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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11783#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1720 fasta sequence
[GCACATCCATAATGGAGCGCGACGCGTGGCTGCTATGTGCAGCGCTCGCCGCGGCGACGGTCGTCTACTACCTCGCCTGCACGACGTCGCGCCGCGCGCAGCGGCGTCGTCTGCCTCCTGGCCCGACGCCGCTGCCGGTGATCGGCAATGTGCTCAGCCTGCGCGGCAACATGCACCACGCGCTGGCGCGCCTCGCGCGCGAGCGGTATGGCCCCGTGATGGCGCTGAAGCTGGGCCTCGTCACCGCCGTGGTCGTCTCCTCGCCCGACGCGGCGAGGGAGGCGTTCACCAAGCACGACCGGCGCCTCGCGGCGCGCGCCGTCCCGGACACCAGCCGCGTGCGCGGGTTCGCCGACCGGTCCATGATATGGCTGCCGAGCTCCGACACGCGCTGGAAGACGCTGCGCGGGGTGGTGGCCACGCACGTCTTCTCGCCACGGAGCATCGCCGCGGCGCGCGGCGTCCGCGAGCGCAAGGTGCGCGACATCGTCGGCTACTTCGCCGCGCACGTCGGGGAGGTGGTCGACGTCGGCGAGGCCGTGTACAGCGGGGTGGTCAACCTCGTGTCGAACGCCTTCTTCTCCGGTGACGTGGTCGACGTCGGCGAGGAGTCGGCGCACGGGCTACGGGAAGCCGTGGAGGACATCATCTTGGCGATCGCGAAGCCCAACGTCTCCGACCTTTTTCCCTTCCTCCGCCCGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAACGCTACGACACGGTGTTCGACATCTTGGACAACATAACCAACAGCCGTTTGGCCGACGCCTCGGCAGGAAACCACGCCGGCGACTTCCTGGACTCCCTCCTCGGCCTCATGTCCTACGGCAAGATCGCTCGCGACGACGTGACAACCATAATGTTCGACGTGTTCGGCGCCGGGACAGACACGATCGCCATCACGGTGCAGTGGGCGATGGCGGAGCTGCTCCGCAACCCGAGCATAATGGCCAAGGCGCGCACAGAGATGGAGGACGTCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACACGGAGAAGTTGCCGTACCTCCGGGCCGTGATAAAGGAGGCAATGCGGCTTCACCCGGTGGCACCGATACTACTGCCGCACCAGGCGGCGGAGGACGGCGTGGAGATCGGCGGCTACGCCGTGCCGAAGGGGTCGACGGTGATCTTCAACGTGTGGGCGATCATGCGTGACCCGACGGCGTGGGAGAGGCCGGACGAGTTCATGCCA-GAGAGATTCCTGCAAAGAGCA-GAGGTAGATTTCCGAGGAAAAGACTTCGAGTTCATGCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGGCAGAGCGCGTCGTGCCATTCATACTGGCGTCGCTGCTGCACGCGTTCGAGTGGAGGCTCCCCGACGGCATGTCGGCTGAGGAGTTGGATGTCAGTGAGAAGTTCACCACAGCCAATGTTCTTACTGTCCCACTGAAGGCCGTCCCCATACTTGCCTCTAGTGCTAGTGAACTACAAGCAAGCTAGCAGGATAGCCTACCTCATGGCGCATTTGCGGGGCTACATTTAAAGTTTAAATATCGAATAATACTATCAAATAAAGCA-CAGCTTCGGTGCATATTTAT-CTTTTGTTT-CTTTGTAATCCTACTTGTTTTTATATTAATGAAATCAGTGTTTAATATATATCATAAGTAAGATAAAAAAAAAAAAAAAAA]
[+] EMBL AK102040 [GCACATCCATAATGGAGCGCGACGCGTGGCTGCTATGTGCAGCGCTCGCCGCGGCGACGGTCGTCTACTACCTCGCCTGCACGACGTCGCGCCGCGCGCAGCGGCGTCGTCTGCCTCCTGGCCCGACGCCGCTGCCGGTGATCGGCAATGTGCTCAGCCTGCGCGGCAACATGCACCACGCGCTGGCGCGCCTCGCGCGCGAGCGGTATGGCCCCGTGATGGCGCTGAAGCTGGGCCTCGTCACCGCCGTGGTCGTCTCCTCGCCCGACGCGGCGAGGGAGGCGTTCACCAAGCACGACCGGCGCCTCGCGGCGCGCGCCGTCCCGGACACCAGCCGCGTGCGCGGGTTCGCCGACCGGTCCATGATATGGCTGCCGAGCTCCGACACGCGCTGGAAGACGCTGCGCGGGGTGGTGGCCACGCACGTCTTCTCGCCACGGAGCATCGCCGCGGCGCGCGGCGTCCGCGAGCGCAAGGTGCGCGACATCGTCGGCTACTTCGCCGCGCACGTCGGGGAGGTGGTCGACGTCGGCGAGGCCGTGTACAGCGGGGTGGTCAACCTCGTGTCGAACGCCTTCTTCTCCGGTGACGTGGTCGACGTCGGCGAGGAGTCGGCGCACGGGCTACGGGAAGCCGTGGAGGACATCATCTTGGCGATCGCGAAGCCCAACGTCTCCGACCTTTTTCCCTTCCTCCGCCCGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAACGCTACGACACGGTGTTCGACATCTTGGACAACATAACCAACAGCCGTTTGGCCGACGCCTCGGCAGGAAACCACGCCGGCGACTTCCTGGACTCCCTCCTCGGCCTCATGTCCTACGGCAAGATCGCTCGCGACGACGTGACAACCATAATGTTCGACGTGTTCGGCGCCGGGACAGACACGATCGCCATCACGGTGCAGTGGGCGATGGCGGAGCTGCTCCGCAACCCGAGCATAATGGCCAAGGCGCGCACAGAGATGGAGGACGTCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACACGGAGAAGTTGCCGTACCTCCGGGCCGTGATAAAGGAGGCAATGCGGCTTCACCCGGTGGCACCGATACTACTGCCGCACCAGGCGGCGGAGGACGGCGTGGAGATCGGCGGCTACGCCGTGCCGAAGGGGTCGACGGTGATCTTCAACGTGTGGGCGATCATGCGTGACCCGACGGCGTGGGAGAGGCCGGACGAGTTCATGCCA GAGAGATTCCTGCAAAGAGCA GAGGTAGATTTCCGAGGAAAAGACTTCGAGTTCATGCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGGCAGAGCGCGTCGTGCCATTCATACTGGCGTCGCTGCTGCACGCGTTCGAGTGGAGGCTCCCCGACGGCATGTCGGCTGAGGAGTTGGATGTCAGTGAGAAGTTCACCACAGCCAATGTTCTTACTGTCCCACTGAAGGCCGTCCCCATACTTGCCTCTAGTGCTAGTGAACTACAAGCAAGCTAGCAGGATAGCCTACCTCATGGCGCATTTGCGGGGCTACATTTAAAGTTTAAATATCGAATAATACTATCAAATAAAGCA CAGCTTCGGTGCATATTTAT CTTTTGTTT CTTTGTAATCCTACTTGTTTTTATATTAATGAAATC ]
[+] EMBL AF488522 [ GACGCGTGGCTGCTATGTGCAGCGCTCGCCGCGGCGACGGTCGTCTACTACCTCGCCTGCACGACGTCGCGCCGCGCGCAGCGGCGTCGTCTGCCTCCTGGCCCGACGCCGCTGCCGGTGATCGGCAATGTGCTCAGCCTGCGCGGCAACATGCACCACGCGCTGGCGCGCCTCGCGCGCGAGCGGTATGGCCCCGTGATGGCGCTGAAGCTGGGCCTCGTCACCGCCGTGGTCGTCTCCTCGCCCGACGCGGCGAGGGAGGCGTTCACCAAGCACGACCGGCGCCTCGCGGCGCGCGCCGTCCCGGACACCAGCCGCGTGCGCGGGTTCGCCGACCGGTCCATGATATGGCTGCCGAGCTCCGACACGCGCTGGAAGACGCTGCGCGGGGTGGTGGCCACGCACGTCTTCTCGCCACGGAGCATCGCCGCGGCGCGCGGCGTCCGCGAGCGCAAGGTGCGCGACATCGTCGGCTACTTCGCCGCGCACGTCGGGGAGGTGGTCGACGTCGGCGAGGCCGTGTACAGCGGGGTGGTCAACCTCGTGTCGAACGCCTTCTTCTCCGGTGACGTGGTCGACGTCGGCGAGGAGTCGGCGCACGGGCTACGGGAAGCCGTGGAGGACATCATCTTGGCGATCGCGAAGCCCAACGTCTCCGACCTTTTTCCCTTCCTCCGCCCGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAACGCTACGACACGGTGTTCGACATCTTGGACAACATAACCAACAGCCGTTTGGCCGACGCCTCGGCAGGAAACCACGCCGGCGACTTCCTGGACTCCCTCCTCGGCCTCATGTCCTACGGCAAGATCGCTCGCGACGACGTGACAACCATAATGTTCGACGTGTTCGGCGCCGGGACAGACACGATCGCCATCACGGTGCAGTGGGCGATGGCGGAGCTGCTCCGCAACCCGAGCATAATGGCCAAGGCGCGCACAGAGATGGAGGACGTCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACACGGAGAAGTTGCCGTACCTCCGGGCCGTGATAAAGGAGGCAATGCGGCTTCACCCGGTGGCACCGATACTACTGCCGCACCAGGCGGCGGAGGACGGCGTGGAGATCGGCGGCTACGCCGTGCCGAAGGGGTCGACGGTGATCTTCAACGTGTGGGCGATCATGCGTGACCCGACGGCGTGGGAGAGGCCGGACGAGTTCATGCCA GAGAGATTCCTGCAAAGAGCA GAGGTAGATTTCCGAGGAAAAGACTTCGAGTTCATGCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGGCAGAGCGCGTCGTGCCATTCATACTGGCGTCGCTGCTGCACGCGTTCGAGTGGAGGCTCCCCGACGGCATGTCGGCTGAGGAGTTGGATGTCAGTGAGAAGTTCACCACAGCCAATGTTCTTACTGTCCCACTGAAGGCCGTCCCCATACTTGCCTCTAGTGCTAGTGAACTACAAGCAAGCTAGCAGGATAGCCTACCTCATGGCGCATTTGCGGGGCTACATTTAAAGTTTAAATATCGAATAATACTATCAAATAAAGCA CAGCTTCGGTGCATATTTATACTTTTGTTTCCTTTGTAATCCTACTTGTTTTTATATTAATGAAATCAGTGTTTAATATATATCATAAGTAAGATAAAAAAAAAAAAAAAAA]
[+] EMBL BI808700 [ CGACGGTGATCTTC ACGTGT GGCGATCATGCGTGACCCGACGGCGTGGGAGA GCCGGACGAGTTCATGCCACGAGAGATTCCTGCAAAGAGCACGAGGTAGATTTCCGAGGAAAAGACTTCGAGTTCAT CC TTC GGGCCGGAAGGA GCTGTGCCCGGGGTT CCGATGGCAGAGCGCGTCGT CCATTCATACTGGCGTCGCTGCTGCACGCGTTCGAGTGGAGGCTCCCCGACGGCATGTCGGCTGAGGAGTTGGATGTCAGTGAGAAGTTCACCACAGCCAATGTTCTTACTGTCCCACTGAAGGCCGTCCCCATACTTGCCTCTAGTGCTAGTGAACTACAAGCAAGCTAGCAGGATAGCCTACCTCATGGCGCATTTGCGGGGCTACATTTAAAGTTTAAATATCGAATAATACTATCAAATAAAGCA CAGCTTCGGTGCATATTTAT CTTTTGTTT CTTTGTAATCCTACTTGTTTTTATATTAATGAAATCAGTGTTTAATATAaaaaaaaaa ]
[+] EMBL BI813388 [ CGAGTTCATGCCA GAGAGATTCCT CAAAGACCA GA GTAGATTTCCGAGGAAAAGACTTCGAGTTCAT CC TTC GGGCCGGAAGGAGGCTGTGCCCGGGGTT CCGATGGCAGAGCGCGTCGT CCATTCATACTGGCGTCGCTGCTGCACGCGTTCGAGTGGAGGCTCCCCGACGGCATGTCGGCTGAGGAGTTGGATGTCAGTGAGAAGTTCACCACAGCCAATGTTCTTACTGTCCCACTGAAGGCCGTCCCCATACTTGCCTCTAGTGCTAGTGAACTACAAGCAAGCTAGCAGGATAGCCTACCTCATGGCGCATTTGCGGGGCTACATTTAAAGTTTAAATATCGAATAATACTATCAAATAAAGCACCAGCTTCGGTGCATATTTAT CTTTTGTTT CTTTGTAATCCTACTTGTTTTTATATTAAAAAAAaaa ]
consensusID : consensus_11783#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1665 fasta sequence
[GCGTACACGCGCACGTCCGCAATGGAGCGCGAGGCGTGGCTGCTATGTGCAGCGCTCGCCGCGGCGATGGTCTACTACTACTACTACTACCTCGCCTGCACGACGCGCCGCGCACAGCGGCGTCTGCCTCCTGGGCCGACGCCGCTGCCGGTGATCGGCAACGTGCTCAGCCTGAGCGGCGACATGCACCACGAGCTTGCGCGCCTCGCACGGGAGCAGTACGGGCCCGTGATGACGCTGAAGCTGGGCCTCTTCACCGCCGTGGTCGTCTCCTCGCCCGACGCGGCGAGGGAGGCGTTCACCAAGCACGACCGGCGCCTCGCGGCGCGCACGGTGCCGGACATCAGCCGCGCGCGCGGGTTAACCGGCCGGTCCATGATATGGCTGCCGAGCTCCGACCCGCGCTGGAAGACGCTGCGCAGCGCGGTGGCCACGCACTTCTTCTCGCCACGGAGCCTCGCCGCTGCCCGCGGCGTCCGCGAGCGCAAGGTGCGGGACATCGTCAACTACTTCGCCGGGCACGCCGCGGAGGTGATCGACGTCGGCGAGGCCGTGTACGGCGGCGTTATCAACATCGTGTCGAACGCCTTCTTCTCCGCCGATGTGGTTGACGTCGGCAAGGAGTCGGCGCACGGGTTACGGGAAACATTGGAGGACATCATCTTGGCGATCGCGAAGCCGAACGTCTCCGACCTTTTCCCCTTCCTCCGCCGGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAGCGCTACGACAAGGTGTTCGGCATCTTAGATGACAAAATCAACAGCCGCTTGGCCGACGCCGACGCTGACGCCTCGACGAAGAAGCACGGCGACTTCCTGGACTCCCTCCTCGAGCTCATGTCCGCCGGCAAGATCGCCTGCGACGACGTGACCACCGTAATGTTTGACGCCTTCGGCGCCGGGACCGACACGATCTCCAACACGGTGGTCTGGGCAATGGCGGAGCTACTCCGCAACCCGAGCATAATGGCGAAGGTGCGCGCGGAGATGGAGGACGTCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACACCGAGAAGCTGCCGTACCTCCGGGCCGTGATAAAGGAGGCAATGCGGCTTCACCCGGTGGCGCCGATCCTCCTGCCTCACCGGGCGGCGGAGGACGGCGTGGAGATCGGCGGCTACGCCGTGCCGAAGGGCTCGACTGTGATATTCAATGTGTGGACTATCATG-CGAGACCCTGCAGCGTGGGAGAGGCCGGAGGAGTTCATGCCGGAGAGGTTCCTGCAAAGAGCAGAGGTGGATTTCCGAGGTAAAGACTTCGAGTTCATCCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGACAGAGCGCGTCGTGCCATTCATTTTGGCGTCGCTGCTTCATGCGTTCGAGTGGAGGCTCCCTGTCGGTGTGGCAGCGGAGACTTTGGATCTTAGTGAGAAGTTTACTACTGTCAATGTTCTTGTTACTCCACTCAAGGCCATCCCCATACTTGCCTCTCATCAAATTTAAGTGTAGTAGTGGTACGTACTAGGATACTAGCATACTGTCTGCATGTTCACGAGAATAGGTTTACTTCACAGTTTAAATGTCAAATAAAACTATTAGAAGATACTACTGCCNCTTCTCTTAAAAAAA]
[+] EMBL AF488521 [GCGTACACGCGCACGTCCGCAATGGAGCGCGAGGCGTGGCTGCTATGTGCAGCGCTCGCCGCGGCGATGGTCTACTACTACTACTACTACCTCGCCTGCACGACGCGCCGCGCACAGCGGCGTCTGCCTCCTGGGCCGACGCCGCTGCCGGTGATCGGCAACGTGCTCAGCCTGAGCGGCGACATGCACCACGAGCTTGCGCGCCTCGCACGGGAGCAGTACGGGCCCGTGATGACGCTGAAGCTGGGCCTCTTCACCGCCGTGGTCGTCTCCTCGCCCGACGCGGCGAGGGAGGCGTTCACCAAGCACGACCGGCGCCTCGCGGCGCGCACGGTGCCGGACATCAGCCGCGCGCGCGGGTTAACCGGCCGGTCCATGATATGGCTGCCGAGCTCCGACCCGCGCTGGAAGACGCTGCGCAGCGCGGTGGCCACGCACTTCTTCTCGCCACGGAGCCTCGCCGCTGCCCGCGGCGTCCGCGAGCGCAAGGTGCGGGACATCGTCAACTACTTCGCCGGGCACGCCGCGGAGGTGATCGACGTCGGCGAGGCCGTGTACGGCGGCGTTATCAACATCGTGTCGAACGCCTTCTTCTCCGCCGATGTGGTTGACGTCGGCAAGGAGTCGGCGCACGGGTTACGGGAAACATTGGAGGACATCATCTTGGCGATCGCGAAGCCGAACGTCTCCGACCTTTTCCCCTTCCTCCGCCGGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAGCGCTACGACAAGGTGTTCGGCATCTTAGATGACAAAATCAACAGCCGCTTGGCCGACGCCGACGCTGACGCCTCGACGAAGAAGCACGGCGACTTCCTGGACTCCCTCCTCGAGCTCATGTCCGCCGGCAAGATCGCCTGCGACGACGTGACCACCGTAATGTTTGACGCCTTCGGCGCCGGGACCGACACGATCTCCAACACGGTGGTCTGGGCAATGGCGGAGCTACTCCGCAACCCGAGCATAATGGCGAAGGTGCGCGCGGAGATGGAGGACGTCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACACCGAGAAGCTGCCGTACCTCCGGGCCGTGATAAAGGAGGCAATGCGGCTTCACCCGGTGGCGCCGATCCTCCTGCCTCACCGGGCGGCGGAGGACGGCGTGGAGATCGGCGGCTACGCCGTGCCGAAGGGCTCGACTGTGATATTCAATGTGTGGACTATCATG CGAGACCCTGCAGCGTGGGAGAGGCCGGAGGAGTTCATGCCGGAGAGGTTCCTGCAAAGAGCAGAGGTGGATTTCCGAGGTAAAGACTTCGAGTTCATCCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGACAGAGCGCGTCGTGCCATTCATTTTGGCGTCGCTGCTTCATGCGTTCGAGTGGAGGCTCCCTGTCGGTGTGGCAGCGGAGACTTTGGATCTTAGTGAGAAGTTTACTACTGTCAATGTTCTTGTTACTCCACTCAAGGCCATCCCCATACTTGCCTCTCATCAAATTTAAGTGTAGTAGTGGTACGTACTAGGATACTAGCATACTGTCTGCATGTTCACGAGAATAGGTTTACTTCACAGTTTAAATGTCAAATAAAACTATTAGAAGATAaaaaaa ]
[+] EMBL CB633187 [ CGCAATGGAGCGCGAGGCGTGGCTGCTATGTGCAGCGCTCGCCGCGGCGATGGTCTACTACTACTACTACTACCTCGCCTGCACGACGCGCCGCGCACAGCGGCGTCTGCCTCCTGGGCCGACGCCGCTGCCGGTGATCGGCAACGTGCTCAGCCTGAGCGGCGACATGCACCACGAGCTTGCGCGCCTCGCACGGGAGCAGTACGGGCCCGTGATGACGCTGAAGCTGGGCCTCTTCACCGCCGTGGTCGTCTCCTCGCCCGACGCGGCGAGGGAGGCGTTCACCAAGCACGACCGGCGCCTCGCGGCGCGCACGGTGCCGGACATCAGCCGCGCGCGCGGGTTAACCGGCCGGTCCATGATATGGCTGCCGAGCTCCGACCCGCGCTGGAAGACGCTGCGCAGCGCGGTGGCCACGCACTTCTTCTCGCCACGGAGCCTTGCCGCTGCCCGCGGCGTCCGCGAGCGCAAGGTGCGGGACATCGTCAACTACTTCGCCGGGCACGCCGCGGAGGTGATCGACGTCGGCGAGGCCGTGTACGGCGGCGTTATCAACATCGTGTCGAACGCCTTCTTCTCCGCCGATGTGGTTGACGTCGGCAAGGAGTCGGCGCACGGGTTACGGGAAACATTGGAGGACATCATCTTGGCGATCGCGAAGCCGAACGTCTCCGACCTTTTCCCCTTCCTCCGCCGGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAGCGCTACGACAAGGTGTTCGGCATCTTAGATGACAAAATCAACAGCCGCTTGGCCGACGCCGACGCTGACGCCTCGACGAAG AGCACGGCGACTTCCTGGACT CCTCCTCGAGCTCAT ]
[-] EMBL CB633188 [ GACCACCGTAATGTTTGACGCCTTCGGCGCCGGGACCGACACGATCTCCAACACGGTGGTCTGGGCAATGGCGGAGCTACTCCGCGACCCGAGCATAATGGCGAAGGTGCGCGCGGAGATGGAGGACGTCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACACCGAGAAGCTGCCGTACCTCCGGGCCGTGATAAAGGAGGCAATGCGGCTTCACCCGGTGGCGCCGATCCTCCTGCCTCACCGGGCGGCGGAGGACGGCGTGGAGATCGGCGGCTACGCCGTGCCGAAGGGCTCGACTGTGATATTCAATGTGTGGACTATCATG CGAGACCCTGCAGCGTGGGAGAGGCCGGAGGAGTTCATGCCGGAGAGGTTCCTGCAAAGAGCAGAGGTGGATTTCCGAGGTAAAGACTTCGAGTTCATCCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGACAGAGCGCGTCGTGCCATTCATTTTGGCGTCGCTGCTTCATGCGTTCGAGTGGAGGCTCCCTGTCGGTGTGGCAGCGGAGACTTTGGATCTTAGTGAGAAGTTTACTACTGTCAATGTTCTTGTTACTCCACTCAAGGCCATCCCCATACTTGCCTCTCATCAAATTTAAGTGTAGTAGTGGTACGTACTAGGATACTAGCATACTGTCTGCATGTTCACGAGAATAGGTTTACTTCCCAGTTTAAATGTCAAATAAAACTATTAGAAGAT ]
[+] EMBL BQ907748 [ GAGCCAAT CGGCTTCACCCGGTGGC CCGATCCTCCTGCCTCACCGGGCGGCGGAGGACGGCGTGGAGATCGGCGGCTAC CCGTGCCGAAGGGCTCGACTGTGATATTCAATGTGTGGACTATCATG CGAGACCCTGCAGCGTGGGAGAGGCCGGAGGAGTTCATGCCGGAGAGGTTCCTGCAAAGAGCAGAGGTGGATTTCCGAGGTAAAGACTTCGAGTTCATCCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGACAGAGCGCGTCGTGCCATTCATTTTGGCGTCGCTGCTTCATGCGTTCGAGTGGAGGCTCCCTGTCGGTGTGGCAGCGGAGACTTTGGATCTTAGTGAGAAGTTTACTACTGTCAATGTTCTTGTTACTCCACTCAAGGCCATCCCCATACTTGCCTCTCATCAAATTTAAGTGTAGTAGTGGTACGTACTAGGATACTAGCATACTGTCTGCATGTTCACGAGAATAGGTTTACTTCACAGTTTAAATGTCAAATAAAACTATTAGAAGATACTACTGCCNCTTCTCTTAAAAA ]
[+] EMBL BM038607 [ GTGTGGACTATCATGTCGAGACCCT CAGCGTGGGAGA GCCGGAGGAGTTCATTCCGGAGAGGTTCCTNCAAAGA CAGAGGTGGATTTCCGAGGTAAAGACTTCGAGTTCATCCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGACAGAGCGCGTCGTGCCATTCATTTTGGCGTCGCTGCTTCATGCGTTCGAGTGGAGGCTCCCTGTCGGTGTGGCAGCGGAGACTTTGGATCTTAGTGAGAAGTTTACTACTGTCAATGTTCTTGTTACTCCACTCAAGGCCATCCCCATACTTGCCTCTCATCAAATTTAAGTGTAGTAGTGGTACGTACTAGGATACTAGCATACTGTCTGCATGTTCACGAGAATAGGTTTACTTCACAGTTTAAATGTCAAATAAAACTATTAGAAGATACTACTGCCNCTTCTCTTAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11783#0 ----------GCACATCCATAATGGAGCGCGACGCGTGGCTGCTATGTGCAGCGCTCGCC 50
consensus_11783#1 GCGTACACGCGCACGTCCGCAATGGAGCGCGAGGCGTGGCTGCTATGTGCAGCGCTCGCC 60
**** *** ************ ***************************
consensus_11783#0 GCGGCGACGGTCGTCTACTAC---------CTCGCCTGCACGACGTCGCGCCGCGCGCAG 101
consensus_11783#1 GCGGCGATGGTCTACTACTACTACTACTACCTCGCCTGCACGACG---CGCCGCGCACAG 117
******* **** ******* *************** ******** ***
consensus_11783#0 CGGCGTCGTCTGCCTCCTGGCCCGACGCCGCTGCCGGTGATCGGCAATGTGCTCAGCCTG 161
consensus_11783#1 CGGCGT---CTGCCTCCTGGGCCGACGCCGCTGCCGGTGATCGGCAACGTGCTCAGCCTG 174
****** *********** ************************** ************
consensus_11783#0 CGCGGCAACATGCACCACGCGCTGGCGCGCCTCGCGCGCGAGCGGTATGGCCCCGTGATG 221
consensus_11783#1 AGCGGCGACATGCACCACGAGCTTGCGCGCCTCGCACGGGAGCAGTACGGGCCCGTGATG 234
***** ************ *** *********** ** **** *** ** *********
consensus_11783#0 GCGCTGAAGCTGGGCCTCGTCACCGCCGTGGTCGTCTCCTCGCCCGACGCGGCGAGGGAG 281
consensus_11783#1 ACGCTGAAGCTGGGCCTCTTCACCGCCGTGGTCGTCTCCTCGCCCGACGCGGCGAGGGAG 294
***************** *****************************************
consensus_11783#0 GCGTTCACCAAGCACGACCGGCGCCTCGCGGCGCGCGCCGTCCCGGACACCAGCCGCGTG 341
consensus_11783#1 GCGTTCACCAAGCACGACCGGCGCCTCGCGGCGCGCACGGTGCCGGACATCAGCCGCGCG 354
************************************ * ** ******* ******** *
consensus_11783#0 CGCGGGTTCGCCGACCGGTCCATGATATGGCTGCCGAGCTCCGACACGCGCTGGAAGACG 401
consensus_11783#1 CGCGGGTTAACCGGCCGGTCCATGATATGGCTGCCGAGCTCCGACCCGCGCTGGAAGACG 414
******** *** ******************************* **************
consensus_11783#0 CTGCGCGGGGTGGTGGCCACGCACGTCTTCTCGCCACGGAGCATCGCCGCGGCGCGCGGC 461
consensus_11783#1 CTGCGCAGCGCGGTGGCCACGCACTTCTTCTCGCCACGGAGCCTCGCCGCTGCCCGCGGC 474
****** * * ************* ***************** ******* ** ******
consensus_11783#0 GTCCGCGAGCGCAAGGTGCGCGACATCGTCGGCTACTTCGCCGCGCACGTCGGGGAGGTG 521
consensus_11783#1 GTCCGCGAGCGCAAGGTGCGGGACATCGTCAACTACTTCGCCGGGCACGCCGCGGAGGTG 534
******************** ********* *********** ***** ** *******
consensus_11783#0 GTCGACGTCGGCGAGGCCGTGTACAGCGGGGTGGTCAACCTCGTGTCGAACGCCTTCTTC 581
consensus_11783#1 ATCGACGTCGGCGAGGCCGTGTACGGCGGCGTTATCAACATCGTGTCGAACGCCTTCTTC 594
*********************** **** ** ***** ********************
consensus_11783#0 TCCGGTGACGTGGTCGACGTCGGCGAGGAGTCGGCGCACGGGCTACGGGAAGCCGTGGAG 641
consensus_11783#1 TCCGCCGATGTGGTTGACGTCGGCAAGGAGTCGGCGCACGGGTTACGGGAAACATTGGAG 654
**** ** ***** ********* ***************** ******** * *****
consensus_11783#0 GACATCATCTTGGCGATCGCGAAGCCCAACGTCTCCGACCTTTTTCCCTTCCTCCGCCCG 701
consensus_11783#1 GACATCATCTTGGCGATCGCGAAGCCGAACGTCTCCGACCTTTTCCCCTTCCTCCGCCGG 714
************************** ***************** ************* *
consensus_11783#0 CTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAACGCTACGACACGGTGTTCGACATC 761
consensus_11783#1 CTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAGCGCTACGACAAGGTGTTCGGCATC 774
*********************************** ********** ******** ****
consensus_11783#0 TTGGACAACATAACCAACAGCCGTTTGGCCGACGCCTCGGCAGGAAACCACGC------- 814
consensus_11783#1 TTAGATGACAAAATCAACAGCCGCTTGGCCGACGCCGACGCTGACGCCTCGACGAAGAAG 834
** ** *** ** ********* ************ ** * * *
consensus_11783#0 --CGGCGACTTCCTGGACTCCCTCCTCGGCCTCATGTCCTACGGCAAGATCGCTCGCGAC 872
consensus_11783#1 CACGGCGACTTCCTGGACTCCCTCCTCGAGCTCATGTCCGCCGGCAAGATCGCCTGCGAC 894
************************** ********* ************ *****
consensus_11783#0 GACGTGACAACCATAATGTTCGACGTGTTCGGCGCCGGGACAGACACGATCGCCATCACG 932
consensus_11783#1 GACGTGACCACCGTAATGTTTGACGCCTTCGGCGCCGGGACCGACACGATCTCCAACACG 954
******** *** ******* **** ************** ********* *** ****
consensus_11783#0 GTGCAGTGGGCGATGGCGGAGCTGCTCCGCAACCCGAGCATAATGGCCAAGGCGCGCACA 992
consensus_11783#1 GTGGTCTGGGCAATGGCGGAGCTACTCCGCAACCCGAGCATAATGGCGAAGGTGCGCGCG 1014
*** ***** *********** *********************** **** **** *
consensus_11783#0 GAGATGGAGGACGTCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACACGGAGAAGTTG 1052
consensus_11783#1 GAGATGGAGGACGTCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACACCGAGAAGCTG 1074
************************************************** ****** **
consensus_11783#0 CCGTACCTCCGGGCCGTGATAAAGGAGGCAATGCGGCTTCACCCGGTGGCACCGATACTA 1112
consensus_11783#1 CCGTACCTCCGGGCCGTGATAAAGGAGGCAATGCGGCTTCACCCGGTGGCGCCGATCCTC 1134
************************************************** ***** **
consensus_11783#0 CTGCCGCACCAGGCGGCGGAGGACGGCGTGGAGATCGGCGGCTACGCCGTGCCGAAGGGG 1172
consensus_11783#1 CTGCCTCACCGGGCGGCGGAGGACGGCGTGGAGATCGGCGGCTACGCCGTGCCGAAGGGC 1194
***** **** ************************************************
consensus_11783#0 TCGACGGTGATCTTCAACGTGTGGGCGATCATGCGTGACCCGACGGCGTGGGAGAGGCCG 1232
consensus_11783#1 TCGACTGTGATATTCAATGTGTGGACTATCATGCGAGACCCTGCAGCGTGGGAGAGGCCG 1254
***** ***** ***** ****** * ******** ***** * ***************
consensus_11783#0 GACGAGTTCATGCCAGAGAGATTCCTGCAAAGAGCAGAGGTAGATTTCCGAGGAAAAGAC 1292
consensus_11783#1 GAGGAGTTCATGCCGGAGAGGTTCCTGCAAAGAGCAGAGGTGGATTTCCGAGGTAAAGAC 1314
** *********** ***** ******************** *********** ******
consensus_11783#0 TTCGAGTTCATGCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGGCAGAG 1352
consensus_11783#1 TTCGAGTTCATCCCGTTCGGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCCGATGACAGAG 1374
*********** ****************************************** *****
consensus_11783#0 CGCGTCGTGCCATTCATACTGGCGTCGCTGCTGCACGCGTTCGAGTGGAGGCTCCCCGAC 1412
consensus_11783#1 CGCGTCGTGCCATTCATTTTGGCGTCGCTGCTTCATGCGTTCGAGTGGAGGCTCCCTGTC 1434
***************** ************* ** ******************** * *
consensus_11783#0 GGCATGTCGGCTGAGGAGTTGGATGTCAGTGAGAAGTTCACCACAGCCAATGTTCTTACT 1472
consensus_11783#1 GGTGTGGCAGCGGAGACTTTGGATCTTAGTGAGAAGTTTACTACTGTCAATGTTCTTGTT 1494
** ** * ** *** ****** * *********** ** ** * ********** *
consensus_11783#0 GTCCCACTGAAGGCCGTCCCCATACTTGCCTCT-----AGTGCTAGTGAACTACAAGCAA 1527
consensus_11783#1 ACTCCACTCAAGGCCATCCCCATACTTGCCTCTCATCAAATTTAAGTGTAGTAGTGGTAC 1554
***** ****** ***************** * * **** * ** * *
consensus_11783#0 G--CTAGCAGGATAGCCTACCTCATGGCGCATTTGCGGGGCTACATTTAA-----AGTTT 1580
consensus_11783#1 GTACTAGGATACTAGCATACTGTCTG-CATGTTCACGAGAATAGGTTTACTTCACAGTTT 1613
* **** * **** *** ** * ** ** * ** **** *****
consensus_11783#0 AAATATCGAATAATACTATCAAATAAAGC-ACAGCTTCGGTGCATATTTATCTTTTGTTT 1639
consensus_11783#1 AAATGTCAAATAAAACTATTAGAAGATACTACTGCCNCTTCTCTTAAAAAAA-------- 1665
**** ** ***** ***** * * * * ** ** * * ** *
consensus_11783#0 CTTTGTAATCCTACTTGTTTTTATATTAATGAAATCAGTGTTTAATATATATCATAAGTA 1699
consensus_11783#1 ------------------------------------------------------------
consensus_11783#0 AGATAAAAAAAAAAAAAAAAA 1720
consensus_11783#1 ---------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||