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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11877#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1326 fasta sequence
[GGCACTGGCTCGTTTTATGGCTTGCAGGAGCTCGCGTCGCCGCCGCCCCAGCTGCCGCCCTTGTCTCAGGCGGCGGCGCATCAGTGGACGGCGCCGCTTCCCGGTGGAGGTGGAGCGGGGGGAGCGTCGTCCTCGCCGCCGTCGTCGTCGTCGCCGCACGGCGTGCAGGTCTCTGCCGAGCAGGTGGTGGCGCAGCAGGGACAGGGGGTCGGCGCGCCGCCGGCGAGGGGGTCGAGGAAGCGGACGCGGGCGTCGCGGCGCGCGCCGACGACGGTGCTGACCACCGACACCTCCAACTTCCGCGCCATGGTGCAGGAGTTCACCGGCATCCCCTCGCCGCCCTTCGCCGGGCCACCCGCGCGCTCGCGGTTCGACCACCTCTTCCCCGCCCCCTCCTCCCTCCGCTCCGCCGCTACCGCCGCCGGCGGCGGGAACCCGTCCTCGCTCCCGGCCTACCTCCTCCGCCCGTTCGCGCAGAAGCACCACCCTTCCCCGTTCCCGCCTTTCCCCTCGCCCTCCACGTCCTCGCCGTCGCCGTCCAACATTGCCATTGCAACCTCCACCGCCGCCGCAACCACGGCGGCGGTGGCGGCACCCGGCGACAGGTACCACCTCGCGTCGGCGCCGTCGTCCTCTCTCCTAGGGATGCAGGATCACGGCGGCAGTTACCTCTCCTTCCAGAGCCACCTCGGCGGCGCCCAGCTCGGCGCCAGCGACGACGTCAAGTACACCGCGCACACCATGTTCGACGCTCCCGGCAGCGACCTAGCCCCGCGGCCGCCGCCGCAG-AGGCTGCAGGATCCGGCGGCCGGCTTCCTCGGCCTCACGCATGGCATCATGGGCGCCGACGGGTCGCACATGCACCAGCAACAACGAAGCCGCGGCCACGGCCACGGCGGCGACGAGCTGTCCGGCGTGGTCGGGGGCGCGTCCATGACCCGGAGCGTCGGCGGCGGCGGCAAGAAGACGACCTTCTCGTCCGGCGCCGGCGCGGCGGCCCACGCAGCGCCTCAACTGGAGCACAATGCGGAGAGCACGTCGGTCACCGTCGCCGCAGCGCCGACACCTTCGTCGGCGGCGGCGACGGCGGCGATGAGAACGCAATCCGTGGACTCGTGGATTTGTACATCGGAGTAGGTCAATTCACTCGCTTCATTATATTCCAAGAGCAGATTGGCTTGTAGTAGTAAAGCTCATTTAGCTAGTAGCTTAATTTCATTTGGTTCTTTAATATCTTATTAATCTCTACTACTCCTTTGGGTGTTTAATTCCCCTATTTGCATATGCTCTTTGTGTAGATCGATCAAACCAAACAACAAGATCATA]
[+] EMBL AK109792 [GGCACTGGCTCGTTTTATGGCTTGCAGGAGCTCGCGTCGCCGCCGCCCCAGCTGCCGCCCTTGTCTCAGGCGGCGGCGCATCAGTGGACGGCGCCGCTTCCCGGTGGAGGTGGAGCGGGGGGAGCGTCGTCCTCGCCGCCGTCGTCGTCGTCGCCGCACGGCGTGCAGGTCTCTGCCGAGCAGGTGGTGGCGCAGCAGGGACAGGGGGTCGGCGCGCCGCCGGCGAGGGGGTCGAGGAAGCGGACGCGGGCGTCGCGGCGCGCGCCGACGACGGTGCTGACCACCGACACCTCCAACTTCCGCGCCATGGTGCAGGAGTTCACCGGCATCCCCTCGCCGCCCTTCGCCGGGCCACCCGCGCGCTCGCGGTTCGACCACCTCTTCCCCGCCCCCTCCTCCCTCCGCTCCGCCGCTACCGCCGCCGGCGGCGGGAACCCGTCCTCGCTCCCGGCCTACCTCCTCCGCCCGTTCGCGCAGAAGCACCACCCTTCCCCGTTCCCGCCTTTCCCCTCGCCCTCCACGTCCTCGCCGTCGCCGTCCAACATTGCCATTGCAACCTCCACCGCCGCCGCAACCACGGCGGCGGTGGCGGCACCCGGCGACAGGTACCACCTCGCGTCGGCGCCGTCGTCCTCTCTCCTAGGGATGCAGGATCACGGCGGCAGTTACCTCTCCTTCCAGAGCCACCTCGGCGGCGCCCAGCTCGGCGCCAGCGACGACGTCAAGTACACCGCGCACACCATGTTCGACGCTCCCGGCAGCGACCTAGCCCCGCGGCCGCCGCCGCAG AGGCTGCAGGATCCGGCGGCCGGCTTCCTCGGCCTCACGCATGGCATCATGGGCGCCGACGGGTCGCACATGCACCAGCAACAACGAAGCCGCGGCCACGGCCACGGCGGCGACGAGCTGTCCGGCGTGGTCGGGGGCGCGTCCATGACCCGGAGCGTCGGCGGCGGCGGCAAGAAGACGACCTTCTCGTCCGGCGCCGGCGCGGCGGCCCACGCAGCGCCTCAACTGGAGCACAATGCGGAGAGCACGTCGGTCACCGTCGCCGCAGCGCCGACACCTTCGTCGGCGGCGGCGACGGCGGCGATGAGAACGCAATCCGTGGACTCGTGGATTTGTACATCGGAGTAGGTCAATTCACTCGCTTCATTATATTCCAAGAGCAGATTGGCTTGTAGTAGTAAAGCTCATTTAGCTAGTAGCTTAATTTCATTTGGTTCTTTAATATCTTATTAATCTCTACTACTCCTTTGGGTGTTTAATTCCCCTATTTGCATATGCTCTTTGTGTAGATCGATCAAACCAAACAACAAGATCATA]
[+] EMBL AU173844 [ CTCCAACTTCCGCGCCATGGTGCAGGAGTTCACCGGCATCCCCTCGCCGCCCTTCGCCGGGCCACCCGCGCGCTCGCGGTTCGACCACCTCTTCCCCGCCCCCTCCTCCCTCCGCTCCGCCGCTACCGCCGCCGGCGGCGGGAACCCGTCCTCGCTCCCGGCCTACCTCCTCCGCCCGTTCGCGCAGAAGCACCACCCTTCCCCGTTCCCGCCTTTCCCCTCGCCCTCCACGTCCTCGCCGTCGCCGTCCAACATTGCCATTGCAACCTCCACCGCCGCCGCAACCACGGCGGCGGTGGCGGCACCCGGCGACAGGTACCACCTCGCGTCGGCGCCGTCGTCCTCTCTCCTAGGGATGCAGGATCACGGCGGCAGTTACCTCTCCTTCCAGAGCCACCTNGGCGGNGCCCAGCTCGGNGCCA ]
[+] EMBL AU081585 [ CGAAGNAGGCTGCAGGATCCGGCGGCCGGCTTCCTCGGCCTCACGCATGGCATCATGGGCGCCGACGGGTCGCACATGCACCAGCAACAACGAAGCCGCGGCCACGGCCACGGCGGCGACGAGCTGTCCGGCGTGGTCGGGGGCGCGTCCATGACCCGGAGCGTCGGCGGCGGCGGCAAGAAGACGACCTTCTCGTCCGGCGCCGGCGCGGCGGCCCACGCAGCGCCTCAACTGGAGCACAATGCGGAGAGCACGTCGGTCACCGTCGCCGCAGCGCCGACACCTTCGTCGGCGGCGGCGACGGCGGCGATGAGAACGCAATCCGTGGACTCGTGGATTTGTACATCGGAGTAGGTCAATTCACTCGCTTCATTATATTCCAAGAGCAGATTGGCTTGTAGTAGTAA ]
consensusID : consensus_11877#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1127 fasta sequence
[CACTCCAGCCATGGGCGACGCGGCGGGCGCATGGCGGCGCACTGGGCGGCGCTCTACGGCGGCGGAGTTAATGGTGGCGCGGCGGCGGGGGCGGAGGGAACGGTGTCGAGCCCGACCTCCGGGGGCTCGCCGGTGGCGGGGGGGAGCCCGACGAGGGGGGGCGCGGCGGCGCTGCCGGGGATCGAGGGCGGGCGCGTCGCGAAGCCCGCGCGGCGGCGCTCCAGGGCGTCGCGGCGCGCGCCCGTCACGCTGCTCAACACCGACACCTCCAACTTCCGCGCCATGGTGCAGCAGTTCACCGGCATCCCCACCCCGCCCTACGCCACCGCCGCCGCCGCCGGCGGCCCGGTCATCAGCTTCGGCGCCGGCGAGTACGGCGGCGGCGCCATGCCCGTCCGCCCGTCCCCGACACCGGCGTCCGTCATGTCGTTCGACCACCTCGGCCACCACCACCGCCAGGCGGCGTCGTCGCTGCAGAGCCAGCTGTTCCGGCCACAGCACCAGCACCACCACCAGTACGGCGGCGGCGGCGACGTCGGGTACGGCGGCGGCGGCGGCGACATGTTTCTCCACGGGTTCGAGTCGTCGTCGGCGGAGGAGAGGCTGCTGCTGCAGAGCATCCAGGCGGCGCAGATGCTGCCGGCGGCGAGGCCGACGACCACCTCGGCTAACAACGCTAATGGCTACAACTTCGGATGATTAATTAGCCAACCTCGCACTTGATTAGTTTGGGTAATTAAGGTAAGCATCAAGTGCTAATT--AGAGAGAGAGAAATTGAATTAAAGATGCCATTAGTTAAGGCTCTTTAATTACATGATCAACCAAGCATCATATGGATTGCTTGATTATTTCTCCTCTTTTGTCTGCACCATGATGTTGTTTTAATTTTAATTTTTAAGGTTTTATTTTTGTTGGCCTTTGCTGTAGAGAGATATACCCAGATTAGCAAGGCTGATTAAGTTCTTTATTAATACAGTAATTAGTGGTAGCTTAGCTAGATGTGAAATGGAATGAAAAGCATGTAAATATTTTCTCAACACAGTACTTTGGTTAATTTTGGTGTGTAGCAAGAGCACTTTTGGTGATCACCACTAGTGCAAAAACTTGATATTTAGTGAGGAATCTTT]
[+] EMBL AK068418 [CACTCCAGCCATGGGCGACGCGGCGGGCGCATGGCGGCGCACTGGGCGGCGCTCTACGGCGGCGGAGTTAATGGTGGCGCGGCGGCGGGGGCGGAGGGAACGGTGTCGAGCCCGACCTCCGGGGGCTCGCCGGTGGCGGGGGGGAGCCCGACGAGGGGGGGCGCGGCGGCGCTGCCGGGGATCGAGGGCGGGCGCGTCGCGAAGCCCGCGCGGCGGCGCTCCAGGGCGTCGCGGCGCGCGCCCGTCACGCTGCTCAACACCGACACCTCCAACTTCCGCGCCATGGTGCAGCAGTTCACCGGCATCCCCACCCCGCCCTACGCCACCGCCGCCGCCGCCGGCGGCCCGGTCATCAGCTTCGGCGCCGGCGAGTACGGCGGCGGCGCCATGCCCGTCCGCCCGTCCCCGACACCGGCGTCCGTCATGTCGTTCGACCACCTCGGCCACCACCACCGCCAGGCGGCGTCGTCGCTGCAGAGCCAGCTGTTCCGGCCACAGCACCAGCACCACCACCAGTACGGCGGCGGCGGCGACGTCGGGTACGGCGGCGGCGGCGGCGACATGTTTCTCCACGGGTTCGAGTCGTCGTCGGCGGAGGAGAGGCTGCTGCTGCAGAGCATCCAGGCGGCGCAGATGCTGCCGGCGGCGAGGCCGACGACCACCTCGGCTAACAACGCTAATGGCTACAACTTCGGATGATTAATTAGCCAACCTCGCACTTGATTAGTTTGGGTAATTAAGGTAAGCATCAAGTGCTAATT AGAGAGAGAGAAATTGAATTAAAGATGCCATTAGTTAAGGCTCTTTAATTACATGATCAACCAAGCATCATATGGATTGCTTGATTATTTCTCCTCTTTTGTCTGCACCATGATGTTGTTTTAATTTTAATTTTTAAGGTTTTATTTTTGTTGGCCTTTGCTGTAGAGAGATATACCCAGATTAGCAAGGCTGATTAAGTTCTTTATTAATACAGTAATTAGTGGTAGCTTAGCTAGATGTGAAATGGAATGAAAAGCATGTAAATATTTTCTCAACACAGTACTTTGGTTAATTTTGGTGTGTAGCAAGAGCACTTTTGGTGATCACCACTAGTGCAAAAACTTGATATTTAGTGAGGAATCTTT]
[+] EMBL BQ529312 [ GCACTTGATTAGTTTGGGTAATTAAGGTAAGCATCAAGTGCTAATTAGAGAGAGAGAGAAATTGAATTAAAGATGCCATTAGTTAAGGCTCTTTAATTACATGATCAACCAAGCATCATATGGATTGCTTGATTATTTCTCCTCTTTTGTCTGCACCATGATGTTGTTTTAATTTTAATTTTTAAGGTTTTATTTTTGTTGGCCTTTGCTGTAGAGAGATATACCCAGATTAGCAAGGCTGATTAAGTTCTTTATTAATACAGTAATTAGTGGTAGCTTAGCTAGATGTGAAATGGAATGAAAAGCATGTAAATATTTTC ]
[+] EMBL CF196436 [ ag AGAGAGAGAGAAATTGAATTAAAGATGCCATTAGTTAAGGCTCTTTAATTACATGATCAACCAAGCATCATATGGATTGCTTGATTATTTCTCCTCTTTTGTCTGCACCATGATGTTGTTTTAATTTTAATTTTTAAGGTTTTATTTTTGTTGGCCTTTGCTGTAGAGAGATATACCCAGATTAGCAAGGCTGATTAAGTTCTTTATTAATACAGTAATTAGTGGTAGCTTAGCTAGATGTGAAATGGAATGAAAAGCATGTAAATATTTTCTCAACACAGTACTTTGGTTAATTTTGGCGTGTAGCAAGAGCACTTTTGTTGATCACCACTAGTGCAAAAACTTGATATTTAa ]
consensusID : consensus_11877#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1059 fasta sequence
[CCTCCCTTCGTCGCCGTCACTGCCCACCACCGCCGGCCTCGACGCCGCCGGTGGCGGCGACCAAGAATTCTCCTCCTACCAGCACCACCAGAGTCTCTTCCTGCCATCCTCCTCCTCCTCCTACCTCGACTCACCCTTCCATGGCCTCCTCCACACCTCCTCCTCATCCTCCGCCACCATGTCCCCCTCGCAGGCGCCGCCGCCGCACCCTCCCCCTCCGGCGCCGACGTCCAACAACAAGCCGCCCAAGAAGCGGCCCAGAGCGTCCCGCCGCCCGCCCACCACCGTGCTCACCACCGACACCTCCAACTTCCGCGCCATGGTGCAGGAGTTCACCGGCTTCCCCGCCCCGCCCTTCGCCGCCGCGCCGCCACCCGCCGTCCGCCCTCGCCTCCTGGGCGGCGTCGGCGGCGGCCACCAGCTCCCTCCCTTCTTGCTTCGCCCCTCCCCGCTCAAGTACACGCACAGCCACCCCACGCCGCCGCCGCCGCCGCCGCTACACCACCAGGCTTGCACCACCACCTCCTTCCTCGGCAACGCCGCCGCCGCCACCACCAGCACGAGCTCTCTCGTCGACGCGCTCGCGCTGTTCGCCAAGAGCAACGTGATGGTGGCGCCGCCGCCGCCGCCGCCAACCTCCGCCGCCGCCTCGTCCAGCGCCGATCAGTACCACCACCACCACGGCATGACGATGGGTGGTCTATTCAACCCGTTCGACGACTACGAGGCCGCGGCGGCGGCCGCCGCCGCGGAAGGCGACAAGGTTGTGCACGGCGGCGCCGGCCATGGCGGCTTCTTCTCCCCCTTGGGCGCCGGCGCCGGCGACGACAAGTACGATCGGCACTAGCGCGCGCCGCCGCGTGTA-CGTATCTCTCTCGATCTCTAAAACCTCTGTGTGTTTTTGCGTGTGGATCGAGAGATCAATCAATCGATCGATCGATGGAGAAACTAAGAGAAGCATTTGGATTATGGATAGCTAAGCTAAGTTAATGAAGCTGAGCTAGCTTCTACTACTTGGCCACTGCAACTGTGTTGGCATTTGTTGTGAGGAGTTGATTA]
[+] EMBL AK107546 [CCTCCCTTCGTCGCCGTCACTGCCCACCACCGCCGGCCTCGACGCCGCCGGTGGCGGCGACCAAGAATTCTCCTCCTACCAGCACCACCAGAGTCTCTTCCTGCCATCCTCCTCCTCCTCCTACCTCGACTCACCCTTCCATGGCCTCCTCCACACCTCCTCCTCATCCTCCGCCACCATGTCCCCCTCGCAGGCGCCGCCGCCGCACCCTCCCCCTCCGGCGCCGACGTCCAACAACAAGCCGCCCAAGAAGCGGCCCAGAGCGTCCCGCCGCCCGCCCACCACCGTGCTCACCACCGACACCTCCAACTTCCGCGCCATGGTGCAGGAGTTCACCGGCTTCCCCGCCCCGCCCTTCGCCGCCGCGCCGCCACCCGCCGTCCGCCCTCGCCTCCTGGGCGGCGTCGGCGGCGGCCACCAGCTCCCTCCCTTCTTGCTTCGCCCCTCCCCGCTCAAGTACACGCACAGCCACCCCACGCCGCCGCCGCCGCCGCCGCTACACCACCAGGCTTGCACCACCACCTCCTTCCTCGGCAACGCCGCCGCCGCCACCACCAGCACGAGCTCTCTCGTCGACGCGCTCGCGCTGTTCGCCAAGAGCAACGTGATGGTGGCGCCGCCGCCGCCGCCGCCAACCTCCGCCGCCGCCTCGTCCAGCGCCGATCAGTACCACCACCACCACGGCATGACGATGGGTGGTCTATTCAACCCGTTCGACGACTACGAGGCCGCGGCGGCGGCCGCCGCCGCGGAAGGCGACAAGGTTGTGCACGGCGGCGCCGGCCATGGCGGCTTCTTCTCCCCCTTGGGCGCCGGCGCCGGCGACGACAAGTACGATCGGCACTAGCGCGCGCCGCCGCGTGTA CGTATCTCTCTCGATCTCTAAAACCTCTGTGTGTTTTTGCGTGTGGATCGAGAGATCAATCAATCGATCGATCGATGGAGAAACTAAGAGAAGCATTTGGATTATGGATAGCTAAGCTAAGTTAATGAAGCTGAGCTAGCTTCTACTACTTGGCCACTGCAACTGTGTTGGCATTTGTTGTGAGGAGTTGATTA]
[+] EMBL AU181033 [ CACGGCGGCGCCGGCCATGGCGGCTTCTTCTCCCCCTTGGGCGCCGGCGCCGGCGACGACAAGTACGATCGGCACTAGCGCGCGCCGCCGCGTGTACCGTATCTCTCTCGATCTCTAAAACCTCTGTGTGTTTTTGCGTGTGGATCGAGAGATCAATCAATCGATCGATCGATGGAGAAATTAAGAGAAGCATTTGGATTATGGATAGCTAAGCTAAGTTAATGAAGCTGAGCTAGCTTCTACTACTTGGCCACTGCAACTGTGTTGGCATTTGTTGTGAG ]
consensusID : consensus_11877#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 497 fasta sequence
[GGCTNCAGGATCCGGCGGCCGGCTTCCTCGGCNTCACGCATGGCATCATGGGCGCCGACGGGTCGCACATGCACCAGCAACAACGAAGCCGCGGCCACGGCCACGGCGGCGACGAGCTGTCCGGCNTGGTCGGGGGCGCGTCCATGACCCGGAGCGTCGGCGGCGGCGGCAAGAAGACGACCTTCTCGTCCGGCGCCGGCGCGGCGGCCCACGCAGCGCCTCAACTGGAGCACAATGCGGAGAGCACGTCGGTCACCGTCGCCGCAGCGCCGACACCTTCGTCGGCGGCGGCGACGGCGGCGATGAGAACGCAATCCGTGGACTCGTGGATTTGTACATCGGAGTAGGTCAATTCACTCGCTTCATTATATTCCAAGAGCAGATTGGCTTGTAGTAGTAAAGCTCATTTAGCTAGTAGCTTAATTTCATTTGGTTCTTTAATATCTTATTAATCTCTACTACTCCTTTGGGTGTTTAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU081584 [GGCTNCAGGATCCGGCGGCCGGCTTCCTCGGCNTCACGCATGGCATCATGGGCGCCGACGGGTCGCACATGCACCAGCAACAACGAAGCCGCGGCCACGGCCACGGCGGCGACGAGCTGTCCGGCNTGGTCGGGGGCGCGTCCATGACCCGGAGCGTCGGCGGCGGCGGCAAGAAGACGACCTTCTCGTCCGGCGCCGGCGCGGCGGCCCACGCAGCGCCTCAACTGGAGCACAATGCGGAGAGCACGTCGGTCACCGTCGCCGCAGCGCCGACACCTTCGTCGGCGGCGGCGACGGCGGCGATGAGAACGCAATCCGTGGACTCGTGGATTTGTACATCGGAGTAGGTCAATTCACTCGCTTCATTATATTCCAAGAGCAGATTGGCTTGTAGTAGTAAAGCTCATTTAGCTAGTAGCTTAATTTCATTTGGTTCTTTAATATCTTATTAATCTCTACTACTCCTTTGGGTGTTTAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11877#0 GGCACTGGCTCGTTTTATGGCTTGCAGGAGCTCGCGTCGCCGCCGCCCCAGCTGCCGCCC 60
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 ------------------------------------------------------------
consensus_11877#2 ------------------------------------------------------------
consensus_11877#0 TTGTCTCAGGCGGCGGCGCATCAGTGGACGGCGCCGCTTCCCGGTGGAGGTGGAGCGGGG 120
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 ------------------------------------------------------------
consensus_11877#2 ------------------------------------------------------------
consensus_11877#0 GGAGCGTCGTCCTCGCCGCCGTCGTCGTCGTCGCCGCACGGCGTGCAGGTCTCTGCCGAG 180
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 ------------------------------------------------------------
consensus_11877#2 ------------------------------------------------------------
consensus_11877#0 CAGGTGGTGGCGCAGCAGGGACAGGGGGTCGGCGCGCCGCCGGCGAGGGGGTCGAG-GAA 239
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 -----------CACTCCAGCCATGGGCGACGCGGCGGGCGCATGGCGGCGCACTGG-GCG 48
consensus_11877#2 --------------------------CCTCCCTTCGTCGCCGTCACTGCCCACCACCGCC 34
consensus_11877#0 GCGGACGCGGGCGTCGCGGCGCGCGCCGACGACGGTGCTGACCACCGACACCTCCAACTT 299
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 GCGCTCTACGGCGGCGGAGTTAATGGTGGCGCGGCGGCGGG--GGCGGAGGGAACGGTGT 106
consensus_11877#2 GGCCTCGACGCCGCCGGTGGCGGCGACCAAGAATTCTCCTCCTACCAGCACCACCAGAGT 94
consensus_11877#0 CCGCGCCATGGTGCAGGAGTTCACCGGCATCCCCTCGCCGCCCTTCGCCGGGCCACCCGC 359
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 CGAGCCCGACCTCCGGGGGCTCGCCGGTGGCGGGGGGGAGCCCGACGAGGGGGGGCGCG- 165
consensus_11877#2 CTCTTCCTGCCATCCTCCTCCTCCTCCTACCTCGACTCACCCTTCCATGGCCTCCTCCAC 154
consensus_11877#0 GCGCTCGCGGTTCGACCACCTCTTCCCCGCCCCCTCCTCCCTCCGCTCCGCCGCTACCGC 419
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 GCGGCGCTGCCGGGGATCGAGGGCGGGCGCGTCGCGAAGCCCGCGCGGCGGCGCTCCAGG 225
consensus_11877#2 ACCTCCTCCTCATCCTCCGCCACCATGTCCCCCTCGCAGGCGCCGCCGCCGCACCCTCCC 214
consensus_11877#0 CGCCGGCGGCGGGAACCCGTCCTCGCTCCCGGCCTACCTCCTCCGCCCGTTCGCGCAGAA 479
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 GCGTCGCGGCGCGCGCCCGTCACGCTGCTCAACACCGACACCTCCAACTTCCGCGCCATG 285
consensus_11877#2 CCTCCGGCGCCGACGTCCAACAACAAGC----CGCCCAAGAAGCGGCCCAGAGCGTCCCG 270
consensus_11877#0 GCACCACCCTTCCCCGTTCCCGCCTTTCCCCTCGCCCTCCACGTCCTCGCCGTCGCCGTC 539
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 GTGCAGCAGTTCACCGGCATCCCCACCCCGCCCTACGCCACCGCCGCCGCCGCCGGCGGC 345
consensus_11877#2 CCGC--CCGCCCACCACCGTGCTCACCACCGACACCTCCAACTTCCGCGCCATGGTGCAG 328
consensus_11877#0 CAACATTGCCATTGCAACCTCCACCGCCGCCGCAACCACGGCGGCGGTGGCGGCACCCGG 599
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 CCGGTCATCAGCTTCGGCGCCGGCGAGTACGGCGGCGGCGCCATGCCCGTCCGCCCGTCC 405
consensus_11877#2 GAGTTCACCGGCTTCCCCGCCC-CGCCCTTCGCCGCCGCGCCGCCACCCGCCGTCCGCCC 387
consensus_11877#0 CGACAGGTACCACCTCGCGTCGGCGCCGTCGTCCTCTCTCCTAGGGATGCAGGATCACGG 659
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 CCGACACCGGCGTCCGTCATGTCGTTCGACCACCTCGGCCACCACCACCGCCAGGCGGCG 465
consensus_11877#2 TCGCCTCCTGGG--CGGCGTCGGCGGCGGCCACCAGCTCCCTCCCTTCTTGCTTCGCCCC 445
consensus_11877#0 CGGCAGTTACCTCTCCTTCCAGAGCCACCTCGGCGGCGCCCAGCTCGGCGCCAGCGACGA 719
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 TCGTCGCTGCAGAGCCAGCTGTTCCGGCCACAGCACCAGC-ACCACCACCAGTACGGCGG 524
consensus_11877#2 TCCCCGCTCAAGTACACGCACAGCCACCCCACGCCGCCGCCGCCGCCGCCGCTACACCAC 505
consensus_11877#0 CGT--CAAGTACACCGCGCACACCATGTTCGACGCTCCCGGCAGCGACCTAGCCCCGCGG 777
consensus_11877#3 ------------------------------------------------------------
consensus_11877#1 CGG--CGGCGACGTCGGGTACGGCGGCGGCGGCGGCGACATGTTTCTCCACGGGTTCGAG 582
consensus_11877#2 CAGGCTTGCACCACCACCTCCTTCCTCGGCAACGCCGCCGCCGCCACCACCAGCACGAGC 565
consensus_11877#0 CCG-CCGCCGCAGAGGCTGCAGGATCCGGCGGCCG-GCTTCCTCGGCCTCACGCATGGCA 835
consensus_11877#3 --------------GGCTNCAGGATCCGGCGGCCG-GCTTCCTCGGCNTCACGCATGGCA 45
consensus_11877#1 TCG-TCGTCGGCGGAGGAG-AGGCTGCTGCTGCAG-AGCATCCAGGCGGCGCAGATGCTG 639
consensus_11877#2 TCTCTCGTCGACGCGCTCGCGCTGTTCGCCAAGAGCAACGTGATGGTGGCGCCGCCGCCG 625
* * * * ** * * *
consensus_11877#0 TCATGGGCGCCGACGGGTCGCACATGCACCAGCAACAACGA----AGCCGCGGCCACGGC 891
consensus_11877#3 TCATGGGCGCCGACGGGTCGCACATGCACCAGCAACAACGA----AGCCGCGGCCACGGC 101
consensus_11877#1 CCGGCGGCGAGGCCGACGACCACCTCGGCTAACAACGCTAAT---GGCTACAACTTCGGA 696
consensus_11877#2 CCGCCGCCAACCTCCGCCGCCGCCTCGTCCAGCGCCGATCAGTACCACCACCACCACGGC 685
* * * * * * * * * * * * * * * ***
consensus_11877#0 CACGGCGGCGACGAGCTGTCCGGCGTGGTCGGGGGCGCGTCCATGACCCGGAGCGTCG-G 950
consensus_11877#3 CACGGCGGCGACGAGCTGTCCGGCNTGGTCGGGGGCGCGTCCATGACCCGGAGCGTCG-G 160
consensus_11877#1 TGATTAATTAGCCAACC-TCGCACTTGATTAGT--TTGGGTAATTAAGGTAAGCATCAAG 753
consensus_11877#2 ATGACGATGGGTGGTCTATTCAACCCGTTCGACGACTACGAGGCCGCGGCGGCGGCCG-C 744
* * * * * *
consensus_11877#0 CGGCGGCGGCAAGAAGACGACCTTCTCGTCCGGCGCCGGC-GCGGCGGCCCACGCAGCGC 1009
consensus_11877#3 CGGCGGCGGCAAGAAGACGACCTTCTCGTCCGGCGCCGGC-GCGGCGGCCCACGCAGCGC 219
consensus_11877#1 TGCTAATTAGAGAGAGAGAAATTGAATTAAAGATGCCATTAGTTAAGGCTCTTTAATTAC 813
consensus_11877#2 CGCCGCGGAAGGCGACAAGGTTGTGCACGGCGGCGCCGGCCATGGCGGCTTCTTCTCCCC 804
* * * * *** *** *
consensus_11877#0 CTCAACTG--GAGCACAATGCGGAGAGCACGTCGGTCACCGTCGCCGCAGCGCCGACACC 1067
consensus_11877#3 CTCAACTG--GAGCACAATGCGGAGAGCACGTCGGTCACCGTCGCCGCAGCGCCGACACC 277
consensus_11877#1 ATGATCAACCAAGCATCATATGGATTGC---TTGATTATTTCTCCTCTTTTGTCTGCACC 870
consensus_11877#2 CTTGGGCGC-CGGCGCCG-GCGACGACAAGTACGATCGGCACTAGCGC-GCGCCGCCGCG 861
* ** * * * * * * *
consensus_11877#0 TTCGTCGGCGGCGGCGACGGCGGCGATGAGAACGCAATCCGTG--GACTCGTGGATTTGT 1125
consensus_11877#3 TTCGTCGGCGGCGGCGACGGCGGCGATGAGAACGCAATCCGTG--GACTCGTGGATTTGT 335
consensus_11877#1 ATGAT--GTTGTTTTAATTTTAATTTTTAAGGTTTTATTTTTGTTGGCCTTTG---CTGT 925
consensus_11877#2 TGTAC-----GTATCTCTCTCGATCTCTAAAACC---TCTGTG--TGTTTTTGCGTGTGG 911
* * * ** ** **
consensus_11877#0 ACATCGGAGTAGGTCAATTCACTCGCTTCATTATATTCC---AAGAGCAGATTGGCTTGT 1182
consensus_11877#3 ACATCGGAGTAGGTCAATTCACTCGCTTCATTATATTCC---AAGAGCAGATTGGCTTGT 392
consensus_11877#1 AGAGAGATATACCCAGATTAGCAAGGCTGATTAAGTTCTTT-ATTAATACAGTAATTAGT 984
consensus_11877#2 ATCGAGAGATCAATCAATCGATCGATCGATGGAGAAACTAAGAGAAGCATTTGGATTATG 971
* * * ** * * * * * *
consensus_11877#0 AGTAGTAAAGCTCATTTAGCTAGTAGCTTAATTTCATTTGGTTCTTTAAT-ATCTTATTA 1241
consensus_11877#3 AGTAGTAAAGCTCATTTAGCTAGTAGCTTAATTTCATTTGGTTCTTTAAT-ATCTTATTA 451
consensus_11877#1 GGTAGCTTAGCTAGATGTGAAATGGAATGAAAAGCATGTAAATATTTTCTCAACACAGTA 1044
consensus_11877#2 GATAGCTAAGCTAAGTTAATGA--AGCTGAGCTAGCTTCTACTACTTGGCCACTGCAACT 1029
*** **** * * * * * * ** * *
consensus_11877#0 ATCTCTACTACTCCTTTGGGTGTTTAATTCCCCTATTTGCATATGCTCTTTGTGTAGATC 1301
consensus_11877#3 ATCTCTACTACTCCTTTGGGTGTTTAAAAAAAAAAAAAAAAAAAAA-------------- 497
consensus_11877#1 CTTTGGTTAATTTTGGTGTGTAGC-AAGAGCACTTTTGGTGATCACCACTAGTGCAAAAA 1103
consensus_11877#2 GTGTTGGCATTTGTTGTGAGGAGTTGATTA------------------------------ 1059
* * * ** * *
consensus_11877#0 GATCAAACCAAACAACAAGATCATA 1326
consensus_11877#3 -------------------------
consensus_11877#1 CTTGATATTTAGTGAGGAATCTTT- 1127
consensus_11877#2 -------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||