These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11752#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1051 fasta sequence [AGTTCTCGATCTCGATCTGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGGAGGGGCTTCTCCGGGGCGCGTGCGCGCT-GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGGCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAGATGCTTCTACCTCAGCCGCTTCGCCGACGGCAAGCCCTGCCGGCATCGCAGGGCCATAGCCTGGCTTTGCTTCCTCCTCGAC-AAGGGTTGTGCATACAT-AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGTTACACACTGAAATTGTTGTGGATAACAGAACTAAGTTCAGTTCAGTTACCACCAGAGGTAAAGAAATGGNTGATTTAAAAAA] [+] EMBL OSS11782A [AGTTCTCGATCTCGATCTGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATNAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGTAGGGGCTTCTCCGGGGCGCGTGCNC CTNGCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGNCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAAATGCTTCTACC ] [+] EMBL AK060123 [ CTCGATCTGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGGAGGGGCTTCTCCGGGGCGCGTGCGCGCT GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGGCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAGATGCTTCTACCTCAGCCGCTTCGCCGACGGCAAGCCCTGCCGGCATCGCAGGGCCATAGCCTGGCTTTGCTTCCTCCTCGAC AAGGGTTGTGCATACAT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAA ] [+] EMBL AK104184 [ GATCTGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGGAGGGGCTTCTCCGGGGCGCGTGCGCGCT GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGGCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAGATGCTTCTACCTCAGCCGCTTCGCCGACGGCAAGCCCTGCCGGCATCGCAGGGCCATAGCCTGGCTTTGCTTCCTCCTCGAC AAGGGTTGTGCATTCAT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAA ] [+] EMBL AK060127 [ TGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGGAGGGGCTTCTCCGGGGCGCGTGCGCGCT GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGGCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAGATGCTTCTACCTCAGCCGCTTCGCCGACGGCAAGCCCTGCCGGCATCGCAGGGCCATAGCCTGGCTTTGCTTCCTCCTCGAC AAGGGTTGTGCATACAT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGTTACACACTGAAAT ] [+] EMBL OSS13776A [ CGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGNCGGCGGCGAGGGCGGCGGAGGCGAAGACGTAGGGGCTTCTCCGGGGCGCGTGCG GCT GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGNCGGCGGCGGCGTCGTCCGGCTACCACCTGCTGCAGTTGCTAAGATGTTTCTACCTCAGNCGCTTCGn ] [+] EMBL AU095967 [ TTGGCTTCCTCCTCGACAAAGGNTTGTGCATACATAAACATTCGCGACGACGGTGGCAGCGGCTCAGNCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCNTNTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTNTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGTTACACACTGAAATTGTTGTGGATAACAGAACTAAGTTCAGTTCAGTTACCACCAGAGGTAAAGAAATGGTTGATTTAAAAAA] [+] EMBL CB096292 [ ccT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGTCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTGCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCTCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATATCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATCTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGGTTCAGTGCAGAAGTGATAATGGTACACACTGAAATTGGTGNGGATAACAGAACTAAGNTCAGNTCAGNTACCACCAGAGGTAAAGAAATGGNT ] [+] EMBL CA767202 [ ccT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTTTTCCGCCTCTATCCCTCCATGCTTTCACCTGCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCTCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATATCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATCTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCCCATAAGAACAATAGTAGAGAAGATGGCTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGGTACACACTGAAATTGTTGTGGATAACAGAACTAAGTTCAGNTCAGTTACCACCAGAGGTAAAGAAATG ] [+] EMBL AU096468 [ TCCGCCCGCAACNTCTTCCGCATNTATCCCTCCATGCTTTCACCTCCGCCGTNTT CTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTNTATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTNAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTGTCTCATAAGAACNATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGTTACACACTGAAATTGTTGTGGATAACAGAACTAAGTTCAGTTCAGTTACCACCAGAGGTAAAAAAAaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||