These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11729#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1915 fasta sequence [AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTTCCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTGGCCGCAGCAGCGCCTGCGCAGCGAGGGGGGTCTCCTGTGCGTGTTGCGCGGCTGTGTCTTCAGCACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTCTCGCCCTCCTGCACGGAGGAGGTATGTCCCATCAATCAGACACATCTTCAAGCTCAAATGATTCCGAAGATAGCAACATCATCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTGAGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCAAGATTGAAGCTCAGAAAGCTAGTACATCTCACCCTCGAAGTGGTGAACGGAAATATGTAAAGAGGAACCGCGAAGAGGGCCATCGACGACTCGTGGAAGATTACTTCTCTAAAGATCCAATCTACAGTGATAAACAGTTCCGTGCAAGGTACCGGATGAGAAGACCCCTTTTTCTACGTATTGTTCATGCCTTAGGTGAGTGGTCTCCCTATTTCACTAGTAGGAGAGATGCCATTAATCGTCAAGGGCTCTCACCTTTGCAAAAATGCACAATAGCCATTCGTGCATTAGCATGTGGCACCCTCGGAGACGCCATTGATGAATACGTAGATACTGGTATCAGCACAGCACTGGAGTGTTTGGATTGGTTTGTGGAAGGGGTGATTGACAATTTTGGTGAAGAATATTTGCGAAGCCCCACTAGTGAGGATATGCAACATATACTACAAATGAATGAGGCACGGGGCTTCCCTGGCATGTTAGGAAGTATTGGCTGTATGCACTGGGAGTGGAAAAATTGCCCAGTTATATGGAGGCGTCACCTTACTCATACCGATCATGGTGCGACTACAATGATTCTTGAAGCGGTTGCTTCAAATGACAGCTGGATATGGCATGCTTTCTTTGGTGCCATTGGATCGAACAATGAGATCACCATTCTCGGCCAACCACAGTTGTTCACCGAATTGTTGAAAGGCCAAGCTGCTCATGTGCAATTTTCTGTCAACAGGAGGCAATACAATACAGGCTACTATCTTGCTGATGGAATATACCCAGAAGGCAATGTCTTTGTTAAAACAGTAACCCTCCCTCAGAGCGAATAGGATCAATTGTTTGCACGGCATCAAGAAGGAGCAAGGAAGGACGTCCAGGAAGCCTTTGGACTTCTACAATCTCGTTTTGCCATTGTGCGTGGTCCCACTCGTTTCTTTCAACAAGAGACTCTTGTCAAAATTATGCAAGCTTGCATTATACTTCACAACATGACAGTTGAGGATGAGAAAGATATGGGAAGCTCTTGTTTTGACTCGGATGAAATCTTAGGGACACTGGCTGTTCTTTTATCAGATATCAACACTGTGCCTGCTGGCTGTTATGCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCAACACATGCACAACTTAGAAGGGACTTAATGGGGCATATTTGGCAGCGTTTTGGTCCATTTGGCAACAAGTAAAACAATCAATCCTCCTGTATGGTTATGTTAAAAGCCTAAGCACCTTTGAGGTTACTGTAAGCCAACATTTTGGAAAGCCAGAATCTCAAACAGTGTCCCGCTGGATTACTTGGGATATTGGACTTCCAACATAACCAATGATGTGGTTCTATTGTTCCCTTTGTCCGACTCGCTACTATTCCAACTTGCTGGTACAAGAGCTAGCTCTGTGCTGCTATGTTCTGTTCCAACTGTGGATGTATTGGGTATTATATAACAAAGAGCATTA-GGAGTATATTACTTTTGAGTTT] [+] EMBL AK103436 [AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTTCCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTGGCCGCAGCAGCGCCTGCGCAGCGAGGGGGGTCTCCTGTGCGTGTTGCGCGGCTGTGTCTTCAGCACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTCTCGCCCTCCTGCACGGAGGAGGTATGTCCCATCAATCAGACACATCTTCAAGCTCAAATGATTCCGAAGATAGCAACATCATCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTGAGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCAAGATTGAAGCTCAGAAAGCTAGTACATCTCACCCTCGAAGTGGTGAACGGAAATATGTAAAGAGGAACCGCGAAGAGGGCCATCGACGACTCGTGGAAGATTACTTCTCTAAAGATCCAATCTACAGTGATAAACAGTTCCGTGCAAGGTACCGGATGAGAAGACCCCTTTTTCTACGTATTGTTCATGCCTTAGGTGAGTGGTCTCCCTATTTCACTAGTAGGAGAGATGCCATTAATCGTCAAGGGCTCTCACCTTTGCAAAAATGCACAATAGCCATTCGTGCATTAGCATGTGGCACCCTCGGAGACGCCATTGATGAATACGTAGATACTGGTATCAGCACAGCACTGGAGTGTTTGGATTGGTTTGTGGAAGGGGTGATTGACAATTTTGGTGAAGAATATTTGCGAAGCCCCACTAGTGAGGATATGCAACATATACTACAAATGAATGAGGCACGGGGCTTCCCTGGCATGTTAGGAAGTATTGGCTGTATGCACTGGGAGTGGAAAAATTGCCCAGTTATATGGAGGCGTCACCTTACTCATACCGATCATGGTGCGACTACAATGATTCTTGAAGCGGTTGCTTCAAATGACAGCTGGATATGGCATGCTTTCTTTGGTGCCATTGGATCGAACAATGAGATCACCATTCTCGGCCAACCACAGTTGTTCACCGAATTGTTGAAAGGCCAAGCTGCTCATGTGCAATTTTCTGTCAACAGGAGGCAATACAATACAGGCTACTATCTTGCTGATGGAATATACCCAGAAGGCAATGTCTTTGTTAAAACAGTAACCCTCCCTCAGAGCGAATAGGATCAATTGTTTGCACGGCATCAAGAAGGAGCAAGGAAGGACGTCCAGGAAGCCTTTGGACTTCTACAATCTCGTTTTGCCATTGTGCGTGGTCCCACTCGTTTCTTTCAACAAGAGACTCTTGTCAAAATTATGCAAGCTTGCATTATACTTCACAACATGACAGTTGAGGATGAGAAAGATATGGGAAGCTCTTGTTTTGACTCGGATGAAATCTTAGGGACACTGGCTGTTCTTTTATCAGATATCAACACTGTGCCTGCTGGCTGTTATGCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCAACACATGCACAACTTAGAAGGGACTTAATGGGGCATATTTGGCAGCGTTTTGGTCCATTTGGCAACAAGTAAAACAATCAATCCTCCTGTATGGTTATGTTAAAAGCCTAAGCACCTTTGAGGTTACTGTAAGCCAACATTTTGGAAAGCCAGAATCTCAAACAGTGTCCCGCTGGATTACTTGGGATATTGGACTTCCAACATAACCAATGATGTGGTTCTATTGTTCCCTTTGTCCGACTCGCTACTATTCCAACTTGCTGGTACAAGAGCTAGCTCTGTGCTGCTATGTTCTGTTCCAACTGTGGATGTATTGGGTATTATATAACAAAGAGCATTA GGAGTATATTACTTTTGAGTTT] [+] EMBL CB638118 [AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTTCCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTGGCCGCAGCAGCGCCTGCGCAGCGAGGGGGGTCTCCTGTGCGTGTTGCGCGGCTGTGTCTTCAGCACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTCTCGCCCTCCTGCACGGAGGAGGTATGTCCCATCAATCAGACACATCTTCAAGCTCAAATGATTCCGAAGATAGCAACATCATCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTGAGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCA ] [+] EMBL CB638170 [AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTTCCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTGGCCGCAACAGCGCCTGCGCAGCGAGGGGGGTCTACTGTGCGTGTTGCGCGGCTGTGTCTTCAACACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTATCac ] [+] EMBL CF322772 [ TCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTGAGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCAAGATTGAAGCTCAGAAAGCTAGTACATCTCACCCTCGAAGTGGTGAACGGAAATATGTAAAGAGGAACCGCGAAGAGGGCCATCGACGACTCGTGGAAGATTACTTCTCTAAAGATCCAATCTACAGTGATAAACAGTTCCGTGCAAGGTACCGGATGAGAAGACCCCTTTTTCTACGTATTGTTCATGCCTTAGGTGAGTGGTCTCCCTATTTCACTAGTAGGAGAGATGCCATTAATCGTCAAGGGCTCTCACCTTTGCAAAAATGCACAATAGCCATTCGTGCATTAGCATGTGGCACCCTCGGAGACGCCATTGATGAATACGTAGATACTGGTATCAGCACAG ] [-] EMBL CB638171 [ CATTGTGCGTGGTCCCACTCGTTTCTTTCAACAAGAGACTCTTGTCAAAATTATGCAAGCTTGCATTATACTTCACAACATGACAGTTGAGGATGAGAAAGATATGGGAAGCTCTTGTTTTGACTCGGATGAAATCTTAGGGACACTGGCTGTTCTTTTATCAGATATCAACACTGTGCCTGCTGGCTGTTATGCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCAACACATGCACAACTTAGAAGGGACTTAATGGAGCATATTTGGCAGCGTTTTGGTCCATTTGGCAACAAGTAAAACAATCAATCCTCCTGTATGGTTATGTTAAAAGCCTAAGCACCTTTGAGGTTACTGTAAGCCAACATTTTGGAAAGCCAGAATCTCAAACAGTGTCCCGCTGGATTACTTGGGATATTGGACTTCCAACATAACCAATGATGTGGTTCTATTGTTCCCTTTGTCCGACTCGCTACTATTCCAACTTGCTGGTACAAGAGCTAGCTCTGTGCTGCTATGTTCTGTTCCAACTGTGGATGTATTGGGTATTATATAACAAAGAGCATTAGGGAGTATATTACTTTTGA ] consensusID : consensus_11729#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence [ACTCTGCCAGGAAGCCTTTGGGTTTTTCCAATTTCGTTTTGCCCTTGGGCGGGGTCCCCCTCGTTTTTTTTAACAAAAGATTTTTTCAAAATTATGCCAGCTTGCCTTATTCTTCTCACCCTGCCAGTTGGGGTTGAGAAAGATATGGGAAGCTCTTGTTTTGGCTCGGATGAAATCTTAGGGCCCCTGGCTGTTCTTTTTTCAGATATCAACCCTGTGCCTTATGACTGTTATCCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCCACCCATGCCCAACTTAGAAGGGGCTTAATGGAGCATTTTTGGCAGCGTTTTGGTCCCTTTGGCACCAAGTAAACCAATCCATCCTCCCGTATGGTTATGTTAAAAGCCTAAGCCCCTTTGGGGTTTCTGTAAGCCCCCCTTTTGGAAAGCCAGAATTTCCAACAGTGTCCCCCTGGATTACTTGGGATTTTGGGCTTCCCACATAACCAATGATGGGGTTTTATTGTTCCCTTTGTCCGCCTCGCTACTTTTCCAACTTGTTGGTCCCAAAGCTAGCTTTGTGGTGCTATGTTTTGTTCCCCCTGTGGATGTTTTGGGTTTTTTATACCAAAGAGCCTTAGGGGTATTTTCCTTTTGAGTTTGTGATCCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA759261 [ACTCTGCCAGGAAGCCTTTGGGTTTTTCCAATTTCGTTTTGCCCTTGGGCGGGGTCCCCCTCGTTTTTTTTAACAAAAGATTTTTTCAAAATTATGCCAGCTTGCCTTATTCTTCTCACCCTGCCAGTTGGGGTTGAGAAAGATATGGGAAGCTCTTGTTTTGGCTCGGATGAAATCTTAGGGCCCCTGGCTGTTCTTTTTTCAGATATCAACCCTGTGCCTTATGACTGTTATCCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCCACCCATGCCCAACTTAGAAGGGGCTTAATGGAGCATTTTTGGCAGCGTTTTGGTCCCTTTGGCACCAAGTAAACCAATCCATCCTCCCGTATGGTTATGTTAAAAGCCTAAGCCCCTTTGGGGTTTCTGTAAGCCCCCCTTTTGGAAAGCCAGAATTTCCAACAGTGTCCCCCTGGATTACTTGGGATTTTGGGCTTCCCACATAACCAATGATGGGGTTTTATTGTTCCCTTTGTCCGCCTCGCTACTTTTCCAACTTGTTGGTCCCAAAGCTAGCTTTGTGGTGCTATGTTTTGTTCCCCCTGTGGATGTTTTGGGTTTTTTATACCAAAGAGCCTTAGGGGTATTTTCCTTTTGAGTTTGTGATCCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_11729#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence [GACACTGACATGGACTGAGGAGTAGAAATTATACTTCACAACATGACAATTGAGGATGAGAAAGATATGGCCAGCGCTTGTTTTGACCCAGATGAAATTTCAGGGACATTGGCTGTTATTTTATCAGACATCAACACTGTGCCTGCTGATTCTTTTACTGAAGTGCTACATAGAAATGCTTCTGTTTGTGCTCCACCGAAACATACACGACTTAGAAGGGACTTAATGGAGCATATTTGGCAGCGATTTGGTCCATTTGGCAACCAGTAAAACAATTAATCCTAGTGTGGAAAAGTCAGTGAAGGTCAAGGCTATCTGGCTTTAACTACCACCAAACAGCTGTCAGCATAAATTGCTACATTTTCAGAAAGACATTTTAAAGTTGCTCCCAACAAATCCTAGGTTTTCAACAGAAGTCCTCAATCTAGACTGGAAGTTGCTAATTTGTTAAAGTTAGCTCTTCGATACAGCTCCCTGCAGTGAGTTGATCATGGTCATCTTTTTTCTATATATTACCAGGGAGTGCTTAGGCAGGCTTTTCGTATGCACCTTTTGAAGTACTGTAGGCCAACAAGTTGGAATTTTTCAGCAGAATTTTATTGTGCATAACAGCAATCTCAAGCAGGAGTTCCATTGGATTA] [+] EMBL CF318997 [GACACTGACATGGACTGAGGAGTAGAAATTATACTTCACAACATGACAATTGAGGATGAGAAAGATATGGCCAGCGCTTGTTTTGACCCAGATGAAATTTCAGGGACATTGGCTGTTATTTTATCAGACATCAACACTGTGCCTGCTGATTCTTTTACTGAAGTGCTACATAGAAATGCTTCTGTTTGTGCTCCACCGAAACATACACGACTTAGAAGGGACTTAATGGAGCATATTTGGCAGCGATTTGGTCCATTTGGCAACCAGTAAAACAATTAATCCTAGTGTGGAAAAGTCAGTGAAGGTCAAGGCTATCTGGCTTTAACTACCACCAAACAGCTGTCAGCATAAATTGCTACATTTTCAGAAAGACATTTTAAAGTTGCTCCCAACAAATCCTAGGTTTTCAACAGAAGTCCTCAATCTAGACTGGAAGTTGCTAATTTGTTAAAGTTAGCTCTTCGATACAGCTCCCTGCAGTGAGTTGATCATGGTCATCTTTTTTCTATATATTACCAGGGAGTGCTTAGGCAGGCTTTTCGTATGCACCTTTTGAAGTACTGTAGGCCAACAAGTTGGAATTTTTCAGCAGAATTTTATTGTGCATAACAGCAATCTCAAGCAGGAGTTCCATTGGATTA] consensusID : consensus_11729#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 507 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACTGAAACTCTGCAAGGGGCATCATAATTCATAGTACCGAGTAATATGCTCCTGAAGTCCAAATGCTATTTTTACAAAATAACCAACGTATCCATAGTTGGGATTTTAAACAAAAGAAACAGTTGAAACCCATCACTTGTTATTATGTTGGAAATTTACTACCCCAGTCCCCAGGTAATCCAATGGAACTCCTGCTTGAGATTGCTGTTATGCACAATAAAATTCTGCTGAAAAATTCCAACTTGTTGGCCTACAGTACTTCAAAAGGTGCATACGAAAAGCCTGCCTAAGCACTCCCTGGTAATATATAGAAAAAAGATGACCATGATCAACTCACTGCAGGGAGCTGTATCGAAGAGCTAACTTTAACAAATTAGCAACTTCCAGTCTAGATTGAGGACACACTAGGATTAATTGTTTTACTGGTTGCCAAATGGACCAAATCGCTGCCAAATATGCTCCATTAAGTCCCTTCTA] [+] EMBL CF318998 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACTGAAACTCTGCAAGGGGCATCATAATTCATAGTACCGAGTAATATGCTCCTGAAGTCCAAATGCTATTTTTACAAAATAACCAACGTATCCATAGTTGGGATTTTAAACAAAAGAAACAGTTGAAACCCATCACTTGTTATTATGTTGGAAATTTACTACCCCAGTCCCCAGGTAATCCAATGGAACT ] [+] EMBL CA997983 [ ccgagTTTTTTTTTTTTTTTTTTGACTGAAACTCTGCAAGTGTCATCATAATTCATAGTACCGAGTAATATGCTCCTGAAGTCCAAATGCTATTTTTACAAAATAACCAACGTATCCATAGTTGGTATCTTAGACAAAAGAAACAGTAGAAGCACATCACTAGTTATTATGTTGGAAATCTACTACCCCAGTCCCCAGGTAATCCAATGGAACTCCTGCTTGAGATTGCTGTTATGCACAATAAAATTCTGCTGAAAAATTCCAACTTGTTGGCCTACAGTACTTCAAAAGGTGCATACGAAAAGCCTGCCTAAGCACTCCCTGGTAATATATAGAAAAAAGATGACCATGATCAACTCACTGCAGGGAGCTGTATCGAAGAGCTAACTTTAACAAATTAGCAACTTCCAGTCTAGATTGAGGACACACTAGGATTAATTGTTTTACTGGTTGCCAAATGGACCAAATCGCTGCCAAATATGCTCCATTAAGTCCCTTCTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11729#0 AACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAGCCGGTTT 60 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 CCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGGGGTGGTG 120 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 GCCGCAGCAGCGCCTGCGCAGCGAGGGGGGTCTCCTGTGCGTGTTGCGCGGCTGTGTCTT 180 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 CAGCACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGCTCTCTCG 240 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 CCCTCCTGCACGGAGGAGGTATGTCCCATCAATCAGACACATCTTCAAGCTCAAATGATT 300 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 CCGAAGATAGCAACATCATCCACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTG 360 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 AGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCCAAGATTG 420 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 AAGCTCAGAAAGCTAGTACATCTCACCCTCGAAGTGGTGAACGGAAATATGTAAAGAGGA 480 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 ACCGCGAAGAGGGCCATCGACGACTCGTGGAAGATTACTTCTCTAAAGATCCAATCTACA 540 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 GTGATAAACAGTTCCGTGCAAGGTACCGGATGAGAAGACCCCTTTTTCTACGTATTGTTC 600 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 ATGCCTTAGGTGAGTGGTCTCCCTATTTCACTAGTAGGAGAGATGCCATTAATCGTCAAG 660 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 GGCTCTCACCTTTGCAAAAATGCACAATAGCCATTCGTGCATTAGCATGTGGCACCCTCG 720 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 GAGACGCCATTGATGAATACGTAGATACTGGTATCAGCACAGCACTGGAGTGTTTGGATT 780 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 GGTTTGTGGAAGGGGTGATTGACAATTTTGGTGAAGAATATTTGCGAAGCCCCACTAGTG 840 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 AGGATATGCAACATATACTACAAATGAATGAGGCACGGGGCTTCCCTGGCATGTTAGGAA 900 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 GTATTGGCTGTATGCACTGGGAGTGGAAAAATTGCCCAGTTATATGGAGGCGTCACCTTA 960 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 CTCATACCGATCATGGTGCGACTACAATGATTCTTGAAGCGGTTGCTTCAAATGACAGCT 1020 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 GGATATGGCATGCTTTCTTTGGTGCCATTGGATCGAACAATGAGATCACCATTCTCGGCC 1080 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 AACCACAGTTGTTCACCGAATTGTTGAAAGGCCAAGCTGCTCATGTGCAATTTTCTGTCA 1140 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 ACAGGAGGCAATACAATACAGGCTACTATCTTGCTGATGGAATATACCCAGAAGGCAATG 1200 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 TCTTTGTTAAAACAGTAACCCTCCCTCAGAGCGAATAGGATCAATTGTTTGCACGGCATC 1260 consensus_11729#1 ------------------------------------------------------------ consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 AAGAAGGAGCAAGGAAGGACGTCCAGGAAGCCTTTGGACTTCTACAATCTCGTTTTGCCA 1320 consensus_11729#1 ----------------ACTCTGCCAGGAAGCCTTTGGGTTTTTCCAATTTCGTTTTGCCC 44 consensus_11729#2 ------------------------------------------------------------ consensus_11729#3 ----------------------------------------TTTTTTTTTTTTTTTTTTTT 20 consensus_11729#0 TTGTGCGTGGTCCCACTCGTTTCTTTCAACAAGAGACTCTTGTCAAAATTATGCAAGCTT 1380 consensus_11729#1 TTGGGCGGGGTCCCCCTCGTTTTTTTTAACAAAAGATTTTT-TCAAAATTATGCCAGCTT 103 consensus_11729#2 ----------------------------------GACACTGACATGGACTGAG-GAGTAG 25 consensus_11729#3 TTTTTTTTGGACTGAAACTCTGCAAGGGGCATCATAATTCA--TAGTACCGAGTAATATG 78 * * * * consensus_11729#0 GCATTATACTTCACAACATGACAGTTGAGGATGAGAAAGATATGGGAAGCTCTTGTTTTG 1440 consensus_11729#1 GCCTTATTCTTCTCACCCTGCCAGTTGGGGTTGAGAAAGATATGGGAAGCTCTTGTTTTG 163 consensus_11729#2 AAATTATACTTCACAACATGACAATTGAGGATGAGAAAGATATGGCCAGCGCTTGTTTTG 85 consensus_11729#3 CTCCTGAAGTCCAAATGCTATTTTTACAAAATAACCAACGTATCCATAGTTGGGATTTTA 138 * * * * * * * * ** *** ** **** consensus_11729#0 ACTCGGATGAA-ATCTTAGGGACACTGGCTGTTCTTTTATCAGATATCAAC--ACTGTGC 1497 consensus_11729#1 GCTCGGATGAA-ATCTTAGGGCCCCTGGCTGTTCTTTTTTCAGATATCAAC--CCTGTGC 220 consensus_11729#2 ACCCAGATGAA-ATTTCAGGGACATTGGCTGTTATTTTATCAGACATCAAC--ACTGTGC 142 consensus_11729#3 AACAAAAGAAACAGTTGAAACCCATCACTTGTTATTATGTTGGAAATTTACTACCCCAGT 198 * ** * * * * **** ** * * ** ** ** * * consensus_11729#0 CTGCTGGCTGTTATGCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCAACAC 1557 consensus_11729#1 CTTATGACTGTTATCCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCCACCC 280 consensus_11729#2 CTGCTGATTCTTTTACTGAAGTGCTACATAGAAATGCTTCTGTTTGTGCTCCACCGAAAC 202 consensus_11729#3 CCCCAGGTAATCCAATGGAACTCCTGCTTGAGATTGCTG----TTATGCACAATAAAATT 254 * * * *** * * * * **** ** *** * * * consensus_11729#0 ATGCACAACTTAGAAGGGACTTAATGGGGCATATTTGGCAGCGTTTTGGTCCATTTGGCA 1617 consensus_11729#1 ATGCCCAACTTAGAAGGGGCTTAATGGAGCATTTTTGGCAGCGTTTTGGTCCCTTTGGCA 340 consensus_11729#2 ATACACGACTTAGAAGGGACTTAATGGAGCATATTTGGCAGCGATTTGGTCCATTTGGCA 262 consensus_11729#3 CTGCTGAA--AAATTCCAACTTGTTGGCCTACAGTACTTCAAAA---GGTGCAT---ACG 306 * * * * *** *** * * *** * * * consensus_11729#0 ACAAGTAAAACAATCAATCCTCCTGTATGGTTATGTTAAAAGCCTAAGCACCTTTGAGGT 1677 consensus_11729#1 CCAAGTAAACCAATCCATCCTCCCGTATGGTTATGTTAAAAGCCTAAGCCCCTTTGGGGT 400 consensus_11729#2 ACCAGTAAAACAATTAATCCTAGTGTGGAAAAGTCAGTGAAGGTCAAGGCTATCTGGCTT 322 consensus_11729#3 AAAAGCCTGCCTAAGCACTCCCTGGTA-ATATATAGAAAAAAGATGACCATGATCAACTC 365 ** * * * * ** * ** * consensus_11729#0 TA--------CTGTAAGCCAACATTTTGGAAAGCCAGAATCTCAAACAG---TGTCCCGC 1726 consensus_11729#1 TT--------CTGTAAGCCCCCCTTTTGGAAAGCCAGAATTTCCAACAG---TGTCCCCC 449 consensus_11729#2 TAACTACCACCAAACAGCTGTCAGCATAAATTGCTACATTTTCAGAAAGACATTTTAAAG 382 consensus_11729#3 A---------CTGCAGGGAGCTGTATCGAAGAGCTA--ACTTTAACAAA----------- 403 * * * ** * * * consensus_11729#0 TGGATTACTTGGGATATTGGACTTCCAACATAA-CCAATGATGTGGTTCTATTGTTCCC- 1784 consensus_11729#1 TGGATTACTTGGGATTTTGGGCTTCCCACATAA-CCAATGATGGGGTTTTATTGTTCCC- 507 consensus_11729#2 TTGCTCCCAACAAATCCTAGGTTTTCAACAGAAGTCCTCAATCTAGACTGGAAGTTGCTA 442 consensus_11729#3 TTAGCAACTTCCAGT-CTAGATTGAGGACACACTAGGATTAATTGTTTTACTGGTTGCCA 462 * * * * * * *** * * *** * consensus_11729#0 -TTTGTCCGACTCGCTACTAT--TCCAACTTGCTGGTACAAGAGCTAGCTCTGTGCTGCT 1841 consensus_11729#1 -TTTGTCCGCCTCGCTACTTT--TCCAACTTGTTGGTCCCAAAGCTAGCTTTGTGGTGCT 564 consensus_11729#2 ATTTGTTAAAGTTAGCTCTTCGATACAGCTCCCTG--CAGTGAGTTGATCATGGTCATCT 500 consensus_11729#3 AATGGACCAAATCGCTGCCA------AATATGCTC--CATTAAGTCCCTTCTA------- 507 * * * * * * ** * consensus_11729#0 ATGTTCTGTTC--CAACTGTGGATGTATTGGGTATTATATAACAAAGAGCATTAGGAGTA 1899 consensus_11729#1 ATGTTTTGTTC--CCCCTGTGGATGTTTTGGGTTTTTTATACCAAAGAGCCTTAGGGGTA 622 consensus_11729#2 TTTTTCTATATATTACCAGGGAGTGCTTAGGCAGGCTTTTCGTATGCACCTTTTGAAGTA 560 consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 TATTACTTTTG-AGTTT------------------------------------------- 1915 consensus_11729#1 TTTTCCTTTTG-AGTTTGTGATCCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 681 consensus_11729#2 CTGTAGGCCAACAAGTTGGAATTTTTCAGCAGAATTTTATTGTGCATAACAGCAATCTCA 620 consensus_11729#3 ------------------------------------------------------------ consensus_11729#0 --------------------- consensus_11729#1 AAAA----------------- 685 consensus_11729#2 AGCAGGAGTTCCATTGGATTA 641 consensus_11729#3 --------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||