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Oryza sativa
cluster # 11805 cluster # 11805       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11805#0 length = 1947 sequences # 5  
consensus_11805#1 length = 710 sequences # 3  
consensus_11805#2 length = 433 sequences # 1  

consensusID : consensus_11805#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1947
fasta sequence
                              [TGCGTCTCTCCCTCCTCCCTCTGCAGCGCCGAGCCGGAGGAATCCTGACCGGAGGTCGGCCTCGCCCTCCCCTCCTCGCGCGCGCGCCGCCGCCGCCGGGAAGGCCGGCTGGCGAGGTAGTCGAAAAATATCGCCTCTGAAGGTCAGCACTGAGGCATGGGGGAGTGCAGTGAGCACAGGTGTTGGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAGGATGTGCTCACCGTGGTGCCGCGGGTTTGCAAATCCT-GGGGGCGGGTGGTTGCAGGGCCTTACTGCTGGCAGGAGATCGACATCCAGGAGTGGAGCCAGCAGCAGAGCAAGCCGGACCAGCTCAAGCGCATGGTTCGCATGCTCGTCGCCCGAAGCGGCGGCTCGTTCCACCGCATTAGCGTGTCCGGCCTGCCTGGCGATCCATTGTTCACCTTCATTGGGGACCATGCACGGTCACTTAAAACCATGGAGCTTCCAAGGAGTGATATCAGCGACTCCTTAGTGGAAAATGTTGCGCCAAGATTGTCCAACGTTACATTCTTGGACATAAGCAGCTGTACTAAGATCGGTGCTCGTGCTCTAGAAGCATTCGGCAAGCATTGTAAATCCCTGATCGGACTTCGGCGAGTCATGCACCCTACAGATGTTGTCGGTAGGGCCAGTCAACATGATGAGGCTCGTGCTATTGCTTGCAATATGCCAAAGCTCCGTCATCTTGAGATAGGGTACATGCTCATTGCAACGAAGGCTGTTGTTGAGATTGCCTCTCAGTGTCATGATCTCAAATTCTTAGATCTGCGTGGCTGCTGGAATGTTGACGATAAACTATTGCAAGAGAGCTATCCTGGGCTGAAAGTCGTTGGCCCCTATGTGGACGACTGCTATGAGAACAGCTTCTGGGAGGAGTGTTCCGATGACTCGGATGATTCCATCTATTGGGAGCTCATGGATGATGATTATTATGCGGCGGGGAGCGATGACGAGGGCATATGGGACGATGGTCAAGGTCTTGAGGGCTTAGAAGTAAGGTTTTATGGTGGTGGATTTAGTGAAAGCCATGCTGGTTTTGATTGGCCGCCATCTCCATGAAAGCTGCATCAAGATCTTCAGAAAAGTGCCTGTGTATTCCTGCTGCTTCCTCTTATGTGCTTCAAGTTTTAAACATCAGCTTCCTTAGTACTAGTATGTGCTTGTATTTGTGTCATCCCCTAGCTTGCAGATATTTGAAGCCAACTATCTGGTAGTATAAAATGTTTGGTGTTTATACATAAAAAATAGCAACATGGTCTGGTAGTACTGAAACAATGTTGCTACAAATTTGTTTCAGTACTAGTAATTTATTTCAGAGGTTTT-CCATGCGCCTGTAATCCTGTACTAGTTCTCTTTTATACTGCGGTTCTATGACTTCTACTACTACTATCTCCCTTTCTATTGGACAAGATGTGGCCTGGTATGCCAGGGACTACAGTATTGAAGGTGTAGTACTGCATGTCATAGCAATTCCAAGAAGTAACAGTGAGATGCCCACCCTGCATTTAGACCAGACAATGGTGGCCACTGGTGCCCAGATCCTAGATTTTGTCCTAAAATCTTGTGATGAAGCAGTGTTTTTTTCTTTTGTCAGATGGATTGGAATCAGTTACATGGCGTGTCAGTTGTCTCTTGCAAGGCAAGCTACACCTGACATTTGCCATGCATCACTGCTTCCACGGCGTTCTCTTTCTGACTCTGCAACTTTGGCAATGCACGCACCACTGCTGGGCATTCCAATGGGAGCAGCTATCGATATGTACGTTTGGTGTTTTATCAGGTCTGGTCTGAATAGTGAATGCCCAATGGACAATCCCACATTATTCTGTGGCTTTTCCTTTGTTTGAGGTGGGATCCTGTGCTAATAATGAATTTTAAATCGTTGGATTAAAAAAA]

[+] EMBL AK070008             [TGCGTCTCTCCCTCCTCCCTCTGCAGCGCCGAGCCGGAGGAATCCTGACCGGAGGTCGGCCTCGCCCTCCCCTCCTCGCGCGCGCGCCGCCGCCGCCGGGAAGGCCGGCTGGCGAGGTAGTCGAAAAATATCGCCTCTGAAGGTCAGCACTGAGGCATGGGGGAGTGCAGTGAGCACAGGTGTTGGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAGGATGTGCTCACCGTGGTGCCGCGGGTTTGCAAATCCT GGGGGCGGGTGGTTGCAGGGCCTTACTGCTGGCAGGAGATCGACATCCAGGAGTGGAGCCAGCAGCAGAGCAAGCCGGACCAGCTCAAGCGCATGGTTCGCATGCTCGTCGCCCGAAGCGGCGGCTCGTTCCACCGCATTAGCGTGTCCGGCCTGCCTGGCGATCCATTGTTCACCTTCATTGGGGACCATGCACGGTCACTTAAAACCATGGAGCTTCCAAGGAGTGATATCAGCGACTCCTTAGTGGAAAATGTTGCGCCAAGATTGTCCAACGTTACATTCTTGGACATAAGCAGCTGTACTAAGATCGGTGCTCGTGCTCTAGAAGCATTCGGCAAGCATTGTAAATCCCTGATCGGACTTCGGCGAGTCATGCACCCTACAGATGTTGTCGGTAGGGCCAGTCAACATGATGAGGCTCGTGCTATTGCTTGCAATATGCCAAAGCTCCGTCATCTTGAGATAGGGTACATGCTCATTGCAACGAAGGCTGTTGTTGAGATTGCCTCTCAGTGTCATGATCTCAAATTCTTAGATCTGCGTGGCTGCTGGAATGTTGACGATAAACTATTGCAAGAGAGCTATCCTGGGCTGAAAGTCGTTGGCCCCTATGTGGACGACTGCTATGAGAACAGCTTCTGGGAGGAGTGTTCCGATGACTCGGATGATTCCATCTATTGGGAGCTCATGGATGATGATTATTATGCGGCGGGGAGCGATGACGAGGGCATATGGGACGATGGTCAAGGTCTTGAGGGCTTAGAAGTAAGGTTTTATGGTGGTGGATTTAGTGAAAGCCATGCTGGTTTTGATTGGCCGCCATCTCCATGAAAGCTGCATCAAGATCTTCAGAAAAGTGCCTGTGTATTCCTGCTGCTTCCTCTTATGTGCTTCAAGTTTTAAACATCAGCTTCCTTAGTACTAGTATGTGCTTGTATTTGTGTCATCCCCTAGCTTGCAGATATTTGAAGCCAACTATCTGGTAGTATAAAATGTTTGGTGTTTATACATAAAAAATAGCAACATGGTCTGGTAGTACTGAAACAATGTTGCTACAAATTTGTTTCAGTACTAGTAATTTATTTCAGAGGTTTT CCATGCGCCTGTAATCCTGTACTAGTTCTCTTTTATACTGCGGTTCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF276374             [           CTCCTCCCTCTGCAGCGCCGAGCCGGAGGAATCCTGACCGGAGGTCGGCCTCGCCCTCCCCTCCTCGCGCGCGCGCCGCCGCCGCCGGGAAGGCCGGCTGGCGAGGTAGTCGAAAAATATCGCCTCTGAAGGTCAGCACTGAGGCATGGGGGAGTGCAGTGAGCACAGGTGTTGGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAGGATGTGCTCACCGTGGTGCCGCGGGTTTGCAAATCCTGGGGGGCGGGTGGTTGCAGGGCCTTACTGCTGGCAGGAGATCGACATCCAGGAGTGGAGCCAGCAGCAGAGCAAGCCGGACCAGCTCAAGCGCATGGTTCGCATGCTCGTCGCCCGAAGCGGCGGCTCGTTCCACCGCATTAGCGTGTCCGGCCTGCCTGGCGATCCATTGTTCACCTTCATTGGGGACCATGCACGGTCACTTAAAACCATGGAGCTTCCAAGGAGTGATATCAGCGACTCCTTAGTGGAAAATGTTGCGCCAAGATTGTCCAACGTTACATTCTTGGACATAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF276375             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTGCAAGAGAGCTATCCTGGGCTGAAAGTCGTTGGCCCCTATGTGGACGACTGCTATGAGAACAGCTTCTGGGAGGAGTGTTCCGATGACTCGGATGATTCCATCTATTGGGAGCTCATGGATGATGATTATTATGCGGCGGGGAGCGATGACGAGGGCATATGGGACGATGGTCAAGGTCTTGAGGGCTTAGAAGTAAGGTTTTATGGTGGTGGATTTAGTGAAAGCCATGCTGGTTTTGATTGGCCGCCATCTCCATGAAAGCTGCATCAAGATCTTCAGAAAAGTGCCTGTGTATTCCTGCTGCTTCCTCTTATGTGCTTCAAGTTTTAAACATCAGCTTCCTTAGTACTAGTATGTGCTTGTATTTGTGTCATCCCCTAGCTTGCAGATATTTGAAGCCAACTATCTGGTAGTATAAAATGTTTGGTGTTTATACAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF278367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACGACTGCTATGAGAACAGCTTCTGGGAGGAGTGTTCCGATGACTCGGATGATTCCATCTATTGGGAGCTCATGGATGATGATTATTATGCGGCGGGGAGCGATGACGAGGGCATATGGGACGATGGTCAAGGTCTTGAGGGCTTAGAAGTAAGGTTTTATGGTGGTGGATTTAGTGAAAGCCATGCTGGTTTTGATTGGCCGCCATCTCCATGAAAGCTGCATCAAGATCTTCAGAAAAGTGCCTGTGTATTCCTGCTGCTTCCTCTTATGTGCTTCAAGTTTTAAACATCAGCTTCCTTAGTACTAGTATGTGCTTGTATTTGTGTCATCCCCTAGCTTGCAGATATTTGAAGCCAACTATCTGGTAGTATAAAATGTTTGGTGTTTATACAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C98410               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGTGTTTATACATAAAAATTAGCAACCTGGTCTGGTAGTACTG AACAATGTTGCTACAAA TTGTTTCAGTACTAGTAATTTATTTCAGAGGTTTTCCCATGCGCCTGTAACCCTGTACTAGTTCTCTTTTATAC GCGGTTCTATGACTTCTACTACTACTATCTCCCTTTCTATTGGACAAGATGTGGCCTGGTATGCCAGGGACTACAGTATTGAAGGTGTAGTACTGCATGTCATAGCAATTCCAAGAAGTAACAGTGAGATGCCCACCCTGCATTTAGACCAGACAATGGTGGCCACTGGTGCCCAGATCCTAGATTTTGTCCTAAAATCTTGTGATGAAGCAGTGTTTTTTTCTTTTGTCAGATGGATTGGAATCAGTTACATGGCGTGTCAGTTGTCTCTTGCAAGGCAAGCTACACCTGACATTTGCCATGCATCACTGCTTCCACGGCGTTCTCTTTCTGACTCTGCAACTTTGGCAATGCACGCACCACTGCTGGGCATTCCAATGGGAGCAGCTATCGATATGTACGTTTGGTGTTTTATCAGGTCTGGTCTGAATAGTGAATGCCCAATGGACAATCCCACATTATTCTGTGGCTTTTCCTTTGTTTGAGGTGGGATCCTGTGCTAATAATGAATTTTAAATCGTTGGATTAAAAAAA]


>consensus_11805#0 TGCGTCTCTCCCTCCTCCCTCTGCAGCGCCGAGCCGGAGGAATCCTGACCGGAGGTCGGC CTCGCCCTCCCCTCCTCGCGCGCGCGCCGCCGCCGCCGGGAAGGCCGGCTGGCGAGGTAG TCGAAAAATATCGCCTCTGAAGGTCAGCACTGAGGCATGGGGGAGTGCAGTGAGCACAGG TGTTGGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAG GATGTGCTCACCGTGGTGCCGCGGGTTTGCAAATCCTGGGGGCGGGTGGTTGCAGGGCCT TACTGCTGGCAGGAGATCGACATCCAGGAGTGGAGCCAGCAGCAGAGCAAGCCGGACCAG CTCAAGCGCATGGTTCGCATGCTCGTCGCCCGAAGCGGCGGCTCGTTCCACCGCATTAGC GTGTCCGGCCTGCCTGGCGATCCATTGTTCACCTTCATTGGGGACCATGCACGGTCACTT AAAACCATGGAGCTTCCAAGGAGTGATATCAGCGACTCCTTAGTGGAAAATGTTGCGCCA AGATTGTCCAACGTTACATTCTTGGACATAAGCAGCTGTACTAAGATCGGTGCTCGTGCT CTAGAAGCATTCGGCAAGCATTGTAAATCCCTGATCGGACTTCGGCGAGTCATGCACCCT ACAGATGTTGTCGGTAGGGCCAGTCAACATGATGAGGCTCGTGCTATTGCTTGCAATATG CCAAAGCTCCGTCATCTTGAGATAGGGTACATGCTCATTGCAACGAAGGCTGTTGTTGAG ATTGCCTCTCAGTGTCATGATCTCAAATTCTTAGATCTGCGTGGCTGCTGGAATGTTGAC GATAAACTATTGCAAGAGAGCTATCCTGGGCTGAAAGTCGTTGGCCCCTATGTGGACGAC TGCTATGAGAACAGCTTCTGGGAGGAGTGTTCCGATGACTCGGATGATTCCATCTATTGG GAGCTCATGGATGATGATTATTATGCGGCGGGGAGCGATGACGAGGGCATATGGGACGAT GGTCAAGGTCTTGAGGGCTTAGAAGTAAGGTTTTATGGTGGTGGATTTAGTGAAAGCCAT GCTGGTTTTGATTGGCCGCCATCTCCATGAAAGCTGCATCAAGATCTTCAGAAAAGTGCC TGTGTATTCCTGCTGCTTCCTCTTATGTGCTTCAAGTTTTAAACATCAGCTTCCTTAGTA CTAGTATGTGCTTGTATTTGTGTCATCCCCTAGCTTGCAGATATTTGAAGCCAACTATCT GGTAGTATAAAATGTTTGGTGTTTATACATAAAAAATAGCAACATGGTCTGGTAGTACTG AAACAATGTTGCTACAAATTTGTTTCAGTACTAGTAATTTATTTCAGAGGTTTTCCATGC GCCTGTAATCCTGTACTAGTTCTCTTTTATACTGCGGTTCTATGACTTCTACTACTACTA TCTCCCTTTCTATTGGACAAGATGTGGCCTGGTATGCCAGGGACTACAGTATTGAAGGTG TAGTACTGCATGTCATAGCAATTCCAAGAAGTAACAGTGAGATGCCCACCCTGCATTTAG ACCAGACAATGGTGGCCACTGGTGCCCAGATCCTAGATTTTGTCCTAAAATCTTGTGATG AAGCAGTGTTTTTTTCTTTTGTCAGATGGATTGGAATCAGTTACATGGCGTGTCAGTTGT CTCTTGCAAGGCAAGCTACACCTGACATTTGCCATGCATCACTGCTTCCACGGCGTTCTC TTTCTGACTCTGCAACTTTGGCAATGCACGCACCACTGCTGGGCATTCCAATGGGAGCAG CTATCGATATGTACGTTTGGTGTTTTATCAGGTCTGGTCTGAATAGTGAATGCCCAATGG ACAATCCCACATTATTCTGTGGCTTTTCCTTTGTTTGAGGTGGGATCCTGTGCTAATAAT GAATTTTAAATCGTTGGATTAAAAAAA



consensusID : consensus_11805#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 710
fasta sequence
                              [AGGGGAAGAAATCGAGGCCGTTTAATTATAAAATCCTTAGTAAATCACTTAAATTTTGTAAATTTAAAGGTTAATCTTGCTAGAAAATTACTTAATCTTTGTNCTTGGCACAGGTAGTCGAAAAATATCGCCTCTNAAGGAGAGGAC-GAGACAAGGGGGAGTGCAGTGAGCACAGGTGTTGGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAGGATGTGCTCACCGCGGTGCCGCGGGTTTGCAAATCCTGGGGGCGGGTGGTTGCAGGGCCTTACTGCTGGCAGGAGATCGACATCCAGGAGTGGAGCCAGC-AGCAGAGCAAGCCGGA-CCAGCTCAAGCGCATGGTTCGCATGCTCGTCGCCCGAAGCGGCGGCTCGTTCCACCGCATTAGCGTGTCCGGCCTGCCCGGCGATCCGTTGTTCACCTTCATTGGGGACCAGTTGATGTGATGGAAAAGGACCAAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCCGGTCTATCAGTTGCCAAAATAGTACTAGTGATCCTTGCCTTTTAAATTGCCTGTAGATTGATTATGATGTATGCTGAAAGCAGCAATACAATATCCTGTACATTCCCCCACCATGTCATATGTACCATTAACTGATTCAGTACATATTCTCAATTGGAATATTTTTACTGCAAAAAAAAAAAAAAAAA]

[+] EMBL C71712               [AGGGGAAGAAATCGAGGCCGTTTAATTATAAAATCCTTAGTAAATCACTTAAATTTTGTAAATTTAAAGGTTAATCTTGCTAGAAAATTACTTAATCTTTGTNCTTGGCACAGGTAGTCGAAAAATATCGCCTCTNAAGGTCAGCACTGAGGCATGGGGGAGTGCAGTGAGCACAGGTGTTGGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAGGATGTGCTCACCGTGGTGCCGCGGGTTTGCAAATCCTGGGGGCGGGTGGTTGCAGGGCCTTACTGCTGGCAGGAGATCGACATCCAGGAGTTGAGCCAGCAAGCAGAGCAAGCCGGACCCAGTNAAAGGNCATGGTTCG                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CA763674             [                                                                                                                                            AGAGGAC GAGACAAGGGGGAGTGCAGTGAGCACAGGTGTTGGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAGGATGTGCTCACCGCGGTGCCGCGGGTTTGCAAATCCTGGGGGCGGGTGGTTGCAGGGCCTTACTGCTGGCAGGAGATCGACATCCAGGAGTGGAGCCAGC AGCAGAGCAAGCCGGA CCAGCTCAAGCGCATGGTTCGCATGCTCGTCGCCCGAAGCGGCGGCTCGTTCCACCGCATTAGCGTGTCCGGCCTGCCCGGCGATCCGTTGTTCACCTTCATTGGGGACCAGTTGATGTGATGGAAAAGGACCAAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCCGGTCTATCAGTTGCCAAAATAGTACTAGTGATCCTTGCCTTTTAAATTGCCTGTAGATTGATTATGATGTATGCTGAAAGCAGCAATACAATATCCTGTACATTCCCCCACCATGTCATATGTACCATTAACTGATTCAGTACATATTCTCAATTGGAATATTTTTACTGCAAAAAAAAAAAAAAAAA]
[-] EMBL CA763673             [                                                                                                                                            AGAGGAC GAGACAAGGGGGAGTGCAGTGAGCACAGGTGTTGGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAGGATGTGCTCACCGCGGTGCCGCGGGTTTGCAAATCCTGGGGGCGGGTGGTTGCAGGGCCTTACTGCTGGCAGGAGATCGACATCCAGGAGTGGAGCCAGC AGCAGAGCAAGCCGGA CCAGCTCAAGCGCATGGTTCGCATGCTCGTCGCCCGAAGCGGCGGCTCGTTCCACCGCATTAGCGTGTCCGGCCTGCCCGGCGATCCGTTGTTCACCTTCATTGGGGACCAGTTGATGTGATGGAAAAGGACCAAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCCGGTCTATCAGTTGCCAAAATAGTACTAGTGATCCTTGCCTTTTAAATTGCCTGTAGATTGATTATGATGTATGCTGAAAGCAGCAATACAATATCCTGTACATTCCCCCACCATGTCATATGTACCATTAACTGATTCAGTACATATTCTCAATTGGAATATTTTTACTGCAAAAAAAAAAAAAAAAA]


>consensus_11805#1 AGGGGAAGAAATCGAGGCCGTTTAATTATAAAATCCTTAGTAAATCACTTAAATTTTGTA AATTTAAAGGTTAATCTTGCTAGAAAATTACTTAATCTTTGTNCTTGGCACAGGTAGTCG AAAAATATCGCCTCTNAAGGAGAGGACGAGACAAGGGGGAGTGCAGTGAGCACAGGTGTT GGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAGGATG TGCTCACCGCGGTGCCGCGGGTTTGCAAATCCTGGGGGCGGGTGGTTGCAGGGCCTTACT GCTGGCAGGAGATCGACATCCAGGAGTGGAGCCAGCAGCAGAGCAAGCCGGACCAGCTCA AGCGCATGGTTCGCATGCTCGTCGCCCGAAGCGGCGGCTCGTTCCACCGCATTAGCGTGT CCGGCCTGCCCGGCGATCCGTTGTTCACCTTCATTGGGGACCAGTTGATGTGATGGAAAA GGACCAAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCCGGTCTATCAGTTGCCAAA ATAGTACTAGTGATCCTTGCCTTTTAAATTGCCTGTAGATTGATTATGATGTATGCTGAA AGCAGCAATACAATATCCTGTACATTCCCCCACCATGTCATATGTACCATTAACTGATTC AGTACATATTCTCAATTGGAATATTTTTACTGCAAAAAAAAAAAAAAAAA



consensusID : consensus_11805#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 433
fasta sequence
                              [GTCCACGTTACATTCTTGGGACATAAGCAGCTGTACTGAAGATCGGTGCTCGTGCTCTAAAACATTCGGCAAGCATTGTAAATCCCTGATCGGGACTTCGGCGAGTCATGCACCCTACANATGTTGTCNGTANGGGCAGTCAACATGATGANGCTCGTGCTATTGCTTGCAATATGCCAAAGCTCCGTCATCTTGAAATANGGTACATGCTCATTGCAACCAAAGNTGGTTGTTGANAATTGCCTCCCCATGTCATGATCTCAATTCCTAAAATCTGCCNTGGCTGCTGGAATGTTGACAATNAACNATTGGCNAGAAAACTATCCTGGGNNTGAAAAGTCNTTGGGCCCCNTGTTGAACAANTGGCTATNAAAAACACCTTCCTGGGAAGAATGTTNCCCAATGAACNCGGAATGAACCCTCCTTTTGGGGA]

[+] EMBL BE228434             [GTCCACGTTACATTCTTGGGACATAAGCAGCTGTACTGAAGATCGGTGCTCGTGCTCTAAAACATTCGGCAAGCATTGTAAATCCCTGATCGGGACTTCGGCGAGTCATGCACCCTACANATGTTGTCNGTANGGGCAGTCAACATGATGANGCTCGTGCTATTGCTTGCAATATGCCAAAGCTCCGTCATCTTGAAATANGGTACATGCTCATTGCAACCAAAGNTGGTTGTTGANAATTGCCTCCCCATGTCATGATCTCAATTCCTAAAATCTGCCNTGGCTGCTGGAATGTTGACAATNAACNATTGGCNAGAAAACTATCCTGGGNNTGAAAAGTCNTTGGGCCCCNTGTTGAACAANTGGCTATNAAAAACACCTTCCTGGGAAGAATGTTNCCCAATGAACNCGGAATGAACCCTCCTTTTGGGGA]


>consensus_11805#2 GTCCACGTTACATTCTTGGGACATAAGCAGCTGTACTGAAGATCGGTGCTCGTGCTCTAA AACATTCGGCAAGCATTGTAAATCCCTGATCGGGACTTCGGCGAGTCATGCACCCTACAN ATGTTGTCNGTANGGGCAGTCAACATGATGANGCTCGTGCTATTGCTTGCAATATGCCAA AGCTCCGTCATCTTGAAATANGGTACATGCTCATTGCAACCAAAGNTGGTTGTTGANAAT TGCCTCCCCATGTCATGATCTCAATTCCTAAAATCTGCCNTGGCTGCTGGAATGTTGACA ATNAACNATTGGCNAGAAAACTATCCTGGGNNTGAAAAGTCNTTGGGCCCCNTGTTGAAC AANTGGCTATNAAAAACACCTTCCTGGGAAGAATGTTNCCCAATGAACNCGGAATGAACC CTCCTTTTGGGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11805#0      TGCGTCTCTCCCTCCTCCCTCTGCAGCGCCGAGCCGGAGGAATCCTGACCGGAGGTCGGC 60
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      CTCGCCCTCCCCTCCTCGCGCGCGCGCCGCCGCCGCCGGGAAGGCCGGCTGGCGAGGTAG 120
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      TCGAAAAATATCGCCTCTGAAGGTCAGCACTGAGGCATGGGGGAGTGCAGTGAGCACAGG 180
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      TGTTGGGACGAGCTACTACCGGACGCACTGGGCCTCATCTTTCGCAAACTCTCACTCAAG 240
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      GATGTGCTCACCGTGGTGCCGCGGGTTTGCAAATCCTGGGGGCGGGTGGTTGCAGGGCCT 300
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      TACTGCTGGCAGGAGATCGACATCCAGGAGTGGAGCCAGCAGCAGAGCAAGCCGGACCAG 360
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      CTCAAGCGCATGGTTCGCATGCTCGTCGCCCGAAGCGGCGGCTCGTTCCACCGCATTAGC 420
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      -------------------------AGGGGAAGAAATCGAGGCCGTTTAATTATAAAATC 35
                                                                                   

consensus_11805#0      GTGTCCGGCCTGCCTGGCGATCCATTGTTCACCTTCATTGGGGACCATGCACGGTCACTT 480
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      CTTAGTAAATCACTTAAATTTTGTAAATTTAAAGGTTAATCTTGCTAGAAAATTACTTAA 95
                                                                                   

consensus_11805#0      AAAACCATGGAGCTTCCAAGGAGTGATATCAGCGACTCCTTAGTGGAAAATGTTGCGCCA 540
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      TCTTTGTNCTTGGCACAGGTAGTCGAAAAATATCGCCTCTNAAGGAGAGGACGAGACAAG 155
                                                                                   

consensus_11805#0      AGATTGTCCAACGT-TACAT-TCTTGG-ACATAAGCAGCTGTACT-AAGATCGGTGCTCG 596
consensus_11805#2      -----GTCCA-CGT-TACAT-TCTTGGGACATAAGCAGCTGTACTGAAGATCGGTGCTCG 52
consensus_11805#1      GGGGAGTGCAGTGAGCACAGGTGTTGGGAC--GAGCTACTACCGGACGCACTGGGCCTCA 213
                            ** **  *   ***  * **** **   ***  **         *  **  *** 

consensus_11805#0      TGCTCTAGAAGCATTCGG-CAAGCAT-TGTAAATCCCTGATCGG-ACTTCGGCGAGTCAT 653
consensus_11805#2      TGCTCTA-AAACATTCGG-CAAGCAT-TGTAAATCCCTGATCGGGACTTCGGCGAGTCAT 109
consensus_11805#1      TCTTTCGCAAACTCTCACTCAAGGATGTGCTCACCGCGGTGCCGCGGGTTTGCAAATCCT 273
                       *  *    ** *  **   **** ** **   * * * *  * *    *  ** * ** *

consensus_11805#0      GCACCCTA-CAGATGTTGTCGGTAGGGCCAGTCAACATGATGAGGCTCGTGC-TATTGCT 711
consensus_11805#2      GCACCCTA-CANATGTTGTCNGTANGGGCAGTCAACATGATGANGCTCGTGC-TATTGCT 167
consensus_11805#1      GGGGGCGGGTGGTTGCAGGGCCTTACTGCTGGCAGGAGATCGACATCCAGGAGTGGAGCC 333
                       *    *       **  *    *     * * **  *    **    *  *  *   ** 

consensus_11805#0      TGCAATATGCCAAAGCTCCGTCATCTTGAG-ATAGGGT--ACATGCTCATTGCAACGAAG 768
consensus_11805#2      TGCAATATGCCAAAGCTCCGTCATCTTGAA-ATANGGT--ACATGCTCATTGCAACCAAA 224
consensus_11805#1      AGCAGCAGAGCAA-GCCGGACCAGCTCAAGCGCATGGTTCGCATGCTCGTCGCCCGAAGC 392
                        ***  *   *** **     ** **  *    * ***   ******* * **    *  

consensus_11805#0      GCTG--TTGTTG----AGA-TTGCCTCTCAG---TGTCATGATCTCAAATTCTTAGATCT 818
consensus_11805#2      GNTGG-TTGTTG----ANAATTGCCTCCCCA---TGTCATGATCTCAATTCCTAAAATCT 276
consensus_11805#1      GGCGGCTCGTTCCACCGCATTAGCGTGTCCGGCCTGCCCGGCGATCCGTTGTTCACCTTC 452
                       *  *  * ***       * * ** *  *     ** *  *   **   *  * *  *  

consensus_11805#0      GC-GTGG--CTGCTGGAATGTTGACGATAAACTATTG-CAAGAGAGCTATCCTGGGCT-- 872
consensus_11805#2      GCCNTGG--CTGCTGGAATGTTGACAATNAACNATTGGCNAGAAAACTATCCTGGGNNTG 334
consensus_11805#1      ATTGGGGACCAGTTGATGTGATGGAAAAGGACCAAAGTTTGGATCCAAACTTTGGATCTA 512
                            **  * * **   ** **   *   ** *  *    **     *   ***     

consensus_11805#0      GAAAGTCGTTGGCCCCTATGT-GGACGACTG-CTATGAGAA-CAGCTTC-TGGGAGGAGT 928
consensus_11805#2      AAAAGTCNTTGGGCCCCNTGTTGAACAANTGGCTATNAAAAACACCTTCCTGGGAAGAAT 394
consensus_11805#1      AACACAGCCCGGTCTATCAGTTGCCAAAATA-GTACTAGTGATCCTTGCCTTTTAA-ATT 570
                        * *      ** *     ** *    * *   **  *        * * *   *  * *

consensus_11805#0      GTTCC--GATGA-CTCGGA-TGATTCCATCTATTGGGAGCTCATGGATGATGATTATTAT 984
consensus_11805#2      GTTNCCCAATGAACNCGGAATGAACCCTCCTTTTGGGGA--------------------- 433
consensus_11805#1      GCCTGTAGATTGATTATGA-TGTATGCTGAAAGCAGCAATACAATATCCTGTACATTCCC 629
                       *       **       ** **    *        *                        

consensus_11805#0      GCGGCGGGGAGCGATGACGAGGGCATATGGGACGATGGTCAAGGTCTTGAGGGCTTAGAA 1044
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      CCACCATGTCATATGTACCATTAACTGATTCAGTACATATTCTCAATTGGAATATTTTTA 689
                                                                                   

consensus_11805#0      GTAAGGTTTTATGGTGGTGGATTTAGTGAAAGCCATGCTGGTTTTGATTGGCCGCCATCT 1104
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      CTGCAAAAAAAAAAAAAAAAA--------------------------------------- 710
                                                                                   

consensus_11805#0      CCATGAAAGCTGCATCAAGATCTTCAGAAAAGTGCCTGTGTATTCCTGCTGCTTCCTCTT 1164
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      ATGTGCTTCAAGTTTTAAACATCAGCTTCCTTAGTACTAGTATGTGCTTGTATTTGTGTC 1224
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      ATCCCCTAGCTTGCAGATATTTGAAGCCAACTATCTGGTAGTATAAAATGTTTGGTGTTT 1284
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      ATACATAAAAAATAGCAACATGGTCTGGTAGTACTGAAACAATGTTGCTACAAATTTGTT 1344
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      TCAGTACTAGTAATTTATTTCAGAGGTTTTCCATGCGCCTGTAATCCTGTACTAGTTCTC 1404
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      TTTTATACTGCGGTTCTATGACTTCTACTACTACTATCTCCCTTTCTATTGGACAAGATG 1464
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      TGGCCTGGTATGCCAGGGACTACAGTATTGAAGGTGTAGTACTGCATGTCATAGCAATTC 1524
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      CAAGAAGTAACAGTGAGATGCCCACCCTGCATTTAGACCAGACAATGGTGGCCACTGGTG 1584
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      CCCAGATCCTAGATTTTGTCCTAAAATCTTGTGATGAAGCAGTGTTTTTTTCTTTTGTCA 1644
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      GATGGATTGGAATCAGTTACATGGCGTGTCAGTTGTCTCTTGCAAGGCAAGCTACACCTG 1704
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      ACATTTGCCATGCATCACTGCTTCCACGGCGTTCTCTTTCTGACTCTGCAACTTTGGCAA 1764
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      TGCACGCACCACTGCTGGGCATTCCAATGGGAGCAGCTATCGATATGTACGTTTGGTGTT 1824
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      TTATCAGGTCTGGTCTGAATAGTGAATGCCCAATGGACAATCCCACATTATTCTGTGGCT 1884
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      TTTCCTTTGTTTGAGGTGGGATCCTGTGCTAATAATGAATTTTAAATCGTTGGATTAAAA 1944
consensus_11805#2      ------------------------------------------------------------
consensus_11805#1      ------------------------------------------------------------
                                                                                   

consensus_11805#0      AAA 1947
consensus_11805#2      ---
consensus_11805#1      ---
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)