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Oryza sativa
cluster # 1199 cluster # 1199       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1199#0 length = 3436 sequences # 2  

consensusID : consensus_1199#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3436
fasta sequence
                              [GAGAGCACCCATCCATCTCCCCGGAGGCGAAACCCTAACCCACCCAACCCATCGCCGCCGGCGAAAACCCTAATCCATCCGCCGCCGAACCGAAATGGGGAGACCTCGAGGCCGCGGCGGAGGAGGAGGAGGAGGGAGGGGGAGGTTCGGCGGCGGCGGGGGGTCCCGCTTCTCCGCCGCCCGCGATGACCCGCCGCCGCGGCGCTCCTCCTCCGGGTGGGGGGTGGCACCGCCGTCGCGGCACCTGTGGGTGGGCAGCCTCTCCCCGGGCGTCGCCGCGGCCGACCTCTCGGAGCTCTTCCTCCGGTGCGGCGACGTCGAGGGCATCTCCCGTGACCCCGGCCGGAGCTTCGCGTTCGTGACGTTCGCGCGGGAGGAGGACGCCGTGGCGGCGGTGCGGGAGCTGCAGGGGATCCACCTCCGCGGGGCGCCCATTAGGATCGAGTTTTCCAAGGGGGATAAAGATTCAAGTAGCTCTATGGATGACAGATACTCACAACATGCTGATCAAAGACGTTTTACTGAACGAGGAAGGAATCAGCAATCAAGTCCTGAAAAATCAACTGATAAATCCAAAAGAAGCAGGCCAGCAGAACCTAGTGAAGTATTATGGATAGGTTTTCCTGTTGGTCTGAAGGTAGATGAGGCAACTCTCTGGGAAGCCTTTTCACCTTTTGGTGAGGTTGTCAAGATAACTACATTCCCAGGGCGTACTTATGCATTTGTCCAGTACACTACTATTGCAGCGGCATGCAGGGCGAAGGAAACACTGCAGGGAAATATTTTCAATAACCCTCGAGTTAGCATTTGCTTTTCTCGGAGTGACAGTGTTTCAGCAGAATTTGGAAAAGGTTCCTTAGATGCCCCATATTCCCCCCATTTAAACTCTAGTGTTAGACCTATATTCAGGGAGCAAGATTTTGAAGATTTTCCTAGGGCTAGGCCTTTTGATAGTCCTCCAAGAGATATGTACATGCCATCTCCACATTATGGCCCTAAGAGACTTTCTAGAGATCATGATGATGTGGGTTTCAGCAGGGATAATTATTTGCGATATGGACCTGGAGTAGAGCCTGATCCTAGATCTAATTTTGAACCTTTTAGGATACAAGGGCTCGGTCCAGAAAGAAGGATGTCTGAGGACCCATATGAACAGCATAGGCGTAGCCCTGCTGGTGATGCACCATGGCACAACATTCCATTCGAGCGATCTCAGGGAGCCTTACCATTAGAGGATTCTCGGTATGCTAGGGAAGATCCATACCCATTTTCAAAGAAGTTGAGGACTGGTGAAGCACATGACTCTGAACTTCCTGAATACCCTTTCTCTGAATTTGATCGAGGGAAGGTTGGCTCTGCCTACCCAAGGAGGCCCTTCTATGGTGTGCCAGATGATGACATACACCCCAGAGGCTATCAACTTGCTCCTATGCATGGTAGAAATCATGTTGATCCTTTAAGGAATCCAACTCCACTTGTAGATAGGCATATACCAGGGCATGCACAGGACAGCTTTTCTAGGCATGTAGAAGTGGAAAGATCAACTCCTGAATACCATGAACCCCTTCTCAAGGAAGAATGGAAATGGGATGGTACAATAGCAAAGGGAGGCACACCAATTTGCCGAGCGCGATGCTTCCCTGTTGGGAAGGTTCTTAACTTCATGCTGCCCGAATTTTTGGATTGCACTGCTAGGACAAGCCTGGAGATGCTCTCTAAGCACTATTACCAAGCTGCCAGCAGCTGGGTGGTGTTTTTTGTTCCAGAAAATGATGCTGACATGGCAGCCTATAATGAATTCATGAATTACCTTGGTGATAAGCAGCGTGCAGCAGTTTGTAAACTTGGAGAAAGGAGCAGCTTATTTCTTGTTCCACCCTCAGACTTCTCTGAACAAGTACTGAGGGTTCCAGGTAAAGTCAGCATATCTGGAGTCATTCTGAAGTTTGAGCAGTCAGATCCAGAAGTTTCCTCGCCAACTCGCAAACCAGAAACATTTGTGAGTCATTTGAACCATGATGTTCGTGCTCATGAGGATCTAGATGCATTGAGAAGAATCAACCCACCAGATATCAGGCCACTTCCTCAGGGTTCAGATTATCTCGGGTTGTCGCCTGGAAGCTATAATCCAGCAAGTGCACATTTGGTTCCGCCTTACAAGTTTGGAAATGCTCCTTCATATCTAGAATCTGAATTAGCTCATCAAAAGCATCCACCTGACTCCCACAGGGAGATAGCACATGACAAGCAGCAGCAACACCCAGATGTATTGCCCTCAAGATGGTCAGATAACATTTACAATCCAAGTCCAGGTTCTGGAAATTTGAATTATTTGGCTGAGAGTGCGATCCCACATACATCAACTGATAGGACACCAGAGGCATACTCATTTGCTCCTCAAGGAGTACCAAAAGTGAGTACATCAGGGTATGCACCAGTTGCAGATGAGGCATCAAACATGTCCTACCCTCCCATGCAACCTGCATCACAGCAGGTAGTTAGACCTCAACAACCTCCATCTCTCCCATTATCGCTTCCACCAGAGCAACTTGCACAATTGGCCACTCTTCTTGCACAACAAAACCAACCAGGAAAAGAGCCTGTGGACAGCTTAAACAAAGAATCAGGATTCATACGGAATCCACATGGACATTCTTCAATGATGCCACACAGCTCAGGTTCTATCCCTGTCCAAAACTCATTGCCACCTGCTCCGCCATCTGCATCACAGTTACAGGTTCATGCGCCACCAGTTCAAGGTTCAGTGCCACCAAATCCATCCATTATGCATACACCGAATGCTCCTATGCCTTCTCACAACACTTTGCCTTTACCCCCTATGCATCCTTCGGGAAATCCAGCTCATTCTTCCATGCCTTTGAGATCGTTCGTCCCTCCTCTTCCTGAAGGCCCTCCACCCCTTAGGCAGCACACATCAAGTGCTCTACAAGCGCAACCTGCACTTCCCTCTGGACCACAGACTAGCCAGCAACCGTCTGCTCAGGAAGACCATCACGGAGACCCTCAAAAGCGCCTTCAAGCAACATTGCAATTGGCAGCAACCCTACTTCAGCAGATACAGCAACAATCTAAACCTGGTGGCCAGAAGTAGATGCGAGGTTAAGGAAATTTGCAGCCTGCAAGGATCATATGGTGATATTTTCTCCTTATTACTGAAGAGCCTGAGAGTCTGAAACTGCTGGTGGGCACCCATACCTATACCGGATGTTTTGTTAACATAGGTTCTGCTATGAATTAGCATTGCAGTTTAATTTTGAAAGCTTACTCCTAGGTGGCAACCACCTCCGTTGTCTTGTCTGTATAAGATTGCACCGTTCATCTTTTCTCTCTGTTTTTGTGTTAATCAATGCATAGACCCATGAATACCACTTCCCTTTTTGCATTCATACATCATGCATTCGTCTCATCGATGTGT]

[+] EMBL AK100889             [GAGAGCACCCATCCATCTCCCCGGAGGCGAAACCCTAACCCACCCAACCCATCGCCGCCGGCGAAAACCCTAATCCATCCGCCGCCGAACCGAAATGGGGAGACCTCGAGGCCGCGGCGGAGGAGGAGGAGGAGGGAGGGGGAGGTTCGGCGGCGGCGGGGGGTCCCGCTTCTCCGCCGCCCGCGATGACCCGCCGCCGCGGCGCTCCTCCTCCGGGTGGGGGGTGGCACCGCCGTCGCGGCACCTGTGGGTGGGCAGCCTCTCCCCGGGCGTCGCCGCGGCCGACCTCTCGGAGCTCTTCCTCCGGTGCGGCGACGTCGAGGGCATCTCCCGTGACCCCGGCCGGAGCTTCGCGTTCGTGACGTTCGCGCGGGAGGAGGACGCCGTGGCGGCGGTGCGGGAGCTGCAGGGGATCCACCTCCGCGGGGCGCCCATTAGGATCGAGTTTTCCAAGGGGGATAAAGATTCAAGTAGCTCTATGGATGACAGATACTCACAACATGCTGATCAAAGACGTTTTACTGAACGAGGAAGGAATCAGCAATCAAGTCCTGAAAAATCAACTGATAAATCCAAAAGAAGCAGGCCAGCAGAACCTAGTGAAGTATTATGGATAGGTTTTCCTGTTGGTCTGAAGGTAGATGAGGCAACTCTCTGGGAAGCCTTTTCACCTTTTGGTGAGGTTGTCAAGATAACTACATTCCCAGGGCGTACTTATGCATTTGTCCAGTACACTACTATTGCAGCGGCATGCAGGGCGAAGGAAACACTGCAGGGAAATATTTTCAATAACCCTCGAGTTAGCATTTGCTTTTCTCGGAGTGACAGTGTTTCAGCAGAATTTGGAAAAGGTTCCTTAGATGCCCCATATTCCCCCCATTTAAACTCTAGTGTTAGACCTATATTCAGGGAGCAAGATTTTGAAGATTTTCCTAGGGCTAGGCCTTTTGATAGTCCTCCAAGAGATATGTACATGCCATCTCCACATTATGGCCCTAAGAGACTTTCTAGAGATCATGATGATGTGGGTTTCAGCAGGGATAATTATTTGCGATATGGACCTGGAGTAGAGCCTGATCCTAGATCTAATTTTGAACCTTTTAGGATACAAGGGCTCGGTCCAGAAAGAAGGATGTCTGAGGACCCATATGAACAGCATAGGCGTAGCCCTGCTGGTGATGCACCATGGCACAACATTCCATTCGAGCGATCTCAGGGAGCCTTACCATTAGAGGATTCTCGGTATGCTAGGGAAGATCCATACCCATTTTCAAAGAAGTTGAGGACTGGTGAAGCACATGACTCTGAACTTCCTGAATACCCTTTCTCTGAATTTGATCGAGGGAAGGTTGGCTCTGCCTACCCAAGGAGGCCCTTCTATGGTGTGCCAGATGATGACATACACCCCAGAGGCTATCAACTTGCTCCTATGCATGGTAGAAATCATGTTGATCCTTTAAGGAATCCAACTCCACTTGTAGATAGGCATATACCAGGGCATGCACAGGACAGCTTTTCTAGGCATGTAGAAGTGGAAAGATCAACTCCTGAATACCATGAACCCCTTCTCAAGGAAGAATGGAAATGGGATGGTACAATAGCAAAGGGAGGCACACCAATTTGCCGAGCGCGATGCTTCCCTGTTGGGAAGGTTCTTAACTTCATGCTGCCCGAATTTTTGGATTGCACTGCTAGGACAAGCCTGGAGATGCTCTCTAAGCACTATTACCAAGCTGCCAGCAGCTGGGTGGTGTTTTTTGTTCCAGAAAATGATGCTGACATGGCAGCCTATAATGAATTCATGAATTACCTTGGTGATAAGCAGCGTGCAGCAGTTTGTAAACTTGGAGAAAGGAGCAGCTTATTTCTTGTTCCACCCTCAGACTTCTCTGAACAAGTACTGAGGGTTCCAGGTAAAGTCAGCATATCTGGAGTCATTCTGAAGTTTGAGCAGTCAGATCCAGAAGTTTCCTCGCCAACTCGCAAACCAGAAACATTTGTGAGTCATTTGAACCATGATGTTCGTGCTCATGAGGATCTAGATGCATTGAGAAGAATCAACCCACCAGATATCAGGCCACTTCCTCAGGGTTCAGATTATCTCGGGTTGTCGCCTGGAAGCTATAATCCAGCAAGTGCACATTTGGTTCCGCCTTACAAGTTTGGAAATGCTCCTTCATATCTAGAATCTGAATTAGCTCATCAAAAGCATCCACCTGACTCCCACAGGGAGATAGCACATGACAAGCAGCAGCAACACCCAGATGTATTGCCCTCAAGATGGTCAGATAACATTTACAATCCAAGTCCAGGTTCTGGAAATTTGAATTATTTGGCTGAGAGTGCGATCCCACATACATCAACTGATAGGACACCAGAGGCATACTCATTTGCTCCTCAAGGAGTACCAAAAGTGAGTACATCAGGGTATGCACCAGTTGCAGATGAGGCATCAAACATGTCCTACCCTCCCATGCAACCTGCATCACAGCAGGTAGTTAGACCTCAACAACCTCCATCTCTCCCATTATCGCTTCCACCAGAGCAACTTGCACAATTGGCCACTCTTCTTGCACAACAAAACCAACCAGGAAAAGAGCCTGTGGACAGCTTAAACAAAGAATCAGGATTCATACGGAATCCACATGGACATTCTTCAATGATGCCACACAGCTCAGGTTCTATCCCTGTCCAAAACTCATTGCCACCTGCTCCGCCATCTGCATCACAGTTACAGGTTCATGCGCCACCAGTTCAAGGTTCAGTGCCACCAAATCCATCCATTATGCATACACCGAATGCTCCTATGCCTTCTCACAACACTTTGCCTTTACCCCCTATGCATCCTTCGGGAAATCCAGCTCATTCTTCCATGCCTTTGAGATCGTTCGTCCCTCCTCTTCCTGAAGGCCCTCCACCCCTTAGGCAGCACACATCAAGTGCTCTACAAGCGCAACCTGCACTTCCCTCTGGACCACAGACTAGCCAGCAACCGTCTGCTCAGGAAGACCATCACGGAGACCCTCAAAAGCGCCTTCAAGCAACATTGCAATTGGCAGCAACCCTACTTCAGCAGATACAGCAACAATCTAAACCTGGTGGCCAGAAGTAGATGCGAGGTTAAGGAAATTTGCAGCCTGCAAGGATCATATGGTGATATTTTCTCCTTATTACTGAAGAGCCTGAGAGTCTGAAACTGCTGGTGGGCACCCATACCTATACCGGATGTTTTGTTAACATAGGTTCTGCTATGAATTAGCATTGCAGTTTAATTTTGAAAGCTTACTCCTAGGTGGCAACCACCTCCGTTGTCTTGTCTGTATAAGATTGCACCGTTCATCTTTTCTCTCTGTTTTTGTGTTAATCAATGCATAGACCCATGAATACCACTTCCCTTTTTGCATTCATACATCATGCATTCGTCTCATCGATGTGT]
[+] EMBL C28219               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGGATAATNATTTGCAATATGGACCTGGAGTAGAGCCTGATCCTAGATCTAATTTTNAACCTTTTAGGATACAAGGGCTCGGTCCAGAAAGAAGGATGTCTGAGGACCCATATGAACAGCATAGGCGTA CCNTGCTGGTGATGCACCATGGCACAACATTCCATTCGAGCGATCTCAGGGAGCCTTACCATTAGAGGATTCTCGGTATGCTAGGGAAGATCCATACCCATTTTCAAAGAAGTTGAGGACTGGTGAAGCACATGACTCTGAACTTCCTGAATACCCTTTCTCTGAATTTNATCGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_1199#0 GAGAGCACCCATCCATCTCCCCGGAGGCGAAACCCTAACCCACCCAACCCATCGCCGCCG GCGAAAACCCTAATCCATCCGCCGCCGAACCGAAATGGGGAGACCTCGAGGCCGCGGCGG AGGAGGAGGAGGAGGGAGGGGGAGGTTCGGCGGCGGCGGGGGGTCCCGCTTCTCCGCCGC CCGCGATGACCCGCCGCCGCGGCGCTCCTCCTCCGGGTGGGGGGTGGCACCGCCGTCGCG GCACCTGTGGGTGGGCAGCCTCTCCCCGGGCGTCGCCGCGGCCGACCTCTCGGAGCTCTT CCTCCGGTGCGGCGACGTCGAGGGCATCTCCCGTGACCCCGGCCGGAGCTTCGCGTTCGT GACGTTCGCGCGGGAGGAGGACGCCGTGGCGGCGGTGCGGGAGCTGCAGGGGATCCACCT CCGCGGGGCGCCCATTAGGATCGAGTTTTCCAAGGGGGATAAAGATTCAAGTAGCTCTAT GGATGACAGATACTCACAACATGCTGATCAAAGACGTTTTACTGAACGAGGAAGGAATCA GCAATCAAGTCCTGAAAAATCAACTGATAAATCCAAAAGAAGCAGGCCAGCAGAACCTAG TGAAGTATTATGGATAGGTTTTCCTGTTGGTCTGAAGGTAGATGAGGCAACTCTCTGGGA AGCCTTTTCACCTTTTGGTGAGGTTGTCAAGATAACTACATTCCCAGGGCGTACTTATGC ATTTGTCCAGTACACTACTATTGCAGCGGCATGCAGGGCGAAGGAAACACTGCAGGGAAA TATTTTCAATAACCCTCGAGTTAGCATTTGCTTTTCTCGGAGTGACAGTGTTTCAGCAGA ATTTGGAAAAGGTTCCTTAGATGCCCCATATTCCCCCCATTTAAACTCTAGTGTTAGACC TATATTCAGGGAGCAAGATTTTGAAGATTTTCCTAGGGCTAGGCCTTTTGATAGTCCTCC AAGAGATATGTACATGCCATCTCCACATTATGGCCCTAAGAGACTTTCTAGAGATCATGA TGATGTGGGTTTCAGCAGGGATAATTATTTGCGATATGGACCTGGAGTAGAGCCTGATCC TAGATCTAATTTTGAACCTTTTAGGATACAAGGGCTCGGTCCAGAAAGAAGGATGTCTGA GGACCCATATGAACAGCATAGGCGTAGCCCTGCTGGTGATGCACCATGGCACAACATTCC ATTCGAGCGATCTCAGGGAGCCTTACCATTAGAGGATTCTCGGTATGCTAGGGAAGATCC ATACCCATTTTCAAAGAAGTTGAGGACTGGTGAAGCACATGACTCTGAACTTCCTGAATA CCCTTTCTCTGAATTTGATCGAGGGAAGGTTGGCTCTGCCTACCCAAGGAGGCCCTTCTA TGGTGTGCCAGATGATGACATACACCCCAGAGGCTATCAACTTGCTCCTATGCATGGTAG AAATCATGTTGATCCTTTAAGGAATCCAACTCCACTTGTAGATAGGCATATACCAGGGCA TGCACAGGACAGCTTTTCTAGGCATGTAGAAGTGGAAAGATCAACTCCTGAATACCATGA ACCCCTTCTCAAGGAAGAATGGAAATGGGATGGTACAATAGCAAAGGGAGGCACACCAAT TTGCCGAGCGCGATGCTTCCCTGTTGGGAAGGTTCTTAACTTCATGCTGCCCGAATTTTT GGATTGCACTGCTAGGACAAGCCTGGAGATGCTCTCTAAGCACTATTACCAAGCTGCCAG CAGCTGGGTGGTGTTTTTTGTTCCAGAAAATGATGCTGACATGGCAGCCTATAATGAATT CATGAATTACCTTGGTGATAAGCAGCGTGCAGCAGTTTGTAAACTTGGAGAAAGGAGCAG CTTATTTCTTGTTCCACCCTCAGACTTCTCTGAACAAGTACTGAGGGTTCCAGGTAAAGT CAGCATATCTGGAGTCATTCTGAAGTTTGAGCAGTCAGATCCAGAAGTTTCCTCGCCAAC TCGCAAACCAGAAACATTTGTGAGTCATTTGAACCATGATGTTCGTGCTCATGAGGATCT AGATGCATTGAGAAGAATCAACCCACCAGATATCAGGCCACTTCCTCAGGGTTCAGATTA TCTCGGGTTGTCGCCTGGAAGCTATAATCCAGCAAGTGCACATTTGGTTCCGCCTTACAA GTTTGGAAATGCTCCTTCATATCTAGAATCTGAATTAGCTCATCAAAAGCATCCACCTGA CTCCCACAGGGAGATAGCACATGACAAGCAGCAGCAACACCCAGATGTATTGCCCTCAAG ATGGTCAGATAACATTTACAATCCAAGTCCAGGTTCTGGAAATTTGAATTATTTGGCTGA GAGTGCGATCCCACATACATCAACTGATAGGACACCAGAGGCATACTCATTTGCTCCTCA AGGAGTACCAAAAGTGAGTACATCAGGGTATGCACCAGTTGCAGATGAGGCATCAAACAT GTCCTACCCTCCCATGCAACCTGCATCACAGCAGGTAGTTAGACCTCAACAACCTCCATC TCTCCCATTATCGCTTCCACCAGAGCAACTTGCACAATTGGCCACTCTTCTTGCACAACA AAACCAACCAGGAAAAGAGCCTGTGGACAGCTTAAACAAAGAATCAGGATTCATACGGAA TCCACATGGACATTCTTCAATGATGCCACACAGCTCAGGTTCTATCCCTGTCCAAAACTC ATTGCCACCTGCTCCGCCATCTGCATCACAGTTACAGGTTCATGCGCCACCAGTTCAAGG TTCAGTGCCACCAAATCCATCCATTATGCATACACCGAATGCTCCTATGCCTTCTCACAA CACTTTGCCTTTACCCCCTATGCATCCTTCGGGAAATCCAGCTCATTCTTCCATGCCTTT GAGATCGTTCGTCCCTCCTCTTCCTGAAGGCCCTCCACCCCTTAGGCAGCACACATCAAG TGCTCTACAAGCGCAACCTGCACTTCCCTCTGGACCACAGACTAGCCAGCAACCGTCTGC TCAGGAAGACCATCACGGAGACCCTCAAAAGCGCCTTCAAGCAACATTGCAATTGGCAGC AACCCTACTTCAGCAGATACAGCAACAATCTAAACCTGGTGGCCAGAAGTAGATGCGAGG TTAAGGAAATTTGCAGCCTGCAAGGATCATATGGTGATATTTTCTCCTTATTACTGAAGA GCCTGAGAGTCTGAAACTGCTGGTGGGCACCCATACCTATACCGGATGTTTTGTTAACAT AGGTTCTGCTATGAATTAGCATTGCAGTTTAATTTTGAAAGCTTACTCCTAGGTGGCAAC CACCTCCGTTGTCTTGTCTGTATAAGATTGCACCGTTCATCTTTTCTCTCTGTTTTTGTG TTAATCAATGCATAGACCCATGAATACCACTTCCCTTTTTGCATTCATACATCATGCATT CGTCTCATCGATGTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)