cluster # 11823

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Oryza sativa
cluster # 11823 cluster # 11823 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11823#0 length = 1648 sequences # 7

consensus_11823#1 length = 1452 sequences # 2

consensusID : consensus_11823#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1648
fasta sequence

                              [TGGTCTACTACTACCCCGCGCCCTCGCCGCCGCCGGCGGATGCGGGGCGGAGGCGGAGCGGAGCGGAGGGGTTCTTCGCACCGG-AGAGGCTGCGGGAGGCGCTGGCGAGGGCGCTGGTGCCGTTCTACCCGCTGGCGGGGCGGCTGGCGGCGGGGCCCGGCGGCCGGCTCGAGATCGACTGCAACGGCGAGGGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGAGATGTTCACCGACTTCGAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTT-CGCCGCCTCCGGCGAGCCCCCCTGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGGCGTGGCCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCCGGACGTGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGTCGCACGACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGGTGTACTCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCGTCCCGCCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACGGCGCGGTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACGCCGAGTCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGTCGCCCTACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCCTGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACGACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGGCGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGCCCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGTTCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCGGCGTGTCCGTGCTGTTCGCGCTCGAACCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCTACGGCACAGAGTGATATGATGCGGCGGCGGCGGCGGTGGCCGGAGTTTAGAGCTGGAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGGTGTCGACGTCTGCTGACTCTGTGTCATGCTCAATACATAACATAATATGCGTTATTTGATTTGCGGTAGAAGTATTTAGTGTATGCTGGTACTGTGCAACAGTGCAAGTGTAATGAGCTGCTGCCTTGTTGGTTGCAGCTCTCTCTACACAGACACTTTGGTCTGTCTTAAGTTCGTATGTACAAAAAAAAAATCAAATGGAAATGAAAATGACTATGGAAGCAAAGAAAGTTCGCAAGCAAACGGTTGGTTATTTGTAGAATAAGCGAAACAGCATATTTGCAAATGAAAAATAATTTGTGAACAAAACTTTTATATACGTGTTCTTAGCGATTTAACTTTAAAAAAAA]

[-] EMBL BU667217             [TGGTCTACTACTACCCCGCGCCCTCGCCGCCGCCGGCGGATGCGGGGCGGAGGCGGAGCGGAGCGGAGGGGTTCTTCGCACCGGTAGAGGCTGCGGGAGGCGCTGGCGAGGGCGCTGGTGCCGTTCTACCCGCTGGC GGGCGGCTGGCGGCGGGGCCCGGCGGCCGGCTCGAGATCGACTGCAACGGCGAGGGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGAGATGTTCACCGACTTCGAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTT CGCCGCCTCCGGCGAGCCCCCCTGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGGCGT GCCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCCGGACGTGGACGGGGCTGTCGCGTGGGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK101900             [                                                                             GCACCGG AGAGGCTGCGGGAGGCGCTGGCGAGGGCGCTGGTGCCGTTCTACCCGCTGGCGGGGCGGCTGGCGGCGGGGCCCGGCGGCCGGCTCGAGATCGACTGCAACGGCGAGGGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGAGATGTTCACCGACTTCGAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTT CGCCGCCTCCGGCGAGCCCCCCTGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGGCGTGGCCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCCGGACGTGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGTCGCACGACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGGTGTACTCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCGTCCCGCCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACGGCGCGGTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACGCCGAGTCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGTCGCCCTACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCCTGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACGACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGGCGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGCCCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGTTCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCGGCGTGTCCGTGCTGTTCGCGCTCGAACCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCTACGGCACAGAGTGATATGATGCGGCGGCGGCGGCGGTGGCCGGAGTTTAGAGCTGGAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGGTGTCGACGTCTGCTGACTCTGTGTCATGCTCAATACATAACATAATATGCGTTATTTGATTTGCGGTAGAAGTATTTAGTGTATGCTGGTACTGTGCAACAGTGCAAGTGTAATGAGCTGCTGCCTTGTTGGTTGCAGCTCTCTCTACACAGACACTTTGGTCTGTCTTAAGTTCGTATGTACAAAAAAAAAATCAAATGGAAATGAAAATGA                                                                                                                                         ]
[+] EMBL AK058559             [                                                                             GCACCGG AGAGGCTGCGGGAGGCGCTGGCGAGGGCGCTGGTGCCGTTCTACCCGCTGGCGGGGCGGCTGGCGGCGGGGCCCGGCGGCCGGCTCGAGATCGACTGCAACGGCGAGGGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGAGATGTTCACCGACTTCGAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTT CGCCGCCTCCGGCGAGCCCCCCTGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGGCGTGGCCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCCGGACGTGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGTCGCACGACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGGTGTACCCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCGTCCCGCCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACGGCGCGGTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACGCCGAGTCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGTCGCCCTACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCCTGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACGACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGGCGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGCCCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGTTCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCGGCGTGTCCGTGCTGTTCGCGCTCGAACCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCTACGGCACAGAGTGATATGATGCGGCGGCGGCGGCGGTGGCCGGAGTTTAGAGCTGGAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGGTGTCGACGTCTGCTGACTCTGTGTCATGCTCAATACATAACATAATATGCGTTATTTGATTTGCGGTAGAAGTATTTAGTGTATGCTGGTACTGTGCAACAGTGCAAGTGTAATGAGCTGCTGCCTTGTTGGTTGCAGCTCTCTCTACACAGACACTTTGGTCTGTCTTAAGTTCGTATGTACAAAAAAAAAATCAAATGGAAATGAAAATGA                                                                                                                                         ]
[-] EMBL AU176473             [                                                                                                                                             CGGCTGGCGGCGGGGCCCGGCGGCCGGCTCGAGATCGACTGCAACGGCGAGGGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGAGATGTTCACCGACTTCGAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTT CGCCGCCTCCGGCGAGCCCCCCTGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGGCGTGGCCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU097538             [                                                                                                                                                                                           GCGAGGGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGAGATGTTCACCGACTTCGAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTTGCGAC CCTCCGGCGAGCCCCCCTGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGGCGTGGCCGTCGGCNCGGGCATGNACNATGTCNCGNTGGNCGGCGCGGGCTCGTTCTAGTTTATCCGGtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB658802             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGTGCCCGTCCGCGACATCCTGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACGACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGGCGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGCCCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGTTCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCGGCGTGTCCGTGCTGTTCGCGCTCGAACCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCTACGGCACAGAGTGATATGATGCGGCGGCGGCGGCGGTGGCCGGAGTTTAGAGCTGGAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGGTGTCGACGTCTGCTGACTCTGTGTCATGCTCAATACATAACATAATATGCGTTATTTGATTTGCGGTAGAAGTATTTAGTGTATGCTGGTACTGTGCAACAGTGCAAGTGTAATGAGCTGCTGCCTTGTTGGTTGCAGCTCTCTCTACACAGACACTTTGGTCTGTCTTAAGTTCGTATGTACAAAAAAGAAATCAAATGGAAATGAAAATGAC                                                                                                                                        ]
[+] EMBL CF326601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTGGCCGGAGTTTAGAGCTGGAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGGTGTCGACGTCTGCTGACTCTGTGTCATGCTCAATACATAACATAATATGCGTTATTTGATTTGCGGTAGAAGTATTTAGTGTATGCTGGTACTGTGCAACAGTGCAAGTGTAATGAGCTGCTGCCTTGTTGGTTGCAGCTCTCTCTACACAGACACTTTGGTCTGTCTTAAGTTCGTATGTACAAAAAAAAAATCAAATGGAAATGAAAATGACTATGGAAGCAAAGAAAGTTCGCAAGCAAACGGTTGGTTATTTGTAGAATAAGCGAAACAGCATATTTGCAAATGAAAAATAATTTGTGAACAAAACTTTTATATACGTGTTCTTAGCGATTTAACTTTAAAAAAAA]




>consensus_11823#0
TGGTCTACTACTACCCCGCGCCCTCGCCGCCGCCGGCGGATGCGGGGCGGAGGCGGAGCG
GAGCGGAGGGGTTCTTCGCACCGGAGAGGCTGCGGGAGGCGCTGGCGAGGGCGCTGGTGC
CGTTCTACCCGCTGGCGGGGCGGCTGGCGGCGGGGCCCGGCGGCCGGCTCGAGATCGACT
GCAACGGCGAGGGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGAGATGT
TCACCGACTTCGAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTTCGCCGCCTCCG
GCGAGCCCCCCTGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGGCGTGG
CCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCC
GGACGTGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGT
CGCACGACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGG
TGTACTCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCG
TCCCGCCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACG
GCGCGGTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACG
CCGAGTCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGT
CGCCCTACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCC
TGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACG
ACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGG
CGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGC
CCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGT
TCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCG
GCGTGTCCGTGCTGTTCGCGCTCGAACCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCT
ACGGCACAGAGTGATATGATGCGGCGGCGGCGGCGGTGGCCGGAGTTTAGAGCTGGAGGA
CATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGGTGTCGACGTCTGCTGACTCTGT
GTCATGCTCAATACATAACATAATATGCGTTATTTGATTTGCGGTAGAAGTATTTAGTGT
ATGCTGGTACTGTGCAACAGTGCAAGTGTAATGAGCTGCTGCCTTGTTGGTTGCAGCTCT
CTCTACACAGACACTTTGGTCTGTCTTAAGTTCGTATGTACAAAAAAAAAATCAAATGGA
AATGAAAATGACTATGGAAGCAAAGAAAGTTCGCAAGCAAACGGTTGGTTATTTGTAGAA
TAAGCGAAACAGCATATTTGCAAATGAAAAATAATTTGTGAACAAAACTTTTATATACGT
GTTCTTAGCGATTTAACTTTAAAAAAAA

consensusID : consensus_11823#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1452
fasta sequence

                              [TCTGCGTGACATCACTAGATTATAGTACAGTAGAAAAGTTTCAGAACTGGGCGGCTGCTTGATGGAGCAGAGGAAATTTGGCACTCTGAAAGATAAAATTTTAATATCAAAGTCAAACAATTGATGCACGTAACAATTTAGCATGAATTTTTATATCGTATCAGGATCTGCTGATTCAAAAAATTGAAAAACTTTGGATTGATGCAGGTGACGTTCCTGAAGTGTGGAGGCGTGGCCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCCGGACGTGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGTCGCACGACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGGTGTACTCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCGTCCCGCCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACGGCGCGGTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACGCCGAGTCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGTCGCCCTACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCCTGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACGACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGGCGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGCCCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGTCCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCGGCGTGTCCGTGCTGTNCGCGCTCGAGCCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCTACGGCACAGAGTGATATGATGCCGGCGGCGCNGCNGCGGCGGTGGGCGGAGTTTAGAGCCTGGAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGCTGTCNACGTCTGCTGACTCTGTGTCATGCCCCACTACTTCCCTAATATGCGTTATTCTGATTGCCGTAAAGGTATCACTGTATGNGGGTACCGGTGCAACGTGGCANTGTTATANCCTGCTGCCTGCTTGGTAGCCCTTTCTCTCCCCGACACCTTGGTCGTTCTAAGTCGGATTCACAAAAAANTNAAATGAAGGANNNTACTTTGGCCCAACANACANCNGNNGTCACACGCTCCTTCNNNAAANACCACGGGGCCGTCCCTCTCCCTTT]

[+] EMBL CB658801             [TCTGCGTGACATCACTAGATTATAGTACAGTAGAAAAGTTTCAGAACTGGGCGGCTGCTTGATGGAGCAGAGGAAATTTGGCACTCTGAAAGATAAAATTTTAATATCAAAGTCAAACAATTGATGCACGTAACAATTTAGCATGAATTTTTATATCGTATCAGGATCTGCTGATTCAAAAAATTGAAAAACTTTGGATTGATGCAGGTGACGTTCCTGAAGTGTGGAGGCGTGGCCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCCGGACGTGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGTCGCACGACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGGTGTACTCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCGTCCCGCCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACGGCGCGGTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACGCCGAGTCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGTCGCCCTACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCCTGTCGCAGCCGCTGGGGTTCGTGGCGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA753005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCGTCCGCGACATCCTGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACGACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGGCGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGCCCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGTCCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCGGCGTGTCCGTGCTGTNCGCGCTCGAGCCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCTACGGCACAGAGTGATATGATGCCGGCGGCGCNGCNGCGGCGGTGGGCGGAGTTTAGAGCCTGGAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGCTGTCNACGTCTGCTGACTCTGTGTCATGCCCCACTACTTCCCTAATATGCGTTATTCTGATTGCCGTAAAGGTATCACTGTATGNGGGTACCGGTGCAACGTGGCANTGTTATANCCTGCTGCCTGCTTGGTAGCCCTTTCTCTCCCCGACACCTTGGTCGTTCTAAGTCGGATTCACAAAAAANTNAAATGAAGGANNNTACTTTGGCCCAACANACANCNGNNGTCACACGCTCCTTCNNNAAANACCACGGGGCCGTCCCTCTCCCTTT]




>consensus_11823#1
TCTGCGTGACATCACTAGATTATAGTACAGTAGAAAAGTTTCAGAACTGGGCGGCTGCTT
GATGGAGCAGAGGAAATTTGGCACTCTGAAAGATAAAATTTTAATATCAAAGTCAAACAA
TTGATGCACGTAACAATTTAGCATGAATTTTTATATCGTATCAGGATCTGCTGATTCAAA
AAATTGAAAAACTTTGGATTGATGCAGGTGACGTTCCTGAAGTGTGGAGGCGTGGCCGTC
GGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCCGGACG
TGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGTCGCAC
GACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGGTGTAC
TCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCGTCCCG
CCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACGGCGCG
GTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACGCCGAG
TCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGTCGCCC
TACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCCTGTCG
CAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACGACGCG
TTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGGCGGCG
CGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGCCCATC
TACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGTCCGGC
AGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCGGCGTG
TCCGTGCTGTNCGCGCTCGAGCCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCTACGGC
ACAGAGTGATATGATGCCGGCGGCGCNGCNGCGGCGGTGGGCGGAGTTTAGAGCCTGGAG
GACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGCTGTCNACGTCTGCTGACTCT
GTGTCATGCCCCACTACTTCCCTAATATGCGTTATTCTGATTGCCGTAAAGGTATCACTG
TATGNGGGTACCGGTGCAACGTGGCANTGTTATANCCTGCTGCCTGCTTGGTAGCCCTTT
CTCTCCCCGACACCTTGGTCGTTCTAAGTCGGATTCACAAAAAANTNAAATGAAGGANNN
TACTTTGGCCCAACANACANCNGNNGTCACACGCTCCTTCNNNAAANACCACGGGGCCGT
CCCTCTCCCTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11823#0      TGGTCTACTACTACCCCGCGCCCTCGCCGCCGCCGGCGGATGCGGGGCGGAGGCGGAGCG 60
consensus_11823#1      ------------------------------------------------------------
                                                                                   

consensus_11823#0      GAGCGGAGGGGTTCTTCGCACCGGAGAGGCTGCGGGAGGCGCTGGCGAGGGCGCTGGTGC 120
consensus_11823#1      -----------------------------------------------------TCTGCGT 7
                                                                               * * 

consensus_11823#0      CGTTCTACCCGCTGGCGGGGCGGCTGGCGGCGGGGCCCGGCGGCCGGCTCGAGATCGACT 180
consensus_11823#1      GACATCACTAGATTATAGTACAGTAGA----AAAGTTTCAGAACTGGGCGGCTGCTTGAT 63
                             **  * *    *  * *  *        *        * **   *        *

consensus_11823#0      GCAACGGCGAGGGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGAGATGT 240
consensus_11823#1      GGAGCAGAGGAAATTTGGCACTCTGAAAGATAAAATTTTAAT--ATCAAAGTCAAACAAT 121
                       * * * * *       *    **         *      * *  * *   * * *    *

consensus_11823#0      TCACCGACTTCGAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTTCGCCGCCTCCG 300
consensus_11823#1      TGATGCACGTAACAATTTAGCATGAATTTTTATATCGTATCAGGATCT--GCTGATTCAA 179
                       * *   ** *       *  *  **          *   **     **  ** *  **  

consensus_11823#0      GCGAGCCCCCCTGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGGCGTGG 360
consensus_11823#1      AAAA----TTGAAAAACTTTGGATTGATGCAGGTGACGTTCCTGAAGTGTGGAGGCGTGG 235
                          *            * * *   ** * *******************************

consensus_11823#0      CCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCC 420
consensus_11823#1      CCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCC 295
                       ************************************************************

consensus_11823#0      GGACGTGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGT 480
consensus_11823#1      GGACGTGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGT 355
                       ************************************************************

consensus_11823#0      CGCACGACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGG 540
consensus_11823#1      CGCACGACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGG 415
                       ************************************************************

consensus_11823#0      TGTACTCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCG 600
consensus_11823#1      TGTACTCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCG 475
                       ************************************************************

consensus_11823#0      TCCCGCCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACG 660
consensus_11823#1      TCCCGCCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACG 535
                       ************************************************************

consensus_11823#0      GCGCGGTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACG 720
consensus_11823#1      GCGCGGTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACG 595
                       ************************************************************

consensus_11823#0      CCGAGTCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGT 780
consensus_11823#1      CCGAGTCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGT 655
                       ************************************************************

consensus_11823#0      CGCCCTACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCC 840
consensus_11823#1      CGCCCTACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCC 715
                       ************************************************************

consensus_11823#0      TGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACG 900
consensus_11823#1      TGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACG 775
                       ************************************************************

consensus_11823#0      ACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGG 960
consensus_11823#1      ACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGG 835
                       ************************************************************

consensus_11823#0      CGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGC 1020
consensus_11823#1      CGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGC 895
                       ************************************************************

consensus_11823#0      CCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGT 1080
consensus_11823#1      CCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGT 955
                       ************************************************************

consensus_11823#0      TCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCG 1140
consensus_11823#1      CCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCG 1015
                        ***********************************************************

consensus_11823#0      GCGTGTCCGTGCTGTTCGCGCTCGAACCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCT 1200
consensus_11823#1      GCGTGTCCGTGCTGTNCGCGCTCGAGCCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCT 1075
                       *************** ********* **********************************

consensus_11823#0      ACGGCACAGAGTGATATGATGCGG------CGGCGGCGGCGGTGGCCGGAGTTTAGAGC- 1253
consensus_11823#1      ACGGCACAGAGTGATATGATGCCGGCGGCGCNGCNGCGGCGGTGGGCGGAGTTTAGAGCC 1135
                       ********************** *      * ** ********** ************* 

consensus_11823#0      TGGAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGGTGTCGACGTCTGCTG 1313
consensus_11823#1      TGGAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGCTGTCNACGTCTGCTG 1195
                       ******************************************** **** **********

consensus_11823#0      ACTCTGTGTCATGCTCAATACATAACATAATATGCGTTATTTGATTTGCGGTAGAAGTAT 1373
consensus_11823#1      ACTCTGTGTCATGCCCCACTACTTCCCTAATATGCGTTATTCTGATTGCCGTAAAGGTAT 1255
                       ************** * *    *  * **************    **** *** * ****

consensus_11823#0      TTAGTGTATGCTGGTACTG-TGCAACAGTGCAAGTGTAATGAGCTGCTGCCTTGTTGGTT 1432
consensus_11823#1      C-ACTGTATGNGGGTACCGGTGCAAC-GTGGCANTGTTATANCCTGCTGCCTGCTTGGTA 1313
                         * ******  ***** * ****** ***  * *** **   *********  ***** 

consensus_11823#0      GCAGCTCTCTCTACACAGACACTTTGGTCTGTCTTAAGTTCGTATGTACAAAAAAAAAAT 1492
consensus_11823#1      GCC-CTTTCTCTCCCC-GACACCTTGGTC-GTTCTAAGT-CGGATTCACAAAAA---ANT 1366
                       **  ** ***** * * ***** ****** **  ***** ** **  *******   * *

consensus_11823#0      CAAATGGAAATGAAAATGACTATGGAAGCAAAGAAAGTTCGCAAGCAAACGGTTGGTTAT 1552
consensus_11823#1      NAAATGAA---GGANNNTACTTTGGCC-CAACANACANCNGNNGTCACACGCT---CCTT 1419
                        ***** *   * *    *** ***   ***   *     *    ** *** *      *

consensus_11823#0      TTGTAGAATAAGCGAAACAGCATATTTGCAAATGAAAAATAATTTGTGAACAAAACTTTT 1612
consensus_11823#1      CNNNAAANACCACGGGGCCGTCCCTCTCCCTTT--------------------------- 1452
                           * *     **   * *    * * *   *                           

consensus_11823#0      ATATACGTGTTCTTAGCGATTTAACTTTAAAAAAAA 1648
consensus_11823#1      ------------------------------------