These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11809#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2024 fasta sequence [CTATATGGGTGTTGCTGAATCAGTCTTAAACTCAAAATAAGCTCTATATGGGGATTTTGTTGCTGAACAGTCATAAGGCATGATGGATAAACAATTTTTTCCTGCTTAGCAGCTTGTGGTACGGCTATCTCATAAGTCCTATCTT-AGCTAGAGAGTTCCTCATTTAGCTGTTGCGTAGATTCTGCTGGTTGATTTTAATTAGCTGTGCTTTGCAAGATACATGCGTATCAGCAGGTTTGAGCTGATCAGCTGAAACAAAAGGCATGTTTCTTTATGCTCCAATTTGCTCCAGGATATCAACGGCACTAATATTTTTGCACGACATAATTCTCTCGTAAAGTT----AAAGAGTTACATAGGATTTTGGTTAGGACTGGCTTTGTTTTGAC-TAGATGACAATGAGTTTACTGTTCTGATTTCTAAACCATGATGAGTAGAAATTTTTTTCCCACTGAAGTGCTTGCTATATCTTTACTGCAATGTGTGTTTGCATAACAGATGAGTNTAATTATGGTTGTGAAACCTTATTGATTGTGCTCCATTGAGCTTCATCATGATGTGCTACGCGTGTTGCTGAATAAGTCGAAAAGTCGAAAGGAGCTGGGTTAGTGGGTTCTGTTAATAAGACATGATGTGCAGTCATTTTTTGCTGCTTAGCATCGTGTGGTAAATGATATCTTAACTAGAGAGCTTCACATTTCGCTGTTGCGTAGATTCTGGATAATTTAAGAATTCTGTAAAATAAATCGTGGTATCCATAGGTTGTGAAGAAACTTTAATTAGCTATGCTTTGCAAGATACATGAAAAATATCAGTAGGTTCTTCACTGGAATTGGAACCAAGTTCATTGCAACTGCGAGTGATTTGATCTGTGTAGCTATCAAATGTTTCTTAAGCATTATTTCTCTTTGTTGGTGACTTTGTTTACATGAACTATGCGTTTTTCCACATGTTAAATTCTGAATTAAGTTTCCATTTCCCTTTTCTC-AAAAAGAAAAAAACGGTTTCCATTTCCCTAAGGAACTCCTGTGAATCAATTCTGTTCTTGGAACACGGGAGATTTCTCAAACTTTTAATGAACATGTCGCAATGTTACAATTTCATCCAGTCCAGAAGATGGTTAGCTACTTTCTTCCCATTAGTTCTCAGCAGTAAGGATTAAGGAACAGTTATTAGATTGGACATCATTTTGATGATTGCAGAATTAACATCTTAAATTGTTGCATGACTGCAGGTCTGCAACCCTTTCTGCAGGTGAGAGAAAGCCTGAACCATCACCACTCAACATCTGAAACTTTGCCTCCTGGAAGTTCAGGTTCTCTGCCTCTCAGGGATCATCAGCATCATGAGCAGCAGCAGCAGCAGATCAGGAGCATTAATCAGCACAATGCCACAGCTCCTTCAGCCACCGGTGGCATCACCATGTACAGGCCGGCCGACGAGTCCAGCTCCGGCGACGGCGAGGCGCGGAGGTCATCGCCGGCGGCGAACAGGAGCTGCTCCTTGAGCTTGTCCAGCGCTTCTCGCATCCAGTCGTACCTGCAGAGGCCGTACGCCTCCTCAACCGGCACCTGAAATTCTTGCAACAAGAACATCATGTGAGCTTCTTGCTGCCATCATCTCATCAGGTGGTGATCTCTGAACATGATGAACTGAAACTGAAACTGGAAACTGTAGAATGGGATGTATGCTCACCCATCTCCTGCCATGGGTGGTCTGCTCAGGCCATGACTCCAGCAACTCTGTCACCTGGAGAGCAAACATGTAGCCCTTGCAGGCCCCTTGCAGGCCACAGCTGTTCTGCTTGCTCTTGCTCTTGAAGATCCAATTCTCCCAGTGGTGTCCCCTGAATTAATTTCAGCACAACTTTGTCAGCTGATTGGTTACTCTGTTCTATGCTACTCCTGAATCTTTTACATATCTGAATGATGTGCTTGAAACTTTGACATGTAAAAAAAGTTCAGGAAAAGCTCATTGCAATTTCTGTCTCTGACACTGTTGGAAAGCTCATATTTTCAACACATGGA] [+] EMBL CF306260 [CTATATGGGTGTTGCTGAATCAGTCTTAAACTCAAAATAAGCTCTATATGGGGATTTTGTTGCTGAACAGTCATAAGGCATGATGGATAAACAATTTTTTCCTGCTTAGCAGCTTGTGGTACGGCTATCTCATAAGTCCTATCTT AGCTAGAGAGTTCCTCATTTAGCTGTTGCGTAGATTCTGCTGGTTGATTTTAATTAGCTGTGCTTTGCAAGATACATGCGTATCAGCAGGTTTGAGCTGATCAGCTGAAACAAAAGGCATGTTTCTTTATGCTCCAATTTGCTCCAGGATATCAACGGCACTAATATTTTTGCACGACATAATTCTCTCGTAAAGTT AAAGAGTTACATAGGATTTTGGTTAGGACTGGCTTTGTTTTGAC TAGATGACAATGAGTTTACTGTTCTGATTTCTAAACCATGATGAGTAGAAATTTTTTTCCCACTGAAGTGCTTGCTATATCTTTACTGCAATGTGTGTTTGCATAACAGATGAGTNTAATTATGGTTGTGAAACCTTATTGATTGTGCTCCATTGAGCTTCATCATGATGTGCTACGCGTGTTGCTGAATAAGTCGAAAAGTCGAAAGG ] [+] EMBL AK058678 [ TTAAACTCAAAATAAGCTCTATATGGGGATTTTGTTGCTGAACAGTCATAAGGCATGATGGATAAACAATTTTTTCCTGCTTAGCAACTTGTGGTACGGCTATCTCATAAGTCCTATCTTAAGCTAGAGAGTTCCTCATTTAGCTGTTGCGTAGATTCTGCTGGTTGATTTTAATTAGCTGTGCTTTGCAAGATACATGCGTATCAGCAGGTTTGAGCTGATCAGCTGAAACAAAAGGCCAGTTTCTTTATGCTCCAATTTGCTCCAGGATATCAACGGCACTAATATTTTTGCACGACATAATTCTCTCGTAAAGTTAAAGAAAGAGTTACATAGGATTTTGATTAGAACTGGCTTTGTTTTGACTTAGATGACAATGAGTTTACTGTTCTGATTTCTAAACCATGATGAGTAGAAATTTTTTTCCCACTGAAGTGCTTGCTATATCTTTACTGCAATGTGTGTTTGCATAACAGATGAGT TAATTATGGTTGTGAAACCTTATTGATTGTGCTCCATTGAGCTTCATCATGATGTGCTACGCGTGTTGCTGAATAAGTCGAAAAGTCGAAAGGAGCTGGGTTAGTGGGTTCTGTTAATAAGACATGATGTGCAGTCATTTTTTGCTGCTTAGCATCGTGTGGTAAATGATATCTTAACTAGAGAGCTTCACATTTCGCTGTTGCGTAGATTCTGGATAATTTAAGAATTCTGTAAAATAAATCGTGGTATCCATAGGTTGTGAAGAAACTTTAATTAGCTATGCTTTGCAAGATACATGAAAAATATCAGTAGGTTCTTCACTGGAATTGGAACCAAGTTCATTGCAACTGCGAGTGATTTGATCTGTGTAGCTATCAAATGTTTCTTAAGCATTATTTCTCTTTGTTGGTGACTTTGTTTACATGAACTATGCGTTTTTCCACATGTTAAATTCTGAATTAAGTTTCCATTTCCCTTTTCTC AAAAAGAAAAAAACGGTTTCCATTTCCCTAAGGAACTCCTGTGAATCAATTCTGTTCTTGGAACACGGGAGATTTCTCAAACTTTTAATGAACATGTCGCAATGTTACAATTTCATCCAGTCCAGAAGATGGTTAGCTACTTTCTTCCCATTAGTTCTCAGCAGTAAGGATTAAGGAACAGTTATTAGATTGGACATCATTTTGATGATTGCAGAATTAACATCTTAAATTGTTGCATGACTGCAGGTCTGCAACCCTTTCTGCAGGTGAGAGAAAGCCTGAACCATCACCACTCAACATCTGAAACTTTGCCTCCTGGAAGTTCAGGTTCTCTGCCTCTCAGGGATCATCAGCATCATGAGCAGCAGCAGCAGCAGATCAGGAGCATTAATCAGCACAATGCCACAGCTCCTTCAGCCACCGGTGGCATCACCATGTACAGGCCGGCCGACGAGTCCAGCTCCGGCGACGGCGAGGCGCGGAGGTCATCGCCGGCGGCGAACAGGAGCTGCTCCTTGAGCTTGTCCAGCGCTTCTCGCATCCAGTCGTACCTGCAGAGGCCGTACGCCTCCTCAACCGGCACCTGAAATTCTTGCAACAAGAACATCATGTGAGCTTCTTGCTGCCATCATCTCATCAGGTGGTGATCTCTGAACATGATGAACTGAAACTGAAACTGGAAACTGTAGAATGGGATGTATGCTCACCCATCTCCTGCCATGGGTGGTCTGCTCAGGCCATGACTCCAGCAACTCTGTCACCTGGAGAGCAAACATGTAGCCCTTGCAGGCCCCTTGCAGGCCACAGCTGTTCTGCTTGCTCTTGCTCTTGAAGATCCAATTCTCCCAGTGGTGTCCCCTGAATTAATTTCAGCACAACTTTGTCAGCTGATTGGTTACTCTGTTCTATGCTACTCCTGAATCTTTTACATATCTGAATGATGTGCTTGAAACTTTGACATGTAAAAAAAGTTCAGGAAAAGCTCATTGCAATTTCTGTCTCTGACACTGTTGGAAAGCTCATATTTTCAACACATGGA] [+] EMBL CF323219 [ TAGATTCTGGATAATTTAAGAATTCTGTAAAATAAATCGTGGTATCCATAGGTTGTGAAGAAACTTTAATTAGCTATGCTTTGCAAGATACATGAAAAATATCTGTAGGTTCTTCACTGGAATTGGAACCAAGTTCATTGCAACTGCGAGTGATTTGATCTGTGTAGCTATCAAATGTTTCTTAAGCATGATTTCTCTTTGTTGGTGACTTTGTTTACATGAACTATGCGTTTTTCCACATGTTAAATTCTGAATTAAGTTTCCATTTCCCTTTTCTCAAAAAAGAAAAAAACTGTTTCCATTTCCCTAAGGAACTCCTGTGAATCAATTCTGTTCTTGGAACACGGGAGATTTCTCAAACTTTTAATGAACATGTCGCAATGTTACAATTGCATCCAGTCCAGAAGATGGTTAGCTACTTTCTTCCCATTAGTTCTCAGCAGTAAGGATTAAGGAACAGTTATTAGATTGGACATCATTTTGATGATTGCAGAA ] consensusID : consensus_11809#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1104 fasta sequence [TTTTTTTTTTTTTTTTTCTTGGAACACGGGAGATTTCTCAAACTTTTAATGAACATGTCGCAATGTTACAATTTCATCCAGTCCAGAAGATGGTTAGCTACTTTCTTCCCATTAGTTCTCAGCAGTAAGGATTAAGGAACAGTTATTAGATTGGACATCATTTTGATGATTGCAGAATTAACATCTTAAATTGTTGCATGACTGCAGGTCTGCAACCCTTTCTGCAGGTGAGAGAAAGCCTG-AACCATCACCACTCAACATCTGAAACTTTGCCTCCTGGAAGTTCAGGTTCTCTGCCTCTCAGGGATCATCAGCATCATGAGCAGCAGCAGCAGCAGATCA-GGAGCATTAATCAGCACAATGCCAC-AGCTCCTTCAGCCAC-C-G-GTGGC-ATCACC-ATGTACAGGCC-GGCCGACGAGTCCAGCTCCGGCGACGGCGAGGCGCGGAGGTCATCGCCGGCGGCGAACAGGAGCTGCTCCTTGAGCTTGTCCAGCGCTTCTCGCATCCAGTCGTACCTGCAGAGGCCGTACGCCTCCTCAACCGGCACCCATCTCCTGCCATGGGTGGTCTGCTCAGGCCATGACTCCAGCAACTCTGTCACCTGGAGAGCAAACATGTAGCCCTTGCAGGCCCCTTGCAGGCCACAGCTGTTCTGCTTGCTCTTGCTCTTGAAGATCCATTCTCCCAGTGGTGTCCCACTTAGAACGCCCTTGACGCCTGCTTCCTCGAAGGCCTCTCTGCAGGCAGCTTCGCCGATGCTCTCGTCGTCCTCCCATCCACCCTTTGGGAAGATGAGATCGCTTCGCTTCGGCGTCGAGATCATGAGCACTTGCAGCCTTTCCAGCACATGATCATCATCTTGAAGGGAGCTGCTGCTGTTTTCTCCATCCTCCTTGATCATGTAAGGGATGCATCCAGAGACAAGGCGATAGCATCCTTCATAACGCTGCCGGAGGCGTCCCTGTCTCGCACAAGCCATGTTCATCGCCGGTGGCGACGACGGCGCCATCTTTTCCTTGCTCGAGAAGAACAATTTCCTTATCTGAACAATGACCTCAAGTGGACAAATCCAAGAACAACTCCAACTCTTCTTCATAAGACCAAGCT] [-] EMBL AU088690 [TTTTTTTTTTTTTTTTTCTTGGAACACGGGAGATTTCTCAAACTTTTAATGAACATGTCGCAATGTTACAATTTCATCCAGTCCAGAAGATGGTTAGCTACTTTCTTCCCATTAGTTCTCAGCAGTAAGGATTAAGGAACAGTTATTAGATTGGACATCATTTTGATGATTGCAGAATTAACATCTTAAATTGTTGCATGACTGCAGGTCTGCAACCCTTTCTGCAGGTGAGAGAAAGCCTGNAACCATCACCACTCAACATCTGAAACTTTGCCTCCTGGAAGTTCAGGTTCTCTGCCTCTCAGGGATCATCAGCATCATGAGCAGCAGCAGCAGCAGATCAGGGAGCATTAATCAGCACAATGCCACNAGCTCCTTCAGCCACACNGAGTGGCAATCACCAATGTACAGGCCTGGCCGACGAGTCCA ] [-] EMBL AK059751 [ GGGAGATTTCTCAAACTTTTAATGAACATGTCGCAATGTTACAATTTCATCCAGTCCAGAAGATGGTTAGCTACTTTCTTCCCATTAGTTCTCAGCAGTAAGGATTAAGGAACAGTTATTAGATTGGACATCATTTTGATGATTGCAGAATTAACATCTTAAATTGTTGCATGACTGCAGGTCTGCAACCCTTCCTGCAGGTGAGAGAAAGCCTG AACCATCACCACTCAACATCTGAAACTTTGCCTCCTGGAAGTTCAGGTTCTCTGCCTCTCAGGGATCATCAGCATCATGAGCAGCAGCAGCAGCAGATCA GGAGCATTAATCAGCACAATGCCAC AGCTCCTTCAGCCAC C G GTGGC ATCACC ATGTACAGGCC GGCCGACGAGTCCAGCTCCGGCGACGGCGAGGCGCGGAGGTCATCGCCGGCGGCGAACAGGAGCTGCTCCTTGAGCTTGTCCAGCGCTTCTCGCATCCAGTCGTACCTGCAGAGGCCGTACGCCTCCTCAACCGGCACCCATCTCCTGCCATGGGTGGTCTGCTCAGGCCATGACTCCAGCAACTCTGTCACCTGGAGAGCAAACATGTAGCCCTTGCAGGCCCCTTGCAGGCCACAGCTGTTCTGCTTGCTCTTGCTCTTGAAGATCCATTCTCCCAGTGGTGTCCCACTTAGAACGCCCTTGACGCCTGCTTCCTCGAAGGCCTCTCTGCAGGCAGCTTCGCCGATGCTCTCGTCGTCCTCCCATCCACCCTTTGGGAAGATGAGATCGCTTCGCTTCGGCGTCGAGATCATGAGCACTTGCAGCCTTTCCAGCACATGATCATCATCTTGAAGGGAGCTGCTGCTGTTTTCTCCATCCTCCTTGATCATGTAAGGGATGCATCCAGAGACAAGGCGATAGCATCCTTCATAACGCTGCCGGAGGCGTCCCTGTCTCGCACAAGCCATGTTCATCGCCGGTGGCGACGACGGCGCCATCTTTTCCTTGCTCGAGAAGAACAATTTCCTTATCTGAACAATGACCTCAAGTGGACAAATCCAAGAACAACTCCAACTCTTCTTCATAAGACCAAGCT] [-] EMBL CB000240 [ ttttttttTTTCTCAAACTTTTAATGAACATGTCGCAATGTTACAATTTCATCCAGTCCAGAAGATGGTTAGCTACTTTCTTCCCATTAGTTCTCAGCAGTAAGGATTAAGGAACAGTTATTAGATTGGACATCATTTTGATGATTGCAGAATTAACATCTTAAATTGTTGCATGACTGCAGGTCTGCAACCCTTTCTGCAGGTGAGAGAAAGCCTG AACCATCACCACTCAACATCTGAAACTTTGCCTCCTGGAAGTTCAGGTTCTCTGCCTCTCAGGGATCATCAGCATCATGAGCAGCAGCAGCAGCAGATCA GGAGCATTAATCAGCACAATGCCAC AGCTCCTTCAGCCAC C G GTGGC ATCACC ATGTACAGGCC GGCCGACGAGTCCAGCTCCGGCGACGGCGAGGAGCGGAGGTCATCGCCGGCGGCGAACAGGAGCTG ] [-] EMBL AK099204 [ AGAAGATGGTTAGCTACTTTCTTCCCATTAGTTCTCAGCAGTAAGGATTAAGGAACAGTTATTAGATTGGACATCATTTTGATGATTGCAGAATTAACATCTTAAATTGTTGCATGACTGCAGGTCTGCAACCCTTTCTGCAGGTGAGAGAAAGCCTG AACCATCACCACTCAACATCTGAAACTTTGCCTCCTGGAAGTTCAGGTTCTCTGCCTCTCAGGGATCATCAGCATCATGAGCAGCAGCAGCAGCAGATCA GGAGCATTAATCAGCACAATGCCAC AGCTCCTTCAGCCAC C G GTGGC ATCACC ATGTACAGGCC GGCCGACGAGTCCAGCTCCGGCGACGGCGAGGCGCGGAGGTCATCGCCGGCGGCGAACAGGAGCTGCTCCTTGAGCTTGTCCAGCGCTTCTCGCATCCAGTCGTACCTGCAGAGGCCGTACGCCTCCTCAACCGGCACCCATCTCCTGCCATGGGTGGTCTGCTCAGGCCATGACTCCAGCAACTCTGTCACCTGGAGAGCAAACATGTAGCCCTTGCAGGCCCCTTGCAGGCCACAGCTGTTCTGCTTGCTCTTGCTCTTGAAGATCCATTCTCCCAGTGGTGTCCCACTTAGAACGCCCTTGACGCCTGCTTCCTCGAAGGCCTCTCTGCAGGCAGCTTCGCCGATGCTCTCGTCGTCCTCCCATCCACCCTTTGGGAAGATGAGATCGCTTCGCTTCGGCGTCGAGATCATGAGCACTTGCAGCCTTTCCAGCACATGATCATCATCTTGAAGGGAGCTGCTGCTGTTTTCTCCATCCTCCTTGATCATGTAAGGGATGCATCCAGAGACAAGGCGATAGCATCCTTCATAACGCTGCCGGAGGCGTCCCTGTCTCGCACAAGCCATGTTCATCGCCGGTGGCGACGACGGCGCCAT ] consensusID : consensus_11809#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 667 fasta sequence [TTTTTTTTGGGGGCATGGCAGTTTCTTGGAACTTAAAAGGCAAATTATTCAGATTCTTTTTTGGATGCATGATTGGGCTTGTGCTTTTGCATATGATGATCATCATATTGTTGTTGTTGTTGTTGCTGTTGCTAATTGGGGTCTCTCACCTTTGGGAAGATGAGATCGCTTCGCTTCGGCGTCGAGATCATGAGCACTTGCAGCCTTTCCAGCACATGATCATCATCTTGAAGGGAGCTGCTGCTGTTTTCTCCATCCTCCTTGATCATGTAAGGGATGCATCTGTCAAAAGGAAAAAGGAAGATCTAGCTATCAGCTAGTATCTTTTTTTTTAATAATGCAATTGTTCTCTAAGCTTATCTAAATCATGTCATTAATTGTTCATTTACTTCAGCACGCAGCTCTTTCTTGACATTCTAAACATCTTAATTAGCATGTGATTTCATGTGACTACCTGAAAGTGCTGGAGAGAAGAGAGAACTAAGCTATATATAGTTTGCAGTTGGCATCTCCTAGAACTGTGCAAAAGCTATGCACGACCTTAGCTACTCAAGGACCTACCCCATAGACACGGCGACAGGACGCTTCACAACGCTGCCGGAGGCGGCCCTTGTCCCGTGCACCTGATCCAGCTTATCGATACCCGACCACCTGAAGGGGGGGCGCG] [+] EMBL CA762259 [TTTTTTTTGGGGGCATGGCAGTTTCTTGGAACTTAAAAGGCAAATTATTCAGATTCTTTTTTGGATGCATGATTGGGCTTGTGCTTTTGCATATGATGATCATCATATTGTTGTTGTTGTTGTTGCTGTTGCTAATTGGGGTCTCTCACCTTTGGGAAGATGAGATCGCTTCGCTTCGGCGTCGAGATCATGAGCACTTGCAGCCTTTCCAGCACATGATCATCATCTTGAAGGGAGCTGCTGCTGTTTTCTCCATCCTCCTTGATCATGTAAGGGATGCATCTGTCAAAAGGAAAAAGGAAGATCTAGCTATCAGCTAGTATCTTTTTTTTTAATAATGCAATTGTTCTCTAAGCTTATCTAAATCATGTCATTAATTGTTCATTTACTTCAGCACGCAGCTCTTTCTTGACATTCTAAACATCTTAATTAGCATGTGATTTCATGTGACTACCTGAAAGTGCTGGAGAGAAGAGAGAACTAAGCTATATATAGTTTGCAGTTGGCATCTCCTAGAACTGTGCAAAAGCTATGCACGACCTTAGCTACTCAAGGACCTACCCCATAGACACGGCGACAGGACGCTTCACAACGCTGCCGGAGGCGGCCCTTGTCCCGTGCACCTGATCCAGCTTATCGATACCCGACCACCTGAAGGGGGGGCGCG] consensusID : consensus_11809#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 398 fasta sequence [ATTGGTTCTACCAATTAAGCTAAGTTTAACCTGAATTTGTATACATATAGGTCATTGTTCAGATAAGGAAATTGTTCTTCTCGAGCAAGGAAAAGATGGCGCCGTCGTCGCCACCGGGATGAACATGGCTTGTGCGAGACAGGGACGCCTCCGGCAGCGTTATGAAGGATGCTATCGCCTTGTCTCTGGATGCATCCCTTACATGATCAAGGAGGATGGAGAAAACAGCAGCAGCTCCCTTCAAGATGATGATCATGTGCTGGAAAGGCTGCAAGTGCTCATGATCTCGACGCCGAAGCGAAGGNTCCTCATCTTCCCAAAGGGTGGATGGGAGGACGACGAGAGCATCGGCGAANTGCCCTGCAGAAAGGCCTTCGAGGGAAGCAGGCGTCAAAGGG] [+] EMBL OSS12577A [ATTGGTTCTACCAATTAAGCTAAGTTTAACCTGAATTTGTATACATATAGGTCATTGTTCAGATAAGGAAATTGTTCTTCTCGAGCAAGGAAAAGATGGCGCCGTCGTCGCCACCGGGATGAACATGGCTTGTGCGAGACAGGGACGCCTCCGGCAGCGTTATGAAGGATGCTATCGCCTTGTCTCTGGATGCATCCCTTACATGATCAAGGAGGATGGAGAAAACAGCAGCAGCTCCCTTCAAGATGATGATCATGTGCTGGAAAGGCTGCAAGTGCTCATGATCTCGACGCCGAAGCGAAGGNTCCTCATCTTCCCAAAGGGTGGATGGGAGGACGACGAGAGCATCGGCGAANTGCCCTGCAGAAAGGCCTTCGAGGGAAGCAGGCGTCAAAGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11809#0 CTATATGGGTGTTGCTGAATCAGTCTTAAACTCAAAATAAGCTCTATATGGGGATTTTGT 60 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 TGCTGAACAGTCATAAGGCATGATGGATAAACAATTTTTTCCTGCTTAGCAGCTTGTGGT 120 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 ACGGCTATCTCATAAGTCCTATCTTAGCTAGAGAGTTCCTCATTTAGCTGTTGCGTAGAT 180 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 TCTGCTGGTTGATTTTAATTAGCTGTGCTTTGCAAGATACATGCGTATCAGCAGGTTTGA 240 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 GCTGATCAGCTGAAACAAAAGGCATGTTTCTTTATGCTCCAATTTGCTCCAGGATATCAA 300 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 CGGCACTAATATTTTTGCACGACATAATTCTCTCGTAAAGTTAAAGAGTTACATAGGATT 360 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 TTGGTTAGGACTGGCTTTGTTTTGACTAGATGACAATGAGTTTACTGTTCTGATTTCTAA 420 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 ACCATGATGAGTAGAAATTTTTTTCCCACTGAAGTGCTTGCTATATCTTTACTGCAATGT 480 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 GTGTTTGCATAACAGATGAGTNTAATTATGGTTGTGAAACCTTATTGATTGTGCTCCATT 540 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 GAGCTTCATCATGATGTGCTACGCGTGTTGCTGAATAAGTCGAAAAGTCGAAAGGAGCTG 600 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 GGTTAGTGGGTTCTGTTAATAAGACATGATGTGCAGTCATTTTTTGCTGCTTAGCATCGT 660 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 GTGGTAAATGATATCTTAACTAGAGAGCTTCACATTTCGCTGTTGCGTAGATTCTGGATA 720 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 ATTTAAGAATTCTGTAAAATAAATCGTGGTATCCATAGGTTGTGAAGAAACTTTAATTAG 780 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 CTATGCTTTGCAAGATACATGAAAAATATCAGTAGGTTCTTCACTGGAATTGGAACCAAG 840 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 TTCATTGCAACTGCGAGTGATTTGATCTGTGTAGCTATCAAATGTTTCTTAAGCATTATT 900 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 TCTCTTTGTTGGTGACTTTGTTTACATGAACTATGCGTTTTTCCACATGTTAAATTCTGA 960 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 ATTAAGTTTCCATTTCCCTTTTCTCAAAAAGAAAAAAACGGTTTCCATTTCCCTAAGGAA 1020 consensus_11809#1 ------------------------------------------------------------ consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 CTCCTGTGAATCAATTCTGTTCTTGGAACACGGGAGATTTCTCAAACTTTTAATGAACAT 1080 consensus_11809#1 ----TTTTTTTTTTTTTTTTTCTTGGAACACGGGAGATTTCTCAAACTTTTAATGAACAT 56 consensus_11809#2 ---------------TTTTTTTTGGGGGCATGGCAGTTTCTTGGAACTTAAAAGGCAAAT 45 consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 GTCGCAATGTTACAATTTCATCCAGTCCAGAAGATGGTTAGCTACTTTCTTCCCATTAGT 1140 consensus_11809#1 GTCGCAATGTTACAATTTCATCCAGTCCAGAAGATGGTTAGCTACTTTCTTCCCATTAGT 116 consensus_11809#2 TATTCAGATTC-----TTTTTTGGATGCATGATTGGGCTTGTGCTTTTGCATATGATGAT 100 consensus_11809#3 -------------------------------ATTGGTTCTACCAATTAAGCTAAGTTTAA 29 * * ** * consensus_11809#0 TCTCA-GCAGTAAGGATTAAGGA-ACAGTTATTAGATTGGACATC--ATTTTGATGATTG 1196 consensus_11809#1 TCTCA-GCAGTAAGGATTAAGGA-ACAGTTATTAGATTGGACATC--ATTTTGATGATTG 172 consensus_11809#2 CATCATATTGTTGTTGTTGTTGTTGCTGTTGCTAATTGGGGTCTCTCACCTTTGGGAAGA 160 consensus_11809#3 CCTGAATTTGTATACATATAGGTCATTGTT--CAGATAAGGAAATTGTTCTTCTCGAGCA 87 * * ** * * *** * * * ** ** consensus_11809#0 CAGAATTAACATCTTAAATTGTTGCATGACTGCAGGTCTGCAACCCTTTCTGCAGGTGAG 1256 consensus_11809#1 CAGAATTAACATCTTAAATTGTTGCATGACTGCAGGTCTGCAACCCTTTCTGCAGGTGAG 232 consensus_11809#2 TGAGATCGCTTCGCTTCGGCGTCGAGATCATGAGCACTTGCAGCCTTTCCAGCACATGAT 220 consensus_11809#3 AGGAAAAGATG-GCGCCGTCGTCGC-CACCGGGATGAACATGGCTTGTGCGAGACAGGGA 145 * ** * * * * * * * consensus_11809#0 AGAAAGCCTGAACCATCACCACTCAACATCTGAAACTTTGCCTCCTGGAAGTTCAGGTTC 1316 consensus_11809#1 AGAAAGCCTGAACCATCACCACTCAACATCTGAAACTTTGCCTCCTGGAAGTTCAGGTTC 292 consensus_11809#2 CATCATCTTGAAGGGA-GCTGCT--GCTGTTTTCTCCATCCTCCTTGATCATGTAAGGGA 277 consensus_11809#3 CGCC-TCCGGCAGCGTTATGAAG--GATGCTATCGCCTTGTCTC-TGGATGCATCCCTTA 201 * * * * * * * ** consensus_11809#0 TCTGCCTCTCAGGGATCATCAGCATCATGAGCAGCAGCAGCAGCAGATCAGGAGCATTAA 1376 consensus_11809#1 TCTGCCTCTCAGGGATCATCAGCATCATGAGCAGCAGCAGCAGCAGATCAGGAGCATTAA 352 consensus_11809#2 TGCATCTGTCAAAAGGAAAAAGGAAGATC--------TAGCTATCAGCTAGTATCTTTTT 329 consensus_11809#3 CATG---ATCAAGGAGGATGGAGAAAA----------CAGCAGCAGCTC-----CCTTCA 243 *** * * * *** * ** consensus_11809#0 TCAGCACAATGCCACAGCTCCTTCAGCCACCGGTGGCATCACCATGT-ACAGGCCGGCCG 1435 consensus_11809#1 TCAGCACAATGCCACAGCTCCTTCAGCCACCGGTGGCATCACCATGT-ACAGGCCGGCCG 411 consensus_11809#2 TTTTAATAATGCAATTGTTCTCTAAGCT-----TATCTAAATCATGTCATTAATTGTTCA 384 consensus_11809#3 AGATGATGAT-CATGTGCTGGAAAGGCTGCAAGTG--CTCATGATCTCGACGCCGAAGCG 300 * ** * * * ** * * ** * * consensus_11809#0 ACGAGTCCAGCTC-CGGCGACGGCGAGGCGCGGAGGTCATCGCCGGCGGCGAACAGGAGC 1494 consensus_11809#1 ACGAGTCCAGCTC-CGGCGACGGCGAGGCGCGGAGGTCATCGCCGGCGGCGAACAGGAGC 470 consensus_11809#2 TTTACTTCAGCACGCAGCTCTTTCTTGACATTCTAAACATCTTAATTAGCA------TGT 438 consensus_11809#3 AAGGNTCCTCATCTTCCCAAAGGGTGGATG-GGAGGACGACGAGAGCATCGGCGAANTGC 359 * * * * * * * * * consensus_11809#0 TGCTCCTTGAGCTTGTCCAGCGCTTCTCGCATCCAGTCGTACCTGCAGAGGCCGTACGCC 1554 consensus_11809#1 TGCTCCTTGAGCTTGTCCAGCGCTTCTCGCATCCAGTCGTACCTGCAGAGGCCGTACGCC 530 consensus_11809#2 GATTTCATGTGACTACCTGAAAGTGCTGGAGAGAAGAGAGAACT----AAGCTATATATA 494 consensus_11809#3 CCTGCAGAAAGGCCTTCGAGGGAAGCAGGCGTCAAAGGG--------------------- 398 * * * * * consensus_11809#0 TCCT-CAACCGGCACCTGAAATTCTTGCAACAAGAACATCATGTGAGCTTCTTGCT-GCC 1612 consensus_11809#1 TCCT-CAACCGGCACCC--ATCTCCTGCCATGGGTG-GTCTGCTCAGGCCATGACT-CCA 585 consensus_11809#2 GTTTGCAGTTGGCATCT---CCTAGAACTGTGCAAAAGCTATGCACGACCTTAGCTACTC 551 consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 ATCATCTCATCAGGTGGTGATCTCTGAACATGATGAACTGAAACTGAAACTGGAAACTGT 1672 consensus_11809#1 GCAACTCTGTCACCTGGAGAGC---AAACATGTAGCCCTTGCAGGCCCCTTGCAGGCCAC 642 consensus_11809#2 AAGGACCTACCCCATAGACACGG--CGACAGGACGC-TTCACAACGCTGCCGGAGGCGGC 608 consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 AGAATGGGATGTATGCTCACCC--------ATC--TCCTGCCATGGGTGGTCTGCTCAGG 1722 consensus_11809#1 AGC-TGTTCTGCTTGCTCTTGCTCTTGAAGATCCATTCTCCCAGTGGTGTCCCACTTAGA 701 consensus_11809#2 CCT-TGTCCCG--TGCACCTG---------ATCCAGCTTATCGATACCCGACCACCTGAA 656 consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 CCATGACTCCAGCAACTCTGTCACCTGGAGAGCAAACATGTAGCCCTTGCAGGCCCCTTG 1782 consensus_11809#1 --ACGCCCTTGACG--CCTGCTTCCTCGAAGGCCTCTCTGCAG-----GCAGCTTCGCCG 752 consensus_11809#2 GGGGGGGCGCG------------------------------------------------- 667 consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 CAGGCCACAGCTGTTCTGCTTGCTCTTGCTCTTGAAGATCCAATTCTCCCAGT--GGTGT 1840 consensus_11809#1 -ATGCTCTCGTCGTCCTCCCATCCACCCTTTGGGAAGATGAGATCGCTTCGCTTCGGCGT 811 consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 CC------------CCTGAATTAATTTCAGCACAACTTTGTCAGCTGATTGGTTACT--- 1885 consensus_11809#1 CGAGATCATGAGCACTTGCAGCCTTTCCAGCACATGATCATCATCTTGAAGGGAGCTGCT 871 consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 -CTGTTCTATGC-TACTCCTGAATCTTTTA-------CATATCTGAATGATGTGCTTGAA 1936 consensus_11809#1 GCTGTTTTCTCCATCCTCCTTGATCATGTAAGGGATGCATCCAGAGACAAGGCGATAGCA 931 consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 ACTTTGACA----TGTAAAAAAAGTTCAGGAAAAGCTCATTGCAATTTCTGTCTCTGACA 1992 consensus_11809#1 TCCTTCATAACGCTGCCGGAGGCGTCCCTGTCTCGCACAA-GCCATGTTCATCGCCGGTG 990 consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 CTGTTGGAAAGCTCATATTTTCAACACATGGA---------------------------- 2024 consensus_11809#1 GCGACGACGGCGCCATCTTTTCCTTGCTCGAGAAGAACAATTTCCTTATCTGAACAATGA 1050 consensus_11809#2 ------------------------------------------------------------ consensus_11809#3 ------------------------------------------------------------ consensus_11809#0 ------------------------------------------------------ consensus_11809#1 CCTCAAGTGGACAAATCCAAGAACAACTCCAACTCTTCTTCATAAGACCAAGCT 1104 consensus_11809#2 ------------------------------------------------------ consensus_11809#3 ------------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||