCTTGCAGTCCTGGGCACAAGATGTAGACCCTGATTTCCCCGTGTACTAGTGAAA                                                                                                                                                                                                                          ]
[-] EMBL CB643675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGCCTGCAAGCTCTAGAGGCTATAAAGGTTGCTACTGATGTTGGTGAACCCCTAAGTGGAAGAATGCTACTCTTTGAC GCTCTATCTGCTCGTATCAGAATTGTCAAGATTCGAGGAAGCTCGACTGTTTGCACGGTTTGTGGAGAAAATTCAGCTTTTACTCAAGATGATTTTCAGAAGTTTGATTATGAGAACTTCACGCAGTCTCCAATGTCTGATAAGTCAGCTCCAAGTTTGGACATACTTCCAGGAAGTGCCCGTGTCACTTGTAAAGAATACAAAAGGCTTGTTGATAATGGTGAACGCCATCTTCTGTTGGATGTACGACCTGCACATCACTTCCAAATTGCTTCTGTTTCTCAATCTCTGAACATCCCGCTCTCCGAGTTGGAGGAGAAGCTTCAGATGCTCGAGACCTCGTTGAAGGACACGACGGACGCCTCCTCATCAGACAAACCGCCTTCCCTTTATGTTGTTTGCCGAAGAGGCAATGACTCGCAAATAGCCGTTCAGCTTCTAC GGGAGAAGGGGTTTCTTTCTGCAAAGGACATAATCGGTGGCTTGCAGTCCTGGGCACAAGATGTAGACCCTGATTTCCCCGTGTACTAGTGAAATGGATATAGTGGTAGTCACATTTGAGATTACATGCTCAATTTTTAAATCTGACACGAGATTTTTACTGGCTTGTCATGAGTATGTAAAATATAGAACCGTTAACTTTTCATCCTTGACCACCCTAATAGAGTGGTTTGGGATGACATGTTAATTGACGGAGCAATATGGCTTAAGGCTGAAC                                    ]
[-] EMBL CB643636             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGCCTGCAAGCTCTAGAGGCTATAAAGGTTGCTACTGATGTTGGTGAACCCNTAAGTGGAAGAATGCTACTCTTTGAC GCTCTATCTGCTCGTATCAGAATTGTCAAGATTCGAGGAAGCTCGACTGTTTGCACGGTTTGTGGAGAAAATTCAGCTTTTACTCAAGATGATTTTCAGAAGTTTGATTATGAGAACTTCACGCAGTCTCCAATGTCTGATAAGTCAGCTCCAAGTTTGGACATACTTCCAGGAAGTGCCCGTGTCACTTGTAAAGAATACAAAAGGCTTGTTGATAATGGTGAACGCCATCTTCTGTTGGATGTACGACCTGCACATCACTTCCAAATTGCTTCTGTTTCTCAATCTCTGAACATCCCGCTCTCCGAGTTGGAGGAGAAGCTTCAGATGCTCGAGACCTCGTTGAAGGACACGACGGACGCCTCCTCATCAGACAAACCGCCTTCCCTTTATGTTGTTTGCCGAAGAGGCAATGACTCGCAAATAGCCGTTCAGCTTCTAC GGGAGAAGGGGTTTCTTTCTGCAAAGGACATAATCGGTGGCTTGCAGTCCTGGGCACAAGATGTAGACCCTGATTTCCCCGTGTACTAGTGAAATGGATATAGTGGTAGTCACATTTGAGATTACATGCTCAATTTTTAAATCTGACACGAGATTTTTACTGGCTTGTCATGAGTATGTAAAATATAGAACCGTTAACTTTTCATCCTTGACCACCCTAATAGAGTGGTTTGGGATGACATGTTAATTGACGGAGCAATATGGCTTAAGGCTGAACTTTTTTATCAAAaaaaaaag                ]
[-] EMBL CB660199             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGTTGCTACTGATGTTGGTGAACCCCTAAGTGGAAGAATGCTACTC TTGACGGCTCTATCTGCTCGTATCAGAATTGTCAAGATTCGAGGAAGCTCGACTGTTTGCACGGTTTGTGGAGAAAATTCAGCTTTTACTCAAGATGATTTTCAGAAGTTTGATTATGAGAACTTCACGCAGTCTCCAATGTCTGATAAGTCAGCTCCAAGTTTGGACATACTTCCAGGAAGTGCCCGTGTCACTTGTAAAGAATACAAAAGGCTTGTTGATAATGGTGAACGCCATCTTCCGTTGGATGTACGACCTGCACATCACTTCCAAATTGCTTCTGTTTCTCAATCTCTGAACATCCCGCTCTCCGAGTTGGAGGAGAAGCTTCAGATGCTCGAGACCTCGTTGAAGGACCAGACGGACGCCTCCTCATCAGCCAAACCGCCTTCCCTTTATGTTGTTTGCCGAAGAGGCAATGACTCGCCAATAGCCGTTCAGCTTCGACAGGGAGAAGGGGTTTCTTTCCGCAAAGATCATAATCGGTGGGTGGCAGTCGTGGGCGCAAAACGCAGTCCCTGATTTCCCCGTGTggcacgga                                                                                                                                                                                                                            ]
[-] EMBL CB660200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTACTGATGTTGGTGAACCCCTAAGTGGAAGAATGCTACTCTTTGAC GCTCTATCTGCTCGTATCAGAATTGTCAAGATTCGAGGAAGCTCGACTGTTTGCACGGTTTGTGGAGAAAATTCAGCTTTTACTCAAGATGATTTTCAGAAGTTTGATTATGAGAACTTCACGCAGTCTCCAATGTCTGATAAGTCAGCTCCAAGTTTGGACATACTTCCAGGAAGTGCCCGTGTCACTTGTAAAGAATACAAAAGGCTTGTTGATAATGGTGAACGCCATCTTCTGTTGGATGTACGACCTGCACATCACTTCCAAATTGCTTCTGTTTCTCAATCTCTGAACATCCCGCTCTCCGAGTTGGAGGAGAAGCTTCAGATGCTCGAGACCTCGTTGAAGGACACGACGGACGCCTCCTCATCAGACAAACCGCCTTCCCTTTATGTTGTTTGCCGAAGAGGCAATGACTCGCAAATAGCCGTTCAGCTTCTAC GGGAGAAGGGGTTTCTTTCTGCAAAGGACATAATCGGTGGCTTGCAGTCCTGGGCACAAGATGTAGACCCTGATTTCCCCGTGTACTAGTGAAATGGATATAGTGGTAGTCACATTTGAGATTACATGCTCAATTTTTAAATCTGACACGAGATTTTTACTGGCTTGTCATGAGTATGTAAAATATAGAACCGTTAACTTTTCATCCTTGACCACCCTAATAGAGTGGTTGGGGATGACATGTTAATTGACGGAGCAATATGGC                                                ]




>consensus_11725#0
CATCCCTCCAACACTAACCTCGACGGCGGCGGCGGCGGCGGAGGGAGAGGATGGAGGCGA
TGGCCGGTGAGCTGGAGAGGCTGCGGGCGGAGAGGGAAGAGCTCGATAGCCGCATACGCC
TGCTAGAGTCGCAGCTCGGGGCTAGCCCTACGCCCGCGGGAGAGGGCGACGCGGCGGGGA
CAGGGGCAGGAGGCGGAGGCGGCGGTGGCGGCGCCACCGCGTGCCCCATACGCCGCCGTG
GGAATGGGTTCGCCGCCGCCGATGGCCTCCCGGCCGATATGATCTACCGGTACAGCCGCC
ACCTCCTCCTCCCGGACTTCGGGGTCGAAGGCCAGCGTAAGCTCTCGCAGTCATCGATTT
TGGTGGTGGGCGCTGGAGGATTGGGCTCGCCCGTGGCACTGTACCTAGCAGCTTGTGGTG
TTGGTTGCTTGGGCATTGTTGATGGAGATGATGTTGAGCTTAATAACCTTCACCGACAGA
TAATCCACAAAGAAGCATTTGTTGGGAAATCAAAGGTGAAGTCAGCGGCTGACGCCTGCC
GTGAGATTAATTCGTCTATCAACGTGATGGAGTACCATCATACTTTGAAACCTTCCAATG
CTTTGGAAATCGTGAGAAAATATGATATAGTTGTAGATGCCACGGACAATCTTCCTACTC
GATACATGATCAGTGACTGTTGTGTGTTGCTGAATAAGCCTCTTATATCTGGTGCAGCCT
TAGGTTTGGAAGGACAGTCCATGCTATCGATGCCTTTTCCCAAATCCACCACCAGTGGCA
GCCTGCCAGAGATGCTCAGACAGTGGAGTTCTTGGGGTTGTTCCCGGAGTGATTGGCTGC
CTGCAAGCTCTAGAGGCTATAAAGGTTGCTACTGATGTTGGTGAACCCCTAAGTGGAAGA
ATGCTACTCTTTGACGCTCTATCTGCTCGTATCAGAATTGTCAAGATTCGAGGAAGCTCG
ACTGTTTGCACGGTTTGTGGAGAAAATTCAGCTTTTACTCAAGATGATTTTCAGAAGTTT
GATTATGAGAACTTCACGCAGTCTCCAATGTCTGATAAGTCAGCTCCAAGTTTGGACATA
CTTCCAGGAAGTGCCCGTGTCACTTGTAAAGAATACAAAAGGCTTGTTGATAATGGTGAA
CGCCATCTTCTGTTGGATGTACGACCTGCACATCACTTCCAAATTGCTTCTGTTTCTCAA
TCTCTGAACATCCCGCTCTCCGAGTTGGAGGAGAAGCTTCAGATGCTCGAGACCTCGTTG
AAGGACACGACGGACGCCTCCTCATCAGACAAACCGCCTTCCCTTTATGTTGTTTGCCGA
AGAGGCAATGACTCGCAAATAGCCGTTCAGCTTCTACGGGAGAAGGGGTTTCTTTCTGCA
AAGGACATAATCGGTGGCTTGCAGTCCTGGGCACAAGATGTAGACCCTGATTTCCCCGTG
TACTAGTGAAATGGATATAGTGGTAGTCACATTTGAGATTACATGCTCAATTTTTAAATC
TGACACGAGATTTTTACTGGCTTGTCATGAGTATGTAAAATATAGAACCGTTAACTTTTC
ATCCTTGACCACCCTAATAGAGTGGTTTGGGATGACATGTTAATTGACGGAGCAATATGG
CTTAAGGCTGAACTTTTTTATCAAATATTTTGAACTAGTAATAAATTCC
clustalw multiple alignements is not computed in this case