These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11954#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1993 fasta sequence [CTCAGTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG-CAGCCGGA-GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC-TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCGAGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTCCACATGTCAA-GCAAGTGAAGCTATCAAATGC-TGGAGGGAGGCTAATAATTGCATCAGATGGAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAGAGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACACCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAGATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTGGGAGTCTATCAACAGCGCAGATGAAAATTTCTGTTTGCACTGGGAAGATAGCTCACAGGATTTCAACCCCGTAG-----TTTTTTTTTTTTTTGAACCTTAGTATGTAAAGTGAAATGTCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGAATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCTATCCTAATCAATGGTAATGTCTTTCGGTGTTC] [+] EMBL C27805 [CTCAGTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTG GCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGG AGNCAG CGGANGCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTNGGTAGGAGGACTAGGAGTGCGGCNGCTCGGGGAGAGGCTTCCAATGGAAAGCNCCACCGGGGAAGAAGG ] [+] EMBL AU160985 [ TCAGTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG CAGCCGGA GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCG ] [+] EMBL AK101878 [ GTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG CAGCCGGA GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCGAGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTCCACATGTCAA GCAAGTGAAGCTATCAAATGC TGGAGGGAGGCTAATAATTGCATCAGATGGAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAGAGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACACCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAGATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTGGGAGTCTATCAACAGCGCAGATGAAAATTTCTGTTTGCACTGGGAAGATAGCTCACAGGATTTCAACCCCGTAG TTTTTTTTTTTTTTGAACCTTAGTATGTAAAGTGAAATGTCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGAATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCTATCCTAATCAATGGTAATGTCT ] [+] EMBL AK102523 [ CACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG CAGCCGGA GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCGAGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTCCACATGTCAA GCAAGTGAAGCTATCAAATGC TGGAGGGAGGCTAATAATTGCATCAGATGGAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAGAGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACACCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAGATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTGGGAGTCTATCAACAGCGCAGATGAAAATTTCTGTTTGCACTGGGAAGATAGCTCACAGGATTTCAACCCCGTAGTTTTTTTTTTTTTTTTTTTGAACCTTAGTATGTAAAGTGAAATGTCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGAATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCTATCCTAATCAATGGTAATGTCTT ] [+] EMBL AK106531 [ ACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG CAGCCGGA GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCGAGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTCCACATGTCAA GCAAGTGAAGCTATCAAATGC TGGAGGGAGGCTAATAATTGCATCAGATGGAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAGAGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACACCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAGATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTGGGAGTCTATCAACAGCGCAGATGAAAATTTCTGTTTGCACTGGGAAGATAGCTCACAGGATTTCAACCCCGTAG TTTTTTTTTTTTTTGAACCTTAGTATGTAAAGTGAAATGTCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGAATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCTATCCTAATCAATGGTAATGTCTTTCGGTGTTC] [-] EMBL AU093318 [ CGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAAGTCATTGTGCCAATTCCACATGTCAAGGCAAGTGAAGCTATCAAATGCTTGGAGGGAGGCTAATAATTGCATCAGATGGAAATTGGG ] [+] EMBL OSC28311 [ naactanCCTGTNTGGTTATTGATATCATCCCATCTGATCATTCTTCAACACCTNCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTNCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGATGGATGAAAGGTTGGGTAGGAATTTCCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCT ] [-] EMBL C28488 [ TTTAGTG CAG TAA NGA GTGGTT CTG TCTGCCCCATCGACACCAT GGTTGGCCCTTA CCTTG TCAGATTGT GGAAAAAGAAGGATGCAATGGAAGGTAAAAGANCTAGNCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGG CCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATNATAATCTGTTTGCTGCTGGAACCAAGTATTATTGGTG ] consensusID : consensus_11954#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 600 fasta sequence [GTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAATTAACTGCATTCTATCCTGAACTGAACATATTGGTCTACTAACATTTTTGTTAGTTTATTAATCATCTCACTTTTATCATTTTTCTTTGTTTCTCTCTTTTTTTTTTTTATTTTATCTTTTATTTCATCCTCTCTCTCTTCCTCTGCCTCCCCTCTTTTTCCTTCTAATTTCTAACTGTGCTCCTTCTTTCTTCATTTTTATTTTATTTATTTTTTCCCCTTTTATAACATTTTCCTTCTTCACGAAACTCCCCTCCCCCATCTTTTCTCCTCTCTCTTTATCCTCTTCCTCTCTCTTTCTTTTTTCGTTTTTCTTCTTTTTTCTTTCGTCTCTCCTTTCTTTCTCCTTAGATTCTTAACTCTCTTTC] [+] EMBL BE039649 [GTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAATTAACTGCATTCTATCCTGAACTGAACATATTGGTCTACTAACATTTTTGTTAGTTTATTAATCATCTCACTTTTATCATTTTTCTTTGTTTCTCTCTTTTTTTTTTTTATTTTATCTTTTATTTCATCCTCTCTCTCTTCCTCTGCCTCCCCTCTTTTTCCTTCTAATTTCTAACTGTGCTCCTTCTTTCTTCATTTTTATTTTATTTATTTTTTCCCCTTTTATAACATTTTCCTTCTTCACGAAACTCCCCTCCCCCATCTTTTCTCCTCTCTCTTTATCCTCTTCCTCTCTCTTTCTTTTTTCGTTTTTCTTCTTTTTTCTTTCGTCTCTCCTTTCTTTCTCCTTAGATTCTTAACTCTCTTTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11954#0 CTCAGTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTG 60 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 TTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCA 120 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 GATCCATCTCGGGTTCCTCCCGCCGTTGGCAGCAGCCGGAGCTTTTTTCCGCGGAAGAAA 180 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 TGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTA 240 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 GGAGTGCGGCGGCTCGGGGAGAGGCTGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGG 300 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 CTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCG 360 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 AGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCC 420 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 TCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCG 480 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 CCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGG 540 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 AGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGC 600 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 CGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGG 660 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 CATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTG 720 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 TTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGG 780 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 ACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGG 840 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 TCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTG 900 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 GATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTC 960 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 CACATGTCAAGCAAGTGAAGCTATCAAATGCTGGAGGGAGGCTAATAATTGCATCAGATG 1020 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 GAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAG 1080 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 AGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACA 1140 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 CCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTAT 1200 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 CTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTT 1260 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 CTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAG 1320 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 AGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGT 1380 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 CCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAG 1440 consensus_11954#1 ------------------------------------------------------------ consensus_11954#0 ATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTT 1500 consensus_11954#1 ------------------GTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTT 42 ****************************************** consensus_11954#0 CAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGT 1560 consensus_11954#1 CAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGT 102 ************************************************************ consensus_11954#0 GCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTT 1620 consensus_11954#1 GCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTT 162 ************************************************************ consensus_11954#0 CGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATT 1680 consensus_11954#1 CGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATT 222 ************************************************************ consensus_11954#0 ATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTG 1740 consensus_11954#1 ATTGGTGAAATTAACTGCATTCTATCCTGAACTGAACATATTGGTCTACTAACATTTTTG 282 ********** ******** **** ************* ***** ********* * *** consensus_11954#0 GGAGTCTATCAA-CAGCGCAGATGAAA-ATTTCTGTTTG---CACTGGGAAGATAGCTCA 1795 consensus_11954#1 TTAGTTTATTAATCATCTCACTTTTATCATTTTTCTTTGTTTCTCTCTTTTTTTTTTTTA 342 *** *** ** ** * ** * * **** * **** * ** * * * consensus_11954#0 CAGGAT-TTCAACCCCGTAGTTTTTTTTTTTTT-TGAACCTTAGTATGTAAAGTGAAATG 1853 consensus_11954#1 TTTTATCTTTTATTTCATCCTCTCTCTCTTCCTCTGCCTCCCCTCTTTTTCCTTCTAATT 402 ** ** * * * * * * * ** * ** * * * * *** consensus_11954#0 TCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGA 1913 consensus_11954#1 TCTAACTGTGCTCCTTCTTTCTTCATTTTTATTTTATTTATTTTTTCCCCTTTTATAACA 462 **** ** * * * * * * ** * * * * * consensus_11954#0 ATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCT--ATCCTAATCA 1971 consensus_11954#1 TTTTCCTTCTTCACGAAACTCCCCTCCCCCATCTTTTCTCCTCTCTCTTTATCCTCTTCC 522 * * * * * * * * * ** * ** *** ** ***** ** consensus_11954#0 ATGGTAATG--TCTTTCGGTGTTC------------------------------------ 1993 consensus_11954#1 TCTCTCTTTCTTTTTTCGTTTTTCTTCTTTTTTCTTTCGTCTCTCCTTTCTTTCTCCTTA 582 * * * ***** * *** consensus_11954#0 ------------------ consensus_11954#1 GATTCTTAACTCTCTTTC 600 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||