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Oryza sativa
cluster # 11821 cluster # 11821       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11821#0 length = 2027 sequences # 8  
consensus_11821#1 length = 319 sequences # 1  

consensusID : consensus_11821#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2027
fasta sequence
                              [GTGCGCGCTGCAACGCATCCTCTCCTCTCCTAGATCCCATCCGCATCTTCTTCCTCGTTTGACATTGCCCCTGTTGCTTGCTTCACGTCTCCTCTTCATGTGATCTGAGGCGCTCGCTTTCGGATTCTTGCTCTTCTCGGCGGCTCGCGTTGGGGGAGCGGTGGTGGGGAGGAGATGGGGTTTTTCCGCACTGTGCTGGGTTTCTTCGGGTTTGGGGTGGGAGTTACCATGGGGCTTGTGATTGGGTACTACCTCTTCATCTACTTCCAGCCCACCGACGTCAAGGACCCTGTAATCAGGCCACTTGTTGAACTTGATACAAAATCTCTAGAAAGCATGCTTCCTGAGGTTCCTCATTGGGTGAAGAATCCAGACTTTGACCGGATTGATTGGCTTAACAAGTTTGTCGAAAACATTTGGCCTTATCTTGACAAGGCAATATGTAAAACTGCAAAGGAAATCGCTAAGCCAATTATTGCTGAGAACACTGCCAAGTATAAGATTGATTCGGTTGAATTTGAGACATTAACATTAGGTTCATTACCACCAACATTTCAAGGGATGAAGGTCTACACCACAGATGAGCAAGAACTTATAATGGAACCTTCCATCAAGTGGGCTGGAAATCCGAATATCACTGTTGTTGTCAAAGCATTTGGGCTAAAAGCAACTGCACAGGTTATTGATTTGCATGTTTTTGCTCTACCACGCATAACGTTGAAGCCCTTGGTGCCTAGCTTTCCTTGTTTTGCTAAAATAGTTGTTTCACTTATGGAGAAGCCACATGTTGATTTTGGTCTGAAACTCTTAGGAGCAGATCTCATGGCAATTCCAGGTCTCTATGTATTTGTTCAGGAGATTATCAAGACTCAGGTAGCAAACATGTACTTGTGGCCAAAAGTACTTGAGGTGCCAATCATGGATCCAGCAAAAGCACAAAAGAAGCCTGTTGGAATTTTGCATGTTAACATCGTACGGGCTGTCAAACTCACCAAAAAGGATTTTCTGGGAAAATCGGATCCATATGTGAAGTTAAAGCTAACAGAGGAAAAACTCCCATCAAAGAAAACGTCAGT-GAAGCGAAGCAACTTGAACCCTGAATGGAATGAAGATTTCAAATTAGTTGTCAAAGACCCAGAATCTCAGGCTCTTGAGCTTACTGTTTACGATTGGGAGCAGGTTGGGAAGCACGACAAGATTGGAATGAGTGTTATCCCATTGAAAGAGCTTATTCCTGATGAGGCAAAGTCACTTACACTTGACTTACACAAGACTATGGATGCTAATGACCCAGCAAATGA-CAAGTTCCGGGGGCAGCTCACTGTTGATGTAACATATAAGCCTTTCAAGGAAGGTGATTCTGATGTTGATACAAGTGATGAATCTGGCACCA-TTGAAAAAGCCCCTGATGGCACACCGGAA-GGTGGTGGTTTGCTGGTAGTTATCGTTCATGAAGCACAAGACGTTGAAGGAAAGCACCACACTAATCCATATGTAAG-AATTGTGTTTAGAGGTGAAGAAAGGAAGACCAAGCATATTAAGAAGAATCGTGATCCACGTTGGGAGCAAGAATTTCAGTTTGTCTGCGAGGAACCACCCATAAATGATAAAATGCAAATTGAAGTCATTAGCAGACCACCAAGCATCGGTATACATTCCAAGGAAAATCTTGGCTATGTTGTCATAAGTCTTGCAGATGTTATAAACAATAAGAGGATCAATGAGAAATATCATCTAATTGACTCGAAAAATGGCCGCATCCAGTTGGAATTGCAGTGGAGAACATCTTAGAACTCACGGGCTGAAATCTTGTAAAGTTTCTTGTTTAGAATGCTTTCTACACTTGTATGTATCATTTGGCAGACATATCTTACCTTCTGAATTATTCCACTTTTAAAACTATGCTTTTCATTGTTTCCCCCAGATTCTCACTGGTTGGTATATATGATTATGAACAGAAACCAGGAAGCCTGAACTAATTATGGAATTGGTATTCTGTATGAGAATCGATGAATTTGTGTTAAAAA]

[+] EMBL CB637033             [GTGCGCGCTGCAACGCATCCTCTCCTCTCCTAGATCCCATCCGCATCTTCTTCCTCGTTTGACATTGCCCCTGTTGCTTGCTTCACGTCTCCTCTTCATGTGATCTGAGGCGCTCGCTTTCGGATTCTTGCTCTTCTCGGCGGCTCGCGTTGGGGGAGCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK064509             [                                                                       TGTTGCTTGCTTCACGTCTCCTCTTCATGTGATCTGAGGCGCTCGCTTTCGGATTCTTGCTCTTCTCGGCGGCTCGCGTTGGGGGAGCGGTGGTGGGGAGGAGATGGGGTTTTTCCGCACTGTGCTGGGTTTCTTCGGGTTTGGGGTGGGAGTTACCATGGGGCTTGTGATTGGGTACTACCTCTTCATCTACTTCCAGCCCACCGACGTCAAGGACCCTGTAATCAGGCCACTTGTTGAACTTGATACAAAATCTCTAGAAAGCATGCTTCCTGAGGTTCCTCATTGGGTGAAGAATCCAGACTTTGACCGGATTGATTGGCTTAACAAGTTTGTCGAAAACATTTGGCCTTATCTTGACAAGGCAATATGTAAAACTGCAAAGGAAATCGCTAAGCCAATTATTGCTGAGAACACTGCCAAGTATAAGATTGATTCGGTTGAATTTGAGACATTAACATTAGGTTCATTACCACCAACATTTCAAGGGATGAAGGTCTACACCACAGATGAGCAAGAACTTATAATGGAACCTTCCATCAAGTGGGCTGGAAATCCGAATATCACTGTTGTTGTCAAAGCATTTGGGCTAAAAGCAACTGCACAGGTTATTGATTTGCATGTTTTTGCTCTACCACGCATAACGTTGAAGCCCTTGGTGCCTAGCTTTCCTTGTTTTGCTAAAATAGTTGTTTCACTTATGGAGAAGCCACATGTTGATTTTGGTCTGAAACTCTTAGGAGCAGATCTCATGGCAATTCCAGGTCTCTATGTATTTGTTCAGGAGATTATCAAGACTCAGGTAGCAAACATGTACTTGTGGCCAAAAGTACTTGAGGTGCCAATCATGGATCCAGCAAAAGCACAAAAGAAGCCTGTTGGAATTTTGCATGTTAACATCGTACGGGCTGTCAAACTCACCAAAAAGGATTTTCTGGGAAAATCGGATCCATATGTGAAGTTAAAGCTAACAGAGGAAAAACTCCCATCAAAGAAAACGTCAGT GAAGCGAAGCAACTTGAACCCTGAATGGAATGAAGATTTCAAATTAGTTGTCAAAGACCCAGAATCTCAGGCTCTTGAGCTTACTGTTTACGATTGGGAGCAGGTTGGGAAGCACGACAAGATTGGAATGAGTGTTATCCCATTGAAAGAGCTTATTCCTGATGAGGCAAAGTCACTTACACTTGATTTACACAAGACTATGGATGCTAATGACCCAGCAAATGA CAAGTTCCGGGGGCAGCTCACTGTTGATGTAACATATAAGCCTTTCAAGGAAGGTGATTCTGATGTTGATACAAGTGATGAATCTGGCTCCA TTGAAAAAGCCCCTGATGGCACACCGGAA GGTGGTGGTTTGCTGGTAGTTATCGTTCATGAAGCACAAGACGTTGAAGGAAAGCACCACACTAATCCATATGTAAG AATTGTGTTTAGAGGTGAAGAAAGGAAGACCAAGCATATTAAGAAGAATCGTGATCCACGTTGGGAGCAAGAATTTCAGTTTGTCTGCGAGGAACCACCCATAAATGATAAAATGCAAATTGAAGTCATTAGCAGACCACCAAGCATCGGTATACATTCCAAGGAAAATCTTGGCTATGTTGTCATAAGTCTTGCAGATGTTATAAACAATAAGAGGATCAATGAGAAATATCATCTAATTGACTCGAAAAATGGCCGCATCCAGTTGGAATTGCAGTGGAGAACATCTTAGAACTCACGGGCTGAAATCTTGTAAAGTTTCTTGTTTAGAATGCTTTCTACACTTGTATGTATCATTTGGCAGACATATCTTACCTTCTGAATTATTCCACTTTTAAAACTATGCTTTTCATTGTTTCCCCCAGATTCTCACTGGTTGGTATATATGATTATGAACAGAAACCAGGAAGCCTGAACTAATTATGGAATTGGTAT                                 ]
[+] EMBL CF326078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGTACTTGAGGTGCCAATCATGGATCCAGCAAAAGCACAAAAGAAGCCTGTTGGAATTTTGCATGTTAACATCGTACGGGCTGTCAAACTCACCAAAAAGGATTTTCTGGGAAAATCGGATCCATATGTGAAGTTAAAGCTAACAGAGGAAAAACTCCCATCAAAGAAAACGTCAGT GAAGCGAAGCAACTTGAACCCTGAATGGAATGAAGATTTCAAATTAGTTGTCAAAGACCCAGAATCTCAGGCTCTTGAGCTTACTGTTTACGATTGGGAGCAGGTTGGGAAGCACGACAAGATTGGAATGAGTGTTATCCCATTGAAAGAGCTTATTCCTGATGAGGCAAAGTCACTTACACTTGACTTACACAAGACTATGGATGCTAATGACCCAGCAAATGA CAAGTTCCGGGGGCAGCTCACTGTTGATGTAACATATAAGCCTTTCAAGGAAGGTGATTCTGATGTTGATACAAGTGATGAATCTGGCACCA TTGAAAAAGCCCCTGATGGCACACCGGAAGGGTGGTGGTTTGCTGGTAGTTATCGTTCATGAAGCACAAGACGTTGAAGGAAAGCACCACACTAATCCATATGTAAGAAATTGTGTTTAGAGGTGAAGAAAGGAAGACCAAGCATATTAAGAAGAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSC102211            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCAGTAGATGCGAAGAAGNTTGAACCCTGAATGGAATGAAGATTTCAAATTAGTTGTCAAAGACCCAGAATCTCAGGCTCTTGAGCTTACTGTTTACGATTGGGAGCAGGTTGGGAAGCACGACAAGATTGGAATNAGTGTTATCCCATTGAAAGAGCTTATTCCTGATGAGGCAAAGTCACTTACACTTGACTTACACAAGACTATGGATGCTAATGACCCAGCAAATGA CAAGTTCCGGGGGCAGNTCACTGTTGATGTAACATATAAGCCTTTCAAGGAAGGTGATTCTGATGTTGATACAAGTGATGAATCTGGCACCATTTGAAAAAGCCCCTGATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB000316             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      acccccttTGGAATGAAGATTTCAAATTAGTTGTCAAAGACCCAGCTTTTCAGGCTCTTGAGCTTACTGTTTACGATTGGGAGCAGGTTGGGAAGCACGACAAGATTGGAATGAGTGTTATCCCATTGAAAGAGCTTATTCCTGATGAGGCAAAGTCACTTACACTTGACTTACACAAGACTATGGATGCTAATGACCCAGCAAATGA CAAGTTCCGGGGGCAGCTCACTGTTGATGTAACATATAAGCCTTTCAAGGAAGGTGATTCTGATGTTGATACAAGTGATGAATCTGGCACCA TTGAAAAAGCCCCTGATGGCACACCGGAA GGTGGTGGTTTGCTGGTAGTTATCGTTCATGAAGCACAAGACGTTGAAGGAAAGCACCACACTAATCCATATGTAAG AATTGTGTTTAGAGGTGAAGAAAGGAAGACCAAGCATATTAAGAAGAATCGTGATCCACGTTGGGAGCAAGAATTTCAGTTTGTCTGCGAGGAACCACCCATAAATGATAAAATGCAAATTGAAGTCATTAGCAGACCACCAAGCATCGGTATACATTCCAAGGAAAATCTTGGCTATGTTGTCATAAGTCTTGCAGATGTTATAAACAATAAGAGGATCAATGAGAAATATCATCTAATTGACTCGAAAAATGGCCGCATCCAGTTGGAATTGCAGTGGAGAACATCTTAGAACTCACGGGCTGAAATCTTGTAAAGTTTCTTGTTTAGAATGCTTTCTACACTTGTATGTATCATTTGGCAGACATATCTTACCTT                                                                                                                                                      ]
[+] EMBL AU100617             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCAGCAAATGACCAAGTTCCGGGGNCAGCTCACTGTTGATGTAACATATAAGCCTTTCAAGGAAGGTGATTCTGATGTTGATACAAGTGATGAATCTGGCACCA TTGAAAAAGCCCCTGATGGCACACCGGAA GGTGGTGGTTTGCTGGTAGTTATCGTTCATGAAGCACAAGACGTTGAAGGAAAGCACCACACTAATCCATATGTAAG AATTGTGTTTAGAGGTGAAGAAAGGAAGACCAAGCATATTAAGAAGAATCGTGATCCACGTTGGGAGCAAGAATTTCAGTTTGTCTGCGAGGAACCACCCATAAATGATAAAATGCAAATTGAAGTCATTAGCAGACCACCAAGCATCGGTATACATTCCAAGGAAAATCTTGGCTATGTTGTCATAAGTCTTGCAGATGTTATAAACAATAAGAGGATCAATGAGAAATATCATCTAATTGACTCGAAAAATGGCCGCATCCAGTTGGAATTGCAGTGGAGAACATCTTAGAACTCACGGGCTGAAATCTTGTAAAGTTTCTTGTTTAGAATGCTTTCTACACTTGTATGTATCATTTGGCAGACATATCTTACCTTCTGAATTATTCCACTTTTAAAACTATGCTTTTCATTGTTTCCCCCAGATTCTCACTGGTTGGTATATATGATTATGAACAGAAACCAGGAAGCCTGAACTAAaaaa                                            ]
[-] EMBL CB637034             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GATTCTGATGTTGATACAAGTGATGAATCTGGCACCA TTGAAAAAGCCCCTGATGGCACACCGGAA GGTGGTGGTTTGCTGGTAGTTATCGTTCATGAAGCACAAGACGTTGAAGGAAAGCACCACACTAATCCATATGTAAG AATTGTGTTTAGAGGTGAAGAAAGGAAGACCAAGCATATTAAGAAGAATCGTGATCCACGTTGGGAGCAAGAATTTCAGTTTGTCTGCGAGGAACCACCCATAAATGATAAAATGCAAATTGAAGTCATTAGCAGACCACCAAGCATCGGTATACATTCCAAGGAAAATCTTGGCTATGTTGTCATAAGTCTTGCAGATGTTATAAACAATAAGAGGATCAATGAGAAATATCATCTAATTGACTCGAAAAATGGCCGCATCCAGTTGGAATTGCAGTGGAGAACATCTTAGAACTCACGGGCTGAAATCTTGTAAAGTTTCTTGTTTAGAAAGCTTTCTACACTTGTATGTATCATTTGGCAGACATATCTTACCTTCTGAATTATTCCACTTTTAAAACTATGCTTTTCATTGTTTCCCCCAGATTCTCACTGGTTGGTATATATGATTATGAACAGAAACCAGGAAGCCTGAACTAATTATGGAATTG                                     ]
[+] EMBL AU096229             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATATTAAGAAGAATCGTGATCCACGTTGGGAGCAAGAATTTCAGTTTGTCTGCGAGGAACCACCCATAAATGATAAAATGCAAATTGAAGTCATTAGCAGACCACCAAGCATCGGTATACATTCCAAGGAAAATCTTGGCTATGTTGTCATAAGTCTTGCAGATGTTATAAACAATAAGAGGATCAATGAGAAATATCATCTAATTGACTCGAAAAATGGCCGCATCCAGTTGGAATTGCAGTGGAGAACATCTTAGAACTCACGGGCTGAAATCTTGTAAAGTTTCTTGTTTAGAATGCTTTCTACACTTGTATGTATCATTTGGCAGACATATCTTACCTTCTGAATTATTCCACTTTTAAAACTATGCTTTTCATTGTTTCCCCCAGATTCTCACTGGTTGGTATATATGATTATGAACAGAAACCAGGAAGCCTGAACTAATTATGGAATTGGTATTCTGTATGAGAATCGATGAATTTGTGTTAAAAA]


>consensus_11821#0 GTGCGCGCTGCAACGCATCCTCTCCTCTCCTAGATCCCATCCGCATCTTCTTCCTCGTTT GACATTGCCCCTGTTGCTTGCTTCACGTCTCCTCTTCATGTGATCTGAGGCGCTCGCTTT CGGATTCTTGCTCTTCTCGGCGGCTCGCGTTGGGGGAGCGGTGGTGGGGAGGAGATGGGG TTTTTCCGCACTGTGCTGGGTTTCTTCGGGTTTGGGGTGGGAGTTACCATGGGGCTTGTG ATTGGGTACTACCTCTTCATCTACTTCCAGCCCACCGACGTCAAGGACCCTGTAATCAGG CCACTTGTTGAACTTGATACAAAATCTCTAGAAAGCATGCTTCCTGAGGTTCCTCATTGG GTGAAGAATCCAGACTTTGACCGGATTGATTGGCTTAACAAGTTTGTCGAAAACATTTGG CCTTATCTTGACAAGGCAATATGTAAAACTGCAAAGGAAATCGCTAAGCCAATTATTGCT GAGAACACTGCCAAGTATAAGATTGATTCGGTTGAATTTGAGACATTAACATTAGGTTCA TTACCACCAACATTTCAAGGGATGAAGGTCTACACCACAGATGAGCAAGAACTTATAATG GAACCTTCCATCAAGTGGGCTGGAAATCCGAATATCACTGTTGTTGTCAAAGCATTTGGG CTAAAAGCAACTGCACAGGTTATTGATTTGCATGTTTTTGCTCTACCACGCATAACGTTG AAGCCCTTGGTGCCTAGCTTTCCTTGTTTTGCTAAAATAGTTGTTTCACTTATGGAGAAG CCACATGTTGATTTTGGTCTGAAACTCTTAGGAGCAGATCTCATGGCAATTCCAGGTCTC TATGTATTTGTTCAGGAGATTATCAAGACTCAGGTAGCAAACATGTACTTGTGGCCAAAA GTACTTGAGGTGCCAATCATGGATCCAGCAAAAGCACAAAAGAAGCCTGTTGGAATTTTG CATGTTAACATCGTACGGGCTGTCAAACTCACCAAAAAGGATTTTCTGGGAAAATCGGAT CCATATGTGAAGTTAAAGCTAACAGAGGAAAAACTCCCATCAAAGAAAACGTCAGTGAAG CGAAGCAACTTGAACCCTGAATGGAATGAAGATTTCAAATTAGTTGTCAAAGACCCAGAA TCTCAGGCTCTTGAGCTTACTGTTTACGATTGGGAGCAGGTTGGGAAGCACGACAAGATT GGAATGAGTGTTATCCCATTGAAAGAGCTTATTCCTGATGAGGCAAAGTCACTTACACTT GACTTACACAAGACTATGGATGCTAATGACCCAGCAAATGACAAGTTCCGGGGGCAGCTC ACTGTTGATGTAACATATAAGCCTTTCAAGGAAGGTGATTCTGATGTTGATACAAGTGAT GAATCTGGCACCATTGAAAAAGCCCCTGATGGCACACCGGAAGGTGGTGGTTTGCTGGTA GTTATCGTTCATGAAGCACAAGACGTTGAAGGAAAGCACCACACTAATCCATATGTAAGA ATTGTGTTTAGAGGTGAAGAAAGGAAGACCAAGCATATTAAGAAGAATCGTGATCCACGT TGGGAGCAAGAATTTCAGTTTGTCTGCGAGGAACCACCCATAAATGATAAAATGCAAATT GAAGTCATTAGCAGACCACCAAGCATCGGTATACATTCCAAGGAAAATCTTGGCTATGTT GTCATAAGTCTTGCAGATGTTATAAACAATAAGAGGATCAATGAGAAATATCATCTAATT GACTCGAAAAATGGCCGCATCCAGTTGGAATTGCAGTGGAGAACATCTTAGAACTCACGG GCTGAAATCTTGTAAAGTTTCTTGTTTAGAATGCTTTCTACACTTGTATGTATCATTTGG CAGACATATCTTACCTTCTGAATTATTCCACTTTTAAAACTATGCTTTTCATTGTTTCCC CCAGATTCTCACTGGTTGGTATATATGATTATGAACAGAAACCAGGAAGCCTGAACTAAT TATGGAATTGGTATTCTGTATGAGAATCGATGAATTTGTGTTAAAAA



consensusID : consensus_11821#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 319
fasta sequence
                              [ACATGAGAGAATAGTCATCTAAGTTGACCTCGAAAAATGGCCGCATCCAGTTGGAATTGTCAGTGGAGAACATCTTAGAACTGCACGGGGCTGGAAATGCTTGGTGAAAGTGTGTGCTTGGTTTGAGAATGCTGTGTGCTACACTTGTATGGTGATGCATTTGGCAGACATGATGCTTGACCTGTGCTGGAATTGATTGCCAACTGTGTTGAAAACTGATGGCTGTTGTGCATGGGGTGTTGCCCCCAGATTCTCACTGGTTGGTATATATGATTATGACAGAAACCAGGAAGCCTGAACTAATTATGGAAAAAAAAAA]

[+] EMBL BQ908396             [ACATGAGAGAATAGTCATCTAAGTTGACCTCGAAAAATGGCCGCATCCAGTTGGAATTGTCAGTGGAGAACATCTTAGAACTGCACGGGGCTGGAAATGCTTGGTGAAAGTGTGTGCTTGGTTTGAGAATGCTGTGTGCTACACTTGTATGGTGATGCATTTGGCAGACATGATGCTTGACCTGTGCTGGAATTGATTGCCAACTGTGTTGAAAACTGATGGCTGTTGTGCATGGGGTGTTGCCCCCAGATTCTCACTGGTTGGTATATATGATTATGACAGAAACCAGGAAGCCTGAACTAATTATGGAAAAAAAAAA]


>consensus_11821#1 ACATGAGAGAATAGTCATCTAAGTTGACCTCGAAAAATGGCCGCATCCAGTTGGAATTGT CAGTGGAGAACATCTTAGAACTGCACGGGGCTGGAAATGCTTGGTGAAAGTGTGTGCTTG GTTTGAGAATGCTGTGTGCTACACTTGTATGGTGATGCATTTGGCAGACATGATGCTTGA CCTGTGCTGGAATTGATTGCCAACTGTGTTGAAAACTGATGGCTGTTGTGCATGGGGTGT TGCCCCCAGATTCTCACTGGTTGGTATATATGATTATGACAGAAACCAGGAAGCCTGAAC TAATTATGGAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11821#0      GTGCGCGCTGCAACGCATCCTCTCCTCTCCTAGATCCCATCCGCATCTTCTTCCTCGTTT 60
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GACATTGCCCCTGTTGCTTGCTTCACGTCTCCTCTTCATGTGATCTGAGGCGCTCGCTTT 120
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      CGGATTCTTGCTCTTCTCGGCGGCTCGCGTTGGGGGAGCGGTGGTGGGGAGGAGATGGGG 180
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      TTTTTCCGCACTGTGCTGGGTTTCTTCGGGTTTGGGGTGGGAGTTACCATGGGGCTTGTG 240
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      ATTGGGTACTACCTCTTCATCTACTTCCAGCCCACCGACGTCAAGGACCCTGTAATCAGG 300
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      CCACTTGTTGAACTTGATACAAAATCTCTAGAAAGCATGCTTCCTGAGGTTCCTCATTGG 360
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GTGAAGAATCCAGACTTTGACCGGATTGATTGGCTTAACAAGTTTGTCGAAAACATTTGG 420
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      CCTTATCTTGACAAGGCAATATGTAAAACTGCAAAGGAAATCGCTAAGCCAATTATTGCT 480
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GAGAACACTGCCAAGTATAAGATTGATTCGGTTGAATTTGAGACATTAACATTAGGTTCA 540
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      TTACCACCAACATTTCAAGGGATGAAGGTCTACACCACAGATGAGCAAGAACTTATAATG 600
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GAACCTTCCATCAAGTGGGCTGGAAATCCGAATATCACTGTTGTTGTCAAAGCATTTGGG 660
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      CTAAAAGCAACTGCACAGGTTATTGATTTGCATGTTTTTGCTCTACCACGCATAACGTTG 720
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      AAGCCCTTGGTGCCTAGCTTTCCTTGTTTTGCTAAAATAGTTGTTTCACTTATGGAGAAG 780
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      CCACATGTTGATTTTGGTCTGAAACTCTTAGGAGCAGATCTCATGGCAATTCCAGGTCTC 840
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      TATGTATTTGTTCAGGAGATTATCAAGACTCAGGTAGCAAACATGTACTTGTGGCCAAAA 900
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GTACTTGAGGTGCCAATCATGGATCCAGCAAAAGCACAAAAGAAGCCTGTTGGAATTTTG 960
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      CATGTTAACATCGTACGGGCTGTCAAACTCACCAAAAAGGATTTTCTGGGAAAATCGGAT 1020
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      CCATATGTGAAGTTAAAGCTAACAGAGGAAAAACTCCCATCAAAGAAAACGTCAGTGAAG 1080
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      CGAAGCAACTTGAACCCTGAATGGAATGAAGATTTCAAATTAGTTGTCAAAGACCCAGAA 1140
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      TCTCAGGCTCTTGAGCTTACTGTTTACGATTGGGAGCAGGTTGGGAAGCACGACAAGATT 1200
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GGAATGAGTGTTATCCCATTGAAAGAGCTTATTCCTGATGAGGCAAAGTCACTTACACTT 1260
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GACTTACACAAGACTATGGATGCTAATGACCCAGCAAATGACAAGTTCCGGGGGCAGCTC 1320
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      ACTGTTGATGTAACATATAAGCCTTTCAAGGAAGGTGATTCTGATGTTGATACAAGTGAT 1380
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GAATCTGGCACCATTGAAAAAGCCCCTGATGGCACACCGGAAGGTGGTGGTTTGCTGGTA 1440
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GTTATCGTTCATGAAGCACAAGACGTTGAAGGAAAGCACCACACTAATCCATATGTAAGA 1500
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      ATTGTGTTTAGAGGTGAAGAAAGGAAGACCAAGCATATTAAGAAGAATCGTGATCCACGT 1560
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      TGGGAGCAAGAATTTCAGTTTGTCTGCGAGGAACCACCCATAAATGATAAAATGCAAATT 1620
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GAAGTCATTAGCAGACCACCAAGCATCGGTATACATTCCAAGGAAAATCTTGGCTATGTT 1680
consensus_11821#1      ------------------------------------------------------------
                                                                                   

consensus_11821#0      GTCATAAGTCTTGCAGATGTTATAAACAATAAGAGGATCAATGAGAAATATCATCTAA-T 1739
consensus_11821#1      ------------------------------------ACATGAGAGAATAGTCATCTAAGT 24
                                                           *     *****   ******** *

consensus_11821#0      TGAC-TCGAAAAATGGCCGCATCCAGTTGGAATTG-CAGTGGAGAACATCTTAGAACT-C 1796
consensus_11821#1      TGACCTCGAAAAATGGCCGCATCCAGTTGGAATTGTCAGTGGAGAACATCTTAGAACTGC 84
                       **** ****************************** ********************** *

consensus_11821#0      ACGGG-CTGAAA---TCTTGTAAAGTTTCTTGTTT------AGAATGCTTT---CTACAC 1843
consensus_11821#1      ACGGGGCTGGAAATGCTTGGTGAAAGTGTGTGCTTGGTTTGAGAATGCTGTGTGCTACAC 144
                       ***** *** **     * ** **  *   ** **      ******** *   ******

consensus_11821#0      TTGTATGT--AT-CATTTGGCAGACATAT--CTTACCTTCTG----AATTATT------C 1888
consensus_11821#1      TTGTATGGTGATGCATTTGGCAGACATGATGCTTGACCTGTGCTGGAATTGATTGCCAAC 204
                       *******   ** **************    ***  * * **    ****  *      *

consensus_11821#0      CACTTTTAAAACTA-----TGCTTTTCAT----TGTTTCCCCCAGATTCTCACTGGTTGG 1939
consensus_11821#1      TGTGTTGAAAACTGATGGCTGTTGTGCATGGGGTGTTGCCCCCAGATTCTCACTGGTTGG 264
                           ** ******      ** * * ***    **** **********************

consensus_11821#0      TATATATGATTATGAACAGAAACCAGGAAGCCTGAACTAATTATGGAATTGGTATTCTGT 1999
consensus_11821#1      TATATATGATTATGA-CAGAAACCAGGAAGCCTGAACTAATTATGGAAAAAAAAAA---- 319
                       *************** ********************************     *      

consensus_11821#0      ATGAGAATCGATGAATTTGTGTTAAAAA 2027
consensus_11821#1      ----------------------------
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)