These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11902#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3151 fasta sequence [GGGGTATGGCTATTCAGAAATTCTAAAAACCTCGATGCGCTACCATACTACAGGAGGAAGTACTTCACCTTTGGTCGGGAAAACAGAAAAGATTTCAAGTTCTATGGCATCGCTTTGGAGATATTTTTCTCCTTCCTAAGTTCTGTGATAATCTTTCAGATAATGATACCGATATCACTATACATCACCATGGAGTTAGTCAGAGTGGGGCAGTCATACTTTATGATTGGAGATACACGGATGTATGACAGTAGTTCAGGTTCAAGATTTCAATGCCGGTCCTTGAATATCAATGAAGATCTCGGTCAAATACGTTACATATTTTCTGATAAAACGGGTACCTTGACACAAAACAAGATGGAGTTTCATCAAGCCAGCATCTACGGGAAGAACTATGGGAGCCCCTTGCAGGTCACTGGTGACTCATCTTATGAAATAAGCACAACAGAGTCATCGAGACAGCAAGGCAGTAAGTCCAAGTCAGGAGTCAATGTTGATGCAGAACTCATAGCACTTCTGAGTCAACCATTGGTTGGAGAGGAAAGACTTTCTGCCCATGATTTTTTTCTTACTTTAGCTGCATGCAATACAGTCATTCCAGTCAGCACAGAAAATTCTCTCGATTTGGTTAATGAAATAAATGAGATAGGCAGAATTGATTACCAGGGTGAATCACCTGATGAGCAGGCCTTAGTAACTGCAGCTTCTGCTTATGGATATACGCTTGTGGAAAGGACAACTGGCCACATTGTTGTTGATGTTCAGGGGGAGAAGATAAGGCTGGATGTTCTTGGTCTCCATGAATTTGACAGCGTGAGAAAAAGGATGTCTGTCGTTGTACGATTTCCAGACAACATTGTGAAGGTTCTTGTTAAGGGTGCTGATACTTCAATGCTTAGCATTTTGAGGAGAGAAGATGATGATGAACTTCACAATTCTTTGCATGCTAAAATTAGAGAAACTACAGAAAACCACTTGTCAGGTTACTCATCAGAGGGTTTACGAACTTTAGTAATTGGTTCAAAGAACCTGACTGATGCAGAATTTGGTGAGTGGCAAGAAAGGTATGAAGAAGCCAGCACCTCCATGACAGAGAGATCAGCAAAGCTCCGACAGGCGGCAGCTCTTGTTGAGTGCAATCTGACTCTTCTTGGTGCAACTGGAATTGAAGATAAGTTGCAGGATGGTGTTCCTGAGGCCATTGAGTCTCTCCGGCAGGCTGGAATCAAGGTTTGGGTTCTCACCGGAGATAAGCAAGAAACTGCTATATCGATTGGTCTGTCATGTAGACTATTGACTCAAAATATGCATTTGATTGTTATAAATGGATCCTCAGAGTTTGAGTGCAGGCGCCTTCTAGCTGATGCTAAAGCCAAATTTGGAATAAAGTCATCTGATTCTGGGAGGGATTGTCAAGATATCGAACATACGCACAATGGTGACGTTTCTAAGTTGAGGACCTCTAATGGTCACATGTCTGAAAGTGGCATACATAACTTCGAGCTGACTGGAGTTATTGCAAGTGACAAGTCAGAATACTCTGAGAAAGTGGCAAATTTTGCTGACACTGATCTAGCATTGGTAATTGATGGGAGCTCCCTGGTGTATATTTTAGAGAAGGATCTTGAATCAGAGTTGTTTGATCTGGCGACTTCCTGTAAAGTTGTTATCTGCTGCCGTGTTGCTCCACTACAAAAGGCTGGAATTGTTGATTTGATTAAAAGCAGAACAAGTGACATGACCCTGGCAATTGGTGATGGGGCAAATGATGTTTCAATGATACAGATGGCAGATGTTGGTGTTGGAATATGTGGTCAAGAAGGTCGTCAAGCAGTGATGGCATCAGATTTTGCCATGGGACAGTTCCGCTTTCTGAAGAGATTACTTCTTGTACATGGACACTGGAATTATCAGCGTATTGCATACATGATCCTCTACAATTTTTACCGAAATGCTGTTTTTGTGCTAATGTTGTTCTGGTATATCTTGCATACAGCATATTCTGCAACTCTTGCATTAACAGATTGGAGTAGTGTTTTCTATTCCCTTATCTATACGTCAATTCCCACAGTGGTAGTTGGCATTCTGGACAAGGACTTGAGTCATAATACTCTACTTCATTATCCGAGACTATATGAAACAGGGCTTCAGAATGAGGGCTACAACTTGACGCTCTTCTGGATCACAATGCTAGATACCTTGTGGCAAAGCCTTGTCCTTTTCTATGTTCCCTTCTTCACATACAATATCAGTACAATGGACATATGGAGTATGGGAAGCTTGTGGACGATTGCTGTGGTTATACTTGTCAATATTCATCTGGCCATGGATATCCAACGTTGGGTGCTTATAACCCATCTTGCTGTATGGGGCTCTATAGCTGCAACATTTTTGTGCATGGTGTTAATAGATTCTATTCCAATATTCCCTAACTATGGGACAATATACAATATGGCTGCTTCAAGAACTTATTGGCTTAGTGTTTGCCTTATAATAGTCCTAGGCTTGCTTCCTCGGTTTCTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATAGCAAGAGAAGCTGAGTTATTAAAAAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGTGATATCAGCTGACAACAATGGTTCGGCGCAGTTGCTCTGTGATCCCAGTTTGCGGGTTATGTTGATTCAATTGTTGAGCTGATTTTTGCCCATTTTTTTGAAGAGGCTGAAAGATGAGATGAGGCGGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGGGGCCAAGTAATCAAGAAATGACAAATGTACAGATATGGGAAAGGGATACATACACTC-TGTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACATAGATACAAAATTCTTTTTGCCAATCTTTTGTATTACTTGATTATATGTTAACCATTTTTCTTTTTCTTCCCTCCTCGTCAAGGTTTTAGATGGAGACTTAGTGGTGTGTCCAAATGGAATTTTACGCTTTACACGGTCACAAGATTGATCTCCTTTCGTGACCTATATTCATACTCTTGCTAAATTTGACACCAAAAAAAGNGGCCGGAATTCGTATCAGCTACGATACGTGGCCC] [+] EMBL AU166262 [GGGGTATGGCTATTCAGAAATTCTAAAAACCTCGATGCGCTACCATACTACAGGAGGAAGTACTTCACCTTTGGTCGGGAAAACAGAAAAGATTTCAAGTTCTATGGCATCGCTTTGGAGATATTTTTCTCCTTCCTAAGTTCTGTGATAATCTTTCAGATAATGATACCGATATCACTATACATCACCATGGAGTTAGTCAGAGTGGGGCAGTCATACTTTATGATTGGAGATACACGGATGTATGACAGTAGTTCAGGTTCAAGATTTCAATGCCGGTCCTTGAATATCAATGAAGATCTCGGTCAAATACGTTACATATTTTCTGATAAAACGGGTACCTTGACACAAAACAAGATGGAGTTTCATCAAGCCAGCATCTACGGGAAGAACTATGGGAGCC ] [+] EMBL AK063540 [ TTTCAAGTTCTATGGCATCGCTTTGGAGATATTTTTCTCCTTCCTAAGTTCTGTGATAATCTTTCAGATAATGATACCGATATCACTATACATCACCATGGAGTTAGTCAGAGTGGGGCAGTCATACTTTATGATTGGAGATACACGGATGTATGACAGTAGTTCAGGTTCAAGATTTCAATGCCGGTCCTTGAATATCAATGAAGATCTCGGTCAAATACGTTACATATTTTCTGATAAAACGGGTACCTTGACACAAAACAAGATGGAGTTTCATCAAGCCAGCATCTACGGGAAGAACTATGGGAGCCCCTTGCAGGTCACTGGTGACTCATCTTATGAAATAAGCACAACAGAGTCATCGAGACAGCAAGGCAGTAAGTCCAAGTCAGGAGTCAATGTTGATGCAGAACTCATAGCACTTCTGAGTCAACCATTGGTTGGAGAGGAAAGACTTTCTGCCCATGATTTTTTTCTTACTTTAGCTGCATGCAATACAGTCATTCCAGTCAGCACAGAAAATTCTCTCGATTTGGTTAATGAAATAAATGAGATAGGCAGAATTGATTACCAGGGTGAATCACCTGATGAGCAGGCCTTAGTAACTGCAGCTTCTGCTTATGGATATACGCTTGTGGAAAGGACAACTGGCCACATTGTTGTTGATGTTCAGGGGGAGAAGATAAGGCTGGATGTTCTTGGTCTCCATGAATTTGACAGCGTGAGAAAAAGGATGTCTGTCGTTGTACGATTTCCAGACAACATTGTGAAGGTTCTTGTTAAGGGTGCTGATACTTCAATGCTTAGCATTTTGAGGAGAGAAGATGATGATGAACTTCACAATTCTTTGCATGCTAAAATTAGAGAAACTACAGAAAACCACTTGTCAGGTTACTCATCAGAGGGTTTACGAACTTTAGTAATTGGTTCAAAGAACCTGACTGATGCAGAATTTGGTGAGTGGCAAGAAAGGTATGAAGAAGCCAGCACCTCCATGACAGAGAGATCAGCAAAGCTCCGACAGGCGGCAGCTCTTGTTGAGTGCAATCTGACTCTTCTTGGTGCAACTGGAATTGAAGATAAGTTGCAGGATGGTGTTCCTGAGGCCATTGAGTCTCTCCGGCAGGCTGGAATCAAGGTTTGGGTTCTCACCGGAGATAAGCAAGAAACTGCTATATCGATTGGTCTGTCATGTAGACTATTGACTCAAAATATGCATTTGATTGTTATAAATGGATCCTCAGAGTTTGAGTGCAGGCGCCTTCTAGCTGATGCTAAAGCCAAATTTGGAATAAAGTCATCTGATTCTGGGAGGGATTGTCAAGATATCGAACATACGCACAATGGTGACGTTTCTAAGTTGAGGACCTCTAATGGTCACATGTCTGAAAGTGGCATACATAACTTCGAGCTGACTGGAGTTATTGCAAGTGACAAGTCAGAATACTCTGAGAAAGTGGCAAATTTTGCTGACACTGATCTAGCATTGGTAATTGATGGGAGCTCCCTGGTGTATATTTTAGAGAAGGATCTTGAATCAGAGTTGTTTGATCTGGCGACTTCCTGTAAAGTTGTTATCTGCTGCCGTGTTGCTCCACTACAAAAGGCTGGAATTGTTGATTTGATTAAAAGCAGAACAAGTGACATGACCCTGGCAATTGGTGATGGGGCAAATGATGTTTCAATGATACAGATGGCAGATGTTGGTGTTGGAATATGTGGTCAAGAAGGTCGTCAAGCAGTGATGGCATCAGATTTTGCCATGGGACAGTTCCGCTTTCTGAAGAGATTACTTCTTGTACATGGACACTGGAATTATCAGCGTATTGCATACATGATCCTCTACAATTTTTACCGAAATGCTGTTTTTGTGCTAATGTTGTTCTGGTATATCTTGCATACAGCATATTCTGCAACTCTTGCATTAACAGATTGGAGTAGTGTTTTCTATTCCCTTATCTATACGTCAATTCCCACAGTGGTAGTTGGCATTCTGGACAAGGACTTGAGTCATAATACTCTACTTCATTATCCGAGACTATATGAAACAGGGCTTCAGAATGAGGGCTACAACTTGACGCTCTTCTGGATCACAATGCTAGATACCTTGTGGCAAAGCCTTGTCCTTTTCTATGTTCCCTTCTTCACATACAATATCAGTACAATGGACATATGGAGTATGGGAAGCTTGTGGACGATTGCTGTGGTTATACTTGTCAATATTCATCTGGCCATGGATATCCAACGTTGGGTGCTTATAACCCATCTTGCTGTATGGGGCTCTATAGCTGCAACATTTTTGTGCATGGTGTTAATAGATTCTATTCCAATATTCCCTAACTATGGGACAATATACAATATGGCTGCTTCAAGAACTTATTGGCTTAGTGTTTGCCTTATAATAGTCCTAGGCTTGCTTCCTCGGTTTCTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATAGCAAGAGAAGCTGAGTTATTAAAAAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGTGATATCAGCTGACAACAATGGTTCGGCGCAGTTGCTCTGTGATCCCAGTTTGCGGGTTATGTTGATTCAATTGTTGAGCTGATTTTTGCCCATTTTTTTGAAGAGGCTGAAAGATGAGATGAGGCGGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGGGGCCAAGTAATCAAGAAATGACAAATGTACAGATATGGGAAAGGGATACATACACTC TGTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACATAGATACAAAATTCTTTTTGCCAATCTTTTGTATTACTTGATTATATGTTAACCATTTTTCTTTTTCTTCCCTCCTCGTCAAGGTTTTAGATGGAGACTTAGTGGTGTGTCCAAATGGAATTTTACGCTTTACACGGTCACAAGATTGATCTCCTTTCGTGACCTATATTCA ] [+] EMBL CF308953 [ gagtagaaAACTCTTGCATTAACAGATTGGAGTAGTGTTTTCTATTCCCTTATCTATACGT AATTCCCACAGTGGTAGTTGGCATTCTGGACAAGGACTTGAGTCATAATACTCTACTTCATTATCCGAGACTATATGAAACAGGGCTTCAGAATGAGGGCTACAACTTGACGCTCTTCTGGATCACAATGCTAGATACCTTGTGGCAAAGCCTTGTCCTTTTCTATGTTCCCTTCTTCACATACAATATCAGTACAATGGACATATGGAGTATGGGAAGCTTGTGGACGATTGCTGTGGTTATACTTGTCAATATTCATCTGGCCATGGATATCCAACGTTGGGTGCTTATAACCCATCTTGCTGTATGGGGCTCTATAGCTGCAACATTTTTGTGCATGGTGTTAATAGATTCTATTCCAATATTCCCTAACTATGGGACAATATACAATATGGCTGCTTCAAGAACTTATTGGCTTAGTGTTTGCCTTATAATAGTCCTAGGCTTGCTTCCTCGGTTTCTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATAGCAAGAGAAGCTGAGTTATTAAAAAAGCT ] [+] EMBL D43439 [ GTGTTTGCCTTATAATAGTCCTAGGCTTGCTTCCTCGGTTTCTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATAGCAAGAGAAGCTGAGTTATTAAAAAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGTGATATCAGCTGACAACAATGGTTCGGCGCAGTTGCTCTGTGATCCCAGTTTGCGGGTTATGTTGATTCAATTGTTGAGCTGATTTTTGCCCATTTTTTTGAAGAGGCTGAAAGATGAGATGAGGCGGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCT ] [+] EMBL AA751624 [ TTTTGAAGAGGCTGAAAGATGAGATGAGGCGGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCANACAGCGTCGTCCTTCGGGGGCCAAGTAATCAAGAAATGACAAATGTACAGATATGGGAAAGGGATACATACACTC TGTATTTTAAGGTANATTTTGTGGTTAGGAAATAAATAGGTACATANATACAAAATTCTTTTTGCCAATCTTTTGTATTACTTGATTATATGTTAACCATTTTTCTTTTTCTTCCCTCCTCGTCAAGGTTTTAGATGGANACTTAGTGGTGTGTCCAAATGGAATTTTACGCTTTACACGGTCACAANATTGATCTCCTTTCGTGACCTATATTCATACTCTTGCTAAATTTGACAC ] [+] EMBL OS38014 [ GAAGAGGCTGNAAGATGAGATGAGGCGGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGGGGCCAAGTAATCAAGAAATGACAAATGTACAGATATGGGAAAGGGATACATACACTCGTGTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACATAGATACAAAATTCTTTTTGCCAATCTTTTGTATTACTTGATTATATGTTAACCATTTTACTGTGGCTT CCNCCTCGTCAAGGTTTTAGATGGAGACTTAGTGGTGTGT CAAATGGAA TTTACGCTTTACACGGTCACAAGA TCAGCT CTTTCGTGACCTATATGCATACTCTGGCTAAACTTGACACCAAAAAAAGNGGCCGGAATTCGTATCAGCTACGATACGTGGCCC] consensusID : consensus_11902#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 711 fasta sequence [GCTGCTTCAAGAACTTATTGGCTTAGTGTTTGCCTTATAATAGTCCTAGGCTTGCTTCCTCGGTTTCTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATAGCAAGAGAAGCTGAGTTATTAAAAAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGTGATATCAGCTGACAACAATGGTTCGGCGCAGTTGCTCTGTGATCCCAGTTTGCGGGTTATGTTGATTCAATTGTTGAGCTGATTTTTGCCCATTTTTTTGGTAAGTTCTGTTCATCAATTTACACGGTGCATCATTTGATTTAGGGCAAGTGTTACCTAGTCATGTATTATTTGTCTCGAGAAGTGCAGTAGTGCTGACCTGTCAGTTGTGCCTGTTTCTCCTTTATCTATGGTCCAATGAGCACAGAAGTAAGATATACGAATTCTGGTTGCAGAAGAGGCTGAAAGATGAGATGAGGCGGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGGGGCCAAGTAATCAAGAAATGGAC-AATGTACAGATATGGGAAAGGGATACATACACTCTGTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACATAGATACAAAATTCTTTTTGCCAATCTTTTGTATTACTTGATTATATGTTAACCATTTTTCTTTTTCTTCAAAAAA] [+] EMBL CA755940 [GCTGCTTCAAGAACTTATTGGCTTAGTGTTTGCCTTATAATAGTCCTAGGCTTGCTTCCTCGGTTTCTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATAGCAAGAGAAGCTGAGTTATTAAAAAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGTGATATCAGCTGACAACAATGGTTCGGCGCAGTTGCTCTGTGATCCCAGTTTGCGGGTTATGTTGATTCAATTGTTGAGCTGATTTTTGCCCATTTTTTTGGTAAGTTCTGTTCATCAATTTACACGGTGCATCATTTGATTTAGGGCAAGTGTTACCTAGTCATGTATTATTTGTCTCGAGAAGTGCAGTAGTGCTGACCTGTCAGTTGTGCCTGTTTCTCCTTTATCTATGGTCCAATGAGCACAGAAGTAAGATATACGAATTCTGGTTGCAGAAGAGGCTGAAAGATGAGATGAGGCGGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGGGGCCAAGTAATCAAGAAATGGAC AATGTACAGATATGGGAAAGGGATACATACACTCTGTATTTTAAG ] [-] EMBL CF308954 [ AAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGTGATATCAGCTGACAACAATGGTTCGGCGCAGTTGCTCTGTGATCCCAGTTTGCGGGTTATGTTGATTCAATTGTTGAGCTGATTTTTGCCCATTTTTTTGGTAAGTTCTGTTCATCAATTTACACGGTGCATCATTTGATTTAGGGCAAGTGTTACCTAGTCATGTATTATTTGTCTCGAGAAGTGCAGTAGTGCTGACCTGTCAGTTGTGCCTGTTTCTCCTTTATCTATGGTCCAATGAGCACAGAAGTAAGATATACGAATTCTGGTTGCAGAAGAGGCTGAAAGATGAGATGAGGCGGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGGGGCCAAGTAATCAAGAAAT GACAAATGTACAGATATGGGAAAGGGATACATACACTCTGTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACATAGATACAAAATTCTTTTTGCCAATCTTTTGTATTACTTGATTATATGTTAACCATTTTTCTTTTTCTTCAAAAAA] consensusID : consensus_11902#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 533 fasta sequence [CCAGTTTCGGGTTTATGTTGATTCCATTGTTGAGCTGATTTTTGCCCATGTTTTGTTGAAGTAAGATATACGAATTCTGGTTCAGAAGAGCTGAAAGATGAGATGAGGCGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGGGGCCCAGTAATCACAGAAATGACCAATGTACAGATATGGGAAAGGGATACATACACCTCTGTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACACTAGATACCAAATTCTTTTTGCCCATCTTTTGTATTACTTGATTATATGTTAACCCTTTTTCTTTTTCTTCCCTCCTCGCTCCAGGTTTTAGATGGAGACTTAGTGGTGTGTCCCAATGGAATTTTACGCTTTACACGGTCACAAGATTGATCTCCTTTCGTGACCTATATTCATACTCTTGCTAAATTTGACACCCGTGACCATTTGAACTTTGACCGGCGAGCTGTTTCNATTGTAAATTTCTTCTTTAAAAAAAAAAAA] [+] EMBL BM038374 [CCAGTTTCGGGTTTATGTTGATTCCATTGTTGAGCTGATTTTTGCCCATGTTTTGTTGAAGTAAGATATACGAATTCTGGTTCAGAAGAGCTGAAAGATGAGATGAGGCGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGGGGCCCAGTAATCACAGAAATGACCAATGTACAGATATGGGAAAGGGATACATACACCTCTGTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACACTAGATACCAAATTCTTTTTGCCCATCTTTTGTATTACTTGATTATATGTTAACCCTTTTTCTTTTTCTTCCCTCCTCGCTCCAGGTTTTAGATGGAGACTTAGTGGTGTGTCCCAATGGAATTTTACGCTTTACACGGTCACAAGATTGATCTCCTTTCGTGACCTATATTCATACTCTTGCTAAATTTGACACCCGTGACCATTTGAACTTTGACCGGCGAGCTGTTTCNATTGTAAATTTCTTCTTTAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11902#0 GGGGTATGGCTATTCAGAAATTCTAAAAACCTCGATGCGCTACCATACTACAGGAGGAAG 60 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TACTTCACCTTTGGTCGGGAAAACAGAAAAGATTTCAAGTTCTATGGCATCGCTTTGGAG 120 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ATATTTTTCTCCTTCCTAAGTTCTGTGATAATCTTTCAGATAATGATACCGATATCACTA 180 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TACATCACCATGGAGTTAGTCAGAGTGGGGCAGTCATACTTTATGATTGGAGATACACGG 240 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ATGTATGACAGTAGTTCAGGTTCAAGATTTCAATGCCGGTCCTTGAATATCAATGAAGAT 300 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 CTCGGTCAAATACGTTACATATTTTCTGATAAAACGGGTACCTTGACACAAAACAAGATG 360 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GAGTTTCATCAAGCCAGCATCTACGGGAAGAACTATGGGAGCCCCTTGCAGGTCACTGGT 420 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GACTCATCTTATGAAATAAGCACAACAGAGTCATCGAGACAGCAAGGCAGTAAGTCCAAG 480 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TCAGGAGTCAATGTTGATGCAGAACTCATAGCACTTCTGAGTCAACCATTGGTTGGAGAG 540 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GAAAGACTTTCTGCCCATGATTTTTTTCTTACTTTAGCTGCATGCAATACAGTCATTCCA 600 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GTCAGCACAGAAAATTCTCTCGATTTGGTTAATGAAATAAATGAGATAGGCAGAATTGAT 660 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TACCAGGGTGAATCACCTGATGAGCAGGCCTTAGTAACTGCAGCTTCTGCTTATGGATAT 720 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ACGCTTGTGGAAAGGACAACTGGCCACATTGTTGTTGATGTTCAGGGGGAGAAGATAAGG 780 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 CTGGATGTTCTTGGTCTCCATGAATTTGACAGCGTGAGAAAAAGGATGTCTGTCGTTGTA 840 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 CGATTTCCAGACAACATTGTGAAGGTTCTTGTTAAGGGTGCTGATACTTCAATGCTTAGC 900 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ATTTTGAGGAGAGAAGATGATGATGAACTTCACAATTCTTTGCATGCTAAAATTAGAGAA 960 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ACTACAGAAAACCACTTGTCAGGTTACTCATCAGAGGGTTTACGAACTTTAGTAATTGGT 1020 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TCAAAGAACCTGACTGATGCAGAATTTGGTGAGTGGCAAGAAAGGTATGAAGAAGCCAGC 1080 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ACCTCCATGACAGAGAGATCAGCAAAGCTCCGACAGGCGGCAGCTCTTGTTGAGTGCAAT 1140 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 CTGACTCTTCTTGGTGCAACTGGAATTGAAGATAAGTTGCAGGATGGTGTTCCTGAGGCC 1200 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ATTGAGTCTCTCCGGCAGGCTGGAATCAAGGTTTGGGTTCTCACCGGAGATAAGCAAGAA 1260 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ACTGCTATATCGATTGGTCTGTCATGTAGACTATTGACTCAAAATATGCATTTGATTGTT 1320 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ATAAATGGATCCTCAGAGTTTGAGTGCAGGCGCCTTCTAGCTGATGCTAAAGCCAAATTT 1380 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GGAATAAAGTCATCTGATTCTGGGAGGGATTGTCAAGATATCGAACATACGCACAATGGT 1440 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GACGTTTCTAAGTTGAGGACCTCTAATGGTCACATGTCTGAAAGTGGCATACATAACTTC 1500 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GAGCTGACTGGAGTTATTGCAAGTGACAAGTCAGAATACTCTGAGAAAGTGGCAAATTTT 1560 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GCTGACACTGATCTAGCATTGGTAATTGATGGGAGCTCCCTGGTGTATATTTTAGAGAAG 1620 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GATCTTGAATCAGAGTTGTTTGATCTGGCGACTTCCTGTAAAGTTGTTATCTGCTGCCGT 1680 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GTTGCTCCACTACAAAAGGCTGGAATTGTTGATTTGATTAAAAGCAGAACAAGTGACATG 1740 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ACCCTGGCAATTGGTGATGGGGCAAATGATGTTTCAATGATACAGATGGCAGATGTTGGT 1800 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GTTGGAATATGTGGTCAAGAAGGTCGTCAAGCAGTGATGGCATCAGATTTTGCCATGGGA 1860 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 CAGTTCCGCTTTCTGAAGAGATTACTTCTTGTACATGGACACTGGAATTATCAGCGTATT 1920 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GCATACATGATCCTCTACAATTTTTACCGAAATGCTGTTTTTGTGCTAATGTTGTTCTGG 1980 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TATATCTTGCATACAGCATATTCTGCAACTCTTGCATTAACAGATTGGAGTAGTGTTTTC 2040 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TATTCCCTTATCTATACGTCAATTCCCACAGTGGTAGTTGGCATTCTGGACAAGGACTTG 2100 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 AGTCATAATACTCTACTTCATTATCCGAGACTATATGAAACAGGGCTTCAGAATGAGGGC 2160 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TACAACTTGACGCTCTTCTGGATCACAATGCTAGATACCTTGTGGCAAAGCCTTGTCCTT 2220 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TTCTATGTTCCCTTCTTCACATACAATATCAGTACAATGGACATATGGAGTATGGGAAGC 2280 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 TTGTGGACGATTGCTGTGGTTATACTTGTCAATATTCATCTGGCCATGGATATCCAACGT 2340 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 ------GCTGCTTCAAGAACTTATTGGCTTAGTGTTTGCCTTATAATAGTCCTAGGCTTG 54 consensus_11902#0 TGGGTGCTTATAACCCATCTTGCTGTATGGGGCTCTATAGCTGCAACATTTTTGTGCATG 2400 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 CTTCCTCGGTTTCTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATA 114 consensus_11902#0 GTGTTAATAGATTCTATTCCAATATTCCCTAACTATGGGACAATATACAATATGGCTGCT 2460 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 GCAAGAGAAGCTGAGTTATTAAAAAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGT 174 consensus_11902#0 TCAAGAACTTATTGGCTTAGTGTTTGCCTTATAATAGTCCTAGGCTTGCTTCCTCGGTTT 2520 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 GATATCAGCTGACAACAATGGTTCGGCGCAGTTGCTCTGTGATCCCAGTTTGCGGGTTAT 234 consensus_11902#0 CTTTGCAAAGTAATCTATCAGACCTTTTGGCCATCTGATATTCAAATAGCAAGAGAAGCT 2580 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 GTTGATTCAATTGTTGAGCTGATTTTTGCCCATTTTTTTGGTAAGTTCTGTTCATCAATT 294 consensus_11902#0 GAGTTATTAAAAAAGCTACCCCGGCAGTTGGGTTCAAGGCCTGCAAGTGATATCAGCTGA 2640 consensus_11902#2 ------------------------------------------------------------ consensus_11902#1 TACACGGTGCATCATTTGATTTAGGGCAAGTGTTACCTAGTCATGTATTATTTGTCTCGA 354 consensus_11902#0 CAACAATGGTTCGGCGCAGTTGCTCTGTGATCCCAGTTTGCGGGTTATGTTGATTCAA-- 2698 consensus_11902#2 ---------CCAGTTTCGGGTTTATGTTGATTCCATTGTTGAGCTGATTTTTGCCCATGT 51 consensus_11902#1 GAAGTGCAGTAGTGCTGACCTGTCAGTTGTGCCTGTTTCTCCTTTATCTATGGTCCAATG 414 * ** * * * * ** consensus_11902#0 -TTGTTGAGCTGATTTTTGCCCATTTT--TT-TGAAGAGG-CTGAAAGATGAGATGAGGC 2753 consensus_11902#2 TTTGTTGAAGTAAGATATACGAATTCTGGTT-CAGAAGAG-CTGAAAGATGAGATGAGGC 109 consensus_11902#1 AGCACAGAAGTAAGATATACGAATTCTGGTTGCAGAAGAGGCTGAAAGATGAGATGAGGC 474 ** * * * * * *** * ** * * ******************* consensus_11902#0 GGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGG 2813 consensus_11902#2 G-CTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGG 168 consensus_11902#1 GGCTGTGGAAAAAGGTACTGACTGTGAATGGGTAGGCACCAGACAGCGTCGTCCTTCGGG 534 * ********************************************************** consensus_11902#0 GGCCAAGTAATCA-AGAAATGACAAATGTACAGATATGGGAAAGGGATACATACAC-TCT 2871 consensus_11902#2 GGCCCAGTAATCACAGAAATGACCAATGTACAGATATGGGAAAGGGATACATACACCTCT 228 consensus_11902#1 GGCCAAGTAATCA-AGAAATGGACAATGTACAGATATGGGAAAGGGATACATACAC-TCT 592 **** ******** ******* ******************************** *** consensus_11902#0 GTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACA-TAGATACAAAATTCTT 2930 consensus_11902#2 GTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACACTAGATACCAAATTCTT 288 consensus_11902#1 GTATTTTAAGGTAGATTTTGTGGTTAGGAAATAAATAGGTACA-TAGATACAAAATTCTT 651 ******************************************* ******* ******** consensus_11902#0 TTTGCCAATCTTTTGTATTACTTGATTATATGTTAACCATTTTTCTTTTTCTTCCCTCCT 2990 consensus_11902#2 TTTGCCCATCTTTTGTATTACTTGATTATATGTTAACCCTTTTTCTTTTTCTTCCCTCCT 348 consensus_11902#1 TTTGCCAATCTTTTGTATTACTTGATTATATGTTAACCATTTTTCTTTTTCTTCAAAAAA 711 ****** ******************************* *************** consensus_11902#0 CG-TCAAGGTTTTAGATGGAGACTTAGTGGTGTGTCCAAATGGAATTTTACGCTTTACAC 3049 consensus_11902#2 CGCTCCAGGTTTTAGATGGAGACTTAGTGGTGTGTCCCAATGGAATTTTACGCTTTACAC 408 consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 GGTCACAAGATTGATCTCCTTTCGTGACCTATATTCATACTCTTGCTAAATTTGACACCA 3109 consensus_11902#2 GGTCACAAGATTGATCTCCTTTCGTGACCTATATTCATACTCTTGCTAAATTTGACACCC 468 consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 A---------AAAAAGNGGCCGG-AATTCGTATCAGCTACGATACGTGGCCC-------- 3151 consensus_11902#2 GTGACCATTTGAACTTTGACCGGCGAGCTGTTTCNATTGTAAATTTCTTCTTTAAAAAAA 528 consensus_11902#1 ------------------------------------------------------------ consensus_11902#0 ----- consensus_11902#2 AAAAA 533 consensus_11902#1 ----- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||