cluster # 11808

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Oryza sativa
cluster # 11808 cluster # 11808 Sequences # 9 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11808#0 length = 3362 sequences # 3
consensus_11808#1 length = 1250 sequences # 3

consensus_11808#2 length = 564 sequences # 1
consensus_11808#3 length = 482 sequences # 1
consensus_11808#4 length = 115 sequences # 1

consensusID : consensus_11808#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3362
fasta sequence

                              [TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGGTACAATTCCTAACTGTCATGTTATATCACAACAGTTATACTTGACATGCCCTTCTGTTCTTTATAACAACTCCTTTTTGTACATACACAACTACTTTATGCTGCTGCACATACTTGGAAGTGAATAGTGAACAACATAGCTTATATTAGCAGCCACAGCGACTAGAGCTGATGATGTTTCTTAGGAGTTAGCTTATGTAATTATGCTTAATCAGCAAGCTTGAAAACTGAGCATTTTGTCCTTTTTTTCCCTTGATCCTGTGACAGAGAAACCCAGTGGGTACTGGAAGCTAAATGCCTAAAATTTGCTGATCCTGGTGTACAGTTTAACTGTGCTCATATGGATAGTTAATACTCTATAATACTTTAGTCTTCTAGAAGTGGAACATACTGTAAGAGACAGCTATCGTATGCATAACTTTTTTTTTGTATCATAGCTGAATACACCTTGGTATCATGAATAGACTTCAAAAAAAGTGAAAGACTTGAAAAGGACTATGTTAATACTTTAGTTTATTATTTAGTTAAGCTGCAGGATATTCAGAGGTATGAGTATGGACCCAGTATAAGTTAAATGTGTGTGCATATTAATGGCCAAAGTAAGATCGAATTTGACTGATACTAGATCTGGAATCAAATATGTTAATGGCCAAAGAACCTGAAAGGTACAGACGGAAATCCATTCCATACTGTTTTTGCAGCTAAATCTGCTTGCTCGTCCTCCTCCTCCGATCTTGTCTATTACATTAATGCACACAAGAGAGCGTCTAAACATTAGGACATTTAAATTTCATTATATGTGCCAATCACGGAATCACCTGCCATGGAAGTGACTAAATATTTTTTTTTCCTGTTAATAATATTTGTATGTCCTGGAATATCAATGGGATCAGTTCTGTTTGGAAGCATGATCTCTATATGACTTTATAAGGTGATGAAATGAAATGTTGTTTGCTTTGAATGAAGAAACATTATTAACTTGTGTAGAATAGTTAGCTTGAAACGTTATGAGATTTGTGGTCTATTTTGTCTCCTTGAAAACCGTATGTATAAGTGGTACTTCTGTTCTAGATGCCCTGGTACTTCAAAATAATAGGAATAAAAACAACAATTTAATTATCTTTTCTTTGTTATGAGCCTTGATTCCAGATTTCAGGACTTGGGAGCATTGCCGTGGCAAACTAGTACTAAGTATGCCCAGAGTTTAACGAATCTTAGTTTGTACTCATTGTCCCATACAATTCATGCAACTGATAACAAATATGCTTGTTGAAATCTGTCGAATATACAGCTGGCTCTTTTCATGTGTCAGGTTCTAATTGTATTATTGGAGCCAACTTCATAGCATTACTGCAATATTGTTTGCCAATAGTTTCAATTCCACTCCAAATGAACTATGTTACCTACTCTCTCTGTCCACAAATATAAGGGGATTTTAGCTATGCACCTGGGAGCACTTGTCCATGTATATAGTCAAAATACCTTATATGTGGACGGAGGGCCTGATCCTTGGTGAATTATGATACTGTTCTAATTCAAGAGTTAGTTTATGAACATGATAATTTGTTCAGTTATTTAAACTTGTAACTCATGTTCTCACAGATCTGGACAAATTCTCTTCTTTATGACTCATTTCCTTTACTTTTGACATTTCAGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATATAACTTCCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTATGTGTACATGTATATATATGTGCTTAGAAGTTAGAAGTTGATCCCTTTCTGGACTGCTTACATGGCAGTCTT]

[+] EMBL AK072098             [TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGGTACAATTCCTAACTGTCATGTTATATCACAACAGTTATACTTGACATGCCCTTCTGTTCTTTATAACAACTCCTTTTTGTACATACACAACTACTTTATGCTGCTGCACATACTTGGAAGTGAATAGTGAACAACATAGCTTATATTAGCAGCCACAGCGACTAGAGCTGATGATGTTTCTTAGGAGTTAGCTTATGTAATTATGCTTAATCAGCAAGCTTGAAAACTGAGCATTTTGTCCTTTTTTTCCCTTGATCCTGTGACAGAGAAACCCAGTGGGTACTGGAAGCTAAATGCCTAAAATTTGCTGATCCTGGTGTACAGTTTAACTGTGCTCATATGGATAGTTAATACTCTATAATACTTTAGTCTTCTAGAAGTGGAACATACTGTAAGAGACAGCTATCGTATGCATAACTTTTTTTTTGTATCATAGCTGAATACACCTTGGTATCATGAATAGACTTCAAAAAAAGTGAAAGACTTGAAAAGGACTATGTTAATACTTTAGTTTATTATTTAGTTAAGCTGCAGGATATTCAGAGGTATGAGTATGGACCCAGTATAAGTTAAATGTGTGTGCATATTAATGGCCAAAGTAAGATCGAATTTGACTGATACTAGATCTGGAATCAAATATGTTAATGGCCAAAGAACCTGAAAGGTACAGACGGAAATCCATTCCATACTGTTTTTGCAGCTAAATCTGCTTGCTCGTCCTCCTCCTCCGATCTTGTCTATTACATTAATGCACACAAGAGAGCGTCTAAACATTAGGACATTTAAATTTCATTATATGTGCCAATCACGGAATCACCTGCCATGGAAGTGACTAAATATTTTTTTTTCCTGTTAATAATATTTGTATGTCCTGGAATATCAATGGGATCAGTTCTGTTTGGAAGCATGATCTCTATATGACTTTATAAGGTGATGAAATGAAATGTTGTTTGCTTTGAATGAAGAAACATTATTAACTTGTGTAGAATAGTTAGCTTGAAACGTTATGAGATTTGTGGTCTATTTTGTCTCCTTGAAAACCGTATGTATAAGTGGTACTTCTGTTCTAGATGCCCTGGTACTTCAAAATAATAGGAATAAAAACAACAATTTAATTATCTTTTCTTTGTTATGAGCCTTGATTCCAGATTTCAGGACTTGGGAGCATTGCCGTGGCAAACTAGTACTAAGTATGCCCAGAGTTTAACGAATCTTAGTTTGTACTCATTGTCCCATACAATTCATGCAACTGATAACAAATATGCTTGTTGAAATCTGTCGAATATACAGCTGGCTCTTTTCATGTGTCAGGTTCTAATTGTATTATTGGAGCCAACTTCATAGCATTACTGCAATATTGTTTGCCAATAGTTTCAATTCCACTCCAAATGAACTATGTTACCTACTCTCTCTGTCCACAAATATAAGGGGATTTTAGCTATGCACCTGGGAGCACTTGTCCATGTATATAGTCAAAATACCTTATATGTGGACGGAGGGCCTGATCCTTGGTGAATTATGATACTGTTCTAATTCAAGAGTTAGTTTATGAACATGATAATTTGTTCAGTTATTTAAACTTGTAACTCATGTTCTCACAGATCTGGACAAATTCTCTTCTTTATGACTCATTTCCTTTACTTTTGACATTTCAGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATATAACTTCCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTATGTGTACATGTATATATATGTGCTTAGAAGTTAGAAGTTGATCCCTTTCTGGACTGCTTACATGGCAGTCTT]
[+] EMBL AK070190             [TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGGTACAATTCCTAACTGTCATGTTATATCACAACAGTTATACTTGACATGCCCTTCTGTTCTTTATAACAACTCCTTTTTGTACATACACAACTACTTTATGCTGCTGCACATACTTGGAAGTGAATAGTGAACAACATAGCTTATATTAGCAGCCACAGCGACTAGAGCTGATGATGTTTCTTAGGAGTTAGCTTATGTAATTATGCTTAATCAGCAAGCTTGAAAACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB625630             [TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_11808#0
TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACT
TTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAG
TATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCA
ATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTG
CACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGC
ATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGAT
TGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGA
AAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTC
TTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAG
TGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCAT
TGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCAT
CTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAG
ACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCT
GTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGA
CAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTAT
TCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATC
TTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAA
ATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATG
GCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAA
GTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTC
ATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGG
TACAATTCCTAACTGTCATGTTATATCACAACAGTTATACTTGACATGCCCTTCTGTTCT
TTATAACAACTCCTTTTTGTACATACACAACTACTTTATGCTGCTGCACATACTTGGAAG
TGAATAGTGAACAACATAGCTTATATTAGCAGCCACAGCGACTAGAGCTGATGATGTTTC
TTAGGAGTTAGCTTATGTAATTATGCTTAATCAGCAAGCTTGAAAACTGAGCATTTTGTC
CTTTTTTTCCCTTGATCCTGTGACAGAGAAACCCAGTGGGTACTGGAAGCTAAATGCCTA
AAATTTGCTGATCCTGGTGTACAGTTTAACTGTGCTCATATGGATAGTTAATACTCTATA
ATACTTTAGTCTTCTAGAAGTGGAACATACTGTAAGAGACAGCTATCGTATGCATAACTT
TTTTTTTGTATCATAGCTGAATACACCTTGGTATCATGAATAGACTTCAAAAAAAGTGAA
AGACTTGAAAAGGACTATGTTAATACTTTAGTTTATTATTTAGTTAAGCTGCAGGATATT
CAGAGGTATGAGTATGGACCCAGTATAAGTTAAATGTGTGTGCATATTAATGGCCAAAGT
AAGATCGAATTTGACTGATACTAGATCTGGAATCAAATATGTTAATGGCCAAAGAACCTG
AAAGGTACAGACGGAAATCCATTCCATACTGTTTTTGCAGCTAAATCTGCTTGCTCGTCC
TCCTCCTCCGATCTTGTCTATTACATTAATGCACACAAGAGAGCGTCTAAACATTAGGAC
ATTTAAATTTCATTATATGTGCCAATCACGGAATCACCTGCCATGGAAGTGACTAAATAT
TTTTTTTTCCTGTTAATAATATTTGTATGTCCTGGAATATCAATGGGATCAGTTCTGTTT
GGAAGCATGATCTCTATATGACTTTATAAGGTGATGAAATGAAATGTTGTTTGCTTTGAA
TGAAGAAACATTATTAACTTGTGTAGAATAGTTAGCTTGAAACGTTATGAGATTTGTGGT
CTATTTTGTCTCCTTGAAAACCGTATGTATAAGTGGTACTTCTGTTCTAGATGCCCTGGT
ACTTCAAAATAATAGGAATAAAAACAACAATTTAATTATCTTTTCTTTGTTATGAGCCTT
GATTCCAGATTTCAGGACTTGGGAGCATTGCCGTGGCAAACTAGTACTAAGTATGCCCAG
AGTTTAACGAATCTTAGTTTGTACTCATTGTCCCATACAATTCATGCAACTGATAACAAA
TATGCTTGTTGAAATCTGTCGAATATACAGCTGGCTCTTTTCATGTGTCAGGTTCTAATT
GTATTATTGGAGCCAACTTCATAGCATTACTGCAATATTGTTTGCCAATAGTTTCAATTC
CACTCCAAATGAACTATGTTACCTACTCTCTCTGTCCACAAATATAAGGGGATTTTAGCT
ATGCACCTGGGAGCACTTGTCCATGTATATAGTCAAAATACCTTATATGTGGACGGAGGG
CCTGATCCTTGGTGAATTATGATACTGTTCTAATTCAAGAGTTAGTTTATGAACATGATA
ATTTGTTCAGTTATTTAAACTTGTAACTCATGTTCTCACAGATCTGGACAAATTCTCTTC
TTTATGACTCATTTCCTTTACTTTTGACATTTCAGTAAGGCATCGTTTGCTCCGAGTTAG
CTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAG
TCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTG
AAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGG
TTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGT
AATAATCTGCCAGCTTTACCAATATAACTTCCTTATGGTTACCCTGTTAAATGAATACGC
AAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTATGTGTACATG
TATATATATGTGCTTAGAAGTTAGAAGTTGATCCCTTTCTGGACTGCTTACATGGCAGTC
TT

consensusID : consensus_11808#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1250
fasta sequence

                              [TGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAAGGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATAAAAAGACCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTAGGTGTACATGTATATATATGTGCTTAGAAGTTA]

[+] EMBL AK059035             [TGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAG                                                                                                                                                                                                                   ]
[-] EMBL CB625631             [                                                                                                                                                                                                                                                                                                                 GTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAAGGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATAAAAAGA                                                                                                                 ]
[-] EMBL CB659706             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATATAACTTCCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTAGGTGTACATGTATATATATGTGCTTAGAAGTTA]




>consensus_11808#1
TGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAAC
GTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATT
TAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTG
CATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTC
CATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGA
AAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGG
GCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCA
GGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATG
TATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAA
ATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGA
AAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGAC
ATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTT
GAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATT
TTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTAC
TGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTG
CCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAA
CTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGAC
GAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATG
CCAAAAAAGTCAAGGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATAAAAAGACCT
TATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAA
ATGCCCCTCAAATTGTAGGTGTACATGTATATATATGTGCTTAGAAGTTA

consensusID : consensus_11808#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 564
fasta sequence

                              [CAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAAAAAAAAAAAAAAC]

[-] EMBL CF323204             [CAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAAAAAAAAAAAAAAC]




>consensus_11808#2
CAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAA
TTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAAT
GACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTC
AGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGC
GATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCG
AGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTT
TGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTG
CTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGG
TGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACT
GTATGTAATAAAAAAAAAAAAAAC

consensusID : consensus_11808#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 482
fasta sequence

                              [GGGGCACATGTGTTACCCTTTACAGGTATCAGGACAGACTGCAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGAATGTATTTCTGGGAGAACGCTACAGCATTGAAGGGGTGTNNNTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCCAGCAAAGTATTGACCCTACCTAGGTGGTATTGGAAGCAAATGGAAAGAAAAAATCTCTCCCCTTGGATTGGAAATTACGGGAGGCTGGTGTGGCAAAATCGGCCATCATTTATAGACATGGCTGACTGTAGAGATAATGACGATACCATGATNTTTACTTGGTTAAGTAGCTACTTTTTTGAGGTGCAAGACGGTGCCTCCAGGACAGAATNTGAAGCTATGGTGGCATCTCTCTAAATGTTCATNTCCCCAGAAATGAAGCGATAACCATCAGATCATGGAGACATCTNNGCTGGCGTAC]

[+] EMBL CA753376             [GGGGCACATGTGTTACCCTTTACAGGTATCAGGACAGACTGCAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGAATGTATTTCTGGGAGAACGCTACAGCATTGAAGGGGTGTNNNTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCCAGCAAAGTATTGACCCTACCTAGGTGGTATTGGAAGCAAATGGAAAGAAAAAATCTCTCCCCTTGGATTGGAAATTACGGGAGGCTGGTGTGGCAAAATCGGCCATCATTTATAGACATGGCTGACTGTAGAGATAATGACGATACCATGATNTTTACTTGGTTAAGTAGCTACTTTTTTGAGGTGCAAGACGGTGCCTCCAGGACAGAATNTGAAGCTATGGTGGCATCTCTCTAAATGTTCATNTCCCCAGAAATGAAGCGATAACCATCAGATCATGGAGACATCTNNGCTGGCGTAC]




>consensus_11808#3
GGGGCACATGTGTTACCCTTTACAGGTATCAGGACAGACTGCAGCTCAACGAGCCAATTC
AGAATCTGCATATAGAGGTATGTCTGAATGTATTTCTGGGAGAACGCTACAGCATTGAAG
GGGTGTNNNTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGC
CAGCAAAGTATTGACCCTACCTAGGTGGTATTGGAAGCAAATGGAAAGAAAAAATCTCTC
CCCTTGGATTGGAAATTACGGGAGGCTGGTGTGGCAAAATCGGCCATCATTTATAGACAT
GGCTGACTGTAGAGATAATGACGATACCATGATNTTTACTTGGTTAAGTAGCTACTTTTT
TGAGGTGCAAGACGGTGCCTCCAGGACAGAATNTGAAGCTATGGTGGCATCTCTCTAAAT
GTTCATNTCCCCAGAAATGAAGCGATAACCATCAGATCATGGAGACATCTNNGCTGGCGT
AC

consensusID : consensus_11808#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 115
fasta sequence

                              [GGTTTTTTTTTTTTTTTTTTTTTTAATTAAACAGGGTAACCATAAGGAAGTTATATTGGTAAAGCTGGCAAATTATTACATACAGTATGTATTGACTTTTTTGGCATGTACCCAA]

[+] EMBL CF324970             [GGTTTTTTTTTTTTTTTTTTTTTTAATTAAACAGGGTAACCATAAGGAAGTTATATTGGTAAAGCTGGCAAATTATTACATACAGTATGTATTGACTTTTTTGGCATGTACCCAA]




>consensus_11808#4
GGTTTTTTTTTTTTTTTTTTTTTTAATTAAACAGGGTAACCATAAGGAAGTTATATTGGT
AAAGCTGGCAAATTATTACATACAGTATGTATTGACTTTTTTGGCATGTACCCAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11808#0      TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACT 60
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAG 120
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCA 180
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTG 240
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGC 300
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGAT 360
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGA 420
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ---------------------------------------------------------TGA 3
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTC 480
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      AAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTC 63
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAG 540
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      TTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAG 123
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCAT 600
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      TGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCAT 183
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCAT 660
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      TGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCAT 243
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAG 720
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      CTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAG 303
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCT 780
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCT 363
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGA 840
consensus_11808#3      -----------------------GGGGCA-CATGTGTT-ACCCTTTACAGGT-ATCAGGA 34
consensus_11808#1      GTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGA 423
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGA-TGTA 899
consensus_11808#3      CA-GACTGCA-GCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGAATGTA 92
consensus_11808#1      CAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGA---TG 480
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTCT--GGAGAACGCTACAGCAT-GAGGG-----TGTTTCTGGATTCTACAAAGGAATCC 951
consensus_11808#3      TTTCTGGGAGAACGCTACAGCATTGAAGGGGTGTNNNTTCTGGATTCTACAAAGGAATCC 152
consensus_11808#1      TATTCTGGAGAACGCTACAGCATGAGGGT------GTTTCTGGATTCTACAAAGGAATCC 534
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TACCAAATCTTCTTAAAGTGGTGCCTGC-AGCAA-GTATTA--CCTACCTAG----TGTA 1003
consensus_11808#3      TACCAAATCTTCTTAAAGTGGTGCCTGCCAGCAAAGTATTGACCCTACCTAGGTGGTATT 212
consensus_11808#1      TACCAAATCTTCTTAAAGTGGTGCCTGC-AGCAA-GTATTA--CCTACCTAG----TGTA 586
consensus_11808#2      ---------------------------C-AGCAA-GTATTA--CCTACCTAG----TGTA 25
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGAAGCAAT----GAAGAAAAATCTCTCCCTT--GATTG--AATTACGGA--GCTGTT-T 1052
consensus_11808#3      GGAAGCAAATGGAAAGAAAAAATCTCTCCCCTTGGATTGGAAATTACGGGAGGCTGGTGT 272
consensus_11808#1      TGAAGCAAT----GAAGAAAAATCTCTCCCTT--GATTG--AATTACGGA--GCTGTT-T 635
consensus_11808#2      TGAAGCAAT----GAAGAAAAATCTCTCCCTT--GATTG--AATTACGGA--GCTGTT-T 74
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GGCAAA-TCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATAC-ATGA 1110
consensus_11808#3      GGCAAAATCGGCCATCATTTATAGACATGGCTGACTGTAGAGATAATGACGATACCATGA 332
consensus_11808#1      GGCAAA-TCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATAC-ATGA 693
consensus_11808#2      GGCAAA-TCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATAC-ATGA 132
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTTTA--CTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAAT 1168
consensus_11808#3      TNTTTACTTGGTTAAGTAGCTACTTTTTTGAGGTGCAAGACGGTGCCTCCAGGACAGAAT 392
consensus_11808#1      TTTTA--CTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAAT 751
consensus_11808#2      TTTTA--CTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAAT 190
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCC-AGAAATGAAGCGATAACCAT 1227
consensus_11808#3      NTGAAGCTATGGTGGCATCTCTCTAAATGTTCATNTCCCCAGAAATGAAGCGATAACCAT 452
consensus_11808#1      TTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCC-AGAAATGAAGCGATAACCAT 810
consensus_11808#2      TTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCC-AGAAATGAAGCGATAACCAT 249
consensus_11808#4      ---------------GGTTTTTTTTTTTTTTTTTTTTTTAATTAA--ACAGGGTAACCAT 43
                                        * * * *   * **  * *    *  **  *   * *******

consensus_11808#0      CAGATCATTGAGACATCTTTGCTGGCGTACTGGTACAATTCCTAACTGTCATGTTATATC 1287
consensus_11808#3      CAGATCATGGAGACATCTNNGCTGGCGTAC------------------------------ 482
consensus_11808#1      CAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTG 870
consensus_11808#2      CAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTG 309
consensus_11808#4      AAGGAAGTTATATTGGTAAAGCTGGCAAATTATTACATACAGTATGTATTGACTTTTTTG 103
                        **    *            ******  *                               

consensus_11808#0      ACAACAGTTATACTTGACATGCCCTTCTGTTCTTTATAACAACTCCTTTTTGTACATACA 1347
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      GTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCA 930
consensus_11808#2      GTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCA 369
consensus_11808#4      GCATGTACCCAA------------------------------------------------ 115
                                                                                   

consensus_11808#0      CAACTACTTTATGCTGCTGCACATACTTGGAAGTGAATAGTGAACAACATAGCTTATATT 1407
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      -AACTGTAAAACACAGGAAAACACTCTTTAACTTAATT------TACCATTCCTTGT--- 980
consensus_11808#2      -AACTGTAAAACACAGGAAAACACTCTTTAACTTAATT------TACCATTCCTTGT--- 419
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AGCAGCCACAGCGACTAGAGCTGATGATGTTTCTTAGGAGTTAGCTTATGTAATTATGCT 1467
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ----GCTCCTGAAATTAAAGAGGAGCTTGACCTTTA-----CTGACGACGAAATTGCCCT 1031
consensus_11808#2      ----GCTCCTGAAATTAAAGAGGAGCTTGACCTTTA-----CTGACGACGAAATTGCCCT 470
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TAATCAGCAAGCTTGAAAACTGAGCATTTTGTCCTTTTTTTCCCTTGATCCTGTGACAGA 1527
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ---GCAGAAAGGGTGCTGGTTATACA---TGCCTGTATTGCCCCTTGGCTACATGCCAAA 1085
consensus_11808#2      ---GCAGAAAGGGTGCTGGTTATACA---TGCCTGTATTGCCCCTTGGCTACATGCCAAA 524
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GAAACCCAGTGGGTACTGGAAGCTAAATGCCTAAAATTTGCTGATCCTGGTGTACAGTTT 1587
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      -AAAGTCAAGGCCTACTGTATGTAA------TAATCTGCCAGCTTTACCAATAAAAAGAC 1138
consensus_11808#2      -AAAGTCAATGCCTACTGTATGTAA------TAAAA-------------AAAAAAAAAAC 564
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AACTGTGCTCATATGGATAGTTAATACTCTATAATACTTTAGTCTTCTAGAAGTGGAACA 1647
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      CTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTA 1198
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TACTGTAAGAGACAGCTATCGTATGCATAACTTTTTTTTTGTATCATAGCTGAATACACC 1707
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      AAATGCCCCTCAAATTGTAGGTGTACATGTATATATATGTGCTTAGAAGTTA-------- 1250
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGGTATCATGAATAGACTTCAAAAAAAGTGAAAGACTTGAAAAGGACTATGTTAATACT 1767
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTAGTTTATTATTTAGTTAAGCTGCAGGATATTCAGAGGTATGAGTATGGACCCAGTATA 1827
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AGTTAAATGTGTGTGCATATTAATGGCCAAAGTAAGATCGAATTTGACTGATACTAGATC 1887
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGGAATCAAATATGTTAATGGCCAAAGAACCTGAAAGGTACAGACGGAAATCCATTCCAT 1947
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ACTGTTTTTGCAGCTAAATCTGCTTGCTCGTCCTCCTCCTCCGATCTTGTCTATTACATT 2007
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AATGCACACAAGAGAGCGTCTAAACATTAGGACATTTAAATTTCATTATATGTGCCAATC 2067
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ACGGAATCACCTGCCATGGAAGTGACTAAATATTTTTTTTTCCTGTTAATAATATTTGTA 2127
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGTCCTGGAATATCAATGGGATCAGTTCTGTTTGGAAGCATGATCTCTATATGACTTTAT 2187
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AAGGTGATGAAATGAAATGTTGTTTGCTTTGAATGAAGAAACATTATTAACTTGTGTAGA 2247
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ATAGTTAGCTTGAAACGTTATGAGATTTGTGGTCTATTTTGTCTCCTTGAAAACCGTATG 2307
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TATAAGTGGTACTTCTGTTCTAGATGCCCTGGTACTTCAAAATAATAGGAATAAAAACAA 2367
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CAATTTAATTATCTTTTCTTTGTTATGAGCCTTGATTCCAGATTTCAGGACTTGGGAGCA 2427
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGCCGTGGCAAACTAGTACTAAGTATGCCCAGAGTTTAACGAATCTTAGTTTGTACTCA 2487
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGTCCCATACAATTCATGCAACTGATAACAAATATGCTTGTTGAAATCTGTCGAATATA 2547
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CAGCTGGCTCTTTTCATGTGTCAGGTTCTAATTGTATTATTGGAGCCAACTTCATAGCAT 2607
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TACTGCAATATTGTTTGCCAATAGTTTCAATTCCACTCCAAATGAACTATGTTACCTACT 2667
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CTCTCTGTCCACAAATATAAGGGGATTTTAGCTATGCACCTGGGAGCACTTGTCCATGTA 2727
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TATAGTCAAAATACCTTATATGTGGACGGAGGGCCTGATCCTTGGTGAATTATGATACTG 2787
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTCTAATTCAAGAGTTAGTTTATGAACATGATAATTTGTTCAGTTATTTAAACTTGTAAC 2847
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TCATGTTCTCACAGATCTGGACAAATTCTCTTCTTTATGACTCATTTCCTTTACTTTTGA 2907
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CATTTCAGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTT 2967
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACT 3027
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACT 3087
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGC 3147
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATATAA 3207
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CTTCCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGAC 3267
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GGTAAAATGCCCCTCAAATTGTATGTGTACATGTATATATATGTGCTTAGAAGTTAGAAG 3327
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGATCCCTTTCTGGACTGCTTACATGGCAGTCTT 3362
consensus_11808#3      -----------------------------------
consensus_11808#1      -----------------------------------
consensus_11808#2      -----------------------------------
consensus_11808#4      -----------------------------------