These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11828#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2811 fasta sequence [TGTAACAAAGAAACAAGGATCCATCGATCGATCGATCGATCTCCATCGACATCGAGTCCTCACTCTCTGCCTGCGGCTGCGCCGTCGCGTGCCGCCGATCTCCATCACCACCTGCGGCCTCCACTGCCCAATCCCCGTCTCCTCGCTGATTCCCGCCGCCGAGGAGGAGGGGGAGGGAGGGAGGGAGGGGGGGCAGCAGCGGTGGGTGCCCCGTCGTCCTGCTGCTCTCCGCCTCCGCTCCGGATCTGGAGCTGAGATTAATGAAATAAGATGCTCCTCAAGAGCAAATTCAAGTTGGCCACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGTTTGTGTAATTTGGATTAAATTTCTAATGTAAGCAGATGGATATCCTTCTAATATCTTCCTAGCAGTTATTGTTTGACTGGCTGTTAGTTTCTTCTTCTCTAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAAGAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTGATAG-AGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGAACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGT-AC-AAATGTCTATTAACA-GGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCCAATGGGCTTATG-CCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTTTCCCCTTTAACTGCTGCAAACGTTACATGTGCCTGTGAGTTTAAAAAAAAAA] [+] EMBL AK101319 [TGTAACAAAGAAACAAGGATCCATCGATCGATCGATCGATCTCCATCGACATCGAGTCCTCACTCTCTGCCTGCGGCTGCGCCGTCGCGTGCCGCCGATCTCCATCACCACCTGCGGCCTCCACTGCCCAATCCCCGTCTCCTCGCTGATTCCCGCCGCCGAGGAGGAGGGGGAGGGAGGGAGGGAGGGGGGGCAGCAGCGGTGGGTGCCCCGTCGTCCTGCTGCTCTCCGCCTCCGCTCCGGATCTGGAGCTGAGATTAATGAAATAAGATGCTCCTCAAGAGCAAATTCAAGTTGGCCACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGTTTGTGTAATTTGGATTAAATTTCTAATGTAAGCAGATGGATATCCTTCTAATATCTTCCTAGCAGTTATTGTTTGACTGGCTGTTAGTTTCTTCTTCTCTAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAAGAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTGATAG AGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGAACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGT AC AAATGTCTATTAACA GGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCCAATGGGCTTATG CCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTTTCCCCTTTAACTGCTGCAAACGT ] [+] EMBL CB670500 [ AATAAGATCCTCCTCAAGAGCAAATTCAAGTTGGCCACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTT ] [-] EMBL CB670501 [ AAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATTTGATAGAAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATTTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATTTTGAGTTATACGACCTCGACACAGGAACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGT AC AAATGTCTATTAACA GGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCCAATGGGCTTAT ] [-] EMBL CA998467 [ GCCAAGACACACAGCAGGAATCTGATAGAAGTGACATGAATAAATCCTCAGAGCAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCGTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACTGGAACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGT AC AAATGTCTATTAACA GGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCCAATGGGCTTATG CCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTTTCCCCTTTAACTGCTGCAAACGTTACATGTGCCTGTGAG ] [+] EMBL BI801145 [ TTTGGACCTGAAGAAATTGCTTGTGTGACAAAATGTCTATTAACACGGGAATACCTTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCC ATGGGCTTATGCCCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTTTCCCCTTTAACTGCTGC AACGTTACATGTGCCTGTGAGTTTAAAAAAAAAA] consensusID : consensus_11828#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2263 fasta sequence [CACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTGATAGAAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGGACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGTACAAATGTCTATTAACAGGGAATACATTGATTT] [+] EMBL AK060754 [CACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGGCTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTGATAGAAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGGACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGTACAAATGTCTATTAACAGGGAATACATTGATTT] [+] EMBL CB645919 [ AATCTCCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGC ] [+] EMBL CB646057 [ GGGTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGCCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGC ] [+] EMBL CF305672 [ TTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11828#0 TGTAACAAAGAAACAAGGATCCATCGATCGATCGATCGATCTCCATCGACATCGAGTCCT 60 consensus_11828#1 ------------------------------------------------------------ consensus_11828#0 CACTCTCTGCCTGCGGCTGCGCCGTCGCGTGCCGCCGATCTCCATCACCACCTGCGGCCT 120 consensus_11828#1 ------------------------------------------------------------ consensus_11828#0 CCACTGCCCAATCCCCGTCTCCTCGCTGATTCCCGCCGCCGAGGAGGAGGGGGAGGGAGG 180 consensus_11828#1 ------------------------------------------------------------ consensus_11828#0 GAGGGAGGGGGGGCAGCAGCGGTGGGTGCCCCGTCGTCCTGCTGCTCTCCGCCTCCGCTC 240 consensus_11828#1 ------------------------------------------------------------ consensus_11828#0 CGGATCTGGAGCTGAGATTAATGAAATAAGATGCTCCTCAAGAGCAAATTCAAGTTGGCC 300 consensus_11828#1 -----------------------------------------------------------C 1 * consensus_11828#0 ACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAAT 360 consensus_11828#1 ACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAAT 61 ************************************************************ consensus_11828#0 TATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGA 420 consensus_11828#1 TATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGA 121 ************************************************************ consensus_11828#0 CCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCT 480 consensus_11828#1 CCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCT 181 ************************************************************ consensus_11828#0 TATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCA 540 consensus_11828#1 TATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCA 241 ************************************************************ consensus_11828#0 AAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCC 600 consensus_11828#1 AAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCC 301 ************************************************************ consensus_11828#0 AGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGC 660 consensus_11828#1 AGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGC 361 ************************************************************ consensus_11828#0 ATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCA 720 consensus_11828#1 ATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCA 421 ************************************************************ consensus_11828#0 CTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAA 780 consensus_11828#1 CTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAA 481 ************************************************************ consensus_11828#0 AAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACA 840 consensus_11828#1 AAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACA 541 ************************************************************ consensus_11828#0 GAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAA 900 consensus_11828#1 GAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAA 601 ************************************************************ consensus_11828#0 TGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTA 960 consensus_11828#1 TGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTA 661 ************************************************************ consensus_11828#0 GCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGC 1020 consensus_11828#1 GCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGC 721 ************************************************************ consensus_11828#0 AGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACT 1080 consensus_11828#1 AGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACT 781 ************************************************************ consensus_11828#0 CTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGTTTGTGTAATTTGGATTAAATTTCTA 1140 consensus_11828#1 CTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGG-------------------------- 815 ********************************** consensus_11828#0 ATGTAAGCAGATGGATATCCTTCTAATATCTTCCTAGCAGTTATTGTTTGACTGGCTGTT 1200 consensus_11828#1 ------------------------------------------------------------ consensus_11828#0 AGTTTCTTCTTCTCTAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGA 1260 consensus_11828#1 ------------------ATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGA 857 ****************************************** consensus_11828#0 TCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATG 1320 consensus_11828#1 TCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATG 917 ************************************************************ consensus_11828#0 GTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCAT 1380 consensus_11828#1 GTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCAT 977 ************************************************************ consensus_11828#0 CAACTACAAGAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTC 1440 consensus_11828#1 CAACTACAATAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTC 1037 ********* ************************************************** consensus_11828#0 CACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGT 1500 consensus_11828#1 CACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGT 1097 ************************************************************ consensus_11828#0 TATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTC 1560 consensus_11828#1 TATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTC 1157 ************************************************************ consensus_11828#0 CCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGC 1620 consensus_11828#1 CCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGC 1217 ************************************************************ consensus_11828#0 TGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGA 1680 consensus_11828#1 TGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGA 1277 ************************************************************ consensus_11828#0 TTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATC 1740 consensus_11828#1 TTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATC 1337 ************************************************************ consensus_11828#0 GGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTG 1800 consensus_11828#1 GGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTG 1397 ************************************************************ consensus_11828#0 GGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGC 1860 consensus_11828#1 GGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGC 1457 ************************************************************ consensus_11828#0 TATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTT 1920 consensus_11828#1 TATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTT 1517 ************************************************************ consensus_11828#0 TCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCC 1980 consensus_11828#1 TCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCC 1577 ************************************************************ consensus_11828#0 AACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAAC 2040 consensus_11828#1 AACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAAC 1637 ************************************************************ consensus_11828#0 CTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTG 2100 consensus_11828#1 CTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTG 1697 ************************************************************ consensus_11828#0 GTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTC 2160 consensus_11828#1 GTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTC 1757 ************************************************************ consensus_11828#0 CTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATG 2220 consensus_11828#1 CTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATG 1817 ************************************************************ consensus_11828#0 AGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTG 2280 consensus_11828#1 AGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTG 1877 ************************************************************ consensus_11828#0 ATAGA-GTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAA 2339 consensus_11828#1 ATAGAAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAA 1937 ***** ****************************************************** consensus_11828#0 CACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACC 2399 consensus_11828#1 CACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACC 1997 ************************************************************ consensus_11828#0 TTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTT 2459 consensus_11828#1 TTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTT 2057 ************************************************************ consensus_11828#0 TGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGG 2519 consensus_11828#1 TGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGG 2117 ************************************************************ consensus_11828#0 ATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGAACTAACACTTAG 2579 consensus_11828#1 ATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGGACTAACACTTAG 2177 *********************************************** ************ consensus_11828#0 GTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGTACAAATG 2639 consensus_11828#1 GTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGTACAAATG 2237 ************************************************************ consensus_11828#0 TCTATTAACAGGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAAT 2699 consensus_11828#1 TCTATTAACAGGGAATACATTGATTT---------------------------------- 2263 ************************** consensus_11828#0 GTGAAGGAATCCAATGGGCTTATGCCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTT 2759 consensus_11828#1 ------------------------------------------------------------ consensus_11828#0 TCCCCTTTAACTGCTGCAAACGTTACATGTGCCTGTGAGTTTAAAAAAAAAA 2811 consensus_11828#1 ---------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||