cluster # 11985

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Oryza sativa
cluster # 11985 cluster # 11985 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11985#0 length = 2615 sequences # 8

consensus_11985#1 length = 443 sequences # 1

consensusID : consensus_11985#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2615
fasta sequence

                              [CACTCTCATCTTCATCCTCAGCTCAGCTCAGCTCAGCTCAAGCTCAAAAGCCTTTTTTGTTTGTTCGCTGCTGCCACTGTCCCCATCCTCCTCTCCTCGCTGCCGTTTGCTTCACTCCCACTGCTCCTCCTCCACGCGCGCGCGCGCGGGGGCTAGATCTCGCCGGAACCCTAGCCGGTAATGCCACGGGCGGCTGCCGCGGCGGGACAGTGAGGTGTTGAGGGGGTTTCCGGATCGATGCATCGGGTGGCCATGGCTGCGGCGGCGGCGGGGGACGGCGGCGACGGGAGGGGGCGGACGCTGGGGGCGGTCATCAAGGAGAAGGACGAGGAGCTGGCCCTCTTCCTCGAGATGCGCCGCCGCGAGAAGGAGCGCGGCGCTGCTGCCGCTGCCGCGGCGGCCGAGCAGCTGCTGCTTTCCGGGGACCGCGTCGACGTGGCGCGGGATGGGATGCTTCTCGTCGACCAACCGCCGCCGCGCCCGCAGCCTCCCGCCGAGCACAAGGCGGCGGCGTACAGGATGACCGGCGGGTTCAGGAGAGCGCCCGGCGGCGCCGACGACTTCCTCAATTCGGACGGCGGCGACAAGAACGATTACGACTGGCTTCTGACTCCACCAGGAACTCCACTTTTTCCATCTCTAGAAGAGTCAAAAAAGTCCCCAGTGAGCCAAACTGGAACCCCAAAGACTCGCCCAACTGCCTTAAAATCAAGGTTGGCCAATCATCCAGATCCTCCATCAAGAACAACCCTTCCATTGAGAGCAACATCATCAAACAACTTGAACTCAGCTGCCACAACACGTAGGCCGTCATCTTCTGGAGGGCACACATCTAATTCATCAAGGCCTTCAACACCAACTGGGCGGCCTGCACTGACCAATACCTCCAAAGGTTCAAGAC---CTTCAACCCCCACATCTCGGGCAACTGTACCTTCTAAGTCTGGACCTCCTGCCCCAAGATCATCAACTCCCACTTCCAGGTCAACACTTACTTCAGCAAGGTCAACAACACCTTCAAGAACATCTGGCCCTGCTACCAGGACATCAATTCCTTCAGGTAGAGCATCAGCACCAGCTAGCAGGTCATCCACACCTACTTCAAGATCATCGATACCTGCTACCAGGTCATCCACGCCATCATCCAGGCCCTCCATACCAGCACAAAGCAAGCCAGTATCAAGGTCATCAACCCCAACAAGACGGCCTTCTGCCACTTCCACCCAACATGGTAGCTTGGCTGCACCAGTTCGATCTACCTCAATCTCCAAACCAGCCCCTACAATGTCCAAAAGTTCTTCACCGGCAAAAACTATAGCGTCAACACCTTCAAGGGGCAGCTCACCTACTGTCAAATCGAGACCATGGAAGCCATCTGAAATGCCTGGCTTCTCACTTGACGCTCCTCCAAATCTGAGGACATCACTACCAGAAAGACCAACCTCTGCTACTCGTGGCAGACCTGGAGCTCCTAGTTCTAGGTCTTCCTCTGTGGAGCCTGGGCCAGCTGCTCGGCCAAGACGGCAGTCTTGCTCTCCTTCTAGAGGGAGGACTTTAAATGGTAGTGTGCCTTCAGGTAGTTCGGTGCCAGCAGTGAGAAGATCACATCTTAATAGTGGTGACAGTGTCAATCCTGTTCAAATGGGTAATAAGATGGTTGAGAGGGTAGTGAACATGAGAAGGCTAGTTCCTCCAAAACATGATGACCAAAGATCCAGCCTCAACGGTCTATCTGGAAAATCATCAAACTCTCCAGATAGCTCTGGCTTCGGTAGGACATTGTCAAAAAAGTCACTTGACATGGCTCTTCGACATATGGACATACGGCGCAGCATTCCAAACAATTTACGGCCTCTTATGACAAGCATACCAGCATCCTCTGTGCATAGCGCACGGTCAGGGTCTACAAGGAGCAGACCAATTAGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTCAACAACAACCTGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGGGCAGGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGGTTTACGACCTTAAAATGTTCAGAGCAGCGAT-GGGAGGATCATCTCCAAGATGACCT-GATGGGTTCCTATTCTCATATGTAGTTCA-TTGGGTGTCCAATATTTATCCGGTTTATTCATGTTATGTTGCGAGCTGCTCCATGTGCAACTTTATTCTGGACCTTATATGCTATTGAAAAGCGTCTTTTATG-TGTTCAGTCC-TTGAGTATCATTTTCAGTACTTTGGGA-GTTTAAGTTAGGTCTTCTTAGCCCCTTGAGTCTTTGACACCATCTTGTAGCGGATTTCGCGCTACAGCCTGGTAGTCACATGTGTTTCCCCGGCTGAACTGTATTGACATTTTTCTCT-GTTGTTGTATCAGCAATGTAAATTTAGTAGCATTTTTTCTTTCAAGTAATATTTTCTCAGGAGACAGTCACTGCTGCCGTAAAACTGTTGCTGTAATCTTGTAAATTCCAAATTGGTAAGTCAATTAGTAGCAAATTCTCTGAAGGGTAAGGGTCAAAACAAAAAAAAAAAA]

[+] EMBL AU174196             [CACTCTCATCTTCATCCTCAGCTCAGCTCAGCTCAGCTCAAGCTCAAAAGCCTTTTTTGTTTGTTCGCTGCTGCCACTGTCCCCATCCTCCTCTCCTCGCTGCCGTTTGCTTCACTCCCACTGCTCCTCCTCCACGCGCGCGCGCGCGGGGGCTAGATCTCGCCGGAACCCTAGCCGGTAATGCCACGGGCGGCTGCCGCGGCGGGACAGTGAGGTGTTGAGGGGGTTTCCGGATCGATGCATCGGGTGGCCATGGCTGCGGCGGCGGCGGGGGACGGCGGCGACGGGAGGGGGCGGACGCTGGGGGCGGTCATCAAGGAGAAGGACGAGGAGCTGGCCCTCTTCCTCGAGATGCGCCGCCGCGAGAAGGAGCGCGGCGCTGCTGCCGCTGCCGCGGCGGCCGAGCAGCTGCTGCTTTCCGGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK070848             [               CCTCAGCTCAGCTCAGCTCAGCTCAAGCTCAAAAGCCTTTTTTGTTTGTTCGCTGCTGCCACTGTCCCCATCCTCCTCTCCTCGCTGCCGTTTGCTTCACTCCCACTGCTCCTCCTCCACGCGCGCGCGCGCGGGGGCTAGATCTCGCCGGAACCCTAGCCGGTAATGCCACGGGCGGCTGCCGCGGCGGGACAGTGAGGTGTTGAGGGGGTTTCCGGATCGATGCATCGGGTGGCCATGGCTGCGGCGGCGGCGGGGGACGGCGGAGACGGGAGGGGGCGGACGCTGGGGGCGGTCATCAAGGAGAAGGACGAGGAGCTGGCCCTCTTCCTCGAGATGCGCCGCCGCGAGAAGGAGCGCGGCGCTGCTGCCGCTGCCGCGGCGGCCGAGCAGCTGCTGCTTTCCGGGGACCGCGTCGACGTGGCGCGGGATGGGATGCTTCTCGTCGACCAACCGCCGCCGCGCCCGCAGCCTCCCGCCGAGCACAAGGCGGCGGCGTACAGGATGACCGGCGGGTTCAGGAGAGCGCCCGGCGGCGCCGACGACTTCCTCAATTCGGACGGCGGCGACAAGAACGATTACGACTGGCTTCTGACTCCACCAGGAACTCCACTTTTTCCATCTCTAGAAGAGTCAAAAAAGTCCCCAGTGAGCCAAACTGGAACCCCAAAGACTCGCCCAACTGCCTTAAAATCAAGGTTGGCCAATCATCCAGATCCTCCATCAAGAACAACCCTTCCATTGAGAGCAACATCATCAAACAACTTGAACTCAGCTGCCACAACACGTAGGCCGTCATCTTCTGGAGGGCACACATCTAATTCATCAAGGCCTTCAACACCAACTGGGCGGCCTGCACTGACCAATACCTCCAAAGGTTCAAGAC   CTTCAACCCCCACATCTCGGGCAACTGTACCTTCTAAGTCTGGACCTCCTGCCCCAAGATCATCAACTCCCACTTCCAGGTCAACACTTACTTCAGCAAGGTCAACAACACCTTCAAGAACATCTGGCCCTGCTACCAGGACATCAATTCCTTCAGGTAGAGCATCAGCACCAGCTAGCAGGTCATCCACACCTACTTCAAGATCATCGATACCTGCTACCAGGTCATCCACGCCATCATCCAGGCCCTCCATACCAGCACAAAGCAAGCCAGTATCAAGGTCATCAACCCCAACAAGACGGCCTTCTGCCACTTCCACCCAACATGGTAGCTTGGCTGCACCAGTTCGATCTACCTCAATCTCCAAACCAGCCCCTACAATGTCCAAAAGTTCTTCACCGGCAAAAACTATAGCGTCAACACCTTCAAGGGGCAGCTCACCTACTGTCAAATCGAGACCATGGAAGCCATCTGAAATGCCTGGCTTCTCACTTGACGCTCCTCCAAATCTGAGGACATCACTACCAGAAAGACCAACCTCTGCTACTCGTGGCAGACCTGGAGCTCCTAGTTCTAGGTCTTCCTCTGTGGAGCCTGGGCCAGCTGCTCGGCCAAGACGGCAGTCTTGCTCTCCTTCTAGAGGGAGGACTTTAAATGGTAGTGTGCCTTCAGGTAGTTCGGTGCCAGCAGTGAGAAGATCACATCTTAATAGTGGTGACAGTGTCAATCCTGTTCAAATGGGTAATAAGATGGTTGAGAGGGTAGTGAACATGAGAAGGCTAGTTCCTCCAAAACATGATGACCAAAGATCCAGCCTCAACGGTCTATCTGGAAAATCATCAAACTCTCCAGATAGCTCTGGCTTCGGTAGGACATTGTCAAAAAAGTCACTTGACATGGCTCTTCGACATATGGACATACGGCGCAGCATTCCAAACAATTTACGGCCTCTTATGACAAGCATACCAGCATCCTCTGTGCATAGCGCACGGTCAGGGTCTACAAGGAGCAGACCAATTAGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTCAACAACAACCTGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGGGCAGGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGGTTTACGACCTTAAAATGTTCAGAGCAGCGAT GGGAGGATCATCTCCAAGATGACCT GATGGGTTCCTATTCTCATATGTAGTTCA TTGGGTGTCCAATATTTATCCGGTTTATTCATGTTATGTTGCGAGCTGCTCCATGTGCAACTTTATTCTGGACCTTATATGCTATTGAAAAGCGTCTTTTATG TGTTCAGTCC TTGAGTATCATTTTCAGTACTTTGGGA GTTTAAGTTAGGTCTTCTTAGCCCCTTGAGTCTTTGACACCATCTTGTAGCGGATTTCGCGCTACAGCCTGGTAGTCACATGTGTTTCCCCGGCTGAACTGTATTGACATTTTTCTCT GTTGTTGTATCAGCAATGTAAATTTAGTAGCATTTTTTCTTTCAAGTAATATTTTCTCAGGAGACAGTCACTGCTGCCGTAAAACTGTTGCTGTAATCTTGTAAATTCCAAA                                                            ]
[+] EMBL CB650270             [                                                                                                     GCCGTTTGCTTCACTCCCACTGCTCCTCCTCCACGCGCGCGCGCGCGGGGGCTAGATCTCGCCGGAACCCTAGCCGGTAATGCCACGGGCGGCTGCCGCGGCGGGACAGTGAGGTGTTGAGGGGGTTTCCGGATCGATGCATCGGGTGGCCATGGCTGCGGCGGCGGCGGGGGACGGCGGCGACGGGAGGGGGCGGACGCTGGGGGCGGTCATCAAGGAGAAGGACGAGGAGCTGGCCCTCTTCCTCGAGATGCGCCGCCGCGAGAAGGAGCGCGGCGCTGCTGCCGCTGCCGCGGCGGCCGAGCAGCTGCTGCTTTCCGGGGACCGCGTCGACGTGGCGCGGGATGGGATGCTTCTCGTCGACCAACCGCCGCCGCGCCCGCAGCCTCCCGCCGAGCACAAGGCGGCGGCGTACAGGATGACCGGCGGGTTCAGGAGAGCGCCCGGCGGCGCCGACGACTTCCTCAATTCGGACGGCGGCGACAAGAACGATTACGACTGGCTTCTGACTCCACCAGGAACTCCACTTTTTCCATCTCTAGAAGAGTCAAAAAAGTCCCCAGTGAGCCAAACTGGAACCCCAAAGACTCGCCCAACTGCCTTAAAATCAAGGTTGGCCAATCATCCAGATCCTCCATCAAGAACAACCCTTCCATTGAGAGCAACATCATCAAACAACTTGAACTCAGCTGCCACAACACGTAGGCCGTCATCTTCTGGAGGGCACACATCTAATTCATCAAGGCCTTNCACACCAACTGGGCGGCCTGCACTGACCAATACCTCCAAAGG TCAACACTTACTTCAgcaagggt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA767377             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGTCTTGCTCTCCTTCTAGAGGGAGGACTTTAAATGGTAGTGTGCCTTCAGGTAGTTCGGTGCCAGCAGTGAGAAGATCACATCTTAATAGTGGTGACAGTGTCAATCCTGTTCAAATGGGTAATAAGATGGTTGAGAGGGTAGTGAACATGAGAAGGCTAGTTCCTCCAAAACATGATGACCAAAGATCCAGCCTCAATGGTCTATCTGGAAAATCATCAAATTCTCCTGATAGCTCTGGCTTCGGTAGGACATTGTCAAAAAAGTCACTCGACATGGCTCTTCGACATATGGACATACGGCGCAGCATTCCAAACAATTTACGGCCTCTTATGACAAGCATACCAGCATCCTCTGTGCATAGCGCACGGTCAGGGTCTACAAGGAGCAGACCAATTAGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTCAACAACAACCTGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGGGCAGGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGGNTTACGACCTTAAAATGTTCAGAGCAGCGATGGGGAGGATCATCCCCAAGATGACCTGGATGGGTTCCTATTCTCATATGTAGGTCATTTGGGTGTCCAATATTTATCCGGNTTATTCATGGTATGNTGCGAGCTGCTTCATGTGCAACTTTATTCTGGACCNTATGTGCTATTGNAAAGCGTCTTTTATGNGGTTCAGTCCTTTGAGTATCATTTTCGGTACTTTNGGAGGTTTAAGTTANGTCTTCTTAACC                                                                                                                                                                                                                                                                            ]
[-] EMBL CB650271             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGTGCCAGCAGTGAGAAGATCACATCTTAATAGTGGTGACAGTGTCAATCCTGTTCAAATGGGTAATAAGATGGTTGAGAGGGTAGTGAACATGAGAAGGCTAGTTCCTCCAAAACATGATGACCAAAGATCCAGCCTCAACGGTCTATCTGGAAAATCATCAAACTCTCCAGATAGCTCTGGCTTCGGTAGGACATTGTCAAAAAAGTCACTTGACATGGCTCTTCGACATATGGACATACGGCGCAGCATTCCAAACAATTTACGGCCTCTTATGACAAGCATACCAGCATCCTCTGTGCATAGCGCACGGTCAGGGTCTACAAGGAGCAGACCAATTAGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTCAACAACAACCTGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGGGCAGGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGGTTTACGACCTTAAAATGTTCAGAGCAGCGAT GGGAGGATCATCTCCAAGATGACCT GATGGGTTCCTATTCTCATATGTAGTTCA TGGGGTGTCCAATATTTATCCGGTTTATTCATGTTATGTTGCGAGCTGCTCCATGTGCAACTTTATTCTTGAAGGGATATGCTATTGAAAAGCGT                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB000171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTCAATCCTGTTCAAATGGGTAATAAGATGGTTGCGTGGGTAGTGAACATGAGAAGGCTAGTTCCTCCAAAACATGATGACCAAAGATCCAGCCTCAATGGTCTATCTGGAAAATCATCAAATTCTCCTGATAGCTCTGGCTTCGGTAGGACATTGTCAAAAAAGTCACTCGACATGGCTCTTCGACATATGGACATACGGCGCAGCATTCCAAACAATTTACGGCCTCTTATGACAAGCATACCAGCATCCTCTGTGCATAGCGCACGGTCAGGGTCTACAAGGAGCAGACCAATTAGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTCAACAACAACCTGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGGGCAGGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGGTTTACGACCTTAAAATGTTCAGAGCAGCGAT GGGAGGATCATCTCCAAGATGACCT GATGGGTTCCTATTCTCATATGTAGTTCA TTGGGTGTCCAATATTTATCCGGTTTATTCATGTTATGTTGCGAGCTGCTCCATGTGCAACTTTATTCTGGACCTTATATGCTATTGAAAAGCGTCTTTTATG TGTTCAGTCC TTGAGTATCATTTTCAGTACTTTGGGA GTTTAAGTTAGGTCTTCTTAGCCCCTTGAGTCTTTGACACCATCTTGTAGCGGATTTCGCGCTACAGCCTGGTAGTCACATGTGTTTCCCCGGCTGAACTGTATTGACATTTTTCTCT                                                                                                                                                                             ]
[+] EMBL CF328360             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGACCAATTAGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTCAACAACAACCTGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGGGCAGGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTCTGATTCCTGCGAAGGTTTACGACCTTAAAATGTTCAGAGCAGCGAT GGGAGGATCATCTCCAAGATGACCT GATGGGTTCCTATTCTCATATGTAGTTCA TTGGGTGTCCAATATTTATCCGGTTTATTCATGTTATGTTGCGAGCTGCTCCATGTGCAACTTTATTCTGGACCTTATATGCTATTGAAAAGCGTCTTTTATG TGTTCAGTCC TTGAGTATCATTTTCAGTACTTTGGGA GTTTAAGTTAGGTCTTCTTAGCCCCTTGAGTCTTTGACACCATCTTGTAGCGGATTTCGCGCTACAGCCTGGTAGTCACATGTGTTTCCCCGGCTGAACTGTATTGACATTTTTCTCTGGTTGTTGTATCAGCAATGTAAATTTAGTAGCAa                                                                                                                                           ]
[-] EMBL CA761392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               agacaAGGGGATGATTTGCTTCTCTGATAGTATAATAGTTATGATTCCTGCGAAGGTNTACGACCTTAAAATGTTCAGAGCAGCGAT GGGAGGATCATCTCCAAGATGACCT GATGGGTTCCTATTCTCATATGTAGTTCA TTGGGTGTCCAATATTTATCCGGTTTATTCATGTTATGTTGCGAGCTGCTCCATGTGCAACTTTATTCTGGACCTTATATGCTATTGAAAAGCGTCTTTTATG TGTTCAGTCC TTGAGTATCATTTTCAGTACTTTGGGA GTTTAAGTTAGGTCTTCTTAGCCCCTTGAGTCTTTGACACCATCTTGTAGCGGATTTCGCGCTACAGCCTGGTAGTCACATGTGTTTCCCCGGCTGAACTGTATTGACATTTTTCTCT GTTGTTGTATCAGCAATGTAAGTTTAGTAGCATTTTTTCTTTCAAGTAATATTTTCTCAGGAGACAGTCACTGCTGCCGTAAAACTGTTGCTGTAATCTTGTAAATTCCAAATTGGTAAGTCAATTAGTAGCAAATTCTCTGAAGGGTAAGGGTCAAAACAAAAAAAAAAAA]




>consensus_11985#0
CACTCTCATCTTCATCCTCAGCTCAGCTCAGCTCAGCTCAAGCTCAAAAGCCTTTTTTGT
TTGTTCGCTGCTGCCACTGTCCCCATCCTCCTCTCCTCGCTGCCGTTTGCTTCACTCCCA
CTGCTCCTCCTCCACGCGCGCGCGCGCGGGGGCTAGATCTCGCCGGAACCCTAGCCGGTA
ATGCCACGGGCGGCTGCCGCGGCGGGACAGTGAGGTGTTGAGGGGGTTTCCGGATCGATG
CATCGGGTGGCCATGGCTGCGGCGGCGGCGGGGGACGGCGGCGACGGGAGGGGGCGGACG
CTGGGGGCGGTCATCAAGGAGAAGGACGAGGAGCTGGCCCTCTTCCTCGAGATGCGCCGC
CGCGAGAAGGAGCGCGGCGCTGCTGCCGCTGCCGCGGCGGCCGAGCAGCTGCTGCTTTCC
GGGGACCGCGTCGACGTGGCGCGGGATGGGATGCTTCTCGTCGACCAACCGCCGCCGCGC
CCGCAGCCTCCCGCCGAGCACAAGGCGGCGGCGTACAGGATGACCGGCGGGTTCAGGAGA
GCGCCCGGCGGCGCCGACGACTTCCTCAATTCGGACGGCGGCGACAAGAACGATTACGAC
TGGCTTCTGACTCCACCAGGAACTCCACTTTTTCCATCTCTAGAAGAGTCAAAAAAGTCC
CCAGTGAGCCAAACTGGAACCCCAAAGACTCGCCCAACTGCCTTAAAATCAAGGTTGGCC
AATCATCCAGATCCTCCATCAAGAACAACCCTTCCATTGAGAGCAACATCATCAAACAAC
TTGAACTCAGCTGCCACAACACGTAGGCCGTCATCTTCTGGAGGGCACACATCTAATTCA
TCAAGGCCTTCAACACCAACTGGGCGGCCTGCACTGACCAATACCTCCAAAGGTTCAAGA
CCTTCAACCCCCACATCTCGGGCAACTGTACCTTCTAAGTCTGGACCTCCTGCCCCAAGA
TCATCAACTCCCACTTCCAGGTCAACACTTACTTCAGCAAGGTCAACAACACCTTCAAGA
ACATCTGGCCCTGCTACCAGGACATCAATTCCTTCAGGTAGAGCATCAGCACCAGCTAGC
AGGTCATCCACACCTACTTCAAGATCATCGATACCTGCTACCAGGTCATCCACGCCATCA
TCCAGGCCCTCCATACCAGCACAAAGCAAGCCAGTATCAAGGTCATCAACCCCAACAAGA
CGGCCTTCTGCCACTTCCACCCAACATGGTAGCTTGGCTGCACCAGTTCGATCTACCTCA
ATCTCCAAACCAGCCCCTACAATGTCCAAAAGTTCTTCACCGGCAAAAACTATAGCGTCA
ACACCTTCAAGGGGCAGCTCACCTACTGTCAAATCGAGACCATGGAAGCCATCTGAAATG
CCTGGCTTCTCACTTGACGCTCCTCCAAATCTGAGGACATCACTACCAGAAAGACCAACC
TCTGCTACTCGTGGCAGACCTGGAGCTCCTAGTTCTAGGTCTTCCTCTGTGGAGCCTGGG
CCAGCTGCTCGGCCAAGACGGCAGTCTTGCTCTCCTTCTAGAGGGAGGACTTTAAATGGT
AGTGTGCCTTCAGGTAGTTCGGTGCCAGCAGTGAGAAGATCACATCTTAATAGTGGTGAC
AGTGTCAATCCTGTTCAAATGGGTAATAAGATGGTTGAGAGGGTAGTGAACATGAGAAGG
CTAGTTCCTCCAAAACATGATGACCAAAGATCCAGCCTCAACGGTCTATCTGGAAAATCA
TCAAACTCTCCAGATAGCTCTGGCTTCGGTAGGACATTGTCAAAAAAGTCACTTGACATG
GCTCTTCGACATATGGACATACGGCGCAGCATTCCAAACAATTTACGGCCTCTTATGACA
AGCATACCAGCATCCTCTGTGCATAGCGCACGGTCAGGGTCTACAAGGAGCAGACCAATT
AGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTCAAC
AACAACCTGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGGGCA
GGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGG
TTTACGACCTTAAAATGTTCAGAGCAGCGATGGGAGGATCATCTCCAAGATGACCTGATG
GGTTCCTATTCTCATATGTAGTTCATTGGGTGTCCAATATTTATCCGGTTTATTCATGTT
ATGTTGCGAGCTGCTCCATGTGCAACTTTATTCTGGACCTTATATGCTATTGAAAAGCGT
CTTTTATGTGTTCAGTCCTTGAGTATCATTTTCAGTACTTTGGGAGTTTAAGTTAGGTCT
TCTTAGCCCCTTGAGTCTTTGACACCATCTTGTAGCGGATTTCGCGCTACAGCCTGGTAG
TCACATGTGTTTCCCCGGCTGAACTGTATTGACATTTTTCTCTGTTGTTGTATCAGCAAT
GTAAATTTAGTAGCATTTTTTCTTTCAAGTAATATTTTCTCAGGAGACAGTCACTGCTGC
CGTAAAACTGTTGCTGTAATCTTGTAAATTCCAAATTGGTAAGTCAATTAGTAGCAAATT
CTCTGAAGGGTAAGGGTCAAAACAAAAAAAAAAAA

consensusID : consensus_11985#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence

                              [CAGCATCCTCTGTGCATAGCGCACGGTCAGGGTNTACAAGGAGCAGACCAATTAGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTTTGAGCCGAGCGTCAACAACAACCTGATGTGCTTGGACAGCATCGAAATCGATNATGAGTTGTGCAGTGATAGGGCAGGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGGTTTNCGACCTTAAAATGTTCAGAGCAGCGATGGGAGGATCATNTCCAAGATGACCTGATGGGTTCCTATTNTCATATGTAGTTCATTGGGTGTCCAATATTTATCCCGGTTTATTCATGTTATGTTGCGAGCTGCTCCATGTGCAACTTTATTNTGGACCTTATATGCTATTGAAAAGCGTCTTTTATGTGTTCAAAAAAAAAAAAAAAA]

[+] EMBL AU174197             [CAGCATCCTCTGTGCATAGCGCACGGTCAGGGTNTACAAGGAGCAGACCAATTAGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTTTGAGCCGAGCGTCAACAACAACCTGATGTGCTTGGACAGCATCGAAATCGATNATGAGTTGTGCAGTGATAGGGCAGGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGGTTTNCGACCTTAAAATGTTCAGAGCAGCGATGGGAGGATCATNTCCAAGATGACCTGATGGGTTCCTATTNTCATATGTAGTTCATTGGGTGTCCAATATTTATCCCGGTTTATTCATGTTATGTTGCGAGCTGCTCCATGTGCAACTTTATTNTGGACCTTATATGCTATTGAAAAGCGTCTTTTATGTGTTCAAAAAAAAAAAAAAAA]




>consensus_11985#1
CAGCATCCTCTGTGCATAGCGCACGGTCAGGGTNTACAAGGAGCAGACCAATTAGTGTTT
CAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTTTGAGCCGAGCGTCAACAACAACC
TGATGTGCTTGGACAGCATCGAAATCGATNATGAGTTGTGCAGTGATAGGGCAGGACAAT
ACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGGTTTNCGA
CCTTAAAATGTTCAGAGCAGCGATGGGAGGATCATNTCCAAGATGACCTGATGGGTTCCT
ATTNTCATATGTAGTTCATTGGGTGTCCAATATTTATCCCGGTTTATTCATGTTATGTTG
CGAGCTGCTCCATGTGCAACTTTATTNTGGACCTTATATGCTATTGAAAAGCGTCTTTTA
TGTGTTCAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11985#0      CACTCTCATCTTCATCCTCAGCTCAGCTCAGCTCAGCTCAAGCTCAAAAGCCTTTTTTGT 60
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TTGTTCGCTGCTGCCACTGTCCCCATCCTCCTCTCCTCGCTGCCGTTTGCTTCACTCCCA 120
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CTGCTCCTCCTCCACGCGCGCGCGCGCGGGGGCTAGATCTCGCCGGAACCCTAGCCGGTA 180
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      ATGCCACGGGCGGCTGCCGCGGCGGGACAGTGAGGTGTTGAGGGGGTTTCCGGATCGATG 240
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CATCGGGTGGCCATGGCTGCGGCGGCGGCGGGGGACGGCGGCGACGGGAGGGGGCGGACG 300
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CTGGGGGCGGTCATCAAGGAGAAGGACGAGGAGCTGGCCCTCTTCCTCGAGATGCGCCGC 360
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CGCGAGAAGGAGCGCGGCGCTGCTGCCGCTGCCGCGGCGGCCGAGCAGCTGCTGCTTTCC 420
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      GGGGACCGCGTCGACGTGGCGCGGGATGGGATGCTTCTCGTCGACCAACCGCCGCCGCGC 480
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CCGCAGCCTCCCGCCGAGCACAAGGCGGCGGCGTACAGGATGACCGGCGGGTTCAGGAGA 540
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      GCGCCCGGCGGCGCCGACGACTTCCTCAATTCGGACGGCGGCGACAAGAACGATTACGAC 600
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TGGCTTCTGACTCCACCAGGAACTCCACTTTTTCCATCTCTAGAAGAGTCAAAAAAGTCC 660
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CCAGTGAGCCAAACTGGAACCCCAAAGACTCGCCCAACTGCCTTAAAATCAAGGTTGGCC 720
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      AATCATCCAGATCCTCCATCAAGAACAACCCTTCCATTGAGAGCAACATCATCAAACAAC 780
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TTGAACTCAGCTGCCACAACACGTAGGCCGTCATCTTCTGGAGGGCACACATCTAATTCA 840
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TCAAGGCCTTCAACACCAACTGGGCGGCCTGCACTGACCAATACCTCCAAAGGTTCAAGA 900
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CCTTCAACCCCCACATCTCGGGCAACTGTACCTTCTAAGTCTGGACCTCCTGCCCCAAGA 960
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TCATCAACTCCCACTTCCAGGTCAACACTTACTTCAGCAAGGTCAACAACACCTTCAAGA 1020
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      ACATCTGGCCCTGCTACCAGGACATCAATTCCTTCAGGTAGAGCATCAGCACCAGCTAGC 1080
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      AGGTCATCCACACCTACTTCAAGATCATCGATACCTGCTACCAGGTCATCCACGCCATCA 1140
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TCCAGGCCCTCCATACCAGCACAAAGCAAGCCAGTATCAAGGTCATCAACCCCAACAAGA 1200
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CGGCCTTCTGCCACTTCCACCCAACATGGTAGCTTGGCTGCACCAGTTCGATCTACCTCA 1260
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      ATCTCCAAACCAGCCCCTACAATGTCCAAAAGTTCTTCACCGGCAAAAACTATAGCGTCA 1320
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      ACACCTTCAAGGGGCAGCTCACCTACTGTCAAATCGAGACCATGGAAGCCATCTGAAATG 1380
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CCTGGCTTCTCACTTGACGCTCCTCCAAATCTGAGGACATCACTACCAGAAAGACCAACC 1440
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TCTGCTACTCGTGGCAGACCTGGAGCTCCTAGTTCTAGGTCTTCCTCTGTGGAGCCTGGG 1500
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CCAGCTGCTCGGCCAAGACGGCAGTCTTGCTCTCCTTCTAGAGGGAGGACTTTAAATGGT 1560
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      AGTGTGCCTTCAGGTAGTTCGGTGCCAGCAGTGAGAAGATCACATCTTAATAGTGGTGAC 1620
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      AGTGTCAATCCTGTTCAAATGGGTAATAAGATGGTTGAGAGGGTAGTGAACATGAGAAGG 1680
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CTAGTTCCTCCAAAACATGATGACCAAAGATCCAGCCTCAACGGTCTATCTGGAAAATCA 1740
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TCAAACTCTCCAGATAGCTCTGGCTTCGGTAGGACATTGTCAAAAAAGTCACTTGACATG 1800
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      GCTCTTCGACATATGGACATACGGCGCAGCATTCCAAACAATTTACGGCCTCTTATGACA 1860
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      AGCATACCAGCATCCTCTGTGCATAGCGCACGGTCAGGGTCTACAAGGAGCAGACCAATT 1920
consensus_11985#1      -------CAGCATCCTCTGTGCATAGCGCACGGTCAGGGTNTACAAGGAGCAGACCAATT 53
                              ********************************* *******************

consensus_11985#0      AGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTCTGAGCCGAGCGTCAAC 1980
consensus_11985#1      AGTGTTTCAGACTCTCCTCTTGCAACAAGCAGCAATGCCAGTTTTGAGCCGAGCGTCAAC 113
                       ******************************************* ****************

consensus_11985#0      AACAACCTGATGTGCTTGGACAGCATCGAAATCGATGATGAGTTGTGCAGTGATAGGGCA 2040
consensus_11985#1      AACAACCTGATGTGCTTGGACAGCATCGAAATCGATNATGAGTTGTGCAGTGATAGGGCA 173
                       ************************************ ***********************

consensus_11985#0      GGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGG 2100
consensus_11985#1      GGACAATACAGGCGATGATTTGCTTCTTTGATAGTATAATAGTTATGATTCCTGCGAAGG 233
                       ************************************************************

consensus_11985#0      TTTACGACCTTAAAATGTTCAGAGCAGCGATGGGAGGATCATCTCCAAGATGACCTGATG 2160
consensus_11985#1      TTTNCGACCTTAAAATGTTCAGAGCAGCGATGGGAGGATCATNTCCAAGATGACCTGATG 293
                       *** ************************************** *****************

consensus_11985#0      GGTTCCTATTCTCATATGTAGTTCATTGGGTGTCCAATATTTATCC-GGTTTATTCATGT 2219
consensus_11985#1      GGTTCCTATTNTCATATGTAGTTCATTGGGTGTCCAATATTTATCCCGGTTTATTCATGT 353
                       ********** *********************************** *************

consensus_11985#0      TATGTTGCGAGCTGCTCCATGTGCAACTTTATTCTGGACCTTATATGCTATTGAAAAGCG 2279
consensus_11985#1      TATGTTGCGAGCTGCTCCATGTGCAACTTTATTNTGGACCTTATATGCTATTGAAAAGCG 413
                       ********************************* **************************

consensus_11985#0      TCTTTTATGTGTTCAGTCCTTGAGTATCATTTTCAGTACTTTGGGAGTTTAAGTTAGGTC 2339
consensus_11985#1      TCTTTTATGTGTTCAAAAAAAAAAAAAAAA------------------------------ 443
                       ***************       *  *  *                               

consensus_11985#0      TTCTTAGCCCCTTGAGTCTTTGACACCATCTTGTAGCGGATTTCGCGCTACAGCCTGGTA 2399
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      GTCACATGTGTTTCCCCGGCTGAACTGTATTGACATTTTTCTCTGTTGTTGTATCAGCAA 2459
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TGTAAATTTAGTAGCATTTTTTCTTTCAAGTAATATTTTCTCAGGAGACAGTCACTGCTG 2519
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      CCGTAAAACTGTTGCTGTAATCTTGTAAATTCCAAATTGGTAAGTCAATTAGTAGCAAAT 2579
consensus_11985#1      ------------------------------------------------------------
                                                                                   

consensus_11985#0      TCTCTGAAGGGTAAGGGTCAAAACAAAAAAAAAAAA 2615
consensus_11985#1      ------------------------------------