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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11768#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3383 fasta sequence
[CGCCGATCGAGCGGGAGGAGGACACCTCCGCACGCAAGCGCCGGGCCGTCGCCGAGGCCGGCCAGCTCCGCGCCCTCCCCGCCTGGAAGCAGGAGGTGAGAGATGAGGAAGGGCGAAGAAGGTTTCATGGTGCATTTACGGGAGGTTTCTCAGCTGGTTATTACAATACCGTTGGCACAAAAGAGGGATGGACTCCACAGACTTTTACATCGTCACGGAAAAATAGGGCTGAGATGAAAAAGCAAAGCATATACAGTTTTCTCGATGAGGAAGACATAAAGGATATGGGAGGTAATGCCTTGGAAACATCTCAGCAGTATGATACATTTGGTTTTACAGCTACAGAACATGCCCGAAAGCAAGCTTCCAAGGAGCAGAAAGAGAGACCATCGGCTATACCTGGGCCTATTCCTGATGAGCTGGTGGTCCCTGCTACTACTTCTATTGGAGTGAAGTTATTGATGAAAATGGGCTGGCGCCAAGGTCGTTCAATTAGAGATGCACATGCTGACTCCTTATACGAATCGCGCAGGGAAGCAAGAAAAGCCTTCCTTGCACTCTCTGGTACAAAAACTGGTGGTCAAAAAATACAAGTTGATTCACACAAGTCTGATAAGGATGATGGTGCCACAGAATCATTTGAGGAGTTACATGCCTCTGGAAATACCCCTGTATACGTTCTTCATCCCAAGCAGGACTTGCATGGGTTAGGTTTTGACCCATTCAAGCATGCTCCTGAGTTTAAAGATAGGAAAAGATTGCAGAAGTCAGCGAGGGACCGTAATAGAAGTGATGTTTCAATGAGGGGGAGTCTTCTGATTTCAAACTCAGGACAATATGCTCCTGGCTTTGGGATTGGAGCACTTGAGGAGCTAGGTGTTGAAGATGAGGATATTTATGCATCAGGTTTTGCTTATGAACAAATGGAAGTTGATATTGAGCCTTCAAAAACAGCCAGCGATAGTAATTATAAACTTGAAGACAGGAAAAGAGGTGTCTTCCTGGCTTTTAAAATCGCCTCAAGTTCTGAGTACAAGCTTGAAAGATTTGATCCTCCTGAGATCCCATCTGATTTTGATGGTCGCCACAAGTTTCTAACTCCACGACAGGATGTTAATAACCTTTCTGATCTGGCTCCTCCTGAGGTTCCTGCTCCAGAAGATACTAGCTTGAGATTATTGATTGAGGGTTGTGCCGCTATGGTTGCTCGTTGTGGGAAACATATTGAGGATTTTTACAAAGAGAAAAGCAAAACAAATACACAGTTTAATTTCCTCAATGAAGGAGATGGCTGTAGCTACTATGCAAGGAAGTTATGGGAGTATCAGCAGAAATATATTGACCAGCAAAAGCCTGATACTGTGCAATCCAAGTCTTCTGACAAGTTGACTGCTGAAAATCGTGGAAAGATTCTTGGTGAAAGGCCCCTTGATAGAAGCACTAAATCATCTAGCTCATCCTTCCCTGCAAAGGAAGCAATTCAACTGCAGTCCAATCTGGCTGACAACTTTGTGAAGCCAATATCTCTTGACGGCCTACCAGAGTATGAAAAGCCTTTCAGAAATGATCCTGCAAAGCAAGCAAGGTTTGAGCAATTTCTTAAGGATAAATACCAAGGAGGCCTTCGCCCTGCAAATCTTATACCTACAAGTACTATGTCAGATGTTGACCGTGCCCGGGAAAGACTAGATTTTGAGGCTGCTGCTGAGACAATTGAAAAGGGCAAGGAAAAAAAGGCTATGGATCCTTTATCATTGTTGGGTTTATCTGGAATAAATGAGCAACGTTTTGTATCATCTACTGAATCAGAGAGATCTATACCTGCACGAGATGAGAAATCAATTTATCCACGAAGGGAGGAATTTGAATGGCGACCATCACCAATACTGTGCAAGCGTTTTGACATAGTTGATCCTTTCATGGGAAAGCCATTTCATGTTCAAAGGCCAAGAAGTAAGATGGACAGCCTTATCTTCATGTCAGAATCCACCACGAGGACAAACGAAGTGGAAAGTTCGAGTATTGCTCCACAGCATACTTCTGTGGCAGGAGCAACAGAGACAGAAGCAAAGGGAGCTGCGACTGACCCTGAAATTGAGTCCAGCAGTGTGCAGAGACCTGTTGATCTTTACAAGGCTATCTTTTCTGATGATTCAGATGATGATATGGCTGAACCTCTTGCTAATCAACCAGTGGATCCAGTAAAGACCAGTGAAGATGCCAATATGGTTCTCAATCGTCTTGTTGCTGAGGATTTCCTAGAATCATTGGGTAAAGAACTGGGGTTGGATGTTCCACCAGAAAAGCCCACACCACCCAATGTCTTATTTAGATCAGAAACACCTTCAACAGCTAATGCAATTGGCATATCTAGAAACAGAAAGGCAATTACTTGTCAGGAAATAAAGGAGAACGAGAGTGCTCTTGACAAGGAGGAAATTGCCAATGCCAGTGCAGATGTTCCATCAGATAATGTTGAAGAGCTTGGTTTGAAATATGAGAAGCAGGAGCATAGAGCTGAGAAAAGCAGGTCACGCTCTTCGCACCGTCAAACCCAAAGTGGTAGTCTAGATTCAGATTCGACCTCTGATCAGCATAGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAACTCCAGGTTCTGATTCTTCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAAAGCATAGAACACGCAGGAGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATTCTAAGAGGAAACACCGTGAGAAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTGATCATGAATATGAGGAAAGACATAAATCCAGTAGTCGAAGATCATCT-GA-TAAA-GACAGATCCAGA-AGG-CGTTCTAGACACCACAAACGTTGAGGAAAAGATTCCACAAAGCATTCATTAGTGATAGCTACAAGAAGTTTT-GAGGGAAAAATCAGTGAAGAGAAATCCCCAATCAAGGAAATTCTGGTAAACTATTT-CAGGACACACATATGGTGACTGTTGAGGCAGATATTCTTATTAAGTGCTTTACACAA-T-TTTTTTCTTAATTAGTTTGCTGTCCTGTAAT-CCTTGGGTGCAACCATTTTTTCTTTTCTGCAATGTACTGCATAGTGCCCCATGTTCACAACATTTA-A--TTGAGTCAGTGGGTTCTGTACATACATGTGCAATCATAGACTATTAGACATACTAGGATCTTCTCTCTATTAATCTACAGGATGTAGTGTTGCTGCAGTTAGTAGGATTTGTAACCGCCCTATTTATGTAACAAACTTTTTTCTCCTTAATTAATTTGCATATTCTCCAAGAAGGAAAAACTATAGGATGGATGCTTATGGAAAGATTGTG]
[+] EMBL AK103574 [CGCCGATCGAGCGGGAGGAGGACACCTCCGCACGCAAGCGCCGGGCCGTCGCCGAGGCCGGCCAGCTCCGCGCCCTCCCCGCCTGGAAGCAGGAGGTGAGAGATGAGGAAGGGCGAAGAAGGTTTCATGGTGCATTTACGGGAGGTTTCTCAGCTGGTTATTACAATACCGTTGGCACAAAAGAGGGATGGACTCCACAGACTTTTACATCGTCACGGAAAAATAGGGCTGAGATGAAAAAGCAAAGCATATACAGTTTTCTCGATGAGGAAGACATAAAGGATATGGGAGGTAATGCCTTGGAAACATCTCAGCAGTATGATACATTTGGTTTTACAGCTACAGAACATGCCCGAAAGCAAGCTTCCAAGGAGCAGAAAGAGAGACCATCGGCTATACCTGGGCCTATTCCTGATGAGCTGGTGGTCCCTGCTACTACTTCTATTGGAGTGAAGTTATTGATGAAAATGGGCTGGCGCCAAGGTCGTTCAATTAGAGATGCACATGCTGACTCCTTATACGAATCGCGCAGGGAAGCAAGAAAAGCCTTCCTTGCACTCTCTGGTACAAAAACTGGTGGTCAAAAAATACAAGTTGATTCACACAAGTCTGATAAGGATGATGGTGCCACAGAATCATTTGAGGAGTTACATGCCTCTGGAAATACCCCTGTATACGTTCTTCATCCCAAGCAGGACTTGCATGGGTTAGGTTTTGACCCATTCAAGCATGCTCCTGAGTTTAAAGATAGGAAAAGATTGCAGAAGTCAGCGAGGGACCGTAATAGAAGTGATGTTTCAATGAGGGGGAGTCTTCTGATTTCAAACTCAGGACAATATGCTCCTGGCTTTGGGATTGGAGCACTTGAGGAGCTAGGTGTTGAAGATGAGGATATTTATGCATCAGGTTTTGCTTATGAACAAATGGAAGTTGATATTGAGCCTTCAAAAACAGCCAGCGATAGTAATTATAAACTTGAAGACAGGAAAAGAGGTGTCTTCCTGGCTTTTAAAATCGCCTCAAGTTCTGAGTACAAGCTTGAAAGATTTGATCCTCCTGAGATCCCATCTGATTTTGATGGTCGCCACAAGTTTCTAACTCCACGACAGGATGTTAATAACCTTTCTGATCTGGCTCCTCCTGAGGTTCCTGCTCCAGAAGATACTAGCTTGAGATTATTGATTGAGGGTTGTGCCGCTATGGTTGCTCGTTGTGGGAAACATATTGAGGATTTTTACAAAGAGAAAAGCAAAACAAATACACAGTTTAATTTCCTCAATGAAGGAGATGGCTGTAGCTACTATGCAAGGAAGTTATGGGAGTATCAGCAGAAATATATTGACCAGCAAAAGCCTGATACTGTGCAATCCAAGTCTTCTGACAAGTTGACTGCTGAAAATCGTGGAAAGATTCTTGGTGAAAGGCCCCTTGATAGAAGCACTAAATCATCTAGCTCATCCTTCCCTGCAAAGGAAGCAATTCAACTGCAGTCCAATCTGGCTGACAACTTTGTGAAGCCAATATCTCTTGACGGCCTACCAGAGTATGAAAAGCCTTTCAGAAATGATCCTGCAAAGCAAGCAAGGTTTGAGCAATTTCTTAAGGATAAATACCAAGGAGGCCTTCGCCCTGCAAATCTTATACCTACAAGTACTATGTCAGATGTTGACCGTGCCCGGGAAAGACTAGATTTTGAGGCTGCTGCTGAGACAATTGAAAAGGGCAAGGAAAAAAAGGCTATGGATCCTTTATCATTGTTGGGTTTATCTGGAATAAATGAGCAACGTTTTGTATCATCTACTGAATCAGAGAGATCTATACCTGCACGAGATGAGAAATCAATTTATCCACGAAGGGAGGAATTTGAATGGCGACCATCACCAATACTGTGCAAGCGTTTTGACATAGTTGATCCTTTCATGGGAAAGCCATTTCATGTTCAAAGGCCAAGAAGTAAGATGGACAGCCTTATCTTCATGTCAGAATCCACCACGAGGACAAACGAAGTGGAAAGTTCGAGTATTGCTCCACAGCATACTTCTGTGGCAGGAGCAACAGAGACAGAAGCAAAGGGAGCTGCGACTGACCCTGAAATTGAGTCCAGCAGTGTGCAGAGACCTGTTGATCTTTACAAGGCTATCTTTTCTGATGATTCAGATGATGATATGGCTGAACCTCTTGCTAATCAACCAGTGGATCCAGTAAAGACCAGTGAAGATGCCAATATGGTTCTCAATCGTCTTGTTGCTGAGGATTTCCTAGAATCATTGGGTAAAGAACTGGGGTTGGATGTTCCACCAGAAAAGCCCACACCACCCAATGTCTTATTTAGATCAGAAACACCTTCAACAGCTAATGCAATTGGCATATCTAGAAACAGAAAGGCAATTACTTGTCAGGAAATAAAGGAGAACGAGAGTGCTCTTGACAAGGAGGAAATTGCCAATGCCAGTGCAGATGTTCCATCAGATAATGTTGAAGAGCTTGGTTTGAAATATGAGAAGCAGGAGCATAGAGCTGAGAAAAGCAGGTCACGCTCTTCGCACCGTCAAACCCAAAGTGGTAGTCTAGATTCAGATTCGACCTCTGATCAGCATAGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAACTCCAGGTTCTGATTCTTCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAAAGCATAGAACACGCAGGAGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATACTAAGAGGAAACACCGTGAGAAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTGATCATGAATATGAGGAAAGACATAAATCCAGTAGTCGAAGATCATCT GA TAAA GACAGATCCAGA AGG CGTTCTAGACACCACAAACGTTGAGGAAAAGATTCCACAAAGCATTCATTAGTGATAGCTACAAGAAGTTTT GAGGGAAAAATCAGTGAAGAGAAATCCCCAATCAAGGAAATTCTGGTAAACTATTT CAGGACACACATATGGTGACTGTTGAGGCAGATATTCTTATTAAGTGCTTTACACAA T TTTTTTCTTAATTAGTTTGCTGTCCTGTAAT CCTTGGGTGCAACCATTTTTTCTTTTCTGCAATGTACTGCATAGTGCCCCATGTTCACAACATTTA A TTGAGTCAGTGGGTTCTGTACATACATGTGCAATCATAGACTATTAGACATACTAGGATCTTCTCTCTATTAATCTACAGGATGTAGTGTTGCTGCAGTTAGTAGGATTTGTAACCGCCCTATTTATGTAACAAACTTTTTTCTCCTTAATTAATTTGCATATTCTCCAAGAAGGAAAAACTATAGGATGGATGCTTATGGAAAGATTGTG]
[+] EMBL CB629767 [ CAGCACTATGATACATTTGGTTTTACAGCTACAGAACATGCCCGAAAGCAAGCTTCCAAGGAGCAGAAAGAGAGACCATCGGCTATACCTGGGCCTATTCCTGATGAGCTGGTGGTCCCTGCTACTACTTCTATTGGAGTGAAGTTATTGATGAAAATGGGCTGGCGCCAAGGTCGTTCAATTAGAGATGCACATGCTGACTCCTTATACGAATCGCGCAGGGAAGCAAGAAAAGCCTTCCTTGCACTCTCTGGTACAAAAACTGATGGTCAAAAAATACAAGTTGATTCACACAAGTCTGATAAGGATGATGGTGCCACAGAATCATTTGAGGAGTTACATGCCTCTGGAAATACCCCTGTATACGTTCTTCATCCCAAGCAGGACTTGCATGGGTTAGGTTTTGACCCATTCAAGCATGCTCCTGAGTTTAAAGATAGGAAAAGATTGCAGAAGTCAGCAAGGGACCGTAATAGAAGTGATGTTTCAATGAGGGGGAGTCTTCTGATTTCAAACTCAGGACAATATGCTCCTGGCTTTGGGATTGGAGCACTTGAGGAGCTAGGTGTTGAAGATGAGGATATTTATGCATCAGGTTTTGCTTATGAACAAATGGAAGTTGATATTGAGCCTTCAAAAACAGCCAGCGATAGTAATTATAAACTTGAAGACAGGAAAAGAGGTGTCTTCCTGGCTTTTAAAATCGCCTCAAGTTCTGAGTACAAGCTTGAAAGATTTGATCCTCCTGAGATCCCATCTGATTTTGATGGTCGCCACAAGTTTCT ]
[+] EMBL CB640477 [ CTATGGTTGCTCGTTGTGGGAAACATATTGAGGATTTTTACAAAGAGAAAAGCAAAACAAATACACAGTTTAATTTCCTCAATGAAGGAGATGGCTGTAGCTACTATGCAAGGAAGTTATGGGAGTATCAGCAGAAATATATTGACCAGCAAAAGCCTGATACTGTGCAATCCATTTCTTCTGACAAGTTGACTGCTGAAAATCGTGGAAAGATTCTTGGTGAAAGGCCCCTTGATAGAAGCACTAAATCATCTAGCTCATCCTTCCCTGCAAAGGAAGCAATTCAACTGCAGTCCAATCTGGCTGACAACTTTGTGAAGCCAATATCTCTTGACGGCCTACCAGAGTATGAAAAGCCTTTCAGAAATGATCCTGCAAAGCAAGCAAGGTTTGAGCAATTTCTTAAGGATAAATACCAAGGAGGCCTTCGCCCTGCAAATCTTATACCTACAAGTACTATGTCAGATGTTGAC ]
[-] EMBL CF323291 [ GATGGCTGTAGCTACTATGCAAGGAAGTTATGGGAGTATCAGCAGAAATATATTGACCAGCAAAAGCCTGATACTGTGCAATCCAAGTCTTCTGACAAGTTGACTGCTGAAAATCGTGGAAAGATTCTTGGTGAAAGGCCCCTTGATAGAAGCACTAAATCATCTAGCTCATCCTTCCCTGCAAAGGAAGCAATTCAACTGCAGTCCAATCTGGCTGACAACTTTGTGAAGCCAATATCTCTTGACGGCCTACCAGAGTATGAAAAGCCTTTCAGAAATGATCCTGCAAAGCAAGCAAGGTTTGAGCAATTTCTTAAGGATAAATACCAAGGAGGCCTTCGCCCTGCAAATCTTATACCTACAAGTACTATGTCAGATGTTGACCGTGCCCGGGAAAGACTAGATTTTGAGGCTGCTGCTGAGACAATTGAAAAGGGCAAGGAAAAAAAGGCTATGGATCCTTTATCATTGTTGGGTTTATCTGGAATAAATGAGCAACGTTTTGTATCATCTACTGAATCAGAGAGATCTATAC ]
[+] EMBL CF323005 [ TTATCATTGTTGGGTTTATCTGGAATAAATGAGCAACGTTTTGTATCATCTACTGAATCAGAGAGATCTATACCTGCACGAGATGAGAAATCAATTTATCCACGAAGGGAGGAATTTGAATGGCGACCATCACCAATACTGTGCAAGCGTTTTGACATAGTTGATCCTTTCATGGGAAAGCCATTTCATGTTCAAAGGCCAAGAAGTAAGATGGACAGCCTTATCTTCATGTCAGAATCCACCACGAGGACAAACGAAGTGGAAAGTTCGAGTATTGCTCCACAGCATACTTCTGTGGCAGGAGCAACAGAGACAGAAGCAAAGGGAGCTGCGACTGACCCTGAAATTGAGTCCAGCAGTGTGCAGAGACCTGTTGATCTTTACAAGGCTATCTTTTCTGATGATTCAGATGATGATATGGCTGAACCTCTTGCTAATCAACCAGTGGATCCAGTAAAGACCAGTGAAGATGCCAATATGGTTCTCAATCGTCTTGTTGCTGAGGATTTCCTAGAATCATTGGGTA ]
[+] EMBL CA766914 [ GACAAGGGGGAAATTGCCAATGCCAGTGCAGATGTTCCATCAGATAATGTTGAAGAGCTTGGTTTGAAATATGAGAAGCAGGAGCATAGAGCTGAGAAGAGCAGGTCACGCTCTTCGCACCGTCAAACCCAAAGTGGTAGTCTAGATTCAGATTCGACCTCTGATCAGCATAGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAACTCCAGGTTCTGATTCTTCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAAAGCATAGAACACGCAGGAGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATTCTAAGAGGAAACACCGTGAGAAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTGATCATGAATATGAGGAAAGACATAAATCCAGTAGTCGAAGATCATCT GA TAAA GACAGATCCAGA AGG CGTTCTAGACACCACAAACGTTGAGGAAAAGATTCCACAAAGCATTCATTAGTGATAGCTACAAGAAGTTTT GAGGGAAAAATCAGTGAAGAGAAATCCCCAATCAAGGAAATTCTGGTAAACTATTT CAGGACACACATATGGTGACTGTTGAGGCAGATATTCTTATTAAGTGCTTTACACAA T TTTTCTCTTAANTAGNTTGCTGNCCTGTAAT CCTTGGGTGCAACCATTTTTTCTTTTCTGCAATGNACTGNATAGGGNCCCATGGTCACAACATTTN A TTGAGTCAGNGGGNTCTGT ]
[-] EMBL CB629768 [ AGTGGTAGTCTAGATTCAGATTCGACCTCTGATCAGCATAGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAACTCCAGGTTCTGATTCTTCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAAAGCATAGAACACGCAGGAGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATTCTAAGAGGAAACACCGTGAGAAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTGATCATGAATATGAGGAAAGACATAAATCCAGTAGTCGAAGATCATCT GA TAAA GACAGATCCAGA AGG CGTTCTAGACACCACAAACGTTGAGGAAAAGATTCCACAAAGCATTCATTAGTGATAGCTACAAGAAGTTTT GAGGGAAAAATCAGTGAAGAGAAATCCCCAATCAAGGAAATTCTGGTAAACTATTT CAGGACACACATATGGTGACTGTTGAGGCAGATATTCTTATTAAGTGCTTTACACAA T TTTTTTCTTAATTAGTTTGCTGTCCTGTAAT CCTTGGGTGCAACCATTTTTTCTTTTCTGCAATGTACTGCATAGTGCCCCATGTTCACAACATTTA A TTGAGTCAGTGGGTTCTGTACATACATGTGCAATCATAGACTATTAGACATACTGGGATCTTCTCTCTATTAATCTACAGGATGTAGTGTTGCTGCAGTTAGTAGGATTTGTAACCGCCCTATTTATGTAACAAACTTTTTTCTCCTTAATTAATTGGCATATTCTCCAAGAA ]
[+] EMBL BI809051 [ aggatTCATCTGGATTAAACGCCAGATCCAGATAGGCCGTTCTAGACACCAC AACGTTGAGGAAAAGATTCCAC AAGCATTCATTAGTGATAGCTACAAGAAGTTTTGGAGGGAAAAATCAGTGAAGAGAAATCCCCTATCAAGGAAATTCTGGTAAACTATTTGCAGGACACACATATGGTGACTGTTGAGCCAGATATTCGTATTAAGTGCTTGACACAAGTGTGTGTTCTTAATTAGTTTGCTGTCCTGTAATCCCTTGGGTGCAACCATTTTTTCTTTTCTGCAATGTACTGCATAGTGCCCCATGTTCACAACAGTTACACCCTGAGTCAGTGGGTTCTGTACATACATGGGCAATCATAGACTATTAGACATACTAGGATCTTCTCTCTATTAATCTACAGGATGTAGTGTT CT CAGTTAGTAGGATTTGTAACCGCCCTATT ]
consensusID : consensus_11768#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 692 fasta sequence
[GCTGAGAAGAGCAGGTCACGCTTTTCGCACCGTCAAACCCAAAGTGGTAGTCTAGATTCAGATTCGACCTCTGATCAGCATAGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAACTCCAGGTTCTGATTCTTCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAAAGCATAGAACACGCAGGAGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATTCTAAGAGGAAACACCGTGAGAAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTGATCATGAATATGAGGAAAGACATAAATCCAGTAGTCGAAGATCATCTGATAAAGACAGATCCAGAAGGCGTTCTAGACACCACAAACGTTGAGGAAAAGATTCCACAAAGCATTCATTAGTGATAGCTACAAGAAGTTTTGAGGGAAAAATCAGTGAAGAGAAATCCCCAATCAAGGAAATTCTGGTAAACTATTTCAGGACACACATATGGTGACTGTTGAGGCAGATATTCTTATTAAGTGCTTTACACAATTTTTCTCTTAATTAGTTTGCTGTCCTGTAATCCTTGGGTGCAACCATTTTTTCTTTTCTGCAATGTACTGCATAGTGCCCCATGTTCACAACATTTAATTGAGTCAGTGGGTTCTGTNCAAAAAAAAAGAAAAA]
[-] EMBL CA761000 [GCTGAGAAGAGCAGGTCACGCTTTTCGCACCGTCAAACCCAAAGTGGTAGTCTAGATTCAGATTCGACCTCTGATCAGCATAGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAACTCCAGGTTCTGATTCTTCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAAAGCATAGAACACGCAGGAGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATTCTAAGAGGAAACACCGTGAGAAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTGATCATGAATATGAGGAAAGACATAAATCCAGTAGTCGAAGATCATCTGATAAAGACAGATCCAGAAGGCGTTCTAGACACCACAAACGTTGAGGAAAAGATTCCACAAAGCATTCATTAGTGATAGCTACAAGAAGTTTTGAGGGAAAAATCAGTGAAGAGAAATCCCCAATCAAGGAAATTCTGGTAAACTATTTCAGGACACACATATGGTGACTGTTGAGGCAGATATTCTTATTAAGTGCTTTACACAATTTTTCTCTTAATTAGTTTGCTGTCCTGTAATCCTTGGGTGCAACCATTTTTTCTTTTCTGCAATGTACTGCATAGTGCCCCATGTTCACAACATTTAATTGAGTCAGTGGGTTCTGTNCAAAAAAAAAGAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11768#0 CGCCGATCGAGCGGGAGGAGGACACCTCCGCACGCAAGCGCCGGGCCGTCGCCGAGGCCG 60
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 GCCAGCTCCGCGCCCTCCCCGCCTGGAAGCAGGAGGTGAGAGATGAGGAAGGGCGAAGAA 120
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 GGTTTCATGGTGCATTTACGGGAGGTTTCTCAGCTGGTTATTACAATACCGTTGGCACAA 180
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 AAGAGGGATGGACTCCACAGACTTTTACATCGTCACGGAAAAATAGGGCTGAGATGAAAA 240
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 AGCAAAGCATATACAGTTTTCTCGATGAGGAAGACATAAAGGATATGGGAGGTAATGCCT 300
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 TGGAAACATCTCAGCAGTATGATACATTTGGTTTTACAGCTACAGAACATGCCCGAAAGC 360
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 AAGCTTCCAAGGAGCAGAAAGAGAGACCATCGGCTATACCTGGGCCTATTCCTGATGAGC 420
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 TGGTGGTCCCTGCTACTACTTCTATTGGAGTGAAGTTATTGATGAAAATGGGCTGGCGCC 480
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 AAGGTCGTTCAATTAGAGATGCACATGCTGACTCCTTATACGAATCGCGCAGGGAAGCAA 540
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 GAAAAGCCTTCCTTGCACTCTCTGGTACAAAAACTGGTGGTCAAAAAATACAAGTTGATT 600
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CACACAAGTCTGATAAGGATGATGGTGCCACAGAATCATTTGAGGAGTTACATGCCTCTG 660
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 GAAATACCCCTGTATACGTTCTTCATCCCAAGCAGGACTTGCATGGGTTAGGTTTTGACC 720
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CATTCAAGCATGCTCCTGAGTTTAAAGATAGGAAAAGATTGCAGAAGTCAGCGAGGGACC 780
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 GTAATAGAAGTGATGTTTCAATGAGGGGGAGTCTTCTGATTTCAAACTCAGGACAATATG 840
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CTCCTGGCTTTGGGATTGGAGCACTTGAGGAGCTAGGTGTTGAAGATGAGGATATTTATG 900
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CATCAGGTTTTGCTTATGAACAAATGGAAGTTGATATTGAGCCTTCAAAAACAGCCAGCG 960
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 ATAGTAATTATAAACTTGAAGACAGGAAAAGAGGTGTCTTCCTGGCTTTTAAAATCGCCT 1020
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CAAGTTCTGAGTACAAGCTTGAAAGATTTGATCCTCCTGAGATCCCATCTGATTTTGATG 1080
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 GTCGCCACAAGTTTCTAACTCCACGACAGGATGTTAATAACCTTTCTGATCTGGCTCCTC 1140
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CTGAGGTTCCTGCTCCAGAAGATACTAGCTTGAGATTATTGATTGAGGGTTGTGCCGCTA 1200
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 TGGTTGCTCGTTGTGGGAAACATATTGAGGATTTTTACAAAGAGAAAAGCAAAACAAATA 1260
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CACAGTTTAATTTCCTCAATGAAGGAGATGGCTGTAGCTACTATGCAAGGAAGTTATGGG 1320
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 AGTATCAGCAGAAATATATTGACCAGCAAAAGCCTGATACTGTGCAATCCAAGTCTTCTG 1380
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 ACAAGTTGACTGCTGAAAATCGTGGAAAGATTCTTGGTGAAAGGCCCCTTGATAGAAGCA 1440
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CTAAATCATCTAGCTCATCCTTCCCTGCAAAGGAAGCAATTCAACTGCAGTCCAATCTGG 1500
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CTGACAACTTTGTGAAGCCAATATCTCTTGACGGCCTACCAGAGTATGAAAAGCCTTTCA 1560
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 GAAATGATCCTGCAAAGCAAGCAAGGTTTGAGCAATTTCTTAAGGATAAATACCAAGGAG 1620
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 GCCTTCGCCCTGCAAATCTTATACCTACAAGTACTATGTCAGATGTTGACCGTGCCCGGG 1680
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 AAAGACTAGATTTTGAGGCTGCTGCTGAGACAATTGAAAAGGGCAAGGAAAAAAAGGCTA 1740
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 TGGATCCTTTATCATTGTTGGGTTTATCTGGAATAAATGAGCAACGTTTTGTATCATCTA 1800
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CTGAATCAGAGAGATCTATACCTGCACGAGATGAGAAATCAATTTATCCACGAAGGGAGG 1860
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 AATTTGAATGGCGACCATCACCAATACTGTGCAAGCGTTTTGACATAGTTGATCCTTTCA 1920
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 TGGGAAAGCCATTTCATGTTCAAAGGCCAAGAAGTAAGATGGACAGCCTTATCTTCATGT 1980
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CAGAATCCACCACGAGGACAAACGAAGTGGAAAGTTCGAGTATTGCTCCACAGCATACTT 2040
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CTGTGGCAGGAGCAACAGAGACAGAAGCAAAGGGAGCTGCGACTGACCCTGAAATTGAGT 2100
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CCAGCAGTGTGCAGAGACCTGTTGATCTTTACAAGGCTATCTTTTCTGATGATTCAGATG 2160
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 ATGATATGGCTGAACCTCTTGCTAATCAACCAGTGGATCCAGTAAAGACCAGTGAAGATG 2220
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CCAATATGGTTCTCAATCGTCTTGTTGCTGAGGATTTCCTAGAATCATTGGGTAAAGAAC 2280
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 TGGGGTTGGATGTTCCACCAGAAAAGCCCACACCACCCAATGTCTTATTTAGATCAGAAA 2340
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 CACCTTCAACAGCTAATGCAATTGGCATATCTAGAAACAGAAAGGCAATTACTTGTCAGG 2400
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 AAATAAAGGAGAACGAGAGTGCTCTTGACAAGGAGGAAATTGCCAATGCCAGTGCAGATG 2460
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 TTCCATCAGATAATGTTGAAGAGCTTGGTTTGAAATATGAGAAGCAGGAGCATAGAGCTG 2520
consensus_11768#1 --------------------------------------------------------GCTG 4
****
consensus_11768#0 AGAAAAGCAGGTCACGCTCTTCGCACCGTCAAACCCAAAGTGGTAGTCTAGATTCAGATT 2580
consensus_11768#1 AGAAGAGCAGGTCACGCTTTTCGCACCGTCAAACCCAAAGTGGTAGTCTAGATTCAGATT 64
**** ************* *****************************************
consensus_11768#0 CGACCTCTGATCAGCATAGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAA 2640
consensus_11768#1 CGACCTCTGATCAGCATAGGAGTAGGGAGAGAAGATCACGCCATAAAATTCGAAGTGGAA 124
************************************************************
consensus_11768#0 CTCCAGGTTCTGATTCTTCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAA 2700
consensus_11768#1 CTCCAGGTTCTGATTCTTCTATTGAGCATCATAGGAGTAAGAAAAGAAAGTCACATTCAA 184
************************************************************
consensus_11768#0 AGCATAGAACACGCAGGAGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATTCTA 2760
consensus_11768#1 AGCATAGAACACGCAGGAGTAGAAGTCCTTATGCTGATTCCAGTGACAGCCAATATTCTA 244
************************************************************
consensus_11768#0 AGAGGAAACACCGTGAGAAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTG 2820
consensus_11768#1 AGAGGAAACACCGTGAGAAAAGGCATCACCGGACTCGCAATCCTGATACTGATTCTAGTG 304
************************************************************
consensus_11768#0 ATCATGAATATGAGGAAAGACATAAATCCAGTAGTCGAAGATCATCTGATAAAGACAGAT 2880
consensus_11768#1 ATCATGAATATGAGGAAAGACATAAATCCAGTAGTCGAAGATCATCTGATAAAGACAGAT 364
************************************************************
consensus_11768#0 CCAGAAGGCGTTCTAGACACCACAAACGTTGAGGAAAAGATTCCACAAAGCATTCATTAG 2940
consensus_11768#1 CCAGAAGGCGTTCTAGACACCACAAACGTTGAGGAAAAGATTCCACAAAGCATTCATTAG 424
************************************************************
consensus_11768#0 TGATAGCTACAAGAAGTTTTGAGGGAAAAATCAGTGAAGAGAAATCCCCAATCAAGGAAA 3000
consensus_11768#1 TGATAGCTACAAGAAGTTTTGAGGGAAAAATCAGTGAAGAGAAATCCCCAATCAAGGAAA 484
************************************************************
consensus_11768#0 TTCTGGTAAACTATTTCAGGACACACATATGGTGACTGTTGAGGCAGATATTCTTATTAA 3060
consensus_11768#1 TTCTGGTAAACTATTTCAGGACACACATATGGTGACTGTTGAGGCAGATATTCTTATTAA 544
************************************************************
consensus_11768#0 GTGCTTTACACAATTTTTTTCTTAATTAGTTTGCTGTCCTGTAATCCTTGGGTGCAACCA 3120
consensus_11768#1 GTGCTTTACACAATTTTTCTCTTAATTAGTTTGCTGTCCTGTAATCCTTGGGTGCAACCA 604
****************** *****************************************
consensus_11768#0 TTTTTTCTTTTCTGCAATGTACTGCATAGTGCCCCATGTTCACAACATTTAATTGAGTCA 3180
consensus_11768#1 TTTTTTCTTTTCTGCAATGTACTGCATAGTGCCCCATGTTCACAACATTTAATTGAGTCA 664
************************************************************
consensus_11768#0 GTGGGTTCTGTACATACATGTGCAATCATAGACTATTAGACATACTAGGATCTTCTCTCT 3240
consensus_11768#1 GTGGGTTCTGTNCAAAAAAAAAGAAAAA-------------------------------- 692
*********** ** * * ** *
consensus_11768#0 ATTAATCTACAGGATGTAGTGTTGCTGCAGTTAGTAGGATTTGTAACCGCCCTATTTATG 3300
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 TAACAAACTTTTTTCTCCTTAATTAATTTGCATATTCTCCAAGAAGGAAAAACTATAGGA 3360
consensus_11768#1 ------------------------------------------------------------
consensus_11768#0 TGGATGCTTATGGAAAGATTGTG 3383
consensus_11768#1 -----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||