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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11819#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 4202 fasta sequence
[CTCCTCCCCCTCGGCTCGCAACCGCCATGGAGCCATCGCCGGAGATTCCGCCGCCGCCACCCGCCTTCGCCGCCGGCGGAGAAGGCGATCCGCATGCTCCCACCACAGCCGCCGCCCGCTCCTCCTCCTCCTCCTCTCTATTTCCTCTCTTCCCCCTCTCGGCGCCCGAGGAATCCTCCGCCCCCGCGGCGGGGTCCCAGTGGCTCTCAAACCCTAGCTTCTCCTTCGACGCCTCCTCCCTCAACATCCCCGCCACTGCCTCCTCATCCGTACCGCCGCCGCTAAGCGCCTCGTCGGACGAAGAGGAGGCGCCACGGCCCGCACCTGCTAAGTATGACCTGCTGCCCTACTCACCGTCGCCTCCGGCCTCCGACGAGGAGAGGAGGGACAGACGGAAGGATAGGAAGAGGAGGAAGCGGAGGCGGGAGAAGGAGCGGTACAATAGCGCGGAAGCCTCGCGAAAGCCGGGGGTTCGCGCTTGGGCTGGGTCGGAGACGAAGTTGGCTAAGGATTACTACTTCGACGCCAAGGGCGACCAGGATAACTTGGCGTTTGGATCGATATACAGAATGGATATTGCACGCTACAAGTCTCAAAACATGCCAGAGGCACGTGGTCTAAAACGGCTTTTGTTTCATAACTTGGGTGTCTCGGTACATATGGGTCATGAGTCAGATTTAGATGGACTGAATAGCAAAGCAAGAGCTGGAGGTCGCTACTACTCGGCGAAATATGCAGTTGTAGAAAGAAATAAGGGTTTCAAACACCTAAAAGTATTGAAAAAGGATAACTCTGCAATTCTCCCAGAAGATTTTATCCCCCTAGGGATACCATCTCTTCCTGAAAATAACACTACTGGGGAACAGGAACTTGAAGAATCTTGGGAAGATGAAATACTTCGGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTACCTCACAATGAGAAAATTTGGTTGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTTTGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATAATGAAGAATTATTGCTTTGTCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATCTCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAACAGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGTCTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTAT--------GATACACAATATGATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATATTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTATTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGTAAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGGGCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGACAAAATATAGATATACAAGAAAATACCCAAGAAACTGAAAGGGGTGGTTGGAATGGTTGGTTTGATCCTTCTCTAAGGACTAATAGTGAAACAAGCAAAGTGGAACCATCGACATCTGATGGAAATGATGCAGAAAATCCAGATGATGAGGACCCATCTGCACAAGAAGATGTTGAATCTTTGCTGAAAAA-CTTGGGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGATGGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTGGATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAATTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTTCTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCAACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGATGACATTCAGGAAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAATGGTGTCATTGTTAGGAACTATGCATGAATTTTCTCAAAGGCCTGGCACTGCGAAATTTCTGAAAAATGCAATATTGCTTTTCCTTGATGTATTCCCTCGTAATCATATCCTGGAGGAAGCTGTTCTTGTTACCCCCCAAATTCATACAGCTCAAGAAAAATATCTGGCTACTCCAGCCACCGCATCCCGGGCTTTGGCCAAAAATCTATTGAAGAAAGACAGACAGGATCTTTTGCTTTGTGGAATATATGGACGAATTGAGGCTATGAATGGGGACTTTGTCAAAGCAAGGCATATATTCGACTTGGCACTATCAACTTCTCAAGGAGCTTCAGAGGATCTCAGGAAGAAGGTTCCTATTCTTTATTTTTGGTATGCTGAGATGGAGCTAGCAATATATGCTTCAAGAAACAATTCTGACTCTGTGGATCGTGCAATCCACGTTCTGTCCTGCTTAGGGGACAAGGCGAAGTATGCTTCTTTTGATGGGTCTATATCACGACCTCAGGTGTTAAAGGCTCGTCAAGGATTTAAAGAGCAGATTAGAAGCTTGCGATCTTCATTTGCAAGTGATGGTATGAAAGAAGAGTCTGTTGCTCTAATCTGCTCAGCATCTTTGTTTGAGAGTATGACATCTGGTTTTGCTTCTGGTCTTGAAGTTATAGAAGAGACCTTTTATATGACACCTTCAGAGAACAACCATAGCTTAGAATTCGAAGAATTGTGGATGCACTACATCAAGCAGCTTCAGAAAAATCTTAATCAGTTGAGTCTCTCAAGGGTTTGGCCAAAAATATCGCAAGGAATACAAACATATCCGTACAACCCAAAATCATATGCAGCCATGTTAACTCTAGGTTGCCTTTACAGTGTTTCCAATAATCTACGTCTCACACTCGACAAATTTAATCAAAGGGATCCTTCCATAATTGGCTTGCTCTTTGCTTTGTCCTTTGAATTGTGCAAAGCTGGATCAGACAATAGAATACACAATCTGTTTGAGAGAGCTCTGACTGATGATAAGTTACAGAAATCCGTTCTGTTGTGGCGCTGTTATCTAGCTTATGAGGCAGAGATAGCTTGCAATGCTTCTGCAGCTCGGCGTGTGTTCTTCAGAGCTATACATGCCTGTCCATGGTCTAAACGATTATGGCTTGATGGATTTGAAAAACTGAGTTCAATTTTGACACTGAAAGAGTTGTCAGATCTCCAAGAAGTAATGCGTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTACATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTT-TTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTTGAAAAAAAAAAGAAACTACCGTAAAAATAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK100349 [CTCCTCCCCCTCGGCTCGCAACCGCCATGGAGCCATCGCCGGAGATTCCGCCGCCGCCACCCGCCTTCGCCGCCGGCGGAGAAGGCGATCCGCATGCTCCCACCACAGCCGCCGCCCGCTCCTCCTCCTCCTCCTCTCTATTTCCTCTCTTCCCCCTCTCGGCGCCCGAGGAATCCTCCGCCCCCGCGGCGGGGTCCCAGTGGCTCTCAAACCCTAGCTTCTCCTTCGACGCCTCCTCCCTCAACATCCCCGCCACTGCCTCCTCATCCGTACCGCCGCCGCTAAGCGCCTCGTCGGACGAAGAGGAGGCGCCACGGCCCGCACCTGCTAAGTATGACCTGCTGCCCTACTCACCGTCGCCTCCGGCCTCCGACGAGGAGAGGAGGGACAGACGGAAGGATAGGAAGAGGAGGAAGCGGAGGCGGGAGAAGGAGCGGTACAATAGCGCGGAAGCCTCGCGAAAGCCGGGGGTTCGCGCTTGGGCTGGGTCGGAGACGAAGTTGGCTAAGGATTACTACTTCGACGCCAAGGGCGACCAGGATAACTTGGCGTTTGGATCGATATACAGAATGGATATTGCACGCTACAAGTCTCAAAACATGCCAGAGGCACGTGGTCTAAAACGGCTTTTGTTTCATAACTTGGGTGTCTCGGTACATATGGGTCATGAGTCAGATTTAGATGGACTGAATAGCAAAGCAAGAGCTGGAGGTCGCTACTACTCGGCGAAATATGCAGTTGTAGAAAGAAATAAGGGTTTCAAACACCTAAAAGTATTGAAAAAGGATAACTCTGCAATTCTCCCAGAAGATTTTATCCCCCTAGGGATACCATCTCTTCCTGAAAATAACACTACTGGGGAACAGGAACTTGAAGAATCTTGGGAAGATGAAATACTTCGGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTCCCTCACAATGAGAAAATTTGGTTGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTTTGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATAATGAAGAATTATTGCTTTATCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATCTCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAACAGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGTCTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTATGTAGGCAGGATACACAATATGATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATATTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTATTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGTAAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGGGCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGACAAAATATAGATATACAAGAAAATACCCAAGAAACTGAAAGGGGTGGTTGGAATGGTTGGTTTGATCCTTCTCTAAGGACTAATAGTGAAACAAGCAAAGTGGAACCATCGACATCTGATGGAAATGATGCAGAAAATCCAGATGATGAGGACCCATCTGCACAAGAAGATGTTGAATCTTTGCTGAAAAAGCTTGGGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGATGGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTGGATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAATTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTTCTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCAACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGGTGACATTCAGGAAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAATGGTGTCATTGTTAGGAACTATGCATGAATTTTCTCAAAGGCCTGGCACTGCGAAATTTCTGAAAAATGCAATATTGCTTTTCCTTGATGTATTCCCTCGTAATCATATCCTGGAGGAAGCTGTTCTTGTTACCCCCCAAATTCATACAGCTCAAGAAAAATATCTGGCTACTCCAGCCACCGCATCCCGGGCTTTGGCCAAAAATCTATTGAAGAAAGACAGACAGGATCTTTTGCTTTGTGGAATATATGGACGAATTGAGGCTATGAATGGGGACTTTGTCAAAGCAAGGCATATATTCGACTTGGCACTATCAACTTCTCAAGGAGCTTCAGAGGATCTCAGGAAGAAGGTTCCTATTCTTTATTTTTGGTATGCTGAGATGGAGCTAGCAATATATGCTTCAAGAAACAATTCTGACTCTGTGGATCGTGCAATCCACGTTCTGTCCTGCTTAGGGGACAAGGCGAAGTATGCTTCTTTTGATGGGTCTATATCACGACCTCAGGTGTTAAAGGCTCGTCAAGGATTTAAAGAGCAGATTAGAAGCTTGCGATCTTCATTTGCAAGTGATGGTATGAAAGAAGAGTCTGTTGCTCTAATCTGCTCAGCATCTTTGTTTGAGAGTATGACATCTGGTTTTGCTTCTGGTCTTGAAGTTATAGAAGAGACCTTTTATATGACACCTTCAGAGAACAACCATAGCTTAGAATTCGAAGAATTGTGGATGCACTACATCAAGCAGCTTCAGAAAAATCTTAATCAGTTGAGTCTCTCAAGGGTTTGGCCAAAAATATCGCAAGGAATACAAACATATCCGTACAACCCAAAATCATATGCAGCCATGTTAACTCTAGGTTGCCTTTACAGTGTTTCCAATAATCTACGTCTCACACTCGACAAATTTAATCAAAGGGATCCTTCCATAATTGGCTTGCTCTTTGCTTTGTCCTTTGAATTGTGCAAAGCTGGATCAGACAATAGAATACACAATCTGTTTGAGAGAGCTCTGACTGATGATAAGTTACAGAAATCCGTTCTGTTGTGGCGCTGTTATCTAGCTTATGAGGCAGAGATAGCTTGCAATGCTTCTGCAGCTCGGCGTGTGTTCTTCAGAGCTATACATGCCTGTCCATGGTCTAAACGATTATGGCTTGATGGATTTGAAAAACTGAGTTCAATTTTGACACTGAAAGAGTTGTCAGATCTCCAAGAAGTAATGCGTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTACATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTT TTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTTGAAAAAAAAAAG ]
[+] EMBL CB631723 [ TGGGAAGATGAAATACTTCGGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTACCTCACAATGAGAAAATTTGGTTGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTTTGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATAATGAAGAATTATTGCTTTGTCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATCTCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAACAGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGTCTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTAT GATACACAATATGATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATATTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTATTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGTAAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGGGCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGACAAAATATAGATATACAA ]
[+] EMBL CB632002 [ tgggccttATGAAATACTTCGGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTACCTCACAATGAGAAAATTTGCTTGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTTTGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATAATGAAGAATTATTGCTTTGTCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATCTCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAACAGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGTCTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTAT GATACACAATATGATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATATTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTATTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGTAAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGGGCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGAC ]
[+] EMBL CB640408 [ TTGCTGAAAAA CTTGGGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGATGGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTGGATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAATTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTTCTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCAACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGATGACATTCAGGAAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAATGGTGTCATTGTTAGGAACTATGCATGAATTTTCTCAAAGGCCTGGCACTGCGAAATTTCTGAAAAATGCAATATTGCTTTTCCTTGAT ]
[+] EMBL CB640336 [ TTGCTGAAAAA CTTGGGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGATGGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTGGATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAATTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTTCTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCAACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGATGACATTCAGGAAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAATGGTGTCATTGTTAGGAACTATGCATGAANTTTCTCAAAG ]
[-] EMBL CF306865 [ CATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTACATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTT TTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACA TTTTTTTTTGAAAAAAAAAAGAAACTACCGTAAAAATAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI806093 [ AGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCC AAATGGAACATC AAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATC AAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTCCTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATAaaaaaa ]
consensusID : consensus_11819#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 758 fasta sequence
[GCGTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTATATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAATATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTGAAAAAAAAAAAAGAAACTCCCGTAAAAATATGACTCGGTAATTACA]
[-] EMBL CB631724 [GCGTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTATATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAATATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTGAAAAAAAAAAAAGAAACTCCCGTAAAAATATGACTCGGTAATTACA]
[-] EMBL CB632003 [ GTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTATATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAATATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTGAAAAAAAAAAAAGGGACTACCGTAAAAATATGACTCGGTAATTCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11819#0 CTCCTCCCCCTCGGCTCGCAACCGCCATGGAGCCATCGCCGGAGATTCCGCCGCCGCCAC 60
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CCGCCTTCGCCGCCGGCGGAGAAGGCGATCCGCATGCTCCCACCACAGCCGCCGCCCGCT 120
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CCTCCTCCTCCTCCTCTCTATTTCCTCTCTTCCCCCTCTCGGCGCCCGAGGAATCCTCCG 180
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CCCCCGCGGCGGGGTCCCAGTGGCTCTCAAACCCTAGCTTCTCCTTCGACGCCTCCTCCC 240
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TCAACATCCCCGCCACTGCCTCCTCATCCGTACCGCCGCCGCTAAGCGCCTCGTCGGACG 300
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 AAGAGGAGGCGCCACGGCCCGCACCTGCTAAGTATGACCTGCTGCCCTACTCACCGTCGC 360
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CTCCGGCCTCCGACGAGGAGAGGAGGGACAGACGGAAGGATAGGAAGAGGAGGAAGCGGA 420
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GGCGGGAGAAGGAGCGGTACAATAGCGCGGAAGCCTCGCGAAAGCCGGGGGTTCGCGCTT 480
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GGGCTGGGTCGGAGACGAAGTTGGCTAAGGATTACTACTTCGACGCCAAGGGCGACCAGG 540
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 ATAACTTGGCGTTTGGATCGATATACAGAATGGATATTGCACGCTACAAGTCTCAAAACA 600
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TGCCAGAGGCACGTGGTCTAAAACGGCTTTTGTTTCATAACTTGGGTGTCTCGGTACATA 660
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TGGGTCATGAGTCAGATTTAGATGGACTGAATAGCAAAGCAAGAGCTGGAGGTCGCTACT 720
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 ACTCGGCGAAATATGCAGTTGTAGAAAGAAATAAGGGTTTCAAACACCTAAAAGTATTGA 780
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 AAAAGGATAACTCTGCAATTCTCCCAGAAGATTTTATCCCCCTAGGGATACCATCTCTTC 840
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CTGAAAATAACACTACTGGGGAACAGGAACTTGAAGAATCTTGGGAAGATGAAATACTTC 900
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTACCTCACAATGAGAAAATTTGGT 960
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTT 1020
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATA 1080
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 ATGAAGAATTATTGCTTTGTCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATC 1140
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAAC 1200
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 AGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGT 1260
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTATGATACACAATAT 1320
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATA 1380
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTA 1440
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGT 1500
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 AAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGG 1560
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGACAAAATATAGATATA 1620
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CAAGAAAATACCCAAGAAACTGAAAGGGGTGGTTGGAATGGTTGGTTTGATCCTTCTCTA 1680
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 AGGACTAATAGTGAAACAAGCAAAGTGGAACCATCGACATCTGATGGAAATGATGCAGAA 1740
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 AATCCAGATGATGAGGACCCATCTGCACAAGAAGATGTTGAATCTTTGCTGAAAAACTTG 1800
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGAT 1860
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTG 1920
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAA 1980
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTT 2040
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCA 2100
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 ACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGATGACATTCAGG 2160
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 AAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAA 2220
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TGGTGTCATTGTTAGGAACTATGCATGAATTTTCTCAAAGGCCTGGCACTGCGAAATTTC 2280
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TGAAAAATGCAATATTGCTTTTCCTTGATGTATTCCCTCGTAATCATATCCTGGAGGAAG 2340
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CTGTTCTTGTTACCCCCCAAATTCATACAGCTCAAGAAAAATATCTGGCTACTCCAGCCA 2400
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CCGCATCCCGGGCTTTGGCCAAAAATCTATTGAAGAAAGACAGACAGGATCTTTTGCTTT 2460
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GTGGAATATATGGACGAATTGAGGCTATGAATGGGGACTTTGTCAAAGCAAGGCATATAT 2520
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TCGACTTGGCACTATCAACTTCTCAAGGAGCTTCAGAGGATCTCAGGAAGAAGGTTCCTA 2580
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TTCTTTATTTTTGGTATGCTGAGATGGAGCTAGCAATATATGCTTCAAGAAACAATTCTG 2640
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 ACTCTGTGGATCGTGCAATCCACGTTCTGTCCTGCTTAGGGGACAAGGCGAAGTATGCTT 2700
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CTTTTGATGGGTCTATATCACGACCTCAGGTGTTAAAGGCTCGTCAAGGATTTAAAGAGC 2760
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 AGATTAGAAGCTTGCGATCTTCATTTGCAAGTGATGGTATGAAAGAAGAGTCTGTTGCTC 2820
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TAATCTGCTCAGCATCTTTGTTTGAGAGTATGACATCTGGTTTTGCTTCTGGTCTTGAAG 2880
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TTATAGAAGAGACCTTTTATATGACACCTTCAGAGAACAACCATAGCTTAGAATTCGAAG 2940
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 AATTGTGGATGCACTACATCAAGCAGCTTCAGAAAAATCTTAATCAGTTGAGTCTCTCAA 3000
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 GGGTTTGGCCAAAAATATCGCAAGGAATACAAACATATCCGTACAACCCAAAATCATATG 3060
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CAGCCATGTTAACTCTAGGTTGCCTTTACAGTGTTTCCAATAATCTACGTCTCACACTCG 3120
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 ACAAATTTAATCAAAGGGATCCTTCCATAATTGGCTTGCTCTTTGCTTTGTCCTTTGAAT 3180
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TGTGCAAAGCTGGATCAGACAATAGAATACACAATCTGTTTGAGAGAGCTCTGACTGATG 3240
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 ATAAGTTACAGAAATCCGTTCTGTTGTGGCGCTGTTATCTAGCTTATGAGGCAGAGATAG 3300
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CTTGCAATGCTTCTGCAGCTCGGCGTGTGTTCTTCAGAGCTATACATGCCTGTCCATGGT 3360
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 CTAAACGATTATGGCTTGATGGATTTGAAAAACTGAGTTCAATTTTGACACTGAAAGAGT 3420
consensus_11819#1 ------------------------------------------------------------
consensus_11819#0 TGTCAGATCTCCAAGAAGTAATGCGTGACAAGGAATTGCACATTCGAACTGACATTTATG 3480
consensus_11819#1 ----------------------GCGTGACAAGGAATTGCACATTCGAACTGACATTTATG 38
**************************************
consensus_11819#0 AGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAAT 3540
consensus_11819#1 AGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAAT 98
************************************************************
consensus_11819#0 TCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGAT 3600
consensus_11819#1 TCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGAT 158
************************************************************
consensus_11819#0 CTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCAT 3660
consensus_11819#1 CTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCAT 218
************************************************************
consensus_11819#0 GGAATGTGATCTGGACACGATGTACATCCAAAGCATCTTTAGATTGGCAATCTCGTGACA 3720
consensus_11819#1 GGAATGTGATCTGGACACGATGTATATCCAAAGCATCTTTAGATTGGCAATCTCGTGACA 278
************************ ***********************************
consensus_11819#0 TATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTC 3780
consensus_11819#1 TATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTC 338
************************************************************
consensus_11819#0 CAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCA 3840
consensus_11819#1 CAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCA 398
************************************************************
consensus_11819#0 ATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCC 3900
consensus_11819#1 ATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCC 458
************************************************************
consensus_11819#0 AAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCT 3960
consensus_11819#1 AAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAATATTACTGCGTCT 518
*********************************************** ************
consensus_11819#0 TCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTC 4020
consensus_11819#1 TCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTC 578
************************************************************
consensus_11819#0 ATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAG 4080
consensus_11819#1 ATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAG 638
************************************************************
consensus_11819#0 CTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGA 4140
consensus_11819#1 CTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGA 698
************************************************************
consensus_11819#0 CACATTTTTTTTTTGAAAAAAAAAA-GAAACTACCGTAAAAATAAAAAAAAAAAAAAAAA 4199
consensus_11819#1 CACATTTTTTTTTGAAAAAAAAAAAAGAAACTCCCGTAAAAATATGACTCGGTAATTACA 758
************* ********** ****** *********** * ** * *
consensus_11819#0 AAA 4202
consensus_11819#1 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||