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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11848#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2034 fasta sequence
[CATCCACTCCACACCACACGCTTCACTGGTTCCGAGCACTCGCCACCGATACACTCCAGTGGCAGCCGAGCTAGCCGAGAGCCAAGCAACTTGCCGTGGCCAATAAGCTCCCGTGAGCTGACGTCTCGTGCTCGACGGCTCGGCGCTATATATAAAAGCGTAGTAAGCTGGTAAAAAATTCACAAGGCCACGCGCATCTTGTCTCGGCCAAAAAAAAGAGAGCGCACACGCGGTTGATTTGTTTGACCGACGCGCGTAGGCGGAGGCGGCGAGCTAGCGGGGCCGGCGGGCATGTCGTGGTCCGAGACGGACGCCGCGCTGTTCGCGGCGGTGCTGGGGCACGACGCGGCGCATCACCTGGCCACCACGCCGCCGCACCTCGACGCGCCGGAGGGGTCGCCGTCGTCGGCCGAGCTGCAGGCGAGCCTGCACGACCTCGTCGAGCGGCAGGGAGGGGCCTGGACGTACGGCATCTTCTGGCAGGAGTCCCGCGGCGCCGGTGCCGCCAGCGGCCGCGCTGCCCGCGCCGTGCTCGGCTGGGGCGACGGCCACTGCCGCGACGGTGCCGGACACGGGGAGGTCGGCGCCGCGGAGAGGAGCGTGGCGCGGAAGCGCGTGCTGCTGCGGCTGCACGCGCTGTACGGAGGCGGGGATGAGGATGGCGCCGACTACGCGCTCCGGCTGGACCGGGTCACCGGCGCCGAGATGTACTTCCTGGCGTCCATGTACTTCTCCTTCCCGGAGGGCTCGGGCGGACCGGGCCGCGCTCTGGCCTCCGGCCGCCACGCCTGGGCGGACGTAGACCCCCACCCTTCCGGCTCCGGTAGCGCGCCAGGGTGGTACGTTCGCTCGTCTCTCGCCCAGTCCGCGGGGTTACGCACCGTCGTCTTCCTCCCGTGCAAGGGCGGCGTTCTCGAGCTCGGTTCCGTCGTAGCCATCCGCGAGACCCCCGAGGTCTTGCGCGCCATCCAATCTGCCATGCGCGCCGTGCCAGCTCCGCCGGAAGATTTCATGAGAATCTTCGGCAAGGATCTCTCACCCGGCCGACCGTCCCAGCCCATGGGATGCGACGCCCCATGGACGCCGCGGCTCGTTGTCCAAACCACGCCGGTGCGCCCAGCCAAGAGCTTGGACTTCTCCAAGGCGAACGTGCAGGAACAGGCCGGCGGCCAGGAGCGGCGGCCGCGGAAGCGTGGGCGCAAGCCGGCGAACGGGCGGGAGGAGCCGCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAGAGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCCCTGCTCAGCGACGCCATCGCGTACATCCAGGAGCTGGAGGCCCGGCTCAGGGGCGACGCGCCCGTGCCCGCGCGGGCGGATGGGCCGGCCGTGGAGGTGAAGGCAATGCAGGACGAGGTGGTGCTGCGCGTGACCACGCCCCTGGACGAGCACCCCATCTCCAGGGTGTTCCACGCCATGAGGGAATCCCAGATCAGCGTCGTGGCGTCGGACGTGGCGGTGTCGGACGACGCCGTCACGCACACGCTCATGGTGCGGTCGGCCGGGCCGGAGCGGCTCACGGCGGAGACGGTGCTCGCGGCGATGTCGCGGGGGGTGAGCGTCACCACTCCCTCCCCGTGACAGTGCAGTGCAGTAAGTTAGTACTGTACTACCAGTACAGCAGTA---CTCGTGCGTACGGTATAGCTGCCAACTGTTATCAGTCTTTGAATCCTAGGTAGGTGCAACTCCTTGTGACTTCAAGCAATTAATGGAAGCAAAGATGATATTTATATATTTCTTTTCCTGATTTATATGTTAGATTTAGATCATTGTCTTAAAAAAATGTTAGATTAAGATGCATGTACACAAATTTAGCCTGAAGCATCGTATAGGGGTTTTCCATACTTTGATATGGCAATGACATGTCCTGGTTGTTGGATAAGCTTTTGTTTTCGCTCAAGGCGTGGGGAGGGAAAAAAAAAAGAGAACTGCTTAGTCACT]
[+] EMBL AK064946 [CATCCACTCCACACCACACGCTTCACTGGTTCCGAGCACTCGCCACCGATACACTCCAGTGGCAGCCGAGCTAGCCGAGAGCCAAGCAACTTGCCGTGGCCAATAAGCTCCCGTGAGCTGACGTCTCGTGCTCGACGGCTCGGCGCTATATATAAAAGCGTAGTAAGCTGGTAAAAAATTCACAAGGCCACGCGCATCTTGTCTCGGCCAAAAAAAAGAGAGCGCACACGCGGTTGATTTGTTTGACCGACGCGCGTAGGCGGAGGCGGCGAGCTAGCGGGGCCGGCGGGCATGTCGTGGTCCGAGACGGACGCCGCGCTGTTCGCGGCGGTGCTGGGGCACGACGCGGCGCATCACCTGGCCACCACGCCGCCGCACCTCGACGCGCCGGAGGGGTCGCCGTCGTCGGCCGAGCTGCAGGCGAGCCTGCACGACCTCGTCGAGCGGCAGGGAGGGGCCTGGACGTACGGCATCTTCTGGCAGGAGTCCCGCGGCGCCGGTGCCGCCAGCGGCCGCGCTGCCCGCGCCGTGCTCGGCTGGGGCGACGGCCACTGCCGCGACGGTGCCGGACACGGGGAGGTCGGCGCCGCGGAGAGGAGCGTGGCGCGGAAGCGCGTGCTGCTGCGGCTGCACGCGCTGTACGGAGGCGGGGATGAGGATGGCGCCGACTACGCGCTCCGGCTGGACCGGGTCACCGGCGCCGAGATGTACTTCCTGGCGTCCATGTACTTCTCCTTCCCGGAGGGCTCGGGCGGACCGGGCCGCGCTCTGGCCTCCGGCCGCCACGCCTGGGCGGACGTAGACCCCCACCCTTCCGGCTCCGGTAGCGCGCCAGGGTGGTACGTTCGCTCGTCTCTCGCCCAGTCCGCGGGGTTACGCACCGTCGTCTTCCTCCCGTGCAAGGGCGGCGTTCTCGAGCTCGGTTCCGTCGTAGCCATCCGCGAGACCCCCGAGGTCTTGCGCGCCATCCAATCTGCCATGCGCGCCGTGCCAGCTCCGCCGGAAGATTTCATGAGAATCTTCGGCAAGGATCTCTCACCCGGCCGACCGTCCCAGCCCATGGGATGCGACGCCCCATGGACGCCGCGGCTCGTTGTCCAAACCACGCCGGTGCGCCCAGCCAAGAGCTTGGACTTCTCCAAGGCGAACGTGCAGGAACAGGCCGGCGGCCAGGAGCGGCGGCCGCGGAAGCGTGGGCGCAAGCCGGCGAACGGGCGGGAGGAGCCGCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAGAGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCCCTGCTCAGCGACGCCATCGCGTACATCCAGGAGCTGGAGGCCCGGCTCAGGGGCGACGCGCCCGTGCCCGCGCGGGCGGATGGGCCGGCCGTGGAGGTGAAGGCAATGCAGGACGAGGTGGTGCTGCGCGTGACCACGCCCCTGGACGAGCACCCCATCTCCAGGGTGTTCCACGCCATGAGGGAATCCCAGATCAGCGTCGTGGCGTCGGACGTGGCGGTGTCGGACGACGCCGTCACGCACACGCTCATGGTGCGGTCGGCCGGGCCGGAGCGGCTCACGGCGGAGACGGTGCTCGCGGCGATGTCGCGGGGGGTGAGCGTCACCACTCCCTCCCCGTGACAGTGCAGTGCAGTAAGTTAGTACTGTACTACCAGTACAGCAGTA CTCGTGCGTACGGTATAGCTGCCAACTGTTATCAGTCTTTGAATCCTAGGTAGGTGCAACTCCTTGTGACTTCAAGCAATTAATGGAAGCAAAGATGATATTTATATATTTCTTTTCCTGATTTATATGTTAGATTTAGATCATTGTCTTAAAAAAATGTTAGATTAAGATGCATGTACACAAATTTAGCCTGAAGCATCGTATAGGGGTTTTCCATACTTTGATATGGCAATGACATGTCC ]
[-] EMBL CB619496 [ GATCTCCAAGATGGACAAGGCGTCCCTGCTCAGCGACGCCATCGCGTACATCCAGGAGCTGGAGGCCCGGCTCAGGGGCGACGCGCCCGTGCCCGCGCGGGCGGATGGGCCGGCCGTGGAGGTGAAGGCAATGCAGGACGAGGTGGTGCTGCGCGTGACCACGCCCCTGGACGAGCACCCCATCTCCAGGGTGTTCCACGCCATGAGGGAATCCCAGATCAGCGTCGTGGCGTCGGACGTGGCGGTGTCGGACGACGCCGTCACGCACACGCTCATGGTGCGGTCGGCCGGGCCGGAGCGGCTCACGGCGGAGACGGTGCTCGCGGCGATGTCGCGGGGGGTGAGCGTCACCACTCCCTCCCCGTGACAGTGCAGTGC AGTTAGTACTGTACTACCAGTACAGCAGTACTCCTCGTGCGTACGGTATAGCTGCCAACTGTTATCAGTCTTTGAATCCTAGGTAGGTGCAACTCCTTGTGACTTCAAGCAATTAATGGAAGCAAAGATGATATTTATATATTTATTTTCCTGATTTATATGTTAGATTTAGATCATTGTCTTAAAAAAATGTTAGATTAAGATGCATGTACACAAATTTAGCCTGAAGCATCGTATAAGGGTTTTCCATACTTTGATATGGCAATGACATGTCCTGGTTGTTGGATAAGCTTTTGTTTTCGCTCAAGGCGTGGGGAGGGAAAAAAAAAAGAGAACTGCTTAGTCACT]
consensusID : consensus_11848#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1023 fasta sequence
[TCTCTCGCCCAGNCCGCGGGGTTACGCACCGTCGTCTTCCTCCCGTGCAAGGGCGGCGTTCTCGAGCTCGGTTCCGTCGTAGCCATCCGCGAGACCCCCGAGGTCTTGCGCGCCATCCAATCTGCCATGCGCGCCGTGCCAGCTCCGCCGGAAGATTTCATGAGAATCTTCGGCAAGGATCTCTCACCCGGCCGACCGTCCCAGCCCATGGGATGCGACGCCCCATGGACGCCGCGGCTCGTTGTCCAAACCACGCCGGTGCGCCCAGCCAAGAAGGAGGTGGTCAAGGCGAAACCAGCCGAGCCCCCCAAGAGCTTGGACTTCTCCAAGGCGAACGTGCAGGAACAGGCCGGCGGCCAGGAGCGGCGGCCGCGGAAGCGTGGGCGCAAGCCGGCGAACGGGCGGGAGGAGCCGCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAGAGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCCCTGCTCAGCGACGCCATCGCGTACATCCAGGAGCTGGAGGCCCGGCTCAGGGGCGACGCGCCCGTGCCCGCGCGGGCGGATGGGCCGGCCGTGGAGGTGAAGGCAATGCAGGACGAGGTGGTGCTGCGCGTGACCACGCCCCTGGACGAGCACCCCATCTCCAGGGTGTTCCACGCCATGAGGGAATCCCAGATCAGCGTCGTGGCGTCGGACGTGGCGGTGTCGGACGACGCCGTCACGCACACGCTCATGGTGCGGTCGGCCGGGCCGGAGCGGCTCACGGCGGAGACGGTGCTCGCGGCGATGTCGCGGGGGGTGAGCGTCACCACTCCCTCCCCGTGACAGTGCAGTGCAGTAAGTTAGTACTGTACTACCAGTACAGCAGTACTCGTGCGTACGGTATAGCTGCCAACTGTTATCAGTCTTTGAATCCTAGGTAGGTGCAACTCCTTGTGACTTCAAGCAATTAATGGAAGCAAAGATGATATTTATATAAAAAAAAGA]
[+] EMBL AU031368 [TCTCTCGCCCAGNCCGCGGGGTTACGCACCGTCGTCTTCCTCCCGTGCAAGGGCGGCGTTCTCGAGCTCGGTTCCGTCGTAGCCATCCGCGAGACCCCCGAGGTCTTGCGCGCCATCCAATCTGCCATGCGCGCCGTGCCAGCTCCGCCGGAAGATTTCATGAGAATCTTCGGCAAGGATCTCTCACCCGGCCGACCGTCCCAGCCCATGGGATGCGACGCCCCATGGACGCCGCGGCTCGTTGTCCAAACCACGCCGGTGCGCCCAGCCAAGAAGGAGGTGGTCAAGGCGAAACCAGCCGAGCCCCCCAAGAGCTTGGACNTCTCCAAGGCGAACGTGCAGGAACAGGCCGGCGG ]
[+] EMBL AU095340 [ GAGAATCTTCGGCAAGGATCTCTCACCCGGCCGACCGTCCCAGCCCATGGGATGCGACGCCCCATGGACGCCGCGGCTCGTTGTCCAAACCACGCCGGTGCGCCCAGCCAAGAAGGNNGTGGTCAAGGCGAAACCAGCNGNGCCCCCCAAGAGCTTGGNCTTCTCCAAGGCGAACGTGCNGGNAC ]
[-] EMBL CB669225 [ TGGGATGCGACGCCCCATGGACGCCGCGGCTCGTTGTCCAAACCACGCCGGTGCGCCCAGCCAAGAAGGAGGTGGTCAAGGCGAAACCAGCCGAGCCCCCCAAGAGCTTGGACTTCTCCAAGGCGAACGTGCAGGAACAGGCCGGCGGCCAGGAGCGGCGGCCGCGGAAGCGTGGGCGCAAGCCGGCGAACGGGCGGGAGGAGCCGCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTGAACCAGAGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCCCTGCTCAGCGACGCCATCGCGTACATCCAGGAGCTGGAGGCCCGGCTCAGGGGCGACGCGCCCGTGCCCGCGCGGGCGGATGGGCCGGCCGTGGAGGTGAAGGCAATGCAGGACGAGGTGGTGCTGCGCGTGACCACGCCCCTGGACGAGCACCCCATCTCCAGGGTGTTCCACGCCATGAGGGAATCCCAGATCAGCGTCGTGGCGTCGGACGTGGCGGTGTCGGACGACGCCGTCACGCACACGCTCATGGTGCGGTCGGCCGGGCCGGAGCGGCTCACGGCGGAGACGGTGCTCGCGGCGATGTCGCGGGGGGTGAGCGTCACCACTCCCTCCCCGTGACAGTGCAGTGCAGTAAGTTAGTACTGTACTACCAGTACAGCAGTACTCGTGCGTACGGTATAGCTGCCAACTGTTATCAGTCTTTGAATCCTAGGTAGGTGCAACTCCTTGTGACTTCAAGCAATTAATGGAAGCAAAGATGATATTTATATAAAAAAAAGA]
consensusID : consensus_11848#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 974 fasta sequence
[GCGGGAGGAGCCGCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTCAACCAGCGCTTCTACGCGCTGCGCGCCGTGGTGCCCAACGTGTCCNAGATGGACAAGGCGTCGCTGCTGGGCGACGCCCTCTCCTACATCAACGAGCTCCGGGGGAAGCTCACGGCGCTGGAGACGGACAAGGAGACGCTGCAGTCGCAGATGGAGTCGCTCAAGAAGGAGCGGGACGCGCGGCCGCCGGCGCCGTCGGGCGGCGGCGGAGACGGCGGGGCGCGGTGCCACGCGGTGGAGATCGAGGCCAAGATCCTTGGGCTGGAGGCCATGATCCGCGTGCAGTGCCACAAGCGGAACCACCCGGCGGCGCGGCTGATGACGGCGCTGCGGGAGCTGGACCTGGACGTGTACCATGCCAGCGTCTCCGTGGTCAAGGACCTCATGATCCAGCAGGTGGCCGTCAAGATGGCCAGCCGCGTCTACTCGCAGGACCAGCTCAACGCCGCGCTCTACACCCGCATCGCCGAGCCTGGCACCGCCGCCCGGTAACTCAACTCTAGCGAGGAAACCCAATCGATATACTCTCTACTCTCCCCAAGCCGGCGTAGCCATGGCCAGAGCTTCAGGAATGCCAAGAAGACGACGAGACGATGATCAAATCATGTTGTTGTTGTTGTAAAATTAAGTTTAAAGATCTGTGTTAGGATGGATGGATGGATGGATGGAGAGGATGATTGATATCAACTCGCAACTCAAGCTGAAGCTGCTGCTGCTGATCGTCGTCTTGTTTTTGATACTGATAGCAGCGGTTGGTATTTCTTTTCTTCCTTTCTTTGTTAGCAGGAAGGAAGGAAGGGAGGAAAGAAATCATCGGCGATATGTTGGTCCTTGTTAATTACTAAACCTAAATATGATAGACTTTGTATATAGGATTTGGTATTGTACCATCATCATGCCAATGAACAAGGGAGGAAGG]
[+] EMBL CA755056 [GCGGGAGGAGCCGCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTCAACCAGCGCTTCTACGCGCTGCGCGCCGTGGTGCCCAACGTGTCCNAGATGGACAAGGCGTCGCTGCTGGGCGACGCCCTCTCCTACATCAACGAGCTCCGGGGGAAGCTCACGGCGCTGGAGACGGACAAGGAGACGCTGCAGTCGCAGATGGAGTCGCTCAAGAAGGAGCGGGACGCGCGGCCGCCGGCGCCGTCGGGCGGCGGCGGAGACGGCGGGGCGCGGTGCCACGCGGTGGAGATCGAGGCCAAGATCCTTGGGCTGGAGGCCATGATCCGCGTGCAGTGCCACAAGCGGAACCACCCGGCGGCGCGGCTGATGACGGCGCTGCGGGAGCTGGACCTGGACGTGTACCATGCCAGCGTCTCCGTGGTCAAGGACCTCATGATCCAGCAGGTGGCCGTCAAGATGGCCAGCCGCGTCTACTCGCAGGACCAGCTCAACGCCGCGCTCTACACCCGCATCGCCGAGCCTGGCACCGCCGCCCGGTAACTCAACTCTNGCGAGGAAACCCNATCGATATACTCTCTACTCTCCCCNAGCCGGCGTAGC ]
[-] EMBL CB632847 [ CCACGCGGTGGAGATCGAGGCCAAGATCCTTGGGCTGGAGGCCATGATCCGCGTGCAGTGCCACAAGCGGAACCACCCGGCGGCGCGGCTGATGACGGCGCTGCGGGAGCTGGACCTGGACGTGTACCATGCCAGCGTCTCCGTGGTCAAGGACCTCATGATCCAGCAGGTGGCCGTCAAGATGGCCAGCCGCGTCTACTCGCAGGACCAGCTCAACGCCGCGCTCTACACCCGCATCGCCGAGCCTGGCACCGCCGCCCGGTAACTCAACTCTAGCGAGGAAACCCAATCGATATACTCTCTACTCTCCCCAAGCCGGCGTAGCCATGGCCAGAGCTTCAGGAATGCCAAGAAGACGACGAGACGATGATCAAATCATGTTGTTGTTGTTGTAAAATTAAGTTTAAAGATCTGTGTTAGGATGGATGGATGGATGGATGGAGAGGATGATTGATATCAACTCGCAACTCAAGCTGAAGCTGCTGCTGCTGATCGTCGTCTTGTTTTTGATACTGATAGCAGCGGTTGGTATTTCTTTTCTTCCTTTCTTTGTTAGCAGGAAGGAAGGAAGGGAGGAAAGAAATCATCGGCGATATGTAGGTCCTTGTTAATTACTAAACCTAAATATGATAGACTTTGTATATAGGATTTGGTATTGTACCATCATCATGGCAATGAACAAGGGAGGAAGG]
[+] EMBL CB632846 [ TGGAGATCGAGGCCAAGATCCTTGGGCTGGAGGCCATGATCCGCGTGCAGTGCCACAAGCGGAACCACCCGGCGGCGCGGCTGATGACGGCGCTGCGGGAGCTGGACCTGGACGTGTACCATGCCAGCGTCTCCGTGGTCAAGGACCTCATGATCCAGCAGGTGGCCGTCAAGATGGCCAGCCGCGTCTACTCGCAGGACCAGCTCAACGCCGCGCTCTACACCCGCATCGCCGAGCCTGGCACCGCCGCCCGGTAACTCAACTCTAGCGAGGAAACCCAATCGATATACTCTCTACTCTCCCCAAGCCGGCGTAGCCATGGCCAGAGCTTCAGGAATGCCAAGAAGACGACGAGACGATGATCAAATCATGTTGTTGTTGTTGTAAAATTAAGTTTAAAGATCTGTGTTAGGATGGATGGATGGATGGATGGAGAGGATGATTGATATCAACTCGCAACTCAAGCTGAAGCTGCTGCTGCTGATCGTCGTCTTGTTTTTGATACTGATAGCAGCGGATGGTATTTCTTTTCTTCCTTTCTTTGTTAGCAGGAAAGAAGGAAGGGAGGAAAGAAATCATCGGCGATATGTTGGTCCTTGTTAATTACTAAACCTAAATATGATAGACTTTGTATATAGGATTTGGTATTGGACCATCATCATGCCAATGAACAAGGGAGG ]
[+] EMBL CB682097 [ AACTCCCTTCTCAAGCTGAAGCTGCTGCTGCTGATCGTCGTCTTGTTTTTGATACTGATAGCAGCGGTTGGTATTTCCTTTCTTCCTTTCTTTGTTAGCAGGAAGGAAGGAAGGGAGGAAAGAAATCATCGGCGATATGTTGGTCCTTGTTAATTACTAAACCTAAATATGATAGACTTTGTATATAGGATTTGGTATTGTACCATCATCATGCCAATGAACAAGGGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11848#0 CATCCACTCCACACCACACGCTTCACTGGTTCCGAGCACTCGCCACCGATACACTCCAGT 60
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 GGCAGCCGAGCTAGCCGAGAGCCAAGCAACTTGCCGTGGCCAATAAGCTCCCGTGAGCTG 120
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 ACGTCTCGTGCTCGACGGCTCGGCGCTATATATAAAAGCGTAGTAAGCTGGTAAAAAATT 180
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 CACAAGGCCACGCGCATCTTGTCTCGGCCAAAAAAAAGAGAGCGCACACGCGGTTGATTT 240
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 GTTTGACCGACGCGCGTAGGCGGAGGCGGCGAGCTAGCGGGGCCGGCGGGCATGTCGTGG 300
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 TCCGAGACGGACGCCGCGCTGTTCGCGGCGGTGCTGGGGCACGACGCGGCGCATCACCTG 360
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 GCCACCACGCCGCCGCACCTCGACGCGCCGGAGGGGTCGCCGTCGTCGGCCGAGCTGCAG 420
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 GCGAGCCTGCACGACCTCGTCGAGCGGCAGGGAGGGGCCTGGACGTACGGCATCTTCTGG 480
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 CAGGAGTCCCGCGGCGCCGGTGCCGCCAGCGGCCGCGCTGCCCGCGCCGTGCTCGGCTGG 540
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 GGCGACGGCCACTGCCGCGACGGTGCCGGACACGGGGAGGTCGGCGCCGCGGAGAGGAGC 600
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 GTGGCGCGGAAGCGCGTGCTGCTGCGGCTGCACGCGCTGTACGGAGGCGGGGATGAGGAT 660
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 GGCGCCGACTACGCGCTCCGGCTGGACCGGGTCACCGGCGCCGAGATGTACTTCCTGGCG 720
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 TCCATGTACTTCTCCTTCCCGGAGGGCTCGGGCGGACCGGGCCGCGCTCTGGCCTCCGGC 780
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 CGCCACGCCTGGGCGGACGTAGACCCCCACCCTTCCGGCTCCGGTAGCGCGCCAGGGTGG 840
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 TACGTTCGCTCGTCTCTCGCCCAGTCCGCGGGGTTACGCACCGTCGTCTTCCTCCCGTGC 900
consensus_11848#1 ------------TCTCTCGCCCAGNCCGCGGGGTTACGCACCGTCGTCTTCCTCCCGTGC 48
consensus_11848#2 ---------------------------GCGGG---AGGAGCCGCTGAACCACGTGGAGGC 30
***** * * *** * * **
consensus_11848#0 AAGGGCGGCGTTCTCGAGCTCGGTTCCGTCGTAGCCATCCGCGAGACCCCCGAGGTCTTG 960
consensus_11848#1 AAGGGCGGCGTTCTCGAGCTCGGTTCCGTCGTAGCCATCCGCGAGACCCCCGAGGTCTTG 108
consensus_11848#2 G-GAGCGGCAGCGGCGGGAGAAGCTCAACCAGCGCT-TCTACGCGCTGCGCGCCGTGGTG 88
* ***** ** * * ** * ** ** ** * * ** ** **
consensus_11848#0 CGCGCCATCCAATCTGCCATGCGCGCCGTGCCAGCTCCGCCGGAAGATTTCATGAGAATC 1020
consensus_11848#1 CGCGCCATCCAATCTGCCATGCGCGCCGTGCCAGCTCCGCCGGAAGATTTCATGAGAATC 168
consensus_11848#2 CCCAACGT---GTCCNAGATGGACAAGGCGTCG---CTGCTGGGCGACGCCCTCT---CC 139
* * * * ** *** * * * * * ** ** ** * * *
consensus_11848#0 TTCGGCAAGGATCTCTCACCCGGCCGACCGTCCCAGCCCATGGGATGCGACGCCCCATGG 1080
consensus_11848#1 TTCGGCAAGGATCTCTCACCCGGCCGACCGTCCCAGCCCATGGGATGCGACGCCCCATGG 228
consensus_11848#2 TACATCAACGAGCTCCGGGGGAAGCTCACGGCGCTGGAGACGGACAAGGAGACGCTGCAG 199
* * *** ** *** * ** * * * * ** ** * * *
consensus_11848#0 ACGCCGCGGCTCGTTGTCCAAACCACGCCGGTGCGCCCAGCCAAGA-------------- 1126
consensus_11848#1 ACGCCGCGGCTCGTTGTCCAAACCACGCCGGTGCGCCCAGCCAAGAAGGAGGTGGTCAAG 288
consensus_11848#2 TCGCAGATGGA-GTCGCTCAAGAAGGAGCGGGACGCGCGGCCGCCGGCGC---------- 248
*** * * ** * *** *** *** * ***
consensus_11848#0 -------------------------GCTTGGACTTCTCCAAGGCGAACGTGCAGGAACAG 1161
consensus_11848#1 GCGAAACCAGCCGAGCCCCCCAAGAGCTTGGACTTCTCCAAGGCGAACGTGCAGGAACAG 348
consensus_11848#2 -------------------------CGTCGGGCGGCGGCGGAGACGGCGGGGCGCGGT-G 282
* ** * * * * ** * * *
consensus_11848#0 GCCGGCGGCCAGGAGCGGCGGCCGCGGAAGCGTGGGCGCAAGCCGGCGA---ACGGGCGG 1218
consensus_11848#1 GCCGGCGGCCAGGAGCGGCGGCCGCGGAAGCGTGGGCGCAAGCCGGCGA---ACGGGCGG 405
consensus_11848#2 CCACGCGGTGGAGATCGA-GGCCA-AGATCCTTGGGCTGGAGGCCATGATCCGCGTGCAG 340
* **** ** ** **** ** * ***** ** * ** ** ** *
consensus_11848#0 GAGGAGCCGCTGAACCACGTGGAGGCGGAGC-GGCAGCGGCG--GGAGAAGCTGAACCAG 1275
consensus_11848#1 GAGGAGCCGCTGAACCACGTGGAGGCGGAGC-GGCAGCGGCG--GGAGAAGCTGAACCAG 462
consensus_11848#2 TGCCACAAGCGGAACCACCCGGCGGCGCGGCTGATGACGGCGCTGCGGGAGCTGGACCTG 400
* ** ******* ** **** ** * ***** * * ***** *** *
consensus_11848#0 AGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCCCTG 1335
consensus_11848#1 AGGTTCTACGCGCTGCGCGCGGTGGTGCCCAAGATCTCCAAGATGGACAAGGCGTCCCTG 522
consensus_11848#2 GACGTGTACCATGCCAGCGTCTCCGTGGTCAAGGACCTCATGATCCAGCAGGTGGCCGTC 460
* *** *** *** **** * ** *** * *** * ** *
consensus_11848#0 CTCAGCGACGCCATCGCGTACATCCAGGA---GCTGGAGGCCCGGCTCAGGGGCGACGCG 1392
consensus_11848#1 CTCAGCGACGCCATCGCGTACATCCAGGA---GCTGGAGGCCCGGCTCAGGGGCGACGCG 579
consensus_11848#2 AAGATGGCCAGCCGCGTCTACTCGCAGGACCAGCTCAACGCCGCGCTCTACACCCGCATC 520
* * * * ** *** ***** *** * *** **** * *
consensus_11848#0 CCCGTGCCCG----CGCGGGCGGATGGGCCGGCCGTGGAGGTGAAGGCAATGCAGGACGA 1448
consensus_11848#1 CCCGTGCCCG----CGCGGGCGGATGGGCCGGCCGTGGAGGTGAAGGCAATGCAGGACGA 635
consensus_11848#2 GCCGAGCCTGGCACCGCCGCCCGGTAACTCAACTCTAGCGAGGAAACCCA-----ATCGA 575
*** *** * *** * * * * * * * * * *** * * ***
consensus_11848#0 GGTGGTGCTGCGCGTGACCACGCCCCTGGA-CGAGCACCCCATCTCCAGGGTGTTCCACG 1507
consensus_11848#1 GGTGGTGCTGCGCGTGACCACGCCCCTGGA-CGAGCACCCCATCTCCAGGGTGTTCCACG 694
consensus_11848#2 TATACTCTCTACTCTCCCCAAGCCGGCGTAGCCATGGCCAGAGCTTCAGGA-ATGCCAAG 634
* * * *** *** * * * * ** * ** **** * *** *
consensus_11848#0 CCATGAGGGAATCCCAGATCAGCGTCGTGGCGTCGGACGTGGCGGTGTCGGACGACGCCG 1567
consensus_11848#1 CCATGAGGGAATCCCAGATCAGCGTCGTGGCGTCGGACGTGGCGGTGTCGGACGACGCCG 754
consensus_11848#2 AAGACGACGAGACGATGATCAA-ATCATGTTGTTGT-TGTTGTAAAATTAAGTTTAAAGA 692
** * ***** ** ** ** * ** * *
consensus_11848#0 TCACGCACACGCTCATGGTGCGGTCGGCCGGGCCGGAGCGGCTCACGGCGGAGACGGTGC 1627
consensus_11848#1 TCACGCACACGCTCATGGTGCGGTCGGCCGGGCCGGAGCGGCTCACGGCGGAGACGGTGC 814
consensus_11848#2 TCTGTGTTAGGATGGATGGATGGATGGATGGAGAGGA-TGATTGATATCA-ACTCGCAAC 750
** * * * * ** ** ** *** * * * * * ** *
consensus_11848#0 TCGCGGCGATGTCGCGGGGGGTGAGCGTCACCACTCCCTCCCCG-TGACAGTGCAGTGCA 1686
consensus_11848#1 TCGCGGCGATGTCGCGGGGGGTGAGCGTCACCACTCCCTCCCCG-TGACAGTGCAGTGCA 873
consensus_11848#2 TCAAGCTGAAGCTGCTGCTGCTGATCGTCGTCTTGTTTTTGATACTGATAGCAGCGGTTG 810
** * ** * ** * * *** **** * * *** ** *
consensus_11848#0 GTAAGTTAGTACTGTACTACCAGTACAGCAGTACTCGTGCGTACGGTATAGCTGCCAACT 1746
consensus_11848#1 GTAAGTTAGTACTGTACTACCAGTACAGCAGTACTCGTGCGTACGGTATAGCTGCCAACT 933
consensus_11848#2 GTATTTCTTTTCTTCCTTTCTTTGTTAGCAGGA--AGGAAGGAAGGGAGGAAAGA-AATC 867
*** * * ** * * ***** * * * * ** * * **
consensus_11848#0 GTTATCAGTCTTTGAATCCTAGGTAGGTGCAACTCCTTGTGACTTCAAGCAATTAATGGA 1806
consensus_11848#1 GTTATCAGTCTTTGAATCCTAGGTAGGTGCAACTCCTTGTGACTTCAAGCAATTAATGGA 993
consensus_11848#2 ATCGGCGATATGTTGGTCCTTGTTAATTACTAAACCTAAATATGATAGACTTTGTATATA 927
* * * * * **** * ** * * * *** * * * * ** *
consensus_11848#0 AGCAAAGATGATATTTATATATTTCTTTTCCTGATTTATATGTTAGATTTAGATCATTGT 1866
consensus_11848#1 AGCAAAGATGATATTTATATAAAAAAAAGA------------------------------ 1023
consensus_11848#2 GG---ATTTGGTATT-GTACCATCATCATGCCAATGAACAAGGGAGGAAGG--------- 974
* * ** **** **
consensus_11848#0 CTTAAAAAAATGTTAGATTAAGATGCATGTACACAAATTTAGCCTGAAGCATCGTATAGG 1926
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 GGTTTTCCATACTTTGATATGGCAATGACATGTCCTGGTTGTTGGATAAGCTTTTGTTTT 1986
consensus_11848#1 ------------------------------------------------------------
consensus_11848#2 ------------------------------------------------------------
consensus_11848#0 CGCTCAAGGCGTGGGGAGGGAAAAAAAAAAGAGAACTGCTTAGTCACT 2034
consensus_11848#1 ------------------------------------------------
consensus_11848#2 ------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||