These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11746#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 797 fasta sequence [CGGCCCAAATCCGAGAGACCCAGAAGCCGCCGCCGCCGCCGGAGTCTGTTCCTCGAATCCTTCGCCGGAGGTAGCCGCGGACGACGGCCATGC-TCTCC-GCCGCCGCC--TCGGCCATCCCGA-GGC-TCC-GCTGGGCC-GCGCCGCCGC-GGAACCAGTC-TGCGAGGAACCAATGGTTGC-TGCTGC-GGCGGCGTTCCCTCTCCTCCTCACCTCCCTACGTGACGCCCGG-TATCCCGGCGGCG--GCGGCGGCGGCAGGGAGTGGGGCTCTCGAGCCGCCGGACCTGCCCCGCCTC-GCCAACGCGGCACGCAT-CTCTCTCTCGCCGGAAGAGGCTGA-GGAGTTCGCGCCGAAGATTCGGCAGGTGGTGGATTGGTTTGGGCAACTTCAAGCCGTCGATCTTGAATCTGTTGAGCCTTCACTTAGAGCTGGTACTGCGGCAGGTAATTCATTGAGAGAAGACAGGCCTGAAACATTTACTAACAGAGATGCCATAATAGAGTCTGTCCCAAGCTATGATGATCCATACATCAAGGTGCCAAGAGTGCTGAACA-AAGAATGACCTGTAA-TTTGTAGATCAATTTTTTTTTCCGTTGCACAATGTAA-CATGGTTTAGCAATAAATCTTAGTAGTCAAGTTTAGTATCATTTCAACTGAATGATATGGCTCGAGATCATGATGTCAACA-TTTGTAATTTGTTTACTA-TGGAAGCTATTTTTAATAGTTTAATATTGTATTATATTTTCAGACCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU096860 [CGGCCCAAATCCGAGAGACCCAGAAGCCGCCGCCGCCGCCGGAGTCTGTTCCTCGAATCCTTCGCCGGAGGTAGCCGCGGACGACGGCCATGC TCTCC GCCGCCGCC TCGGCCATCCCGA GGC TCC GCTGGGCC GCGCCGCCGC GGAACCAGTC TGCGAGGAACCAATGGTTGC TGCTGC GGCGGCGTTCCCTCTCCTCCTCACCTCCCTACGTGACGCCCGG TATCCCGGCGGCG GNGGCGGCGGCAGGGAGTGGGGCTCTCGAGCCGNCGGACCTG CCCG CTN G CAACGCGG ACGCAT CTNTCTCTCGCCGGAAGAAGCTGANGAAGTTCGCGCCGA ] [+] EMBL AK120336 [ CCAAATCCGAGAGACCCAGAAGCCGCCGCCGCCGCCGGAGTCTGTTCCTCGAATCCTTCGCCGGAGGTAGCCGCGGACGACGGCCATGC TCTCC GCCGCCGCC TCGGCCATCCCGA GGC TCC GCTGGGCC GCGCCGCCGC GGAACCAGTC TGCGAGGAACCAATGGTTGC TGCTGC GGCGGCGTTCCCTCTCCTCCTCACCTCCCTACGTGACGCCCGG TATCCCGGCGGCG GCGGCGGCGGCAGGGAGTGGGGCTCTCGAGCCGCCGGACCTGCCCCGCCTC GCCAACGCGGCACGCAT CTCTCTCTCGCCGGAAGAGGCTGA GGAGTTCGCGCCGAAGATTCGGCAGGTGGTGGATTGGTTTGGGCAACTTCAAGCCGTCGATCTTGAATCTGTTGAGCCTTCACTTAGAGCTGGTACTGCGGCAGGTAATTCATTGAGAGAAGACAGGCCTGAAACATTTACTAACAGAGATGCCATAATAGAGTCTGTCCCAAGCTATGATGATCCATACATCAAGGTGCCAAGAGTGCTGAACA AAGAATGACCTGTAA TTTGTAGATCAA TTTTTTTTCCGTTGCACAATGTAA CATGGTTTAGCAATAAATCTTAGTAGTCAAGTTTAGTATCATTTCAACTGAATGATATGGCTCGAGATCATGATGTCAACA TTTGTAATTTGTTTACTA TGGAAGCTATTTTTAATAGTTTAATATTGTA ] [+] EMBL CF325293 [ CGGAGTCTGTTCCTCGAATCCTTCGCCGGAGGTAGCCGCGGACGACGGCCATGC TCTCC GCCGCCGCC TCGGCCATCCCGA GGC TCC GCTGGGCC GCGCCGCCGC GGAACCAGTC TGCGAGGAACCAATGGTTGC TGCTGC GGCGGCGTTCCCTCTCCTCCTCACCTCCCTACGTGACGCCCGGNTATCCCGGCGGCGNNGCGGCGGCGGCAGGGAGTGGGGCTCTCGAGCCGCCGGACCTGCCCCGCCTC GCCAACGCGGCACGCAT CTCTCTCTCGCCGGAAGAGGCTGA GGAG ] [+] EMBL CF325268 [ CGGAGTCTGTTCCTCGAATCCTTCGCCGGAGGTAGCCGCGGACGACGGCCATGC TCTCC GCCGCCGCC TCGGCCATCCCGA GGC TCC GCTGGGCC GCGCCGCCGC GGAACCAGTC TGCGAGGAACCAATGGTTGC TGCTGC GGCGGCGTTCCCTCTCCTCCTCACCTCCCTACGTGACGCCCGG TATCCCGGCGGCG ] [+] EMBL AU096861 [ CATGCTTTTCCGGCNGCCGGCNTTGGGCCATCCCGAGGGCTTCCGGTTGGGCCGGCGCCGCCGCGGGAACCAGTCTTGCGAGGAACCAATGGTTGCTTGCTGCGGGCGGCGTTCCCTCTCCTCCTCACCTCCCTACGTGACGCCCGG TATCCCGGCGGCG GCGGCGGCGGCAGGGAGTGGGGCTCTCGAGCCGCCGGACCTGCCCCGCCTC GCCAACGCGGCACGCAT CTCTCTCTCGCCGGAAGAGGCTGA GGAGTTCGCGCCGAAGATTCGGCAGGTGGTGGATTGGTTTGGGCAACTTCAAGCCGTCGATCTTGAATCTGTTGAGCCTTCACTTAGAGCTGGTACTGCGGCAGGTAATTCATTGAGAGAAGACAGGCCTGAAACATTTACTAACAGAGATGCCATAATAGAGTCTGTCCCAAGCTATGATGATCCATACATCAAGGTGCCAAGAGTGCTGAACA AAGAATGACCTGTAA TTTGTAGATCAATTTTTTTTTCCGTTGCACAATGTAA CATGGTTTAGCAATAAATCTTAGTAGTCAAGTTTAGTATCATTTCAACTGAATGATATGGCTCGAGATCATGATGTCAACA TTTGTAATTTGTTTACTA TGGAAGCTATTTTTAATAGTTTAATATTGTATTATATTTTCAGACCAGAAAAAAAAAAA ] [+] EMBL BM421131 [ GCGGCGGCGGCAGGGAGTGGGGCTCTCGAGCCGCCGGACCTGCCCCGCCTCTGCCAACGCGGCACGCAT CTCTCTCTCGCCGGAAGAGGCTGA GGAGTTCGCGCCGAAGATTCGGCAGGTGGTGGATTGGTTTGGGCAACTTCAAGCCGTCGATCTTGAATCTGTTGAGCCTTCACTTAGAGCTGGTACTGCGGCAGGTAATTCATTGAGAGAAGACAGGCCTGAAACATTTACTAACAGAGATGCCATAATAGAGTCTGTCCCAAGCTATGATGATCCATACATC AGGTGCCCAGAGTGCTGAACACAAGAATGACCTGTAACTTTGTAGATCAATTTTTTTTTCCGTTGCACAATGTAACCATGGTTTAGCAATAAATCTTAGTAGTCAAGTTTAGTATCATTTCAACTGAATGATATGGCTCGAGATCATGATGTCAACA TTTGTAATTTGTTTACTA TGGAAGCTATTTTTAATAGTTTAATATTGTATTAaaaaa ] [+] EMBL OS1321813 [ CCGCCTC GCCAACGCGGCACG ATNCTCTCTCTCGCCGGAAGAGGCTGA GGAGTTCGCGCCGAAGATTCGGCAGGTGGTGGATTGGTTTGGGCAACTTCAAGCCGTCGATCTTGAATCTGTTGAGCCTTCACTTAGAGCTGGTACTGCGGCAGGTAATTCATTGAGAGAAGACAGGCCTNAAACATTTACTAACAGAGATGCCATAATAGAGTCTGTCCCAAGCTATGATGATCCATACATCAAGGTGCCAAGAGTNCTGAACA AAGAATGACCTGTAA TTTGTAGATCAATTTTTTTTTCCGTTGCACAATGTAA CATGGTTTAGCAATAAATCTTAGTAGTCAAGTTTAGTATCANTTCAACTGAATGATATNGCTCGAGATCATGATGTCAACATTTTGTAATTTGTTTACTATTGGAAGCTATTTTTAATAGTT ] [+] EMBL AU174380 [ AATAGAGTNTGTCCCAAGCTATGATGATCCATACATCAAGGTGCCAANAGTGCTGAACA AAGAATGACCTGTAA TTTGTAGATCAATTTTTTTTTCCGTTGCNCAATGTAA CATGGTTTAGCAATAAATCTTAGTAGTCAAGTTTAGTATCATTTCAACTGAATGATATGGCTCGAGATCATGATGTCAACA TTTGTAATTTGTTTACTA TGGAAGCTATTTTTAATAGTTTAATATTGTATTATATTTTCAGCCCAGAAAAAAAAAAAAAAAAA ] [+] EMBL CF311660 [ AAGAGTGCTGAACA AAGAATGACCTGTAA TTTGTAGATCAATTTTTTTTTCCGTTGCACAATGTAA CATGGTTTAGCAATAAATCTTAGTAGTCAAGTTTAGTATCATTTCAACTGAATGATATGGCTCGAGATCATGATGTCAACA TTTGTAATTTGTTTACTA TGGAAGCTATTTTTAATAGTTTAATATTGTATTATATTTTCAGACCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||