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Oryza sativa
cluster # 12008 cluster # 12008       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12008#0 length = 1401 sequences # 5  
consensus_12008#1 length = 1102 sequences # 3  
consensus_12008#2 length = 173 sequences # 1  

consensusID : consensus_12008#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1401
fasta sequence
                              [CTCTCTCCTCTCCTCTCCTACCATGGAGCCCGACGCCTCCTCCGCCGCCGCCGCCCAAAACCCTAACCCTAACCCTAGCACGGGGCTGCCGCCCATCTCCGCCTACTACCAGACGCGCGCGGAGNACCACGCCGTCGTCTCCAGCGACTGGCTCGCGCACGCCGCCGCCGCGGCCTCGCTCCCTCCCTCCTCCGATGCCGCCGACGCGGACGCCGCCTCCGACGCCGCGGCGCTGCTCTCCCCCGGGAGCAACGGCGGCGGCGGCGGGGTGATCGAGGAGTTCAACTTCTGGCGCCGCAAGCCCGAGGCCGCGGAGGCCGTGGCGGCCATCATGGCGCTCGCCGCCGTCATCCGCTCCAGCAGGGCCACCACCATGATGGAGCTCGAGATCGAGCTCAAGAAGGCATCCGACAAGCTCAAGTCTTGGGATGCCACTTCCATTTCTTTGTCTGCCGCATGTGATTTGTTCATGCGGTTTGTAACAAGAACATCACATTTGGAGCATGAGAAGTTTGATGCTGCAAAATCACGCCTAATTGAGAGGGGAGAAAAATTTGGAGAGATATCCTTAAAGGCTCGTAAGACAATTGCAATGCTCAGCCAGGATTTTATTTCAGATGGTTGTACTATTCTGGTACATGGTTATTCCAGAGTTGTTTTGGAAGTTCTAAAGCTAGCTGCATCAAAACCGCAAACTCTTCAGGGTACTTTGCACAGAGGGCAGGCCGGACAGAACTGGTTTACGAATGTCAAATGAACTGGCAGCATTAGGCATTCCTGTTAAGGTGCTAATTGATTCAGCTGTTGCTTATTCCATGGATGAAGTTGACATGGTGTTTGTTGGTGCTGATGGGGTTGTTGAAAGTGGAGGAATAATCAATATGATGGGCACTTATCAGATAGCTCTCGTCGCTCACAGTATGAACAAACCTGTTTATGTGGCTGCTGAAAGTTACAAGTTTGCACGCCTATATCCGTTGGACCAGAAGGACATGACACCAGCTCACCGACCCATTGATTTTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCCTCCCCAGTATCTTACGCTGCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAGCGATGAGCTTATCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTACCGCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTATTTGCCCTTTACGTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTTTGTCTAAAGCATCTATCTGGTGTTAATAGTTTTGGTGTTGGTTGCGAAGATGGTCTGGATTGCATTTTGCAAAAAAAAAAAAA]

[+] EMBL AK068908             [CTCTCTCCTCTCCTCTCCTACCATGGAGCCCGACGCCTCCTCCGCCGCCGCCGCCCAAAACCCTAACCCTAACCCTAGCACGGGGCTGCCGCCCATCTCCGCCTACTACCAGACGCGCGCGGAGCACCACGCCGTCGTCTCCAGCGACTGGCTCGCGCACGCCGCCGCCGCGGCCTCGCTCCCTCCCTCCTCCGATGCCGCCGACGCGGACGCCGCCTCCGACGCCGCGGCGCTGCTCTCCCCCGGGAGCAACGGCGGCGGCGGCGGGGTGATCGAGGAGTTCAACTTCTGGCGCCGCAAGCCCGAGGCCGCGGAGGCCGTGGCGGCCATCATGGCGCTCGCCGCCGTCATCCGCTCCAGCAGGGCCACCACCATGATGGAGCTCGAGATCGAGCTCAAGAAGGCATCCGACAAGCTCAAGTCTTGGGATGCCACTTCCATTTCTTTGTCTGCCGCATGTGATTTGTTCATGCGGTTTGTAACAAGAACATCACATTTGGAGCATGAGAAGTTTGATGCTGCAAAATCACGCCTAATTGAGAGGGGAGAAAAATTTGGAGAGATATCCTTAAAGGCTCGTAAGACAATTGCAATGCTCAGCCAGGATTTTATTTCAGATGGTTGTACTATTCTGGTACATGGTTATTCCAGAGTTGTTTTGGAAGTTCTAAAGCTAGCTGCATCAAAACCGCAAACTCTTCAGGGTACTTTGCACAGAGGGCAGGCCGGACAGAACTGGTTTACGAATGTCAAATGAACTGGCAGCATTAGGCATTCCTGTTAAGGTGCTAATTGATTCAGCTGTTGCTTATTCCATGGATGAAGTTGACATGGTGTTTGTTGGTGCTGATGGGGTTGTTGAAAGTGGAGGAATAATCAATATGATGGGCACTTATCAGATAGCTCTCGTCGCTCACAGTATGAACAAACCTGTTTATGTGGCTGCTGAAAGTTACAAGTTTGCACGCCTATATCCGTTGGACCAGAAGGACATGACACCAGCTCACCGACCCATTGATTTTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCCTCCCCAGTATCTTACGCTGCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAGCGATGAGCTTATCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTACCGCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTATTTGCCCTTTACGTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTTTGTCTAAAGCATCTATCTGGTGTTAATAGTTTTGGT                                               ]
[+] EMBL AU070005             [                              CGACGCCTCCTCCGCCGCCGCCGCCCAAAACCCTAACCCTAACCCTAGCACGGGGCTGCCGCCCATCTCCGCCTACTACCAGACGCGCGCGGA NACCACGCCGTCGTCTCCAGCGACTGGCTCGCGCACGCCGCCGCCGCGGCCTCGCTCCCTCCCTCCTCCGATGCCGCCGACGCGGACGCCGCCTCCGACGCCGCGGCGCTGCTCTCCCCCGGGAGCAACGGCGGCGGCGGCGGGGTGATCGAGGAGTTCAACTTCTGGCGCCGCAAGCCCGAGGCCGCGGAGGCCGTGGCGGNCATCATGGCGCTCGCCGCCGTCATCCGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU078689             [                                 CGCCTCCNCCGCCGCCGCCGCCCAAAACCCTAACCCTAACCCTAGCACGGGGCTGCCGCCCATCTCCGCCTACTACCAGACGCGCGCNGAG ACCACGCCGTCGTCTCCAGCGACTGGCTCGCGCACGCNGCCGCCGCGGNCTCGCTCCCTCCCTCCTCCGATGCCGCCGACGCGGACGCCGCCTCCGACGCCGCGGCGCTGCTCTCCCCCGGGAGCAACGGCGGCGGCGGCGGGGTGATCGAGGAGTTCAACTTCTGGCGCCGCAAGCTCGAGGCCGCGGAGGCCGTNGCGGCCATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU068803             [                                                                         CCTAGCACGGGGCTGCCGCCCATNTCCGCCTACTACCAGACGCGCGCGGA NACCACGCCGTCNTCTCCANCGACTGGNTCGCGNACGCNGCCGCCGCGCCATCGCTCCCTCCCTCCTCCGATGCCGCCGACGCGGACGCCGCCTCCNACGCCGCGGCGCTGCTCTCCCCCGGNAGCAACGGCGGCGGCGGCGGGGTGATCGAGGAGTTCAACTTCTGGCGCCGCAAGCCCGAGGCCGCGGAGGCNGTGGCGGCCATCATGGCGCTCGCGGCCGTCAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU029681             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAGTGGAGGNATAATCAATATGATGGGCACTTATCAGATNGCTCTCGTCGCTCACAGTATGAACAAACCTGTTTATGTGGCTGCTGAAAGTTACAAGTTTGCACGCCTATATCCGTTGGACCAGAAGGACATGACACCAGCTCACCGACCCATTGATTTTGGCGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCCTCCCCAGTATCTTACGCTGCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAGCGATGAGCTTATCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTACCGCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTATTTGCCCTTTACGTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTTTGTCTAAAGCATCTATCTGGTGTTAATAGTTTTGGTGTTGGTTGCGAAGATGGTCTGGATTGCATTTTGCAAAAAAAAAAAAA]


>consensus_12008#0 CTCTCTCCTCTCCTCTCCTACCATGGAGCCCGACGCCTCCTCCGCCGCCGCCGCCCAAAA CCCTAACCCTAACCCTAGCACGGGGCTGCCGCCCATCTCCGCCTACTACCAGACGCGCGC GGAGNACCACGCCGTCGTCTCCAGCGACTGGCTCGCGCACGCCGCCGCCGCGGCCTCGCT CCCTCCCTCCTCCGATGCCGCCGACGCGGACGCCGCCTCCGACGCCGCGGCGCTGCTCTC CCCCGGGAGCAACGGCGGCGGCGGCGGGGTGATCGAGGAGTTCAACTTCTGGCGCCGCAA GCCCGAGGCCGCGGAGGCCGTGGCGGCCATCATGGCGCTCGCCGCCGTCATCCGCTCCAG CAGGGCCACCACCATGATGGAGCTCGAGATCGAGCTCAAGAAGGCATCCGACAAGCTCAA GTCTTGGGATGCCACTTCCATTTCTTTGTCTGCCGCATGTGATTTGTTCATGCGGTTTGT AACAAGAACATCACATTTGGAGCATGAGAAGTTTGATGCTGCAAAATCACGCCTAATTGA GAGGGGAGAAAAATTTGGAGAGATATCCTTAAAGGCTCGTAAGACAATTGCAATGCTCAG CCAGGATTTTATTTCAGATGGTTGTACTATTCTGGTACATGGTTATTCCAGAGTTGTTTT GGAAGTTCTAAAGCTAGCTGCATCAAAACCGCAAACTCTTCAGGGTACTTTGCACAGAGG GCAGGCCGGACAGAACTGGTTTACGAATGTCAAATGAACTGGCAGCATTAGGCATTCCTG TTAAGGTGCTAATTGATTCAGCTGTTGCTTATTCCATGGATGAAGTTGACATGGTGTTTG TTGGTGCTGATGGGGTTGTTGAAAGTGGAGGAATAATCAATATGATGGGCACTTATCAGA TAGCTCTCGTCGCTCACAGTATGAACAAACCTGTTTATGTGGCTGCTGAAAGTTACAAGT TTGCACGCCTATATCCGTTGGACCAGAAGGACATGACACCAGCTCACCGACCCATTGATT TTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCCTC CCCAGTATCTTACGCTGCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAGCG ATGAGCTTATCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTACC GCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTATTTGCCCTTTACGT GGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTTTG TCTAAAGCATCTATCTGGTGTTAATAGTTTTGGTGTTGGTTGCGAAGATGGTCTGGATTG CATTTTGCAAAAAAAAAAAAA



consensusID : consensus_12008#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1102
fasta sequence
                              [CGACGCCTCCTCCGCCGCCGCCGCCCAAAACCCTAACCCTAACCCTAGCACGGGGCTGCCGCCCATCTCCGCCGTCATCCGCTCCAGCAGGGCCACCACCATGATGGAGCTCGAGATCGAGCTCAAGAAGGCATCCGACAAGCTCAAGTCTTGGGATGCCACTTCCATTTCTTTGTCTGCCGCATGTGATTTGTTCATGCGGTTTGTAACAAGAACATCACATTTGGAGCATGAGAAGTTTGATGCTGCAAAATCACGCCTAATTGAGAGGGGAGAAAAATTTGGAGAGATATCCTTAAAGGCTCGTAAGACAATTGCAATGCTCAGCCAGGATTTTATTTCAGATGGTTGTACTATTCTGGTACATGGTTATTCCAGAGTTGTTTTGGAAGTTCTAAAGCTAGCTGCATCAAACCGCAAACTCTTCAGGGTACTTTGCACAGAGGGCAGGCCGGACAGAACTGGTTTACGAATGTCAAATGAACTGGCAGCATTAGGCATTCCTGTTAAGGTGCTAATTGATTCAGCTGTTGCTTATTCCATGGATGAAGTTGACATGGTGTTTGTTGGTGCTGATGGGGTTGTTGAAAGTGGAGGAATAATCAATATGATGGGCACTTATCAGATAGCTCTCGTCGCTCACAGTATGAACAAACCTGTTTATGTGGCTGCTGAAAGTTACAAGTTTGCACGCCTATATCCGTTGGACCAGAAGGACATGACACCAGCTCACCGACCCATTGATTTTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCCTCCCCAGTATCTTACGCTGCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAGCGATGAGCTTATCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTACCGCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTAT-TT-GCCCTTTAC-GTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTTTGTCTAAAGCATCTATCTGGTGTTAATAGTTTTGGTGTTGGTTGCGAAGATGGTCTGG]

[+] EMBL AK071243             [CGACGCCTCCTCCGCCGCCGCCGCCCAAAACCCTAACCCTAACCCTAGCACGGGGCTGCCGCCCATCTCCGCCGTCATCCGCTCCAGCAGGGCCACCACCATGATGGAGCTCGAGATCGAGCTCAAGAAGGCATCCGACAAGCTCAAGTCTTGGGATGCCACTTCCATTTCTTTGTCTGCCGCATGTGATTTGTTCATGCGGTTTGTAACAAGAACATCACATTTGGAGCATGAGAAGTTTGATGCTGCAAAATCACGCCTAATTGAGAGGGGAGAAAAATTTGGAGAGATATCCTTAAAGGCTCGTAAGACAATTGCAATGCTCAGCCAGGATTTTATTTCAGATGGTTGTACTATTCTGGTACATGGTTATTCCAGAGTTGTTTTGGAAGTTCTAAAGCTAGCTGCATCAAACCGCAAACTCTTCAGGGTACTTTGCACAGAGGGCAGGCCGGACAGAACTGGTTTACGAATGTCAAATGAACTGGCAGCATTAGGCATTCCTGTTAAGGTGCTAATTGATTCAGCTGTTGCTTATTCCATGGATGAAGTTGACATGGTGTTTGTTGGTGCTGATGGGGTTGTTGAAAGTGGAGGAATAATCAATATGATGGGCACTTATCAGATAGCTCTCGTCGCTCACAGTATGAACAAACCTGTTTATGTGGCTGCTGAAAGTTACAAGTTTGCACGCCTATATCCGTTGGACCAGAAGGACATGACACCAGCTCACCGACCCATTGATTTTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCCTCCCCAGTATCTTACGCTGCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAGCGATGAGCTTATCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTACCGCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTAT TT GCCCTTTAC GTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTTTGTCTAAAGCATCTATCTGGTGTTAATAGTTTTGGTGTTGGTTGCGAAGATGGTCTGG]
[+] EMBL AU078690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTATGTGGCTGCTGAAAGTTACAAGTTTGCACGCCTATATCCGTTGGACCAGAAGGACATGACACCAGCTCACCGACCCATTGATTTTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCCTCCCNNGTATCTTACGCTNCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAGCGATGAGNTTNTCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTACCGCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTTTGCTAaaaa                                                                                                                                        ]
[+] EMBL D43316               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGACCCATTGATTTTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCCTCCCCAGTATCTTACGCTGCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAGCGATGAGCTTATCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTACCGCCGTGGAATCTAAGGTTTTCCCTGTCAGNTTTTTGCTATGTTGNATNTTGGCCCTTTACGGNGGATGCAATa                                                                                                          ]


>consensus_12008#1 CGACGCCTCCTCCGCCGCCGCCGCCCAAAACCCTAACCCTAACCCTAGCACGGGGCTGCC GCCCATCTCCGCCGTCATCCGCTCCAGCAGGGCCACCACCATGATGGAGCTCGAGATCGA GCTCAAGAAGGCATCCGACAAGCTCAAGTCTTGGGATGCCACTTCCATTTCTTTGTCTGC CGCATGTGATTTGTTCATGCGGTTTGTAACAAGAACATCACATTTGGAGCATGAGAAGTT TGATGCTGCAAAATCACGCCTAATTGAGAGGGGAGAAAAATTTGGAGAGATATCCTTAAA GGCTCGTAAGACAATTGCAATGCTCAGCCAGGATTTTATTTCAGATGGTTGTACTATTCT GGTACATGGTTATTCCAGAGTTGTTTTGGAAGTTCTAAAGCTAGCTGCATCAAACCGCAA ACTCTTCAGGGTACTTTGCACAGAGGGCAGGCCGGACAGAACTGGTTTACGAATGTCAAA TGAACTGGCAGCATTAGGCATTCCTGTTAAGGTGCTAATTGATTCAGCTGTTGCTTATTC CATGGATGAAGTTGACATGGTGTTTGTTGGTGCTGATGGGGTTGTTGAAAGTGGAGGAAT AATCAATATGATGGGCACTTATCAGATAGCTCTCGTCGCTCACAGTATGAACAAACCTGT TTATGTGGCTGCTGAAAGTTACAAGTTTGCACGCCTATATCCGTTGGACCAGAAGGACAT GACACCAGCTCACCGACCCATTGATTTTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGA GACTTCAGCGAGAGACTACACTCCTCCCCAGTATCTTACGCTGCTTCTGACTGATCTCGG TGTTCTGACACCATCTGTTGTGAGCGATGAGCTTATCCAACTATACCTATGATCACTGGT ACGGAGATATGATGTACCGATGTACCGCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTT TGCTATGTTGTATTTGCCCTTTACGTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTA TGCAACAGAAGATAACCCCAGTTTTGTCTAAAGCATCTATCTGGTGTTAATAGTTTTGGT GTTGGTTGCGAAGATGGTCTGG



consensusID : consensus_12008#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 173
fasta sequence
                              [AGAGGACGAGACAAGGGGGATGTACCGATGTACTGCCGTGGAATTTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTATTTGCCCTTTACGTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTTTGTCTAAAAAAAAAAAAAAAA]

[-] EMBL CA760657             [AGAGGACGAGACAAGGGGGATGTACCGATGTACTGCCGTGGAATTTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTATTTGCCCTTTACGTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTTTGTCTAAAAAAAAAAAAAAAA]


>consensus_12008#2 AGAGGACGAGACAAGGGGGATGTACCGATGTACTGCCGTGGAATTTAAGGTTTTCCCTGT CAGTTTTTTGCTATGTTGTATTTGCCCTTTACGTGGATGCAATGTTTGGAGGATTCACAA AAGGGTTATGCAACAGAAGATAACCCCAGTTTTGTCTAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12008#0      CTCTCTCCTCTCCTCTCCTACCATGGAGCCCGACGCCTCCTCCGCCGCCGCCGCCCAAAA 60
consensus_12008#1      ------------------------------------------------------------
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      CCCTAACCCTAACCCTAGCACGGGGCTGCCGCCCATCTCCGCCTACTACCAGACGCGCGC 120
consensus_12008#1      ------------------------------------------------------------
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      GGAGNACCACGCCGTCGTCTCCAGCGACTGGCTCGCGCACGCCGCCGCCGCGGCCTCGCT 180
consensus_12008#1      ------------------------------------------------------------
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      CCCTCCCTCCTCCGATGCCGCCGACGCGGACGCCGCCTCCGACGCCGCGGCGCTGCTCTC 240
consensus_12008#1      ------------------------------------------------------------
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      CCCCGGGAGCAACGGCGGCGGCGGCGGGGTGATCGAGGAGT--TCAACTTCTGGCGCCGC 298
consensus_12008#1      ---------------------------------CGACGCCTCCTCCGCCGCCGCCGCCCA 27
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      AAGCCCGAGGCCGCGGAGGCCGTGGCGGCCATCATGGCGCTCGCCGCCGTCATCCGCTCC 358
consensus_12008#1      AAACCCTAACCCT--AACCCTAGCACGGGGCTGCCGCCCATCTCCGCCGTCATCCGCTCC 85
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      AGCAGGGCCACCACCATGATGGAGCTCGAGATCGAGCTCAAGAAGGCATCCGACAAGCTC 418
consensus_12008#1      AGCAGGGCCACCACCATGATGGAGCTCGAGATCGAGCTCAAGAAGGCATCCGACAAGCTC 145
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      AAGTCTTGGGATGCCACTTCCATTTCTTTGTCTGCCGCATGTGATTTGTTCATGCGGTTT 478
consensus_12008#1      AAGTCTTGGGATGCCACTTCCATTTCTTTGTCTGCCGCATGTGATTTGTTCATGCGGTTT 205
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      GTAACAAGAACATCACATTTGGAGCATGAGAAGTTTGATGCTGCAAAATCACGCCTAATT 538
consensus_12008#1      GTAACAAGAACATCACATTTGGAGCATGAGAAGTTTGATGCTGCAAAATCACGCCTAATT 265
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      GAGAGGGGAGAAAAATTTGGAGAGATATCCTTAAAGGCTCGTAAGACAATTGCAATGCTC 598
consensus_12008#1      GAGAGGGGAGAAAAATTTGGAGAGATATCCTTAAAGGCTCGTAAGACAATTGCAATGCTC 325
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      AGCCAGGATTTTATTTCAGATGGTTGTACTATTCTGGTACATGGTTATTCCAGAGTTGTT 658
consensus_12008#1      AGCCAGGATTTTATTTCAGATGGTTGTACTATTCTGGTACATGGTTATTCCAGAGTTGTT 385
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      TTGGAAGTTCTAAAGCTAGCTGCATCAAAACCGCAAACTCTTCAGGGTACTTTGCACAGA 718
consensus_12008#1      TTGGAAGTTCTAAAGCTAGCTGCATCAAA-CCGCAAACTCTTCAGGGTACTTTGCACAGA 444
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      GGGCAGGCCGGACAGAACTGGTTTACGAATGTCAAATGAACTGGCAGCATTAGGCATTCC 778
consensus_12008#1      GGGCAGGCCGGACAGAACTGGTTTACGAATGTCAAATGAACTGGCAGCATTAGGCATTCC 504
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      TGTTAAGGTGCTAATTGATTCAGCTGTTGCTTATTCCATGGATGAAGTTGACATGGTGTT 838
consensus_12008#1      TGTTAAGGTGCTAATTGATTCAGCTGTTGCTTATTCCATGGATGAAGTTGACATGGTGTT 564
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      TGTTGGTGCTGATGGGGTTGTTGAAAGTGGAGGAATAATCAATATGATGGGCACTTATCA 898
consensus_12008#1      TGTTGGTGCTGATGGGGTTGTTGAAAGTGGAGGAATAATCAATATGATGGGCACTTATCA 624
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      GATAGCTCTCGTCGCTCACAGTATGAACAAACCTGTTTATGTGGCTGCTGAAAGTTACAA 958
consensus_12008#1      GATAGCTCTCGTCGCTCACAGTATGAACAAACCTGTTTATGTGGCTGCTGAAAGTTACAA 684
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      GTTTGCACGCCTATATCCGTTGGACCAGAAGGACATGACACCAGCTCACCGACCCATTGA 1018
consensus_12008#1      GTTTGCACGCCTATATCCGTTGGACCAGAAGGACATGACACCAGCTCACCGACCCATTGA 744
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      TTTTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCC 1078
consensus_12008#1      TTTTGGAGTTCCAATTCCGGCTGGTGTGGAGGTTGAGACTTCAGCGAGAGACTACACTCC 804
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      TCCCCAGTATCTTACGCTGCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAG 1138
consensus_12008#1      TCCCCAGTATCTTACGCTGCTTCTGACTGATCTCGGTGTTCTGACACCATCTGTTGTGAG 864
consensus_12008#2      ------------------------------------------------------------
                                                                                   

consensus_12008#0      CGATGAGCTTATCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTA 1198
consensus_12008#1      CGATGAGCTTATCCAACTATACCTATGATCACTGGTACGGAGATATGATGTACCGATGTA 924
consensus_12008#2      -------------------------AGAGGACGAGACAAGGGG---GATGTACCGATGTA 32
                                                 **  **  *    * *    **************

consensus_12008#0      CCGCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTATTTGCCCTTTAC 1258
consensus_12008#1      CCGCCGTGGAATCTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTATTTGCCCTTTAC 984
consensus_12008#2      CTGCCGTGGAATTTAAGGTTTTCCCTGTCAGTTTTTTGCTATGTTGTATTTGCCCTTTAC 92
                       * ********** ***********************************************

consensus_12008#0      GTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTT 1318
consensus_12008#1      GTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTT 1044
consensus_12008#2      GTGGATGCAATGTTTGGAGGATTCACAAAAGGGTTATGCAACAGAAGATAACCCCAGTTT 152
                       ************************************************************

consensus_12008#0      TGTCTAAAGCATCTATCTGGTGTTAATAGTTTTGGTGTTGGTTGCGAAGATGGTCTGGAT 1378
consensus_12008#1      TGTCTAAAGCATCTATCTGGTGTTAATAGTTTTGGTGTTGGTTGCGAAGATGGTCTGG-- 1102
consensus_12008#2      TGTCTAAAAAAAAAAAAAAAA--------------------------------------- 173
                       ********  *   *                                             

consensus_12008#0      TGCATTTTGCAAAAAAAAAAAAA 1401
consensus_12008#1      -----------------------
consensus_12008#2      -----------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)