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Oryza sativa
cluster # 11728 cluster # 11728       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11728#0 length = 1974 sequences # 8  
consensus_11728#1 length = 507 sequences # 1  

consensusID : consensus_11728#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1974
fasta sequence
                              [GAGACGCATGCGACGCGGGCGGAGAGGAGACACGACCCACCCCCGCCACCGCCCGGAGGAGCCACGAGCGAGCAAGCCCTAGCCCCCGGGCGCGAGGGCGGCGGCCGCTGCTGCGTCGACCGTCTCTCTCTCGTGCTCCGGCGCTGCTCGTCGTCTCCTTGGCCGAATCCAATCCGGGAGGTGCGGGGGCCGTTCCGATCGAGTCGGTCCTGCCATGTCGACCAAGAGGGTTCTTTGCAAGTTCTTCATGCATGGAGCTTGCTTGAAAGGAGAGTACTGTGAGTTCTCCCATGATTGGAATGATCAACCAAACAATGTTTGCACGTTCTACCAGAAAGGTTCATGCTCGTATGGTAGCCGTTGCCGATATGACCATGTCAAAGTTTCTCGTAACCCCACAGTGGCTCCACCACCAAGCTCAAGTACTACAACACGTGCATCTAGTTCTCTTCAGCCTTTGAGTTTCGGGCGCCCTCACCATGTGGGGTACCAAGCAGATTCAAGCAACCCAAGGCAACAGATATCTATGGATGTGCTGGCACATTCTGGAAGTAAGCCTGTATGGAGAAATGATTTTCAACATGAAAGTGTACTTGAGGATGGGATTGACTGGTCAATAAGTCCAACTGTGCAAAACCAGACAACCTTGAGTCCTGCTGATCTGCCAATCTGTTCTTTTGCTGCTGGTGGTAATTGTCCTTATGGGGAAGAGTGCCCTCAGATGCATGGAGATCTGTGCAC-AACCTGTGGGAAAATGTGCTTACATCCTTATCGTCCTGATGAGAGGGAGGAACATACCAAGCTATGTGAGAAAAACCACAAGCGTCTTGAGTCTTTGAAACGTAGCCAAGAGATAGAATGCAGTGTCTGCCTGGACCGTGTGCTCTCAAAGCCTACTGCTGCTGAAAGGAAGTTTGGACTCTTATCTGAGTGTGATCATCCCTTCTGTATTTCATGTATTAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTCAGCACTGAGGGCTTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCTTTGGTACTTTTCGAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAAGTCTATTGACTGCAAGTACTTCGATTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTGTTTCTACAAGCATGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGACATCTTGATGCTGACGATGGAAGTACAGTGATTGCCAAAAATATTAGGTTGTCGGACTTCCTCAGTCGGTTACATCTTTAGGGACCAGTGACTGTATATATGTCAAATAATTATTGAAGTTCGCAG-CAGGCCTCCTGGAGGAAGCA-ATCGTGATCTGAGGACAAGGAAAACAGAAGTTTTGTCGCAAATACGCTCAATAGTCCAAACGTTAGAACTAAACTGTTGAAAAACTTTGCCATATCCACTCATCTTGCCTCCTGGCCAGCAGTGATTCAGTAAACATTCACTGGCCATCGTGCCAAAGCACAGGTGTATAATACTATTCCTTCCTCAATGCTCTCTACTGAGGGAAGGCTGCCTGCACCCAACCACAGGCCACCTGATGCCGTGTGATTGTACTTGTATGAAAAGAAGGAACTAGAAAAAAAGAAAGAGAGGATGAAACAAAGATTACTCTTCAGACTACACATTGATGAATCCGCATTAGGACGAGGTCCAGATGCTTAAAGCCGTTTGGTTGTCTTGGTCTGAGGGAGAGAAGGAAAACAAGAAAGGAAACAAATCACATTCTTTATAAACATCAGTGTTGAATGTGGCATGTGCTAATGTGCTATATATATCTGATGTTGATATGCCCTGTACATGTTCCTGGAACAGGTTGGCGCTTTTGCTCAGGAAACAGGAACGTCTGCCTATTTGTGGTGGCTTTTTTTTGTGTGAAAAAAAAAAAAAAA]

[+] EMBL AK120250             [GAGACGCATGCGACGCGGGCGGAGAGGAGACACGACCCACCCCCGCCACCGCCCGGAGGAGCCACGAGCGAGCAAGCCCTAGCCCCCGGGCGCGAGGGCGGCGGCCGCTGCTGCGTCGACCGTCTCTCTCTCGTGCTCCGGCGCTGCTCGTCGTCTCCTTGGCCGAATCCAATCCGGGAGGTGCGGGGGCCGTTCCGATCGAGTCGGTCCTGCCATGTCGACCAAGAGGGTTCTTTGCAAGTTCTTCATGCATGGAGCTTGCTTGAAAGGAGAGTACTGTGAGTTCTCCCATGATTGGAATGATCAACCAAACAATGTTTGCACGTTCTACCAGAAAGGTTCATGCTCGTATGGTAGCCGTTGCCGATATGACCATGTCAAAGTTTCTCGTAACCCCACAGTGGCTCCACCACCAAGCTCAAGTACTACAACACGTGCATCTAGTTCTCTTCAGCCTTTGAGTTTCGGGCGCCCTCACCATGTGGGGTACCAAGCAGATTCAAGCAACCCAAGGCAACAGATATCTATGGATGTGCTGGCACATTCTGGAAGTAAGCCTGTATGGAGAAATGATTTTCAACATGAAAGTGTACTTGAGGATGGGATTGACTGGTCAATAAGTCCAACTGTGCAAAACCAGACAACCTTGAGTCCTGCTGATCTGCCAATCTGTTCTTTTGCTGCTGGTGGTAATTGTCCTTATGGGGAAGAGTGCCCTCAGATGCATGGAGATCTGTGCAC AACCTGTGGGAAAATGTGCTTACATCCTTATCGTCCTGATGAGAGGGAGGAACATACCAAGCTATGTGAGAAAAACCACAAGCGTCTTGAGTCTTTGAAACGTAGCCAAGAGATAGAATGCAGTGTCTGCCTGGACCGTGTGCTCTCAAAGCCTACTGCTGCTGAAAGGAAGTTTGGACTCTTATCTGAGTGTGATCATCCCTTCTGTATTTCATGTATTAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTCAGCACTGAGGGCTTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCTTTGGTACTTTTCGAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAAGTCTATTGACTGCAAGTACTTCGATTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTGTTTCTACAAGCATGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGACATCTTGATGCTGACGATGGAAGTACAGTGATTGCCAAAAATATTAGGTTGTCGGACTTCCTCAGTCGGTTACATCTTTAGGGACCAGTGACTGTATATATGTCAAATAATTATTGAAGTTCGCAG CAGGCCTCCTGGAGGAAGCA ATCGTGATCTGAGGACAAGGAAAACAGAAGTTTTGTCGCAAATACGCTCAATAGTCCAAACGTTAGAACTAAACTGTTGAAAAACTTTGCCATATCCACTCATCTTGCCTCCTGGCCAGCAGTGATTCAGTAAACATTCACTGGCCATCGTGCCAAAGCACAGGTGTATAATACTATTCCTTCCTCAATGCTCTCTACTGAGGGAAGGCTGCCTGCACCCAACCACAGGCCACCTGATGCCGTGTGATTGTACTTGTATGAAAAGAAGGAACTAGAAAAAAAGAAAGAGAGGATGAAACAAAGATTACTCTTCAGACTACACATTGATGAATCCGCATTAGGACGAGGTCCAGATGCTTAAAGCCGTTTGGTTGTCTTGGTCTGAGGGAGAGAAGGAAAACAAGAAAGGAAACAAATCACATTCTTTATAAACATCAGTGTTGAATGTGGCATGTGCTAATGTGCTATATATATCTGATGTTGATATGCCCTGTACATGTTCCTGGAACAGGTTGGCGCTTTTGCTCAGGAAACAGGAACGTCTGCCTATTTGTGGTGGCTTT                         ]
[+] EMBL CB655768             [                  GCGGAGAGGAGACACGACCCACCCCCGCCACCGCCCGGAGGAGCCACGAGCGAGCAAGCCCTAGCCCCCGGGCGCGAGGGCGGCGGCCGCTGCTGCGTCGACCGTCTCTCTCTCGTGCTCCGGCGCTGCTCGTCGTCTCCTTGGCCGAATCCAATCCGGGAGGTGCGGGGGCCGTTCCGATCGAGTCGGTCCTGCCATGTCGACCAAGAGGGTTCTTTGCAAGTTCTTCATGCATGGAGCTTGCTTGAAAGGAGAGTACTGTGAGTTCTCCCATGATTGGAATGATCAACCAAACAATGTTTGCACGTTCTACCAGAAAGGTTCATGCTCGTATGGTAGCCGTTGCCGATATGACCATGTCAAAGTTTCTCGTAACCCCACAGTGGCTCCACCACCAAGCTCAAGTACTACAACACGTGCATCTAGTTCTCTTCAGCCTTTGAGTTTCGGGCGCCCTCACCATGTGGGGTACCAAGCAGATTCAAGCAACCCAAGGCAACAGATATCTATGGATGTGCTGGCACATTCTGGAAGTAAGCCTGTATGGAGAAATGATTTTCAACATGAAAGTGTACTTGAGGATGGGATTGACTGGTCAATAAGTCCAACTGTGCAAAACCAGACAACCTTGAGTCCTGCTGATCTGCCAATCTGTTCTTTTGCTGCTGGTGGTAATTGTCCTTATGGGGAAGAGTGCCCTCAGATGCATGGAGATCTGTGCAC AACCTGTGGGAAAATGTGCTTACATCCTTATCGTCCTGATGAGAGGGAGGAACATACCAAGCTATGTGAGAAAAACCACAAGCGTCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB001046             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGATCTGTGCACGAACCTGTGGGAAAATGTGCTTACATCCTTATCGTCCTGATGAGAGGGAGGAACATACCAAGCTATGTGAGAAAAACCACAAGCGTCTTGAGTCTTTGAAACGTAGCCAAGAGATAGAATGCAGTGTCTGCCTGGACCGTGTGCTCTCAAAGCCTACTGCTGCTGAAAGGAAGTTTGGACTCTTATCTGAGTGTGATCATCCCTTCTGTATTTCATGTATTAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTCAGCACTGAGGGCTTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB655769             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTATCTGAGTGTGATCATCCCTTCTGTATTTCATGTATTAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTCAGCACTGAGGGCTTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCTTTGGTACTTTTCGAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAAGTCTATTGACTGCAAGTACTTCGATTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTGTTTCTACAAGCATGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGACATCTTGATGCTGACGATGGAAGTACAGTGATTGCCAAAAATATTAGGTTGTCGGACTTCCTCAGTCGGTTACATCTTTAGGGACCAGTGACTGTATATATGTCAAATAATTATTGAAGTTCGCAG CAGGCCTCCTGGAGGAAGCA ATCGTGATCTGAGGACAAGGAAAACAGAAGTTTTGTCGCAAATACGCTCAATAGTCCAAACGTTAGAACTAAACTGTTGAAAAACTTTGCCATATCCACTCATCTTGCCTCCTGGCCAGCAGTGATTCAGTAAACATTCACTGGCCATCGTGCCAAAGCACAGGTGTATAATACTATTCCTTCCTCAATGCTCTCTACTGAGGGAAGGCTGCCTGCACCCAACCACAGGCCACCTGATGCCGTGTGATTGTACTTGTATGAAAAGAAGGAACTAGAAAAAAAGAAAGAGAGGATG                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU065537             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATTCCAAGTGTTCTTTGGTACTTTTCGAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAAGTCTATTGACTGCAAGTACTTCGNNTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTGTTTCTACAAGCATGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGNCATCTTGATGCTGACGGTGGAAGTACAGTGATTGCCAAAAATATTAGGTTGTCGGACTTCCTCAGTCGGTTACATCTTTAGGGCCCAGTNACTGNATATATGTCAAATgta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CA760784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gGGTTGTCGGACTTCCTCAGTCGGGTCCATCCTTAGGGAGCAGTGACCGGATATATGTCAAATAATTATTGAAGTTCCCAGCCAGGCCTCCTGGAGGAAGCACGTCGTGATCTGAGGGCAAGGAAAACAGAAGTTTTGTCGCAAATACGCTCAATAGTCCAAACGTTAGAACTAAACTGTTGAAAAACTTTGCCATATCCACTCATCTTGCCTCCTGGCCAGCAGTGATTCAGTAAACATTCCCTGGCCATCGTGCCAAAGCACAGGTGTATAATACTATTCCTTCCTCAATGCTCTCTACTGAGGGAAGGCTGCCTGCACCCAACCACAGGCCACCTGATGCCGTGTGATTGTACTTGTATGAAAAGAAGGAACTAGAAAAAAAGAAAGAAAGGATGAAACAAAGATTACTTTTCAGACTACACATTGATGAATCCGCCTTAGGACGAGGTCCAGATGCTTAAAACCGTTTGGTTGTTTTGGTTTGAGGGAGAGAAGGAAAACAAGAAAGGAAACCAATCCCCTTCTTTATAAACATCAGTGTTGAATGTGGCCTGCGATAATGTGCTATATATATTTGATGTTGATATGCCCCGTACATGTTCCTGGAACAGGTTGGCGCTTTTGCTCAGGAAACAGGAAAGTTTGCCTATTTGTGGTGGCTTTTTTTTGTGTGAAAAAAAAAAAAAAA]
[+] EMBL AK061908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGACTTCCTCAGTCGGTTACATCTTTAGGGACCAGTGACTGTATATATGTCAAATAATTATTGAAGTTCGCAG CAGGCCTCCTGGAGGAAGCA ATCGTGATCTGAGGACAAGGAAAACAGAAGTTTTGTCGCAAATACGCTCAATAGTCCAAACGTTAGAACTAAACTGTTGAAAAACTTTGCCATATCCACTCATCTTGCCTCCTGGCCAGCAGTGATTCAGTAAACATTCACTGGCCATCGTGCCAAAGCACAGGTGTATAATACTATTCCTTCCTCAATGCTCTCTACTGAGGGAAGGCTGCCTGCACCCAACCACAGGCCACCTGATGCCGTGTGATTGTACTTGTATGAAAAGAAGGAACTAGAAAAAAAGAAAGAGAGGATGAAACAAAGATTACTCTTCAGACTACACATTGATGAATCCGCATTAGGACGAGGTCCAGATGCTTAAAGCCGCTTGGTTGTCTTGGTCTGAGGGAGAGAAGGAAAACAAGAAAGGAAACAAATCACATTCTTTATAAACATCAGTGTTGAATGTGGCATGTGCTAATGTGCTATATATATCTGATGTTGATATGCCCTGTACATGTTCCTGGAACAGGTTGGCGCTTTTGCTCAGGAAACAGGA                                                  ]
[+] EMBL AU101820             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATCTTGCCTCCTGGCCAGCAGTGATTCAGTAAACATTCACTGGCCATCGTGCCAAAGCACAGGTGTATAATACTATTCCTTCCTCAATGCTCTCTACTGAGGGAAGGCTGCCTGCACCCAACCACAGGCCACCTGATGCCGTGTGATTGTACTTGTATGAAAAGAAGGAACTAGAAAAAAAGAAAGAGAGGATGAAACAAAGATTACTCTTCAGAATAaaaa                                                                                                                                                                                                                                                                         ]


>consensus_11728#0 GAGACGCATGCGACGCGGGCGGAGAGGAGACACGACCCACCCCCGCCACCGCCCGGAGGA GCCACGAGCGAGCAAGCCCTAGCCCCCGGGCGCGAGGGCGGCGGCCGCTGCTGCGTCGAC CGTCTCTCTCTCGTGCTCCGGCGCTGCTCGTCGTCTCCTTGGCCGAATCCAATCCGGGAG GTGCGGGGGCCGTTCCGATCGAGTCGGTCCTGCCATGTCGACCAAGAGGGTTCTTTGCAA GTTCTTCATGCATGGAGCTTGCTTGAAAGGAGAGTACTGTGAGTTCTCCCATGATTGGAA TGATCAACCAAACAATGTTTGCACGTTCTACCAGAAAGGTTCATGCTCGTATGGTAGCCG TTGCCGATATGACCATGTCAAAGTTTCTCGTAACCCCACAGTGGCTCCACCACCAAGCTC AAGTACTACAACACGTGCATCTAGTTCTCTTCAGCCTTTGAGTTTCGGGCGCCCTCACCA TGTGGGGTACCAAGCAGATTCAAGCAACCCAAGGCAACAGATATCTATGGATGTGCTGGC ACATTCTGGAAGTAAGCCTGTATGGAGAAATGATTTTCAACATGAAAGTGTACTTGAGGA TGGGATTGACTGGTCAATAAGTCCAACTGTGCAAAACCAGACAACCTTGAGTCCTGCTGA TCTGCCAATCTGTTCTTTTGCTGCTGGTGGTAATTGTCCTTATGGGGAAGAGTGCCCTCA GATGCATGGAGATCTGTGCACAACCTGTGGGAAAATGTGCTTACATCCTTATCGTCCTGA TGAGAGGGAGGAACATACCAAGCTATGTGAGAAAAACCACAAGCGTCTTGAGTCTTTGAA ACGTAGCCAAGAGATAGAATGCAGTGTCTGCCTGGACCGTGTGCTCTCAAAGCCTACTGC TGCTGAAAGGAAGTTTGGACTCTTATCTGAGTGTGATCATCCCTTCTGTATTTCATGTAT TAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTCAGCACTGAGGGC TTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCTTTGGTACTTTTC GAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAAGTCTATTGACTG CAAGTACTTCGATTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTGTTTCTACAAGCA TGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGACATCTTGATGCTGACGATGG AAGTACAGTGATTGCCAAAAATATTAGGTTGTCGGACTTCCTCAGTCGGTTACATCTTTA GGGACCAGTGACTGTATATATGTCAAATAATTATTGAAGTTCGCAGCAGGCCTCCTGGAG GAAGCAATCGTGATCTGAGGACAAGGAAAACAGAAGTTTTGTCGCAAATACGCTCAATAG TCCAAACGTTAGAACTAAACTGTTGAAAAACTTTGCCATATCCACTCATCTTGCCTCCTG GCCAGCAGTGATTCAGTAAACATTCACTGGCCATCGTGCCAAAGCACAGGTGTATAATAC TATTCCTTCCTCAATGCTCTCTACTGAGGGAAGGCTGCCTGCACCCAACCACAGGCCACC TGATGCCGTGTGATTGTACTTGTATGAAAAGAAGGAACTAGAAAAAAAGAAAGAGAGGAT GAAACAAAGATTACTCTTCAGACTACACATTGATGAATCCGCATTAGGACGAGGTCCAGA TGCTTAAAGCCGTTTGGTTGTCTTGGTCTGAGGGAGAGAAGGAAAACAAGAAAGGAAACA AATCACATTCTTTATAAACATCAGTGTTGAATGTGGCATGTGCTAATGTGCTATATATAT CTGATGTTGATATGCCCTGTACATGTTCCTGGAACAGGTTGGCGCTTTTGCTCAGGAAAC AGGAACGTCTGCCTATTTGTGGTGGCTTTTTTTTGTGTGAAAAAAAAAAAAAAA



consensusID : consensus_11728#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 507
fasta sequence
                              [GAGGACACTGACATGGACTGAGGAGTTTGGACTCTTATCTGAGTGTGATCATCCCTTCTGTATTTCATGTATTAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTCAGCACTGAGGGCTTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCTTTGGTACTTTTCGAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAAGTCTATTGACTGCAAGTACTTCGATTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTGTTTCTACAAGCATGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGACATCTTGATGCTGACGATGGAAGTACAGTGATTGCCAAAAATATTANGTTGTCGGACTTCCTCAGTCGGTTACATCTTTAGGGACCAGTGACTGTATATATGTCAAATAATTACTGAAGTTCGCAGCAGGCCTCCTGGAGGAAGCAATCGTGATC]

[+] EMBL CF318617             [GAGGACACTGACATGGACTGAGGAGTTTGGACTCTTATCTGAGTGTGATCATCCCTTCTGTATTTCATGTATTAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTCAGCACTGAGGGCTTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCTTTGGTACTTTTCGAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAAGTCTATTGACTGCAAGTACTTCGATTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTGTTTCTACAAGCATGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGACATCTTGATGCTGACGATGGAAGTACAGTGATTGCCAAAAATATTANGTTGTCGGACTTCCTCAGTCGGTTACATCTTTAGGGACCAGTGACTGTATATATGTCAAATAATTACTGAAGTTCGCAGCAGGCCTCCTGGAGGAAGCAATCGTGATC]


>consensus_11728#1 GAGGACACTGACATGGACTGAGGAGTTTGGACTCTTATCTGAGTGTGATCATCCCTTCTG TATTTCATGTATTAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTC AGCACTGAGGGCTTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCT TTGGTACTTTTCGAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAA GTCTATTGACTGCAAGTACTTCGATTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTG TTTCTACAAGCATGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGACATCTTGA TGCTGACGATGGAAGTACAGTGATTGCCAAAAATATTANGTTGTCGGACTTCCTCAGTCG GTTACATCTTTAGGGACCAGTGACTGTATATATGTCAAATAATTACTGAAGTTCGCAGCA GGCCTCCTGGAGGAAGCAATCGTGATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11728#0      GAGACGCATGCGACGCGGGCGGAGAGGAGACACGACCCACCCCCGCCACCGCCCGGAGGA 60
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      GCCACGAGCGAGCAAGCCCTAGCCCCCGGGCGCGAGGGCGGCGGCCGCTGCTGCGTCGAC 120
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      CGTCTCTCTCTCGTGCTCCGGCGCTGCTCGTCGTCTCCTTGGCCGAATCCAATCCGGGAG 180
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      GTGCGGGGGCCGTTCCGATCGAGTCGGTCCTGCCATGTCGACCAAGAGGGTTCTTTGCAA 240
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      GTTCTTCATGCATGGAGCTTGCTTGAAAGGAGAGTACTGTGAGTTCTCCCATGATTGGAA 300
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      TGATCAACCAAACAATGTTTGCACGTTCTACCAGAAAGGTTCATGCTCGTATGGTAGCCG 360
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      TTGCCGATATGACCATGTCAAAGTTTCTCGTAACCCCACAGTGGCTCCACCACCAAGCTC 420
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      AAGTACTACAACACGTGCATCTAGTTCTCTTCAGCCTTTGAGTTTCGGGCGCCCTCACCA 480
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      TGTGGGGTACCAAGCAGATTCAAGCAACCCAAGGCAACAGATATCTATGGATGTGCTGGC 540
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      ACATTCTGGAAGTAAGCCTGTATGGAGAAATGATTTTCAACATGAAAGTGTACTTGAGGA 600
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      TGGGATTGACTGGTCAATAAGTCCAACTGTGCAAAACCAGACAACCTTGAGTCCTGCTGA 660
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      TCTGCCAATCTGTTCTTTTGCTGCTGGTGGTAATTGTCCTTATGGGGAAGAGTGCCCTCA 720
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      GATGCATGGAGATCTGTGCACAACCTGTGGGAAAATGTGCTTACATCCTTATCGTCCTGA 780
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      TGAGAGGGAGGAACATACCAAGCTATGTGAGAAAAACCACAAGCGTCTTGAGTCTTTGAA 840
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      ACGTAGCCAAGAGATAGAATGCAGTGTCTGCCTGGACCGTGTGCTCTCAAAGCCTACTGC 900
consensus_11728#1      -------------------------------------------------GAGGACACTGA 11
                                                                         **   **** 

consensus_11728#0      TGCTGAAAG-GAAGTTTGGACTCTTATCTGAGTGTGATCATCCCTTCTGTATTTCATGTA 959
consensus_11728#1      CATGGACTGAGGAGTTTGGACTCTTATCTGAGTGTGATCATCCCTTCTGTATTTCATGTA 71
                           **  * * ************************************************

consensus_11728#0      TTAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTCAGCACTGAGGG 1019
consensus_11728#1      TTAGAAATTGGCGTAACAATTCTCCTACGTCTGGAATGGATGTGAACTCAGCACTGAGGG 131
                       ************************************************************

consensus_11728#0      CTTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCTTTGGTACTTTT 1079
consensus_11728#1      CTTGTCCAATATGTCGCAAACTTTCATACTATGTCATTCCAAGTGTTCTTTGGTACTTTT 191
                       ************************************************************

consensus_11728#0      CGAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAAGTCTATTGACT 1139
consensus_11728#1      CGAAGGAGGAAAAGCTGGAGATTATTGACAACTATAAAGCCAAACTCAAGTCTATTGACT 251
                       ************************************************************

consensus_11728#0      GCAAGTACTTCGATTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTGTTTCTACAAGC 1199
consensus_11728#1      GCAAGTACTTCGATTTTGGAACTGGTACTTGTCCCTTTGGGTCAAGCTGTTTCTACAAGC 311
                       ************************************************************

consensus_11728#0      ATGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGACATCTTGATGCTGACGATG 1259
consensus_11728#1      ATGCCTACAGAGACGGACGCTTGGAAGAGGTCATACTGCGACATCTTGATGCTGACGATG 371
                       ************************************************************

consensus_11728#0      GAAGTACAGTGATTGCCAAAAATATTAGGTTGTCGGACTTCCTCAGTCGGTTACATCTTT 1319
consensus_11728#1      GAAGTACAGTGATTGCCAAAAATATTANGTTGTCGGACTTCCTCAGTCGGTTACATCTTT 431
                       *************************** ********************************

consensus_11728#0      AGGGACCAGTGACTGTATATATGTCAAATAATTATTGAAGTTCGCAGCAGGCCTCCTGGA 1379
consensus_11728#1      AGGGACCAGTGACTGTATATATGTCAAATAATTACTGAAGTTCGCAGCAGGCCTCCTGGA 491
                       ********************************** *************************

consensus_11728#0      GGAAGCAATCGTGATCTGAGGACAAGGAAAACAGAAGTTTTGTCGCAAATACGCTCAATA 1439
consensus_11728#1      GGAAGCAATCGTGATC-------------------------------------------- 507
                       ****************                                            

consensus_11728#0      GTCCAAACGTTAGAACTAAACTGTTGAAAAACTTTGCCATATCCACTCATCTTGCCTCCT 1499
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      GGCCAGCAGTGATTCAGTAAACATTCACTGGCCATCGTGCCAAAGCACAGGTGTATAATA 1559
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      CTATTCCTTCCTCAATGCTCTCTACTGAGGGAAGGCTGCCTGCACCCAACCACAGGCCAC 1619
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      CTGATGCCGTGTGATTGTACTTGTATGAAAAGAAGGAACTAGAAAAAAAGAAAGAGAGGA 1679
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      TGAAACAAAGATTACTCTTCAGACTACACATTGATGAATCCGCATTAGGACGAGGTCCAG 1739
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      ATGCTTAAAGCCGTTTGGTTGTCTTGGTCTGAGGGAGAGAAGGAAAACAAGAAAGGAAAC 1799
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      AAATCACATTCTTTATAAACATCAGTGTTGAATGTGGCATGTGCTAATGTGCTATATATA 1859
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      TCTGATGTTGATATGCCCTGTACATGTTCCTGGAACAGGTTGGCGCTTTTGCTCAGGAAA 1919
consensus_11728#1      ------------------------------------------------------------
                                                                                   

consensus_11728#0      CAGGAACGTCTGCCTATTTGTGGTGGCTTTTTTTTGTGTGAAAAAAAAAAAAAAA 1974
consensus_11728#1      -------------------------------------------------------
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)