These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11975#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1337 fasta sequence [TCTTTACCTAGTTCGGCTTGGGCCTCGCACCGACTCCGACTCCGACCCCGACTCCGACTCGCCGCCGCCCTTGCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGTCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAA--ATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGA-GGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCAACATTTGGCGTCCCAAAAAAAAAAAAAAAAAAGGA] [+] EMBL AK065701 [TCTTTACCTAGTTCGGCTTGGGCCTCGCACCGACTCCGACTCCGACCCCGACTCCGACTCGCCGCCGCCCTTGCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGTCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAA ATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGA GGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATT ] [+] EMBL CB656042 [ GCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTAC ] [+] EMBL AK067898 [ TATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGA GGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCA ] [-] EMBL CB654713 [ AATTCAGTGATGTCTTTGTGGATGAGCCACCATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGCCCTAGAGA GGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTTTTTGGCACAAGGAACAAAATATGGTTAGCCACCCATGATATATCAGAGGTATAATGCTTACCCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTTTAGAAGTAATGTTAATGCATTTTTTCAAGTGTTGTACTGCGAATAATTCGATGGGTTTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAATTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATTTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCATTAGTCCACAGCTCATTAATCATACTCAACATTTGGCGTCCCAAAAAAAAAAAAAAAAAAGGA] [+] EMBL CB679712 [ AGAGACGTATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATT ] consensusID : consensus_11975#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1284 fasta sequence [CGCCGCCCTTGCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGGTGGTTTGCAAGTTGGAGGTGGAATAAATTTGGAGAATGCGATATCTTACCTTAATGAAGGTGCCAGTCACGTGATTGTTACTTCTTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGGTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAAAAAAAAAAAAAAAAAAGA] [+] EMBL CB654712 [CGCCGCCCTTGCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGGTGGTTTGCAAGTTGGAGGTGGAATAAATTTGGAGAATGCGATATCTTACCTTAATGAAGGTGCCAGTCACGTGATTGTTACTTCTTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGGTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACC ] [-] EMBL CB656043 [ AACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAAAAAAAAAAAAAAAAAAGA] consensusID : consensus_11975#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 805 fasta sequence [TTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCAACATTTGGCGTACCAAGCTGCAGTGGTTACAGTGCGTTTTCTTTGGAAGTGGGCCGAGGGATTTATGCCCCACTTAAAATGTGGGCATTTCCCCACTTTCCTGCAGGTCATGTGAAATCACTACTGCAGTACTCCTATGTGCCAAGCATGCCAATGTGGCCATGTGGCCTGTGGGTCTATTGGCGACGTTTGGCTGTGGAGTACTGCTCAGTAATGGATTGAGTAAAACATCTCAAGGCACCATTTGCAACTTCTCAGCAGTTCATAATGCAAGAGCTGATTTGTTTGGAACTATGGATGCAAATTGTTGGTCTTGT] [-] EMBL CB631942 [TTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCAACATTTGGCGTACCAAGCTGCAGTGGTTACAGTGCGTTTTCTTTGGAAGTGGGCCGAGGGATTTATGCCCCACTTAAAATGTGGGCATTTCCCCACTTTCCTGCAGGTCATGTGAAATCACTACTGCAGTACTCCTATGTGCCAAGCATGCCAATGTGGCCATGTGGCCTGTGGGTCTATTGGCGACGTTTGGCTGTGGAGTACTGCTCAGTAATGGATTGAGTAAAACATCTCAAGGCACCATTTGCAACTTCTCAGCAGTTCATAATGCAAGAGCTGATTTGTTTGGAACTATGGATGCAAATTGTTGGTCTTGT] consensusID : consensus_11975#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 716 fasta sequence [GCCCTTGACTCTCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGCATTGGATGGCGTCGAGATGCGCGGCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCTGGCTGGGCTGGCCCGGTGGTCTCCATCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTAGCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATACGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGTTCACGCTCTTCTAGTGTGATGCCTATGCTGCATGTCGGCATACGGACAATTCCAAACGCATGGCGTGCATGGCATTTCATAGGCAAAAAGTGTTAGAACAGTGGCATGGTTGATTACATCTTTTTGGAATTTCGCTTAGAACAGTTCATGAGGGTCCCTTTCTTGAATTTTTCAATTTGATCTGT] [+] EMBL CB631941 [GCCCTTGACTCTCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGCATTGGATGGCGTCGAGATGCGCGGCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCTGGCTGGGCTGGCCCGGTGGTCTCCATCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTAGCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATACGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGTTCACGCTCTTCTAGTGTGATGCCTATGCTGCATGTCGGCATACGGACAATTCCAAACGCATGGCGTGCATGGCATTTCATAGGCAAAAAGTGTTAGAACAGTGGCATGGTTGATTACATCTTTTTGGAATTTCGCTTAGAACAGTTCATGAGGGTCCCTTTCTTGAATTTTTCAATTTGATCTGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11975#1 ------------------------------------------------------------ consensus_11975#3 ------------------------------------------------------------ consensus_11975#0 TCTTTACCTAGTTCGGCTTGGGCCTCGCACCGACTCCGACTCCGACCCCGACTCCGACTC 60 consensus_11975#2 ---------------------------------------------------TTAGGAATT 9 consensus_11975#1 --CGCCGCCCTTGCGCCGCCTCCGC---GGAGCCCTCCCCTCCCCGCCGGCGGCGGCTGC 55 consensus_11975#3 -----------------GCCCTTG----ACTCTCCTCCCCTCCCCGCCGGCGGCGGCTGC 39 consensus_11975#0 GCCGCCGCCCTTGCGCCGCCTCCGC---GGAGCCCTCCCCTCCCCGCCGGCGGCGTCTGC 117 consensus_11975#2 GATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGG 69 * * * ** * ** * * * consensus_11975#1 GAAGCGACTGGATTGGATGGCATCGAG------------GGTTCCGTCTCCACCGTGCGC 103 consensus_11975#3 GAAGCGACTGCATTGGATGGCGTCGAGATGCGCGGCGAGGGTTCCGTCTCCACCGTGCGC 99 consensus_11975#0 GAAGCGACTGGATTGGATGGCATCGAG------------GGTTCCGTCTCCACCGTGCGC 165 consensus_11975#2 GGTGTGTCTACAATGGATGACCTAGAGAGG------ATAAAAAGAGCAGGCAACAGTCGA 123 * * * ** * ****** * * *** * ** * ** consensus_11975#1 GGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGT 163 consensus_11975#3 GGCGGCGCGGTCTGGCTGGGCTGGCCCGGTGGTCTCCATCCGGCCGGCGAGATCCGGCGT 159 consensus_11975#0 GGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGT 225 consensus_11975#2 GTTGATGT--TACGGTTGGGAGTGCCCT-TGATAT--ATTCGG---AGGAGATTTGCCCT 175 * * * * ** **** *** ** * * * *** ***** * * * consensus_11975#1 GGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAA 223 consensus_11975#3 GGCGAGAGGACGTGCTGTGGTGTGCGCCGTTAGCTTCAGGCCGTGTATCGATATTCATAA 219 consensus_11975#0 GGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAA 285 consensus_11975#2 ACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCA 235 ** * *** ** *** * * * * * * * ** ** * consensus_11975#1 GGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCA---TCAAACGATGGCAC 280 consensus_11975#3 GGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCA---TCAAACGATGGCAC 276 consensus_11975#0 GGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCA---TCAAACGATGGCAC 342 consensus_11975#2 GAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGT 295 * * ** * ** ** * * * * * * * **** * * consensus_11975#1 GGCACTTGTTACAAATTTTGAATCAGACAA-ACCTCCAGCAGAATTTGCAAATATATATA 339 consensus_11975#3 GGCACTTGTTACAAATTTTGAATCAGACAA-ACCTCCAGCAGAATTTGCAAATATATATA 335 consensus_11975#0 GGCACTTGTTACAAATTTTGAATCAGACAA-ACCTCCAGCAGAATTTGCAAATATATA-- 399 consensus_11975#2 TCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCG-AGCTGTTTATC 354 * ** * * ** * *** ** * ** * ** * * * * * ** consensus_11975#1 AAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAG 399 consensus_11975#3 AAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAG 395 consensus_11975#0 AAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAG 459 consensus_11975#2 AAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACAT 414 *** * ** *** ** * * * * * ** ** ** ** * consensus_11975#1 CTGCTGCCATGGAAGCACTACATGCATATCCTGGTGGTTTGCAAGTTGGAGGTGGAATAA 459 consensus_11975#3 CTGCTGCCATGGAAGCACTACATGCATATCCTG--------------------------- 428 consensus_11975#0 CTGCTGCCATGGAAGCACTACATGCATATCCTG--------------------------- 492 consensus_11975#2 CTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGG----------------------- 451 ** *** * * ** * * * * consensus_11975#1 ATTTGGAGAATGCGATATCTTACCTTAATGAAGGTGCCAGTCACGTGATTGTTACTTCTT 519 consensus_11975#3 -----------------------------------------------------------T 429 consensus_11975#0 -----------------------------------------------------------T 493 consensus_11975#2 ------------------------------------------GGGCCTCCACTAGTCCAC 469 consensus_11975#1 ATGTGTTTAGTGA-AGGCAAAAT---GAACATTGAACGGCTGAAGCAACTTGTCGATCTG 575 consensus_11975#3 ATGTGTTTAGTGA-AGGCAAAAT---GAACATTGAACGGCTGAAGCAACTTGTCGATCTG 485 consensus_11975#0 ATGTGTTTAGTGA-AGGCAAAAT---GAACATTGAACGGCTGAAGCAACTTGTCGATCTG 549 consensus_11975#2 AGCTCATTAATCATACTCAACATTTGGCGTACCAAGCTGCAGTGGTTACAGTGCGTTTTC 529 * * *** * * * *** ** * * * * ** * * ** ** * * consensus_11975#1 GTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCC 635 consensus_11975#3 GTTGGGAAACATACGCTTGTTTTGGACCTTAGTTGTAGAAAAAAG--TTCACGCTCTTCT 543 consensus_11975#0 GTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCC 609 consensus_11975#2 TTTGGAAGTGGGCCGAGGGATTTATGCCCCACTTAAAATGTGGGCATTTCCCCACTTTCC 589 **** * * * *** ** * ** * * * * consensus_11975#1 ATC--GTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAA 693 consensus_11975#3 AGT--GTGATGCCTATGCTGCATGTCGGCATACGGACAATTCCAAACGCAT-GGCGT--- 597 consensus_11975#0 ATC--GTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAA 667 consensus_11975#2 TGCAGGTCATGTGAAATCACTACTGCAGTACTCCTATG-TGCCAAGCATGCCAATGTGGC 648 ** * * * * * * consensus_11975#1 AACATCTTGC-----TGCCTATGCAGAT--GAATTTTTGGTTCATGGT--GTTGATGTG- 743 consensus_11975#3 -GCATGGCAT-----TTCATAGGCAAA---AAGTGTTAGAACAGTGGC--ATGGTTG--- 643 consensus_11975#0 AACATCTTGC-----TGCCTATGCAGAT--GAATTTTTGGTTCATGGT--GTTGATGTG- 717 consensus_11975#2 CATGTGGCCTGTGGGTCTATTGGCGACGTTTGGCTGTGGAGTACTGCTCAGTAATGGATT 708 * * * ** * * ** * * consensus_11975#1 GAGGGGAAAAGGGTAGGAATTGATGAAGAACTTGTCG--AACTATTGG-----GACGTTA 796 consensus_11975#3 -ATTACATCTTTTTGGAATTTCGCTTAGAAC--------AGTTCATGA-----GGGTCCC 689 consensus_11975#0 GAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCG--AACTATTGG-----GACGTTA 770 consensus_11975#2 GAGTAAAACATCTCAAGGCACCATTTGCAACTTCTCAGCAGTTCATAATGCAAGAGCTGA 768 * * *** * * * * consensus_11975#1 TTC-ACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGA 855 consensus_11975#3 TTT-CTTGAATTTTTCAATTTGATCTGT-------------------------------- 716 consensus_11975#0 TTC-ACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGA 829 consensus_11975#2 TTTGTTTGGAACTATGGATGCAAATTGTTGGTCTTGT----------------------- 805 ** * ** consensus_11975#1 TAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCG 915 consensus_11975#3 ------------------------------------------------------------ consensus_11975#0 TAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCG 889 consensus_11975#2 ------------------------------------------------------------ consensus_11975#1 GAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCC 975 consensus_11975#3 ------------------------------------------------------------ consensus_11975#0 GAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCC 949 consensus_11975#2 ------------------------------------------------------------ consensus_11975#1 AACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCAC 1035 consensus_11975#3 ------------------------------------------------------------ consensus_11975#0 AACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCAC 1009 consensus_11975#2 ------------------------------------------------------------ consensus_11975#1 AGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAA 1095 consensus_11975#3 ------------------------------------------------------------ consensus_11975#0 AGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAA 1069 consensus_11975#2 ------------------------------------------------------------ consensus_11975#1 TTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGG 1155 consensus_11975#3 ------------------------------------------------------------ consensus_11975#0 TTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGG 1129 consensus_11975#2 ------------------------------------------------------------ consensus_11975#1 AACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTT 1215 consensus_11975#3 ------------------------------------------------------------ consensus_11975#0 AACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTT 1189 consensus_11975#2 ------------------------------------------------------------ consensus_11975#1 TTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAAAAAAAAAAA 1275 consensus_11975#3 ------------------------------------------------------------ consensus_11975#0 TTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGA 1249 consensus_11975#2 ------------------------------------------------------------ consensus_11975#1 AAAAAAAGA--------------------------------------------------- 1284 consensus_11975#3 ------------------------------------------------------------ consensus_11975#0 TGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCAACATTTG 1309 consensus_11975#2 ------------------------------------------------------------ consensus_11975#1 ---------------------------- consensus_11975#3 ---------------------------- consensus_11975#0 GCGTCCCAAAAAAAAAAAAAAAAAAGGA 1337 consensus_11975#2 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||