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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1192 cluster # 1192       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1192#0 length = 855 sequences # 2  

consensusID : consensus_1192#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 855
fasta sequence
                              [GCCTTCGGATTCAGTCGAGAGGATAGCGGAACAAGCGGGAGGAGTCTCCGTCGAGGCCACCGAATTTACCCCATGCCACCTCCTCCAACACACCGGAGAGGAGAGGGAGGAGGCGGCGCAAG-CAACCGCCACCATCACGAGCTCAGGTTGCTGTAGCCAGCCATCACGCGCACTGTTGCCTTATGTGCACCGTTGAGGAGAAGGGTAGGTACACGTCATGCAGGGGACTTCTACACCACCACTGCCCATTCACTAGATCTGGTGCTCAACATTTTTTTTCTGATATGTTTGGTTTTTTCTTGTTCATGTTGTTCTTTCCCTTTTGACGNATGCAAATAATCTGTGTAATTGATTTTAATTGGAGGAATNATGGAATTTGTTCGNTTGTGTCAAAANTTGTGATTTGGGTTATATNATTTGTGCTATTGAAGAACAATTTGGGATTCATGAAGAATAATTTAGGATTATTTTGTCATTTTCTTTACTGCAAGCATAGGCTCAAGACGAGCTGACTTTTTTTTTGGAATCGTGCAACTAATCGGTACCGGTTCTCAATTCGGCACCGATGAGCCTTCTGATCAGTGCCGCCTCTGTGATGCCGGTTGGAAAATACAGCATATATGTAGGTTTCCATGCGGCACCCATTAGATTTTGTGTAGTAGTGACATTTGAATGGGCTTTATCGCCCTAAATTGATGCCCTTTTTGACCCAATTTGGTTGGAAAATAGTGTGGCCTTGGAAGGTCACAATTATGTCGTTGCATTAAGCACTGACGCTCTTGTCCCGGTTATGATTTGCACCTTTTTCTTTTTAATAAAAAGGATTAAAATCCGATCTTTACATCCAAAAAAAAA]

[+] EMBL C28242               [GCCTTCGGATTCAGTCGAGAGGATAGCGGAACAAGCGGGAGGAGTCTCCGTCGAGGCCACCGAATTTACCCCATGCCACCTCCTCCAACACACCGGAGAGGAGAGGGAGGAGGCGGCGCAAG CAACCGCCACCATCACGAGCTCAGGTTGCTGTAGCCAGCCATCACGCGCACTGTTGCCTTATGTGCACCGTTGAGGAGAAGGGTAGGTACACGTCATGCAGGGGACTTCTACACCACCACTGCCCATTCACTAGATCTGGTGCTCAACATTTTTTTTCTGATATGTTTGGTTTTTTCTTGTTCATGTTGTTCTTTCCCTTTTGACGNATGCAAATAATCTGTGTAATTGATTTTAATTGGAGGAATNATGGAATTTGTTCGNTTGTGTCAAAANTTGTGATTTGGGTTATATNATTTGTGCTATT                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C97583               [                                                                  acCCCCATGCCACTTCTTCCAACACACCGGAGAGNAGAGGGAGGAGCCGGCGCANGCCAACGGCCACCATCACGAGCTCAGGTTGCTGTAGCCAGCCATCACGCGCACTGTTGCCTTATGTGCACCGTTGAGGAGAAGGGTAGGTACACGTCATGCAGGGGACTTCTACACCACCACTGCCCATTCACTAGATCTGGTGCTCAACATTTTTTTTCTGATATGTTTGGTTTTTTCTTGTTCATGTTGTTCTTTCCCTTTTGACGCATGCAAATGATCTGTGTAATTGATTTTAATTGGAGGAATGATGGAATTTGTTCGTTTGTGTCAAAATTTGTGATTTGGTTTATATGATTTGTGCTATTGAAGAACAATTTGGGATTCATGAAGAATAATTTAGGATTATTTTGTCATTTTCTTTACTGCAAGCATAGGCTCAAGACGAGCTGACTTTTTTTTTGGAATCGTGCAACTAATCGGTACCGGTTCTCAATTCGGCACCGATGAGCCTTCTGATCAGTGCCGCCTCTGTGATGCCGGTTGGAAAATACAGCATATATGTAGGTTTCCATGCGGCACCCATTAGATTTTGTGTAGTAGTGACATTTGAATGGGCTTTATCGCCCTAAATTGATGCCCTTTTTGACCCAATTTGGTTGGAAAATAGTGTGGCCTTGGAAGGTCACAATTATGTCGTTGCATTAAGCACTGACGCTCTTGTCCCGGTTATGATTTGCACCTTTTTCTTTTTAATAAAAAGGATTAAAATCCGATCTTTACATCCAAAAAAAAA]


>consensus_1192#0 GCCTTCGGATTCAGTCGAGAGGATAGCGGAACAAGCGGGAGGAGTCTCCGTCGAGGCCAC CGAATTTACCCCATGCCACCTCCTCCAACACACCGGAGAGGAGAGGGAGGAGGCGGCGCA AGCAACCGCCACCATCACGAGCTCAGGTTGCTGTAGCCAGCCATCACGCGCACTGTTGCC TTATGTGCACCGTTGAGGAGAAGGGTAGGTACACGTCATGCAGGGGACTTCTACACCACC ACTGCCCATTCACTAGATCTGGTGCTCAACATTTTTTTTCTGATATGTTTGGTTTTTTCT TGTTCATGTTGTTCTTTCCCTTTTGACGNATGCAAATAATCTGTGTAATTGATTTTAATT GGAGGAATNATGGAATTTGTTCGNTTGTGTCAAAANTTGTGATTTGGGTTATATNATTTG TGCTATTGAAGAACAATTTGGGATTCATGAAGAATAATTTAGGATTATTTTGTCATTTTC TTTACTGCAAGCATAGGCTCAAGACGAGCTGACTTTTTTTTTGGAATCGTGCAACTAATC GGTACCGGTTCTCAATTCGGCACCGATGAGCCTTCTGATCAGTGCCGCCTCTGTGATGCC GGTTGGAAAATACAGCATATATGTAGGTTTCCATGCGGCACCCATTAGATTTTGTGTAGT AGTGACATTTGAATGGGCTTTATCGCCCTAAATTGATGCCCTTTTTGACCCAATTTGGTT GGAAAATAGTGTGGCCTTGGAAGGTCACAATTATGTCGTTGCATTAAGCACTGACGCTCT TGTCCCGGTTATGATTTGCACCTTTTTCTTTTTAATAAAAAGGATTAAAATCCGATCTTT ACATCCAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)