cluster # 11866

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Oryza sativa
cluster # 11866 cluster # 11866 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11866#0 length = 762 sequences # 9
consensusID : consensus_11866#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 762
fasta sequence
                              [AACCAGCTCCATCCATAGACTTGTTGACTGCTCCCTCGCGATCCCATCTCCGCCGCCGCCGCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGCGCAGCA-GAACGGCGGCGCCGGA-CACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTCCTGGGACAAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGCCTGCGGCCTGCTCTGGGGAGCCGTCCCCCTCGTC-GGCGCCATCTGGATCGCACTGTTTGTGACTATTTCTACT-GGGCTCGTTTACTGGTACTAT-GCATACCTGTTGAAGATTGATGAGGAAGACTTTGGAGGCCATGGAGCACTACTTCAGGAGGGAATGTTTGCCTCTTTCACTCTTTTCCTGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGAGAAGCTCCTCTGATGACATGTTGCCCATGGATGGAAGTTTGTGCACCATGTTTGGTCAGGAAGGAATCA-CCAGAACAGTGTAGATTAAGGGGGCCATTTAGAGCAAACTTTGTATTATGAAAACCGTTAAAGGCAGTAATGTTGTTTCCTTTCAGAGTCCCAATGTAATTTTGATAGTATGGTTTTAACTCAATGAGGTAGAACATTGCTTGTCTGAAAAACGTGCTTACCGAGTTAGAACATTTGTACTGTATCATTCAATTGCATCCAGCCAAT-AGCCTTTCTAACAAAAAAAAAAA]

[+] EMBL AK121048             [AACCAGCTCCATCCATAGACTTGTTGACTGCTCCCTCGCGATCCCATCTCCGCCGCCGCCGCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGCGCAGCA GAACGGCGGCGCCGGA CACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTCCTGGGACAAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGCCTGCGGCCTGCTCTGGGGAGCCGTCCCCCTCGTC GGCGCCATCTGGATCGCACTGTTTGTGACTATTTCTACT GGGCTCGTTTACTGGTACTAT GCATACCTGTTGAAGATTGATGAGGAAGACTTTGGAGGCCATGGAGCACTACTTCAGGAGGGAATGTTTGCCTCTTTCACTCTTTTCCTGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGAGAAGCTCCTCTGATGACATGTTGCCCATGGATGGAAGTTTGTGCACCATGTTTGGTCAGGAAGGAATCA CCAGAACAGTGTAGATTAAGGGGGCCATTTAGAGCAAACTTTGTATTATGAAAACCGTTAAAGGCAGTAATGTTGTTTCCTTTCAGAGTCCCAATGTAATTTTGATAGTATGGTTTTAACTCAATGAGGTAGAACATTGCTTGTCTGAAAAACGTGCTTACCGAGTTAGAACATTTGTACTGTATCATTCAATTGCATCCAGCCAAT                        ]
[+] EMBL AU068975             [            CCATAGACTTGTTGACTGCTCCCTCGCGATCCCATCTCCGCCGCCGCCGCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGC NAGCA GAACGGCGGCGCCGGA CACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTCCTGGGACAAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGCCTGCNGCCTGCTCTNGGGAACCGTCCCCCTCGTC GGCGCCATCTNGATCGCACTGTTTGTGACTATTTCTACTGGGGCTCGTTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB680514             [                                           CCATCTCCGCCGCCGCCGCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGCGCAGCA GAACGGCGGCGCCGGA CACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTCCTGGGACAAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGCCTGCGGCCTGCTCTGGGGAGCCGTCCCCCTCGTC GGCGCCATCTGGATCGCACTGTTTGTGACTATTTCTACT GGGCTCGTTTACTGGTACTAT GCATACCTGTTGAAGATTGATGAGGAAGACTTTGGAGGCCATGGAGCACTACTTCAGGAGGGAATGTTTGCCTCTTTCACTCTTTTCCTGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGAGAAGCTCCTCTGATGACATGTTGCCCATGGATGGAAGTTTGTGCACCATGTTTGGTCAGGAAGGAATCA CCAGAACAGTGTAGATTAAGGGGGCCATTTAGAGCAAACTTTGTATTATGAAAACCGTTAAAGGCAGTAATGTTGTTTCCTTTCAGAGTCCCAATGTAATTTTGATAGTATGGGGTTAACTCAATGAGGTAGAACATTGCTTGTCTG                                                                                    ]
[+] EMBL OSR28081A            [                                               CTCCGCCGCCGCCGCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGC NAGCAGGAACGGCGGCGCCGGANCACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTCCTGGGACAAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGCCTGCGGACTGCTCTGGGGAGCCGTCCCCCTCGTCGGGCGCCATCTGGATCGCACTGTTTGTGACTATTTCTACT GGGCTCGTTTACTGGTACTATGGNATACCTGTTGAAGATTGATGAGGAAGACTTTGGAGGCCATGGAGg                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB680513             [                                                   GCCGCCGCCGCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGCGCAGCA GAACGCCGGCGCCGGA CACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTCCTGGGACAAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGCCTGCGGCCTGCTCTGGGGAGCCGTCCCCCTCGTC GGCGCCATCTGGATCGCACTGTTTGTGACTATTTCTACT GGGCTCGTTTACTGGTACTAT GCATACCTGTTGAAGATTGATGAGGAAGACTTTGGAGGCCATGGAGCACTACTTCAGGAGGGAATGTTTGCCTCTTTCACTCTTTTCCTGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGAGAAGCTCCTCTGATGACATGTTGCCCATGGATGGAAGTTTGTGCACCATGTTTGGTCAGGAAGGAATCA CCAGAACAGTGTAGATTAAGGGGGCCATTTAGAGCAAACTTTGTATTATGAAAACCGTTAAAGGCAGTAATGTTGTTTCCTTTCAGAGTCCCAATGTAATTTTGATAGTATGGTTTTAACTCAATGAGGTAGAACAT                                                                                              ]
[+] EMBL CB000689             [                                                                                                                                                                                                                                                                                                                         ACT GGGCTCGTTTACTGGTACTAT GCATACCTGTTGAAGATTGATGAGGAAGACTTTGGAGGCCATGGAGCACTACTTCAGGAGGGAATGTTTGCCTCTTTCACTCTTTTCCTGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGGGAAGCTCCTCTGATGACATGTTGCCCATGGATGGAAGTTTGTGCACCATGTTTGGTCAGGAAGGAATCA CCAGAACAGTGTAGATTAAGGGGGCCATTTAGAGCAAACTTTGTATTATGAAAACCGTTAAAGGCAGTAATG                                                                                                                                                               ]
[+] EMBL BI803957             [                                                                                                                                                                                                                                                                                                                                                                                                                             TTTCACTCTTTTCCTGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGAGAAGCTCCTCTGATGACATGTTGCCCATGGATGGAAGTTTGTGCACCATGTTTGGTCAGGAAGGAATCACCCAGAACAGTGTAGATTAAGGGGGCCATTTAGAGC AACTTTGTATTATGAAAACCGTTAAAGGCAGTAATGTTGTTTCCTTTCAGAGTCCCAATGTAATTTTGATAGTATGGTTTTAACTCAATGAGGTAGAACATTGCTTGTCTGAAAAACGTGCTTACCGAGTTAGAACATTTGTACTGTAaaaaaa                                         ]
[+] EMBL AU162334             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             TATACAGTTTGGTTCACTTTTGAGAAGCTCCTCTGATGACATGTTGCCCATGGATGGAAGTTTGTGCACCATGTTTGGTCAGGAAGGAATCA CCAGAACAGTGTAGATTAAGGGGGCCATTTAGAGCAAACTTTGTATTATGAAAACCGTTAAAGGCAGTAATGTTGTTTCCTTTCAGAGTCCCAATGTAATTTTGATAGTATGGNTTTAACTCAATGAGGNAGAACATTGCTTGTCTGAAAAACGTGCTTACCGAGTTAGAACATTTGTACTGTATCATTCAATTGCNTCCAGCCAATAAGCCTTTCTAACAAAAAAAAAAA]
[+] EMBL BI796609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGCACCATGTTTGGTCAGGAAGGAATCA CCAGAACAGTGTAGATTAA GGGGCCATTTAGAGCAAACTTTGTATTATGAAAACCGTTAAA GCAGTAATGTTGTTTCCTTTCAGAGTCCCAATGTAATTTTGATAGTATGGTTTTAACTCAATGAGGTAGAACATTGCTTGTCTGAAAAACGTGCTTACCGAGTTAGAACATTTGTACTGTATCATTCAATTGCATCCAGCCATA AGCCTTTCTAACAAAAAA     ]




>consensus_11866#0
AACCAGCTCCATCCATAGACTTGTTGACTGCTCCCTCGCGATCCCATCTCCGCCGCCGCC
GCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGC
GCAGCAGAACGGCGGCGCCGGACACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTC
CTGGGACAAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGC
CTGCGGCCTGCTCTGGGGAGCCGTCCCCCTCGTCGGCGCCATCTGGATCGCACTGTTTGT
GACTATTTCTACTGGGCTCGTTTACTGGTACTATGCATACCTGTTGAAGATTGATGAGGA
AGACTTTGGAGGCCATGGAGCACTACTTCAGGAGGGAATGTTTGCCTCTTTCACTCTTTT
CCTGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGAGAAGCTCCTCTGATGAC
ATGTTGCCCATGGATGGAAGTTTGTGCACCATGTTTGGTCAGGAAGGAATCACCAGAACA
GTGTAGATTAAGGGGGCCATTTAGAGCAAACTTTGTATTATGAAAACCGTTAAAGGCAGT
AATGTTGTTTCCTTTCAGAGTCCCAATGTAATTTTGATAGTATGGTTTTAACTCAATGAG
GTAGAACATTGCTTGTCTGAAAAACGTGCTTACCGAGTTAGAACATTTGTACTGTATCAT
TCAATTGCATCCAGCCAATAGCCTTTCTAACAAAAAAAAAAA
clustalw multiple alignements is not computed in this case