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Oryza sativa
cluster # 11825 cluster # 11825       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11825#0 length = 1804 sequences # 8  
consensus_11825#1 length = 337 sequences # 1  

consensusID : consensus_11825#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1804
fasta sequence
                              [ATCGATCGATCGATCTGTTGGCGCAGCGTGTATATAAGGGCGGGAAGGGGAGTGAGAGAGAGCAGCAGCTAGCTAGCCGCGGTCGGTCGATCCAGCTGCTGGGGATGAGTACTTAGTTAGCTCGGAGCTAGCTACTAATGGATGATATACTTATGCTAGTTAGTTAAATACAGTTATTAGTTAGTTGTAGGTTGCATCTATCATATCTCCATCGGTTAATTAATTGATTGATAGCTAGATTATCAACAATTAATGAGCATGGTGGTGCAGCAGGAGCAGGAGGTGGTGTTCGACGCGGCGGTGCTGAGCGGGCAGACGGAGATCCCGTCGCAGTTCATATGGCCGGCGGAGGAGAGCCCCGGGTCGGTGGCGGTGGAGGAGCTGGAGGTGGCGCTGATCGACGTGGGGGCGGGGGCGGAGAGGTCGTCGGTGGTCCGGCAGGTGGGGGAGGCGTGCGAGAGGCACGGCTTCTTCCTGGTGGTTAACCACGGCATCGAGGCGGCGCTGCTGGAGGAGGCGCACCGGTGCATGGACGCCTTCTTCACGCTGCCGCTGGGGGAGAAGCAGCGGGCGCAGCGGCGCGCGGGGGAGAGCTGCGGCTACGCCAGCAGCTTCACGGGGCGCTTCGCGTCCAAGCTGCCGTGGAAGGAGACGCTGTCGTTCCGGTACTCATCGGCTGGAGATGAAGAGGGCGAGGAGGGCGTGGGTGAGTACCTGGTGCGGAAGCTCGGGGCGGAGCACGGGCGGCGGCTGGGCGAGGTGTACTCGCGCTACTGCCACGAGATGAGCCGCCTGTCGCTGGAGCTGATGGAGGTGCTCGGGGAGAGCCTGGGCATCGTCGGAGACCGGCGCCACTACTTCCGGCGATTCTTCCAGCGCAACGACTCCATCATGCGCCTCAACTACTACCCGGCGTGCCAGAGGCCACTCGACACGCTGGGCACCGGTCCGCACTGCGACCCCACCTCGCTCACCATCCTCCACCAGGACCACGTCGGCGGCCTGGAGGTGTGGGCGGAGGGGCGGTGGCGCGCCATCCGCCCTCGCCCCGGGGCGCTCGTCGTCAACGTCGGCGACACCTTCATGGCGCTCTCCAACGCCAGGTACCGCAGCTGCCTGCACCGGGCGGTCGTCAACAGCACGGCGCCTCGCCGCTCGCTGGCCTTCTTCCTCTGCCCGGAGATGGACACGGTGGTGCGCCCGCCGGAGGAGCTGGTCGACGACCACCACCCGAGGGT-GTACCCGGACTTCACGTGGCGGGCGCTGCTGGACTTCACGCAGCGCCACTACAGGGCCGACATGCGCACGCTTCAGGCCTTCTCCGACTGGCTTAATCATCATCGTCACCTGCAACCAACAATATACTCCTAGCTCCTAGTCCTAGCTATATACTCCTATTATCCATCCATCCATCCATCTTACACTACTATACCATTAGCATCGATCGATCATCCATTAATTAATTAATTAATTACTAGTTCCGGCTTAGATATATATCTGGCGATTATTTCAGTTCCTAGCTACTCCTACATGCATGCTTTGCTTAATTAGATCTATCTATATAATCTATCCCGGCCGGCCTGTTTTAATTCCATATATCATTTGGTTTGCACGTACCCATCTATGATCTATATATACATGCATGTCGACTATTGTTGGTCGTACGATATTATATTATATATAGATGTAATACATATGTTGAAAATATATTGATTTCTTCTTGCTGTAGGAGTAATTAATTACTCCAGTTGTTGCTGTCACTCGATCAATCCATGGGATATGGGGATCGATCGGCCGAGATGCA]

[+] EMBL AK061017             [ATCGATCGATCGATCTGTTGGCGCAGCGTGTATATAAGGGCGGGAAGGGGAGTGAGAGAGAGCAGCAGCTAGCTAGCCGCGGTCGGTCGATCCAGCTGCTGGGGATGAGTACTTAGTTAGCTCGGAGCTAGCTACTAATGGATGATATACTTATGCTAGTTAGTTAAATACAGTTATTAGTTAGTTGTAGGTTGCATCTATCATATCTCCATCGGTTAATTAATTGATTGATAGCTAGATTATCAACAATTAATGAGCATGGTGGTGCAGCAGGAGCAGGAGGTGGTGTTCGACGCGGCGGTGCTGAGCGGGCAGACGGAGTTCCCGTCGCAGTTCATATGGCCGGCGGAGGAGAGCCCCGGGTCGGTGGCGGTGGAGGAGCTGGAGGTGGCGCTGATCGACGTGGGGGCGGGGGCGGAGAGGTCGTCGGTGGTCCGGCAGGTGGGGGAGGCGTGCGAGAGGCACGGCTTCTTCCTGGTGGTTAACCACGGCATCGAGGCGGCGCTGCTGGAGGAGGCGCACCGGTGCATGGACGCCTTCTTCACGCTGCCGCTGGGGGAGAAGCAGCGGGCGCAGCGGCGCGCGGGGGAGAGCTGCGGCTACGCCAGCAGCTTCACGGGGCGCTTCGCGTCCAAGCTGCCGTGGAAGGAGACGCTGTCGTTCCGGTACTCATCGGCTGGAGATGAAGAGGGCGAGGAGGGCGTGGGTGAGTACCTGGTGCGGAAGCTCGGGGCGGAGCACGGGCGGCGGCTGGGCGAGGTGTACTCGCGCTACTGCCACGAGATGAGCCGCCTGTCGCTGGAGCTGATGGAGGTGCTCGGGGAGAGCCTGGGCATCGTCGGAGACCGGCGCCACTACTTCCGGCGATTCTTCCAGCGCAACGACTCCATCATGCGCCTCAACTACTACCCGGCGTGCCAGAGGCCACTCGACACGCTGGGCACCGGTCCGCACTGCGACCCCACCTCGCTCACCATCCTCCACCAGGACCACGTCGGCGGCCTGGAGGTGTGGGCGGAGGGGCGGTGGCGCGCCATCCGCCCTCGCCCCGGGGCGCTCGTCGTCAACGTCGGCGACACCTTCATGGCGCTCTCCAACGCCAGGTACCGCAGCTGCCTGCACCGGGCGGTCGTCAACAGCACGGCGCCTCGCCGCTCGCTGGCCTTCTTCCTCTGCCCGGAGATGGACACGGTGGTGCGCCCGCCGGAGGAGCTGGTCGACGACCACCACCCGAGGGT GTACCCGGACTTCACGTGGCGGGCGCTGCTGGACTTCACGCAGCGCCACTACAGGGCCGACATGCGCACGCTTCAGGCCTTCTCCGACTGGCTTAATCATCATCGTCACCTGCAACCAACAATATACTCCTAGCTCCTAGTCCTAGCTATATACTCCTATTATCCATCCATCCATCCATCTTACACTACTATACCATTAGCATCGATCGATCATCCATTAATTAATTAATTAATTACTA                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK099111             [                                                                       GCTAGCCGCGGTCGGTCGATCCAGCTGCTGGGGATGAGTACTTAGTTAGCTCGGAGCTAGCTACTAATGGATGATATACTTATGCTAGTTAGTTAAATACAGTTATTAGTTAGTTGTAGGTTGCATCTATCATATCTCCATCGGTTAATTAATTGATTGATAGCTAGATTATCAACAATTAATGAGCATGGTGGTGCAGCAGGAGCAGGAGGTGGTGTTCGACGCGGCGGTGCTGAGCGGGCAGACGGAGATCCCGTCGCAGTTCATATGGCCGGCGGAGGAGAGCCCCGGGTCGGTGGCGGTGGAGGAGCTGGAGGTGGCGCTGATCGACGTGGGGGCGGGGGCGGAGAGGTCGTCGGTGGTCCGGCAGGTGGGGGAGGCGTGCGAGAGGCACGGCTTCTTCCTGGTGGTTAACCACGGCATCGAGGCGGCGCTGCTGGAGGAGGCGCACCGGTGCATGGACGCCTTCTTCACGCTGCCGCTGGGGGAGAAGCAGCGGGCGCAGCGGCGCGCGGGGGAGAGCTGCGGCTACGCCAGCAGCTTCACGGGGCGCTTCGCGTCCAAGCTGCCGTGGAAGGAGACGCTGTCGTTCCGGTACTCATCGGCTGGAGATGAAGAGGGCGAGGAGGGCGTGGGTGAGTACCTGGTGCGGAAGCTCGGGGCGGAGCACGGGCGGCGGCTGGGCGAGGTGTACTCGCGCTACTGCCACGAGATGAGCCGCCTGTCGCTGGAGCTGATGGAGGTGCTCGGGGAGAGCCTGGGCATCGTCGGAGACCGGCGCCACTACTTCCGGCGATTCTTCCAGCGCAACGACTCCATCATGCGCCTCAACTACTACCCGGCGTGCCAGAGGCCACTCGACACGCTGGGCACCGGTCCGCACTGCGACCCCACCTCGCTCACCATCCTCCACCAGGACCACGTCGGCGGCCTGGAGGTGTGGGCGGAGGGGCGGTGGCGCGCCATCCGCCCTCGCCCCGGGGCGCTCGTCGTCAACGTCGGCGACACCTTCATGGCGCTCTCCAACGCCAGGTACCGCAGCTGCCTGCACCGGGCGGTCGTCAACAGCACGGCGCCTCGCCGCTCGCTGGCCTTCTTCCTCTGCCCGGAGATGGACACGGTGGTGCGCCCGCCGGAGGAGCTGGTCGACGACCACCACCCGAGGGT GTACCCGGACTTCACGTGGCGGGCGCTGCTGGACTTCACGCAGCGCCACTACAGGGCCGACATGCGCACGCTTCAGGCCTTCTCCGACTGGCTTAATCATCATCGTCACCTGCAACCAACAATATACTCCTAGCTCCTAGTCCTAGCTATATACTCCTATTATCCATCCATCCATCCATCTTACACTACTATACCATTAGCATCGATCGATCATCCATTAATTAATTA                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSU50333             [                                                                                            CAGCGGCTGGGGATGAGTACTTAGTTAGCTCGGAGCTAGCTACTAATGGATGATATACTTATGCTAGTTAGTTAAATACAGTTATTAGTTAGTTGTAGGTTGCATCTATCATATCTCCATCGGTTAATTAATTGATTGATAGCTAGATTATCAACAATTAATGAGCATGGTGGTGCAGCAGGAGCAGGAGGTGGTGTTCGACGCGGCGGTGCTGAGCGGGCAGACGGAGATCCCGTCGCAGTTCATATGGCCGGCGGAGGAGAGCCCCGGGTCGGTGGCGGTGGAGGAGCTGGAGGTGGCGCTGATCGACGTGGGGGCGGGGGCGGAGAGGTCGTCGGTGGTCCGGCAGGTGGGGGAGGCGTGCGAGAGGCACGGCTTCTTCCTGGTGGTTAACCACGGCATCGAGGCGGCGCTGCTGGAGGAGGCGCACCGGTGCATGGACGCCTTCTTCACGCTGCCGCTGGGGGAGAAGCAGC GGCGCAGCGGCGCGCGGGGGAGAACTGCG  TACGCCAGCAGCTTCACGGGGCGCTTCGCGTCCAAGCTGCCGTGGAAGGAGACGCTGTCGTTCCGGTACTCATCGGCTGGAGATGAAGAGGGCGAGGAGGGCGTGGGTGAGTACCTGGTGCGGAAGCTCGGGGCGGAGCACGGGCGGCGGCTGGGCGAGGTGTACTCGCGCTACTGCCACGAGATGAGCCGCCTGTCGCTGGAGCTGATGGAGGTGCTCGGGGAGAGCCTGGGCATCGTCGGAGACCGGCGCCACTACTTCCGGCGATTCTTCCAGCGCAACGACTCCATCATGCGCCTCAACTACTACCCGGCGTGCCAGAGGCCACTCGACACGCTGGGCACCGGTCCGCACTGCGACCCCACCTCGCTCACCATCCTCCACCAGGACCACGTCGGCGGCCTGGAGGTGTGGGCGGAGGGGCGGTGGCGCGCCATCCGCCCTCGCCCCGGGGCGCTCGTCGTCAACGTCGGCGACACCTTCATGGCGCTCTCCAACGCCAGGTACCGCAGCTGCCTGCACCGGGCGGTCGTCAACAGCACGGCGCCTCGCCGCTCGCTGGCCTTCTTCCTCTGCCCGGAGATGGACACGGTGGTGCGCCCGCCGGAGGAGCTGGTCGACGACCACCACCCGAGGGT GTACCCGGACTTCACGTGGCGGGCGCTGCTGGACTTCACGCAGCGCCACTACAGGGCCGACATGCGCACGTTTCAGGCCTTCTCCGACTGGCTTAATCATCATCGTCACCTGCAACCAACAATATACTCCTAGCTCCTAGTCCTAGCTATATACTCCTATTATCCATCCATCCATCCATCTTACACTACTATACCATTAGCATCGATCGATCATCCATTAATTAATTAATTAATTACTAGTTCCGGCTTAGATATATATCTGGCGATTATTTCAGTTCCTAGCTACTCCTACATGCATGCTTTGCTTAATTAGATCTATCTATCTAATCTATCCCGGCCGGCCTGTTTTAATTCCATATATCATTTGGTTTGCACGTACCCATCTATGATCTATATATACATGCATGTCGACTATTGTTGGTCGTACGATATTATA                                                                                                                                  ]
[+] EMBL CB656914             [                                                                                                                                                                                                                                                                                                                                                                                                       CGCTCTTTAACGTGGGGGCGGGGGCGGAGAGGTCGTCGGTGGTCCGGCAGGTGGGGGAGGCGTGCGAGAGGCACGGCTTCTTCCTGGTGGTTAACCACGGCATCAAGGCGGCGCTGCTGGAGGAGGCGCACCGGTGCATGGACGCCTTCTTCACGCTGCCGCTGGGGGAGAAGCAGCGGGCGCAGCGGCGCGCGGGGGAGAGCTGCGGCTACGCCAGCAGCTTCACGGGGCGCTTCGCGTCCAAGCTGCCGTGGAAGGAGACGCTGTCGTTCCGGTACTCATCGGCTGGAGATGAAGAGGGCGAGGAGGGCGTGGGTGAGTACCTGGTGCGGAAGCTCGGGGCGGAGCACGGGCGGCGGCTGGGCGAGGTGTACTCGCGCTACTGCCACGAGATGAGCCGCCTGTCGCTGGAGCTGATGGAGGTGCTCGGGGAGAGCCTGGGCATCGTCGGAGACCGGCGCCACTACTTCCGGCGATTCTTCCAGCGCAACGACTCCATCATGCGCCTCAACTACTACCCGGCGTGCCAGAGGCCACTCGACACGCTGGGCACCGGTCCGCACTGCGACCCCACCTCGCTCACCATCCTCCACCAGGACCACGTCGGCGGCCTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA997904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCTTCACGGGGCGCTTCGCGTCCAAGCTGCCGTGGAAGGAGACGCTGTCGTTCCGGTACTCATCGGCTGGAGATGAAGAGGGCGAGGAGGGCGTGGGTGAGTACCTGGTGCGGAAGCTCGGGGCGGAGCACGGGCGGCGGCTGGGCTAGGTGTACTCTTTCTACTGCCACGAGATGAGCCGCCTGTCGCTGGAGCTGATGGAGGTGCTCGGGGAGAGCCTGGGCATCGTCGGAGACCGGCGCCACTACTTCCGGCGATTCTTCCAGCGCAACGACTCCATCATGCGCCTCAACTACTACCCGGCGTGCCAGAGGCCACTCGACACGCTGGGCACCGGTCCGCACTGCGACCCCACCTCGCTCACCATCCTCCACCAGGACCACGTCGGCGGCCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB656915             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCCCCGGGGCGCTCGTCGTCAACGTCGGCGACACCTTCATGGCGCTCTCCAACGCCAGGTACCGCAGCTGCCTGCACCGGGCGGTCGTCAACAGCACGGCGCCTCGCCGCTCGCTGGCCTTCTTCCTCTGCCCGGAGATGGACACGGTGGTGCGCCCGCCGGAGGAGCTGGTCGACGACCACCACCCGAGGGT GTACCCGGACTTCACGTGGCGGGCGCTGCTGGACTTCACGCAGCGCCACTACAGGGCCGACATGCGCACGCTTCAGGCCTTCTCCGACTGGCTTAATCATCATCGTCACCTGCAACCAACAATATACTCCTAGCTCCTAGTCCTAGCTATATACTCCTATTATCCATCCATCCATCCATCTTACACTACTATACCATTAGCATCGATCGATCATCCATTAATTAATTAATTAATTACTAGTTCCGGCTTAGATATATATCTGGCGATTATTTCAGTTCCTAGCTACTCCTACATGCATGCTTTGCTTAATTAGATCTATCTATAAGATCTATCCCGGCCGGCCT                                                                                                                                                                                                                              ]
[+] EMBL CA999528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTACCGCAGCTGCCTGCACCGGGCGGTCGTCAACAGCACGGCGCCTCGCCGCTCGCTGGCCTTCTTCCTCTGCCCGGAGATGGACACGGTGGTGCGCCCGCCGGAGGAGCTGGTCGACGACCACCACCCGAGGGTGGTACCCGGACTTCACGTGGCGGGCGCTGCTGGACTTCACGCAGCGCCACTACAGGGCCGACATGCGCACGCTTCAGGCCTTCTCCGACTGGCTTAATCATCATCGTCACCTGCAACCAACAATATACTCCTAGCTCCTAGTCCTAGCTATATACTCCTATTATCCATCCATCCATCCATCTTACACTACTATACCATTAGCATCGATCGATCATCCATTAATTAATTAATTAAT                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB684857             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gcatcATTATTTCAGTTCCTAGCTACTCCTACATGCATGCTTTGCTTAATTAGATCTATCTATATAATCTATCCCGGCCGGCCTGTTTTAATTCCATATATCATTTGGTTTGCACGTACCCATCTATGATCTATATATACATGCATGTCGACTATTGTTGGTCGTACGATATTATATTATATATAGATGTAATACATATGTTGAAAATATATTGATTTCTTCTTGCTGTAGGAGTAATTAATTACTCCAGTTGTTGCTGTCACTCGATCAATCCATGGGATATGGGGATCGATCGGCCGAGATGCA]


>consensus_11825#0 ATCGATCGATCGATCTGTTGGCGCAGCGTGTATATAAGGGCGGGAAGGGGAGTGAGAGAG AGCAGCAGCTAGCTAGCCGCGGTCGGTCGATCCAGCTGCTGGGGATGAGTACTTAGTTAG CTCGGAGCTAGCTACTAATGGATGATATACTTATGCTAGTTAGTTAAATACAGTTATTAG TTAGTTGTAGGTTGCATCTATCATATCTCCATCGGTTAATTAATTGATTGATAGCTAGAT TATCAACAATTAATGAGCATGGTGGTGCAGCAGGAGCAGGAGGTGGTGTTCGACGCGGCG GTGCTGAGCGGGCAGACGGAGATCCCGTCGCAGTTCATATGGCCGGCGGAGGAGAGCCCC GGGTCGGTGGCGGTGGAGGAGCTGGAGGTGGCGCTGATCGACGTGGGGGCGGGGGCGGAG AGGTCGTCGGTGGTCCGGCAGGTGGGGGAGGCGTGCGAGAGGCACGGCTTCTTCCTGGTG GTTAACCACGGCATCGAGGCGGCGCTGCTGGAGGAGGCGCACCGGTGCATGGACGCCTTC TTCACGCTGCCGCTGGGGGAGAAGCAGCGGGCGCAGCGGCGCGCGGGGGAGAGCTGCGGC TACGCCAGCAGCTTCACGGGGCGCTTCGCGTCCAAGCTGCCGTGGAAGGAGACGCTGTCG TTCCGGTACTCATCGGCTGGAGATGAAGAGGGCGAGGAGGGCGTGGGTGAGTACCTGGTG CGGAAGCTCGGGGCGGAGCACGGGCGGCGGCTGGGCGAGGTGTACTCGCGCTACTGCCAC GAGATGAGCCGCCTGTCGCTGGAGCTGATGGAGGTGCTCGGGGAGAGCCTGGGCATCGTC GGAGACCGGCGCCACTACTTCCGGCGATTCTTCCAGCGCAACGACTCCATCATGCGCCTC AACTACTACCCGGCGTGCCAGAGGCCACTCGACACGCTGGGCACCGGTCCGCACTGCGAC CCCACCTCGCTCACCATCCTCCACCAGGACCACGTCGGCGGCCTGGAGGTGTGGGCGGAG GGGCGGTGGCGCGCCATCCGCCCTCGCCCCGGGGCGCTCGTCGTCAACGTCGGCGACACC TTCATGGCGCTCTCCAACGCCAGGTACCGCAGCTGCCTGCACCGGGCGGTCGTCAACAGC ACGGCGCCTCGCCGCTCGCTGGCCTTCTTCCTCTGCCCGGAGATGGACACGGTGGTGCGC CCGCCGGAGGAGCTGGTCGACGACCACCACCCGAGGGTGTACCCGGACTTCACGTGGCGG GCGCTGCTGGACTTCACGCAGCGCCACTACAGGGCCGACATGCGCACGCTTCAGGCCTTC TCCGACTGGCTTAATCATCATCGTCACCTGCAACCAACAATATACTCCTAGCTCCTAGTC CTAGCTATATACTCCTATTATCCATCCATCCATCCATCTTACACTACTATACCATTAGCA TCGATCGATCATCCATTAATTAATTAATTAATTACTAGTTCCGGCTTAGATATATATCTG GCGATTATTTCAGTTCCTAGCTACTCCTACATGCATGCTTTGCTTAATTAGATCTATCTA TATAATCTATCCCGGCCGGCCTGTTTTAATTCCATATATCATTTGGTTTGCACGTACCCA TCTATGATCTATATATACATGCATGTCGACTATTGTTGGTCGTACGATATTATATTATAT ATAGATGTAATACATATGTTGAAAATATATTGATTTCTTCTTGCTGTAGGAGTAATTAAT TACTCCAGTTGTTGCTGTCACTCGATCAATCCATGGGATATGGGGATCGATCGGCCGAGA TGCA



consensusID : consensus_11825#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 337
fasta sequence
                              [CATCTTGACACTGACTATGACCAATTAAGCATGCGATGCGGATGCATCGCATTGAATTGAATTGAATTAATTAACTAAGTTGCCGGCTTAAGGATAATAATAATGCTGGCGATTGATTTGCAGGTTGCCTGAGCTGATCTGCCTGACATGGCATGGCTTTGGCTTGAATGTGAGGATGCTGATGCNATCTAATCTATCCCGCCGGCCTGTTTTAATTCCATANATCATTTGGTTTGCACGTACCCATCTATGATCTATATATACANGCATGTCGACTATTGTTGTCGTACGATATTATATTATATATAGATGTAATACATATGTNGAAAATAAAAAA]

[+] EMBL BI806124             [CATCTTGACACTGACTATGACCAATTAAGCATGCGATGCGGATGCATCGCATTGAATTGAATTGAATTAATTAACTAAGTTGCCGGCTTAAGGATAATAATAATGCTGGCGATTGATTTGCAGGTTGCCTGAGCTGATCTGCCTGACATGGCATGGCTTTGGCTTGAATGTGAGGATGCTGATGCNATCTAATCTATCCCGCCGGCCTGTTTTAATTCCATANATCATTTGGTTTGCACGTACCCATCTATGATCTATATATACANGCATGTCGACTATTGTTGTCGTACGATATTATATTATATATAGATGTAATACATATGTNGAAAATAAAAAA]


>consensus_11825#1 CATCTTGACACTGACTATGACCAATTAAGCATGCGATGCGGATGCATCGCATTGAATTGA ATTGAATTAATTAACTAAGTTGCCGGCTTAAGGATAATAATAATGCTGGCGATTGATTTG CAGGTTGCCTGAGCTGATCTGCCTGACATGGCATGGCTTTGGCTTGAATGTGAGGATGCT GATGCNATCTAATCTATCCCGCCGGCCTGTTTTAATTCCATANATCATTTGGTTTGCACG TACCCATCTATGATCTATATATACANGCATGTCGACTATTGTTGTCGTACGATATTATAT TATATATAGATGTAATACATATGTNGAAAATAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11825#0      ATCGATCGATCGATCTGTTGGCGCAGCGTGTATATAAGGGCGGGAAGGGGAGTGAGAGAG 60
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      AGCAGCAGCTAGCTAGCCGCGGTCGGTCGATCCAGCTGCTGGGGATGAGTACTTAGTTAG 120
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      CTCGGAGCTAGCTACTAATGGATGATATACTTATGCTAGTTAGTTAAATACAGTTATTAG 180
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      TTAGTTGTAGGTTGCATCTATCATATCTCCATCGGTTAATTAATTGATTGATAGCTAGAT 240
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      TATCAACAATTAATGAGCATGGTGGTGCAGCAGGAGCAGGAGGTGGTGTTCGACGCGGCG 300
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      GTGCTGAGCGGGCAGACGGAGATCCCGTCGCAGTTCATATGGCCGGCGGAGGAGAGCCCC 360
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      GGGTCGGTGGCGGTGGAGGAGCTGGAGGTGGCGCTGATCGACGTGGGGGCGGGGGCGGAG 420
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      AGGTCGTCGGTGGTCCGGCAGGTGGGGGAGGCGTGCGAGAGGCACGGCTTCTTCCTGGTG 480
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      GTTAACCACGGCATCGAGGCGGCGCTGCTGGAGGAGGCGCACCGGTGCATGGACGCCTTC 540
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      TTCACGCTGCCGCTGGGGGAGAAGCAGCGGGCGCAGCGGCGCGCGGGGGAGAGCTGCGGC 600
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      TACGCCAGCAGCTTCACGGGGCGCTTCGCGTCCAAGCTGCCGTGGAAGGAGACGCTGTCG 660
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      TTCCGGTACTCATCGGCTGGAGATGAAGAGGGCGAGGAGGGCGTGGGTGAGTACCTGGTG 720
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      CGGAAGCTCGGGGCGGAGCACGGGCGGCGGCTGGGCGAGGTGTACTCGCGCTACTGCCAC 780
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      GAGATGAGCCGCCTGTCGCTGGAGCTGATGGAGGTGCTCGGGGAGAGCCTGGGCATCGTC 840
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      GGAGACCGGCGCCACTACTTCCGGCGATTCTTCCAGCGCAACGACTCCATCATGCGCCTC 900
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      AACTACTACCCGGCGTGCCAGAGGCCACTCGACACGCTGGGCACCGGTCCGCACTGCGAC 960
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      CCCACCTCGCTCACCATCCTCCACCAGGACCACGTCGGCGGCCTGGAGGTGTGGGCGGAG 1020
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      GGGCGGTGGCGCGCCATCCGCCCTCGCCCCGGGGCGCTCGTCGTCAACGTCGGCGACACC 1080
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      TTCATGGCGCTCTCCAACGCCAGGTACCGCAGCTGCCTGCACCGGGCGGTCGTCAACAGC 1140
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      ACGGCGCCTCGCCGCTCGCTGGCCTTCTTCCTCTGCCCGGAGATGGACACGGTGGTGCGC 1200
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      CCGCCGGAGGAGCTGGTCGACGACCACCACCCGAGGGTGTACCCGGACTTCACGTGGCGG 1260
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      GCGCTGCTGGACTTCACGCAGCGCCACTACAGGGCCGACATGCGCACGCTTCAGGCCTTC 1320
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      TCCGACTGGCTTAATCATCATCGTCACCTGCAACCAACAATATACTCCTAGCTCCTAGTC 1380
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      CTAGCTATATACTCCTATTATCCATCCATCCATCCATCTTACACTACTATACCATTAGCA 1440
consensus_11825#1      -------CATCTTGACACTGACTATG-ACCAATTAAGCATGCGATGCGGATGCATC-GCA 51
                               **  *   * *  * **  * * **  * * * *  * *     ***  ***

consensus_11825#0      TCGATCGATCATCCATTAATTAATTAATTAATTACTAGTTCCGGCTTAGATATATATCTG 1500
consensus_11825#1      TTGAATTGAATTGAATTAATTAACTAA---GTTGCCGGCTTAAGGATAATAATAATGCTG 108
                       * **       *  ********* ***    ** *  * *   *  **   ***   ***

consensus_11825#0      GCGATTATTT--CAGTT---CCTAGCTACTCCT----ACATG-CATGCTTT--GCTTAAT 1548
consensus_11825#1      GCGATTGATTTGCAGGTTGCCTGAGCTGATCTGCCTGACATGGCATGGCTTTGGCTTGAA 168
                       ******  **  *** *   *  ****  **      ***** ****  **  **** * 

consensus_11825#0      TAGATCTAT-------CTATATAATCTATCCCGGCCGGCCTGTTTTAATTCCATATATCA 1601
consensus_11825#1      TGTGAGGATGCTGATGCNATCTAATCTATCCCG-CCGGCCTGTTTTAATTCCATANATCA 227
                       *      **       * ** ************ ********************* ****

consensus_11825#0      TTTGGTTTGCACGTACCCATCTATGATCTATATATACATGCATGTCGACTATTGTTGGTC 1661
consensus_11825#1      TTTGGTTTGCACGTACCCATCTATGATCTATATATACANGCATGTCGACTATTGTTG-TC 286
                       ************************************** ****************** **

consensus_11825#0      GTACGATATTATATTATATATAGATGTAATACATATGTTGAAAATATATTGATTTCTTCT 1721
consensus_11825#1      GTACGATATTATATTATATATAGATGTAATACATATGTNGAAAATAAAAAA--------- 337
                       ************************************** ******* *            

consensus_11825#0      TGCTGTAGGAGTAATTAATTACTCCAGTTGTTGCTGTCACTCGATCAATCCATGGGATAT 1781
consensus_11825#1      ------------------------------------------------------------
                                                                                   

consensus_11825#0      GGGGATCGATCGGCCGAGATGCA 1804
consensus_11825#1      -----------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)