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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11744#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2343 fasta sequence
[TGGGTTGGGTTGGGTTGGGTCCGTCCGATGAATGTGAAGAAATCCAAGACTGACGAGACGACAGGGCCGGTGCGGTGCGACGGCGGTCGGCTTCGGCTTCTTCGTTTCCATCGCCGGCGGCGGCGCCTCCTTCCCTTCCCTTCCCTTCTATGCGCGGCCTCCTCCGCCGTGTCTACCTCCGCCTCCCCCCTTTCCCTCCTGCCACCTCTCTTTATTATTGGTCAAGAACAAGACCTGCAGCTGCAGGGCCCAACCACCCCATCCCTAGGCGCATGTCGACGTCCTCTACTGCCGCGGCGGTCGTTGCCGAGGGCTCCGCCGCTCGCCGCTTCTGGATCGCCGCCGCCTCGAGGGAGGCCGCCTTCGCCGCCTACACGCCCTTCCTCGTCTCCCTCGCCGCCGGGGCCCTCCGCCTGGATTCCTTCCGCCAATACATCGCCCAGGATGCCTACTTCCTCCACGCCTTCGCCCGCGCCTATGAGATGGCCGAGGAGTGCGCCGATGACGACGACGACAAGGCCACCATCGTCGTCCTCAGGAAGGCCATCCTCCGCGAGCTCAACCTCCACGCTTCCGTCCTTCAGGAATGGGGAGTCGATCCCAACAAAGAAATCCCTCCAATCCCAGCCACAACTAAGTACACTGATTTCTTACTTGCAACTTCCACTGGAAAGGTTGATGGTGGGAAAGGTTCTGATAAAATGGTCACACCATTCGAGAAGACGAAAATTGCTGCATACACTGTTGGGGCTATGACCCCATGCATGAGGCTTTATGCGTATCTGGGCAAAGAACTTGCAGTTTTCTTGAAACAGGATGAAAATCACCCATACAAGAAATGGATTGAGACTTATGCATCCAGTGATTTTGAGAATAACGCACTCCAAATAGAAGAGTTGCTTGATAAACTAAGTGTCTCTCTAACTGGCGAGGAGCTTGAGATTATTGGGAAGCTCTACCAGCAAGCTATGAGGCTGGAAGTTGAGTTCTTCTCTGCTCAGCCAGTAGACCAACCTGTTGTAGCTCCACTCTCAAGATATTGTGGTCCGAAAGATAAGCTCTTGATATTTTGTGATTTTGATTTGACATGCACTGTTGTTGATTCATCTGCCATTTTGGCGGAGATTGCAATCTTGTCACACCAAAAGGCTAGTCAAGGTGGGGCTGATAGTTCCCTTGATCGTACAAAATCAGCGGACTTGAGAAATTCATGGAACATGCTCTCAAATCAATACATGGAAGAGTATGAGCAATGCATAGCAAGCTTGCTTCCTCCAGAAGAAGCAAGGTCACTAGACTATGATCAACTGTATAAAGGTTTGGAGGTGCTATCGCAGTTTGAGAAACTTGCAAACTCTAGGGTGGTTGATTCTGGTGTCCTGAGGGGAATGAATTTAGATGACATCCGAAAAGCTGGAGAGAGGCTTATTCTGCAAGATGGATGCAAAATTTTTTTTCAAAAGATTGGCAAAACAAGGGAGAACCTCAATTTAGATGTCCATATTCTTTCCTATTGCTGGTGCGCAGATCTTATAAGGTCAGCTTTTTCATCAGTTGGTTGTCTAGACGGGCTGAACATACATTCAAATGAGTTTGCTTTTGAGGGATCTGTTTCAACTGGTCATATTAACAGAC-AAATGGAGTCTCCTCTGGACAAAGCTGAAAAGTTCAAGAGCATCAAAAGCGACGT-GGGTAGTACAGGGACATTA-TTGTCAGTCTATATTGGGGACTC-GGTTGGAGATTTGCTTTGCTTGTTGGAGGCAGATATTGGTATTGTTGTTGGATCAAGCACAACCTTGCGGAGAGTGGGCAAACAGTTTGGTGTTTCATTTGTTCCTCTGTTCACTGGGTTGGTAGAGAAGCAGAGGCGAATAGAAAAGGAAGAATCATCCATCTTCAAGGCACGGTCTGGAATTCTTTATACGGTTTCTAGCTGGTCGGAGGTACAGGCTTTCATCCTGGGAAATGATTTCAGCTGATTGCTGGTGGCCTTGTGAATCGTTTTCCTTGGCAAACAAGTGTACAAGACTGGTGCCAATTGATGGACTTGATACGAGTAAAACTCGATGTGGCCATTTTATTAAAGCCGCATGCGTGCCGACTCTCTTCCTGTACGAATGAATTGAATACCTTGTGTTGTGCGATGGTTTTGTATGATCAATGTGTCATTGATTACACAATCGATGGACCCCTTTTCATTCGGGGGTCATTTC--ATATATATATTTTTACTTTAATTTCCGGAGTGTTTCCTGGCATTGCAACATAGTGATGCACCCGAGTGTAACTGTAGAGATGGTGTTTGTAGCAATAAAAAGTTGATTGCTGGAGTGGTCATCCAAAAAA]
[+] EMBL AK067576 [TGGGTTGGGTTGGGTTGGGTCCGTCCGATGAATGTGAAGAAATCCAAGACTGACGAGACGACAGGGCCGGTGCGGTGCGACGGCGGTCGGCTTCGGCTTCTTCGTTTCCATCGCCGGCGGCGGCGCCTCCTTCCCTTCCCTTCCCTTCTATGCGCGGCCTCCTCCGCCGTGTCTACCTCCGCCTCCCCCCTTTCCCTCCTGCCACCTCTCTTTATTATTGGTCAAGAACAAGACCTGCAGCTGCAGGGCCCAACCACCCCATCCCTAGGCGCATGTCGACGTCCTCTACTGCCGCGGCGGTCGTTGCCGAGGGCTCCGCCGCTCGCCGCTTCTGGATCGCCGCCGCCTCGAGGGAGGCCGCCTTCGCCGCCTACACGCCCTTCCTCGTCTCCCTCGCCGCCGGGGCCCTCCGCCTGGATTCCTTCCGCCAATACATCGCCCAGGATGCCTACTTCCTCCACGCCTTCGCCCGCGCCTATGAGATGGCCGAGGAGTGCGCCGATGACGACGACGACAAGGCCACCATCGTCGTCCTCAGGAAGGCCATCCTCCGCGAGCTCAACCTCCACGCTTCCGTCCTTCAGGAATGGGGAGTCGATCCCAACAAAGAAATCCCTCCAATCCCAGCCACAACTAAGTACACTGATTTCTTACTTGCAACTTCCACTGGAAAGGTTGATGGTGGGAAAGGTTCTGATAAAATGGTCACACCATTCGAGAAGACGAAAATTGCTGCATACACTGTTGGGGCTATGACCCCATGCATGAGGCTTTATGCGTATCTGGGCAAAGAACTTGCAGTTTTCTTGAAACAGGATGAAAATCACCCATACAAGAAATGGATTGAGACTTATGCATCCAGTGATTTTGAGAATAACGCACTCCAAATAGAAGAGTTGCTTGATAAACTAAGTGTCTCTCTAACTGGCGAGGAGCTTGAGATTATTGGGAAGCTCTACCAGCAAGCTATGAGGCTGGAAGTTGAGTTCTTCTCTGCTCAGCCAGTAGACCAACCTGTTGTAGCTCCACTCTCAAGATATTGTGGTCCGAAAGATAAGCTCTTGATATTTTGTGATTTTGATTTGACATGCACTGTTGTTGATTCATCTGCCATTTTGGCGGAGATTGCAATCTTGTCACACCAAAAGGCTAGTCAAGGTGGGGCTGATAGTTCCCTTGATCGTACAAAATCAGCGGACTTGAGAAATTCATGGAACATGCTCTCAAATCAATACATGGAAGAGTATGAGCAATGCATAGCAAGCTTGCTTCCTCCAGAAGAAGCAAGGTCACTAGACTATGATCAACTGTATAAAGGTTTGGAGGTGCTATCGCAGTTTGAGAAACTTGCAAACTCTAGGGTGGTTGATTCTGGTGTCCTGAGGGGAATGAATTTAGATGACATCCGAAAAGCTGGAGAGAGGCTTATTCTGCAAGATGGATGCAAAATTTTTTTTCAAAAGATTGGCAAAACAAGGGAGAACCTCAATTTAGATGTCCATATTCTTTCCTATTGCTGGTGCGCAGATCTTATAAGGTCAGCTTTTTCATCAGTTGGTTGTCTAGACGGGCTGAACATACATTCAAATGAGTTTGCTTTTGAGGGATCTGTTTCAACTGGTCATATTAACAGAC AAATGGAGTCTCCTCTGGACAAAGCTGAAAAGTTCAAGAGCATCAAAAGCGACGT GGGTAGTACAGGGACATTA TTGTCAGTCTATATTGGGGACTC GGTTGGAGATTTGCTTTGCTTGTTGGAGGCAGATATTGGTATTGTTGTTGGATCAAGCACAACCTTGCGGAGAGTGGGCAAACAGTTTGGTGTTTCATTTGTTCCTCTGTTCACTGGGTTGGTAGAGAAGCAGAGGCGAATAGAAAAGGAAGAATCATCCATCTTCAAGGCACGGTCTGGAATTCTTTATACGGTTTCTAGCTGGTCGGAGGTACAGGCTTTCACCCTGGGAAATGATTTCAGCTGATTGCTGGTGGCCTTGTGAATCGTTTTCCTTGGCAAACAAGTGTACAAGACTGGTGCCAATTGATGGACTTGATACGAGTAAAACTCGATGTGGCCATTTTATTAAAGCCGCATGCGTGCCGACTCTCTTCCTGTACGAATGAATTGAATACCTTGTGTTGTGCGATGGTTTTGTATGATCAATGTGTCATTGATTACACAATCGATGGACCCCTTTTCATTCGGGGGTCATTTC ATATATATATTTTTACTTTAATTTCCGGAGTGTTTCCTGGCATTGCAACATAGTGATGCACCCGAGTGTAACTGTAGAGATGGTGTTTGTAGCAATAAAAAGTTGATTGCTGGAGTGGTCATCC ]
[+] EMBL CB684750 [ CGTGTCTACCTCCGCCTCCCCCCTTTCCCTCCTGCCACCTCTCTTTATTATTGGTCAAGAACAAGACCTGCAGCTGCAGGGCCCAACCACCCCATCCCTAGGCGCATGTCGACGTCCTCTACTGCCGCGGCGGTCGTTGCCGAGGGCTCCGCCGCTCGCCGCTTCTGGATCGCCGCCGCCTCGAGGGAGGCCGCCTTCGCCGCCTACACGCCCTTCCTCGTCTCCCTCGCCGCCGGGGCCCTCCGCCTGGATTCCTTCCGCCAATACATCGCCCAGGATGCCTACTTCCTCCACGCCTTCGCCCGCGCCTATGAGATGGCCGAGGAGTGCGCCGATGACGACGACGACAAGGCCACCATCGTCGTCCTCAGGAAGGCCATCCTCCGCGAGCTCAACCTCCACGCTTCCGTCCTTCAGGAATGGGGAGTCGATCCCAACAAAGAAATCCCTCCAATCCCAGCCACAACTAAGTACACTGATTTCTTACTTGCAACTTCCACTGGAAAGGTTGATGGTGGGAAAGGTTCTGATAAAATGGTCACACCATTCGAGAAGACGAAAATTGCTGCATACACTGTTGGGGCTATGACCCCATGCATGAGGCTTTATGCGTATCTGGGCAAAGAACTTGCAGTTTTCTTGAAACAGGATGAAAATCACCCATACAAGAAATGGATTGAGACTTATGCATCCAGTGATTTTGAGAATAACGCACTCCAAATAGAAGAGTTGCTTGATAAACTAAGTGTCTCTCTAACTGGCGAGGAGCTTGAGATTATTGGGAAGCTCTACCAGCAAGCTATGAGGCTGGAAGTTGAGTT ]
[+] EMBL CB631419 [ TCCTGCCACCTCTCTTTATTATTGGTCAAGAACAAGACCTGCAGCTGCAGGGCCCAACCACCCCATCCCTAGGCGCATGTCGACGTCCTCTACTGCCGCGGCGGTCGTTGCCGAGGGCTCCGCCGCCCGCCGCTTCTGGATCGCCGCCGCCTCGAGGGAGGCCGCCTTCGCCGCCTACACGCCCTTCCTCGTCTCCCTCGCCGCCGGGGCCCTCCGCCTGGATTCCTTCCGCCAATACATCGCCCAGGATGCCTACTTCCTCCACGCCTTCGCCCGCGCCTATGAGATGGCCGAGGAGTGCGCCGATGACGACGACGACAAGGCCACCATCGTCGTCCTCAGGAAGGCCATCCTCCGCGAGCTCAACCTCCACGCTTCCGTCCTTCAGGAATGGGGAGTCGATCCCAACAAAGAAATCCCTCCAATCCCAGCCACAACTAAGTACACTGATTTCTTACTTGCAACTTCCACTGGAAAGGTTGATGGTGGGAAAGGTTCTGATAAAATGGTCACACCATTCGAGAAGACGAAAATTGCTGCATACACTGTTGGGGCTATGACCCCATGCATGAGGCTTTATGCGTATCTGGGCAAAGAACTTGCAGTTTTCTTGAAACAGGATGAAAATCACCCATACAAGAAATGGATTGAGACTTATGCATCCAGTGATTTTGAGAATAACGCACTCCAAATAGAAGAGTTGCTTGATAAACTAAGTGTCTCTCTAACTGGCGAGGAGCTTGAGATTATTGGGAAGCTCTACCAGCAAGCTATGAGGCTGGAAAGTGAGTTCTTCTCTGCTCAGCCAGTAGACC ]
[+] EMBL CA765691 [ CTACCAGCAAGCTATGAGGCTGGAAGTTGAGTTCTTCTCTGCTCAGCCAGTAGACCAACCTGCTGTAGCTCCACTCTCAAGATATTGTGGTCCGAAAGATAAGCTCTTGATATTTTGTGATTTTGATTTGACATGCACTGTTGTTGATTCATCTGCCATTTTGGCGGAGATTGCAATCTTGTCACACCAAAAGGCTAGTCAAGGTGGGGCTGATAGTTCCCTTGATCGTACAAAATCAGCGGACTTGAGAAATTCATGGAACATGCTCTCAAATCAATACATGGAAGAGTATGAGCAATGCATAGCAAGCTTGCTTCCTCCAGAAGAAGCAAGGTCACTAGACTATGATCAACTGTATAAAGGTTTGGAGGTGCTATCGCAGTTTGAGAAACTTGCAAACTCTAGGGTGGTTGATTCTGGTGTCCTGAGGGGAATGAATTTAGATGACATCCGAAAAGCTGGAGAGAGGCTTATTCTGCAAGATGGATGCAAAAATTTCTTTCAAAAGATTGGCAAAACAAGGGAGAACCTCAATTTAGATGTCCATATTCTTTCCTATTGCTGGTGCGCAGATCTTATAAGGTCAGCTTTTTCATCAGTTGGTTGTCTAGACGGGCTGAACATACATTCAAATGAGTTTGCTTTTGAGGGATCTGTTTCAACTGGTCATATTAACAGAC AAATGGAGTCTCCTCTGGACAAAGCTGAAAAGNTCAAGAGCATCAAAAGCGACGTGGGGTAGTACAGGGACATTATTTGTCAGTCTATGNTGGGGACTCGGGTGGGAGATTTGCTTTGCTTGNTG ]
[+] EMBL CA999210 [ GCGGACTTGAGAAATTCATGGAACATGCTCTCAAATCAATACATGGAAGAGTATGAGCAATGCATAGCAAGCTTGCTTCCTCCAGAAGAAGCAAGGTCACTAGACTATGATCAACTGTATAAAGGTTTGGAGGTGCTATCGCAGTTTGAGAAACTTGCAAACTCTAGGGTGGTTGATTCTGGTGTCCTGAGGGGAATGAATTTAGATGACATCCGAAAAGCTGGAGAGAGGCTTATTCTGCAAGATGGATGCAAATTTTTTTTTCAAAAGATTGGCAAAACAAGGGAGAACCTCAATTTAGATGTCCATATTCTTTCCTATTGCTGGTGCGCAGATCTTATAAGGTCAGCTTTTTCATCAGTTGGTTGTCTAGACGGGCTGAACATACATTCAAATGAGTTTGCTTTTGAGGGATCTGTTTCAACTGGTCATATTAACAGACAAAATGGAGTCTCCTCTGGACAAAGCTGAAAAGTTCAAGAGCATCAAAAGCGACGT GGGTAGTACAGGGACATTA TTGTCAGTCTATATTGGGGACTC GGTTGGAGATTTGCT ]
[-] EMBL CB684751 [ TGCAAAATTTTTTTTCAAAAGATTGGCAAAACAAGGGAGACCCTCAATTTAGATGTCCATATTCTTTCCTATTGCTGGTGCGCAGATCTTATAAGGTCAGCTTTTTCATCAGTTGGTTGTCTAGACGGGCTGAACATACATTCAAATGAGTTTGCTTTTGAGGGATCTGTTTCAACTGGTCATATTAACAGAC AAATGGAGTCTCCTCTGGACAAAGCTGAAAAGTTCAAGAGCATCAAAAGCGACTT GGGTAGTACAGGGACATTA TTGTCAGTCTATATTGGGGACTC GGTTGGAGATTTGCTTTGCTTGTTGGAGGCAGATATTGGTATTGTTGTTGGATCAAGCACAACCTTGTGGAGAGTGGGCAAACAGTTTGGTGTTTCATTTGTTCCTCTGTTCACTGGGTTGGTAGAGAAGCAGAGGGGAATAGAAAAGGAAGAATCATCCATCTTCAAGGCACGGTTTGGAATTCTTTATACGGTTTATACCTGGTCGGAGGTACAGGCTTTCATCCTGGGAAATGATTTCAGCTGATTGCTGGTGGCCTTGTGAATCGTTTTCCTTGGCAAACAATTGTACAAGATTGGTGCCAATTGATGGACTTGATAAGAGTAAAACTGGATGTAGGCATTTTATTAAAGCCTCATG ]
[-] EMBL CA762404 [ ACAAAGCTGGAAAGTTCAAGAGCATCAAAAGCGACGT GGGTAGTACAGGGACATTA TTGTCAGTCTATGTTGGGGACTC GGTTGGAGATNTGCTTTGCTTGTTGGAGGCAGATATTGGTATTGTTGTTGGATCAAGCACAACCTTGCGGAGAGTGGGCAAACAGTTTGGTGTTTCATTTGTTCCTCTGTTCACTGGGTTGGTAGAGAAGCAGAGGCGAATAGAAAAGGAAGAATCATCCATCTTCAAGGCACGGTCTGGAATTCTTTATACGGTTTCTAGCTGGTCGGAGGTACAGGCTTTCATCCTGGGAAATGATTTCAGCTGATTGCTGGTGTCCTTGTGAATCGTTTTCCTTGGCAAACAAGTGTACAAGACTGGTGCTAATTGATGGACTTGATACGAGTAAAACTCGATGTGGCCATTTTATTAAAGCCGCATGCGTGCCGACTCTCTTCCTGTACGAATGAATTGAATACCTTGTGTTGTGCGATGGTTTTGTATGATCAATGTGTCATTGATTACACAATCGATGGACCCCTTTTCATTCGGGGGTCATTTCATATATATATATTTTTACTTTAATTTCCGGAGTGTTTCCTGGCATTGCAACATAGTGATGCACCCGAGTGTAACTGTAGAGATGGTGTTTGTAGCAATAAAAAGTTGATTGCTGGAGTGGTCAAAAAAAAAA]
consensusID : consensus_11744#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 712 fasta sequence
[TCCCCTAGCCACCACGCCGCGGGGCGTACGGGCAACGAAGGGAACTAGACAGACGTCATGACCGGTACGGGGCCGACACCGCCGGGAGAGGGGAGACGAGGGGGACCCGAGGCGCGGACGGCGGCACACGAGAGTCAGGCCCCCCAGCAGACCGGCCGCGCAGGGCCGAGCAAGCGCTACGTCCGCCTCCCCAGGTCGCAGCCAGGCCACAGCGGGGCCCCCGCGCAGCCACGCGGCTCAGGCTGGTTCCACGGTGCCTCTATGGGAGCGTTGCCCCTGGGGAAACAACGTCTCCAAGGCTGCTGCTACGCAGCTGGCCTTGATGCGAGTACATCTGGATGGGGCCGTTTTATTAAAGCCGCATGCGTACCGACTCTCTTCCTGTACGAATGAATTGAATGCCTTGTGTTGTGGGATGGTTCTGTATGATCAATGTGTCTTTGATTACGCCATCTAAGAATTACCTCCCCCCTTTCGCCCTGTGGTCAAAAAGAGCATTCTTATGACTGAACTGTATTTGGAGATTGATCTCACTTTTTAAACTTTAAAATAAATAGTGTTGTAGTTGTTAAGAGTAAATCATAGATCTATGTACATCCGAAATGGTCATGTTATTTATAAAAAAAAAAACGACCACTGCGAGCGGCCACATGCATGAAGCTGGAGTCATTCAATAGTGTGCTCGTTGCACGCTTGGAGTATCATGNTGTAT]
[-] EMBL CA758389 [TCCCCTAGCCACCACGCCGCGGGGCGTACGGGCAACGAAGGGAACTAGACAGACGTCATGACCGGTACGGGGCCGACACCGCCGGGAGAGGGGAGACGAGGGGGACCCGAGGCGCGGACGGCGGCACACGAGAGTCAGGCCCCCCAGCAGACCGGCCGCGCAGGGCCGAGCAAGCGCTACGTCCGCCTCCCCAGGTCGCAGCCAGGCCACAGCGGGGCCCCCGCGCAGCCACGCGGCTCAGGCTGGTTCCACGGTGCCTCTATGGGAGCGTTGCCCCTGGGGAAACAACGTCTCCAAGGCTGCTGCTACGCAGCTGGCCTTGATGCGAGTACATCTGGATGGGGCCGTTTTATTAAAGCCGCATGCGTACCGACTCTCTTCCTGTACGAATGAATTGAATGCCTTGTGTTGTGGGATGGTTCTGTATGATCAATGTGTCTTTGATTACGCCATCTAAGAATTACCTCCCCCCTTTCGCCCTGTGGTCAAAAAGAGCATTCTTATGACTGAACTGTATTTGGAGATTGATCTCACTTTTTAAACTTTAAAATAAATAGTGTTGTAGTTGTTAAGAGTAAATCATAGATCTATGTACATCCGAAATGGTCATGTTATTTATAAAAAAAAAAACGACCACTGCGAGCGGCCACATGCATGAAGCTGGAGTCATTCAATAGTGTGCTCGTTGCACGCTTGGAGTATCATGNTGTAT]
consensusID : consensus_11744#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence
[GGCTGAACATACATTCAAATGAGTTTGCTTCTGAGGGATCTGTTTCAACTGGTCATATTAACAGACAAATGGAGTCTCCTCTGGACAAAGCTGAAAAGTTCAAGAGCATCAAAAGCGACGTGGGTAGTACAGGGACATTATTGTCAGTCTATGTTGGGGACTCGGTTGGAGATTTGCTTTGCTTGTTGGAGGCAGATATTGGTATTGTTGTTGGATCAAGCACAACCTTGCGGAGAGTGGGCAAACAGTTTGGCGTTTCATTTGTTCCTCTGTTCACTGGGTTGGTAGAGAAGCAGAGGCGAATAGAAAAGGAAGAATCATCCATTTTCAAGGCACGGTCTGGAATTCTTTATACGGTTTCTAGCTGGTCGGAGGTACAGGCTTTCATCCTGGGAAATGATTTCAGCTGATTGCTGGTGTCCTTGTGAATCGTTTTCCTTGGCAAACAAGTGTACAAGACTGGTGCTAATTGATGGACTTGATACGAGTAAAACTCGATGTGGCCATTTTATTAAAACCGCATGCGTGCCGACTCTCTTCCTGTACGAATGAATTGAATACCTTGTGTTGTGCGATGGTTTTGTATGATCAATGTGTCATTGATTACACAATCGATGGACCCCTTTTCATTCGGGGGTCATTTCATATATATATTTTTACTTTAAAAAAAAAAAAAAA]
[-] EMBL CA762405 [GGCTGAACATACATTCAAATGAGTTTGCTTCTGAGGGATCTGTTTCAACTGGTCATATTAACAGACAAATGGAGTCTCCTCTGGACAAAGCTGAAAAGTTCAAGAGCATCAAAAGCGACGTGGGTAGTACAGGGACATTATTGTCAGTCTATGTTGGGGACTCGGTTGGAGATTTGCTTTGCTTGTTGGAGGCAGATATTGGTATTGTTGTTGGATCAAGCACAACCTTGCGGAGAGTGGGCAAACAGTTTGGCGTTTCATTTGTTCCTCTGTTCACTGGGTTGGTAGAGAAGCAGAGGCGAATAGAAAAGGAAGAATCATCCATTTTCAAGGCACGGTCTGGAATTCTTTATACGGTTTCTAGCTGGTCGGAGGTACAGGCTTTCATCCTGGGAAATGATTTCAGCTGATTGCTGGTGTCCTTGTGAATCGTTTTCCTTGGCAAACAAGTGTACAAGACTGGTGCTAATTGATGGACTTGATACGAGTAAAACTCGATGTGGCCATTTTATTAAAACCGCATGCGTGCCGACTCTCTTCCTGTACGAATGAATTGAATACCTTGTGTTGTGCGATGGTTTTGTATGATCAATGTGTCATTGATTACACAATCGATGGACCCCTTTTCATTCGGGGGTCATTTCATATATATATTTTTACTTTAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11744#0 TGGGTTGGGTTGGGTTGGGTCCGTCCGATGAATGTGAAGAAATCCAAGACTGACGAGACG 60
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 ACAGGGCCGGTGCGGTGCGACGGCGGTCGGCTTCGGCTTCTTCGTTTCCATCGCCGGCGG 120
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 CGGCGCCTCCTTCCCTTCCCTTCCCTTCTATGCGCGGCCTCCTCCGCCGTGTCTACCTCC 180
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 GCCTCCCCCCTTTCCCTCCTGCCACCTCTCTTTATTATTGGTCAAGAACAAGACCTGCAG 240
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 CTGCAGGGCCCAACCACCCCATCCCTAGGCGCATGTCGACGTCCTCTACTGCCGCGGCGG 300
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 TCGTTGCCGAGGGCTCCGCCGCTCGCCGCTTCTGGATCGCCGCCGCCTCGAGGGAGGCCG 360
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 CCTTCGCCGCCTACACGCCCTTCCTCGTCTCCCTCGCCGCCGGGGCCCTCCGCCTGGATT 420
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 CCTTCCGCCAATACATCGCCCAGGATGCCTACTTCCTCCACGCCTTCGCCCGCGCCTATG 480
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 AGATGGCCGAGGAGTGCGCCGATGACGACGACGACAAGGCCACCATCGTCGTCCTCAGGA 540
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 AGGCCATCCTCCGCGAGCTCAACCTCCACGCTTCCGTCCTTCAGGAATGGGGAGTCGATC 600
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 CCAACAAAGAAATCCCTCCAATCCCAGCCACAACTAAGTACACTGATTTCTTACTTGCAA 660
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 CTTCCACTGGAAAGGTTGATGGTGGGAAAGGTTCTGATAAAATGGTCACACCATTCGAGA 720
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 AGACGAAAATTGCTGCATACACTGTTGGGGCTATGACCCCATGCATGAGGCTTTATGCGT 780
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 ATCTGGGCAAAGAACTTGCAGTTTTCTTGAAACAGGATGAAAATCACCCATACAAGAAAT 840
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 GGATTGAGACTTATGCATCCAGTGATTTTGAGAATAACGCACTCCAAATAGAAGAGTTGC 900
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 TTGATAAACTAAGTGTCTCTCTAACTGGCGAGGAGCTTGAGATTATTGGGAAGCTCTACC 960
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 AGCAAGCTATGAGGCTGGAAGTTGAGTTCTTCTCTGCTCAGCCAGTAGACCAACCTGTTG 1020
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 TAGCTCCACTCTCAAGATATTGTGGTCCGAAAGATAAGCTCTTGATATTTTGTGATTTTG 1080
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 ATTTGACATGCACTGTTGTTGATTCATCTGCCATTTTGGCGGAGATTGCAATCTTGTCAC 1140
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 ACCAAAAGGCTAGTCAAGGTGGGGCTGATAGTTCCCTTGATCGTACAAAATCAGCGGACT 1200
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 TGAGAAATTCATGGAACATGCTCTCAAATCAATACATGGAAGAGTATGAGCAATGCATAG 1260
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 CAAGCTTGCTTCCTCCAGAAGAAGCAAGGTCACTAGACTATGATCAACTGTATAAAGGTT 1320
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 TGGAGGTGCTATCGCAGTTTGAGAAACTTGCAAACTCTAGGGTGGTTGATTCTGGTGTCC 1380
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 TGAGGGGAATGAATTTAGATGACATCCGAAAAGCTGGAGAGAGGCTTATTCTGCAAGATG 1440
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 GATGCAAAATTTTTTTTCAAAAGATTGGCAAAACAAGGGAGAACCTCAATTTAGATGTCC 1500
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 ATATTCTTTCCTATTGCTGGTGCGCAGATCTTATAAGGTCAGCTTTTTCATCAGTTGGTT 1560
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 GTCTAGACGGGCTGAACATACATTCAAATGAGTTTGCTTTTGAGGGATCTGTTTCAACTG 1620
consensus_11744#2 ---------GGCTGAACATACATTCAAATGAGTTTGCTTCTGAGGGATCTGTTTCAACTG 51
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 GTCATATTAACAGACAAATGGAGTCTCCTCTGGACAAAGCTGAAAAGTTCAAGAGCATCA 1680
consensus_11744#2 GTCATATTAACAGACAAATGGAGTCTCCTCTGGACAAAGCTGAAAAGTTCAAGAGCATCA 111
consensus_11744#1 ------------------------------------------------------------
consensus_11744#0 AAAGCGACGTGGGTAGTACAGGGACATTATTGTCAGTCTATATTGGGGACTCGGTTGGAG 1740
consensus_11744#2 AAAGCGACGTGGGTAGTACAGGGACATTATTGTCAGTCTATGTTGGGGACTCGGTTGGAG 171
consensus_11744#1 -----------------------------------TCCCCTAGCCACCACGCCGCGGGGC 25
* * ** * * **
consensus_11744#0 ATTTGCTTTGCTTGTTGGAGGCAGATATTGGTATTGTTGTTGGATCAAGCACAACCTTGC 1800
consensus_11744#2 ATTTGCTTTGCTTGTTGGAGGCAGATATTGGTATTGTTGTTGGATCAAGCACAACCTTGC 231
consensus_11744#1 GTACGGGCAACGAAG-GGAACTAGACA--GACGTCATGACCGGTACGGGGCCGACACCGC 82
* * * *** *** * * * * ** * * * ** **
consensus_11744#0 GGAGAGTGGGCAAACAGTTTGGTGTTTCATTTGTTCCTCTGTTCACTGGGTTGGTAGAGA 1860
consensus_11744#2 GGAGAGTGGGCAAACAGTTTGGCGTTTCATTTGTTCCTCTGTTCACTGGGTTGGTAGAGA 291
consensus_11744#1 CGGGAGAGGGGAGACGAGGGGG------ACCCGAGGCGCGG---ACGGCGGCACACGAGA 133
* *** *** * ** ** * * * * * ** * * ****
consensus_11744#0 AGCAGAGGCGAATAGAAAAGGAAGAATCATCCATCTTCAAGGCACGGTCTGGAATTCTTT 1920
consensus_11744#2 AGCAGAGGCGAATAGAAAAGGAAGAATCATCCATTTTCAAGGCACGGTCTGGAATTCTTT 351
consensus_11744#1 GTCAG-GCCCCCCAGCA---GACCGGCCGCGCAGGGCCGAG-CAAGCGCTACGTCCGCCT 188
*** * * ** * ** * ** * ** ** * ** *
consensus_11744#0 ATACGGTTTCTAGCTGGTCGGAGGTACAGGCTTTCATCCTGGGAAATGATTTCAGCTGAT 1980
consensus_11744#2 ATACGGTTTCTAGCTGGTCGGAGGTACAGGCTTTCATCCTGGGAAATGATTTCAGCTGAT 411
consensus_11744#1 CCCCAGGTCGCAGCCAGGCCACAGCG-GGGCCCCCGCGCAGCCACGCGGCTCAGGCTGGT 247
* * * *** * * * *** * * * * * * **** *
consensus_11744#0 TGC-TGGTGGCCTTGTGA-ATCGTTTTCCTTGGC-AAACAA-GTGTACAAGACTGGTGCC 2036
consensus_11744#2 TGC-TGGTGTCCTTGTGA-ATCGTTTTCCTTGGC-AAACAA-GTGTACAAGACTGGTGCT 467
consensus_11744#1 TCCACGGTGCCTCTATGGGAGCGTTGCCCCTGGGGAAACAACGTCTCCAAGGCTGCTGCT 307
* * **** * * ** * **** ** *** ****** ** * **** *** ***
consensus_11744#0 A-ATTGATGGACTTGATACGAGTAAAACTCGATGTGGCCATTTTATTAAAGCCGCATGCG 2095
consensus_11744#2 A-ATTGATGGACTTGATACGAGTAAAACTCGATGTGGCCATTTTATTAAAACCGCATGCG 526
consensus_11744#1 ACGCAGCTGGCCTTGATGCGAGTACATCTGGATGGGGCCGTTTTATTAAAGCCGCATGCG 367
* * *** ****** ****** * ** **** **** ********** *********
consensus_11744#0 TGCCGACTCTCTTCCTGTACGAATGAATTGAATACCTTGTGTTGTGCGATGGTTTTGTAT 2155
consensus_11744#2 TGCCGACTCTCTTCCTGTACGAATGAATTGAATACCTTGTGTTGTGCGATGGTTTTGTAT 586
consensus_11744#1 TACCGACTCTCTTCCTGTACGAATGAATTGAATGCCTTGTGTTGTGGGATGGTTCTGTAT 427
* ******************************* ************ ******* *****
consensus_11744#0 GATCAATGTGTCATTGATTACACAATCGATGGA-------CCCCTTTTCATTCGGGGGTC 2208
consensus_11744#2 GATCAATGTGTCATTGATTACACAATCGATGGA-------CCCCTTTTCATTCGGGGGTC 639
consensus_11744#1 GATCAATGTGTCTTTGATTACGCCATCTAAGAATTACCTCCCCCCTTTCGCCCTGTGGTC 487
************ ******** * *** * * * **** **** * * ****
consensus_11744#0 ATTTCATATATA--TATTTTTACTTTAATTTCCGGAGTGTTTCCTGGCATTGCAACATAG 2266
consensus_11744#2 ATTTCATATATA--TATTTTTACTTTAAAAAAAAAAAAAAA------------------- 678
consensus_11744#1 AAAAAGAGCATTCTTATGACTGAACTGTATTTGGAGATTGATCTCACTTTTTAAACTTTA 547
* ** *** * *
consensus_11744#0 TGATGCACCCGAGTGTAACTGTAGAGATGGTGTTTGTAGCAATAAAAAGTTGATTGCTGG 2326
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 AAATAAATAGTGTTGTAGTTGTTAAGA-GTAAATCATAGATCTATGTACATCCGAAATGG 606
consensus_11744#0 AGTGGTCATCCAAAAAA------------------------------------------- 2343
consensus_11744#2 ------------------------------------------------------------
consensus_11744#1 TCATGTTATTTATAAAAAAAAAAACGACCACTGCGAGCGGCCACATGCATGAAGCTGGAG 666
consensus_11744#0 ----------------------------------------------
consensus_11744#2 ----------------------------------------------
consensus_11744#1 TCATTCAATAGTGTGCTCGTTGCACGCTTGGAGTATCATGNTGTAT 712
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||