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Oryza sativa
cluster # 12014 cluster # 12014       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12014#0 length = 2464 sequences # 7  
consensus_12014#1 length = 691 sequences # 1  
consensus_12014#2 length = 352 sequences # 1  

consensusID : consensus_12014#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2464
fasta sequence
                              [AGTGGGAGGCATACGTCCTCGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCG-TTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGTGGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGATGGTTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTGTGTCCGAATTCATTGGTTGCTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGAACATTGATACAACAGCAGAGGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGCAACTGCGGCATGAGAAGCATTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCAAGAGCTATATTCATGATTTGGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGGGTATTGGACTAGGATTTGGATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTACTGTGGATTCTATCGTTACTGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACTACGATGGAACGCTAGTACCACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTAAAATCATGAATGCTCTTTGTGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAGGAAGGGATAGCCTTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAG-GTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGCAGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATAGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCTTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGGAAATTTGGTGAGCAATTTTGTATTAGATCCTTTTAAGTTTAAAGCGATAAAACACTATTGCCATTTAAACTAGAG]

[+] EMBL AK101207             [AGTGGGAGGCATACGTCCTCGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCG TTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGTGGGGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGATGGTTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTGTGTCCGAATTCATTGGTTGCTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGAACATTGATACAACAGCAGAGGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGCAACTGCGGCATGAGAAGCATTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCAAGAGCTATATTCATGATTTGGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGGGTATTGGACTAGGATTTGGATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTACTGTGGATTCTATCGTTACTGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACTACGATGGAACGCTAGTACCACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTAAAATCATGAATGCTCTTTGTGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAGGAAGGGATAGCCTTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAG GTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGCAGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATAGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCTTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGG                                                                           ]
[+] EMBL AK109542             [AGTGGGAGGCATACGTCCTCGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCG TTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGTGGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK105417             [                            GCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCG TTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAAAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGTGGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGATGGTTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTGTGTCCGAATTCATTGGTTGCTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGAACATTGATACAACAGCAGAGGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGCAACTGCGGCATGAGAAGCATTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCAAGAGCTATATTCATGATTTGGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGGGTATTGGACTAGGATTTGGATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTACTGTGGATTCTATCGTTACTGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACTACGATGGAACGCTAGTACCACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTAAAATCATGAATGCTCTTTGTGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAGGAAGGGATAGCCTTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAG GTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGCAGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATAGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCTTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGGAAATTTGGTGAGCAATTTTGTATTAGATCCTTTTAAGTTTAAAGCGATAAAACACTATTGCCATTTAAACTAGAG]
[+] EMBL OSS1776A             [                                                                                                                                                                                                    CCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCG CGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCGTTTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGC CAAGGCAGTTTTGGTGCAGATT CAAA CCAA GGGTGGTTGTTGGGAGGACNTT  AGNG TACA GCTNAGA TNATGA NGTT CAGGNGG T AATG ACA  TTTCA GGCnggt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BP184693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAGAGTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AA749719             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCA GGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAATAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB638778             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGCAGTCTTCTTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATAGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCTTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGAAAAT                                                                       ]


>consensus_12014#0 AGTGGGAGGCATACGTCCTCGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCA ACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCC TTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGT CGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCG ATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGA TGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCA CTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCC GGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTG TCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCGT TTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTG CAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGA GTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCA ATAGAGCCCTTTCAAGTGTGGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTG TAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGG GATTTCCAGATTTGGATGGTTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTG TGTCCGAATTCATTGGTTGCTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGA ACATTGATACAACAGCAGAGGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGC AACTGCGGCATGAGAAGCATTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCA AGAGCTATATTCATGATTTGGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGG GTATTGGACTAGGATTTGGATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTA CTGTGGATTCTATCGTTACTGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACT ACGATGGAACGCTAGTACCACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTA AAATCATGAATGCTCTTTGTGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAG GAAGGGATAGCCTTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAAC ATGGCTACTTTATGAGGTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAG AATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATG GATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTG GTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATG AGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCA AAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATT TTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATA TCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGA AGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGG CGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTA TCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAA TTGCCACCAGCAGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAA CTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCT GCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATA GAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCT TGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGGAAATTTGGTGA GCAATTTTGTATTAGATCCTTTTAAGTTTAAAGCGATAAAACACTATTGCCATTTAAACT AGAG



consensusID : consensus_12014#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence
                              [ACAGAAGCAACCGATGGNTCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTNGATCATTTGGAAAGTGTTCTTGCTNATGAGCCTGTCTGTGTAAAGNGTGGCCAACAGATTGTGGAAGTGAAACCGCNGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGNATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGNNGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGNAGTGCAACTTTAGTNATACTCAGTTAGANAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCAAAAAAAAAAAA]

[+] EMBL AU101936             [ACAGAAGCAACCGATGGNTCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTNGATCATTTGGAAAGTGTTCTTGCTNATGAGCCTGTCTGTGTAAAGNGTGGCCAACAGATTGTGGAAGTGAAACCGCNGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGNATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGNNGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGNAGTGCAACTTTAGTNATACTCAGTTAGANAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCAAAAAAAAAAAA]


>consensus_12014#1 ACAGAAGCAACCGATGGNTCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCAC CAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTNGATCATTTGGAA AGTGTTCTTGCTNATGAGCCTGTCTGTGTAAAGNGTGGCCAACAGATTGTGGAAGTGAAA CCGCNGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAAC AAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTT GAAGGAATTGCTGATATCATGAGAAGGAGNATAGTTGATCCCCAAACATCATTATATGCG TGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTT TTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCA GAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGT GATGTCAATGCGTCAATTGCCACCAGNNGTCTTCCTGACTAAAATTGAAGCTGATTGCCA TCAGCAGGNAGTGCAACTTTAGTNATACTCAGTTAGANAAATCAATGTCAATAATCTTAG CGCTGCTCGATTTTCTGCCAAAAAAAAAAAA



consensusID : consensus_12014#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 352
fasta sequence
                              [CACACGCACATTTTGTTCTCTGCATACGCGATGATACATCACACCACGATATGTTTGAACGAATTGCTGATATCATCACAAGGAGCATACTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCACATGCATCACAGGACACTGATTCACACGAACATCCACGACAGATAACATCTATCCCCGACCCCCGGATACGCGTCATCATGTTTTAAGTCTCCTGCTGATGTTCATGCGTCGATTGCCACCAGCAGTCTTCCTGACTTAGATTGANCTGNTT]

[+] EMBL AA754066             [CACACGCACATTTTGTTCTCTGCATACGCGATGATACATCACACCACGATATGTTTGAACGAATTGCTGATATCATCACAAGGAGCATACTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCACATGCATCACAGGACACTGATTCACACGAACATCCACGACAGATAACATCTATCCCCGACCCCCGGATACGCGTCATCATGTTTTAAGTCTCCTGCTGATGTTCATGCGTCGATTGCCACCAGCAGTCTTCCTGACTTAGATTGANCTGNTT]


>consensus_12014#2 CACACGCACATTTTGTTCTCTGCATACGCGATGATACATCACACCACGATATGTTTGAAC GAATTGCTGATATCATCACAAGGAGCATACTTGATCCCCAAACATCATTATATGCGTGCA CAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGA ACATGCTTGAGGCGCTTGCACATGCATCACAGGACACTGATTCACACGAACATCCACGAC AGATAACATCTATCCCCGACCCCCGGATACGCGTCATCATGTTTTAAGTCTCCTGCTGAT GTTCATGCGTCGATTGCCACCAGCAGTCTTCCTGACTTAGATTGANCTGNTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12014#0      AGTGGGAGGCATACGTCCTCGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCA 60
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      ACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCC 120
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      TTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGT 180
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      CGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCG 240
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      ATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGA 300
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      TGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCA 360
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      CTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCC 420
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      GGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTG 480
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      TCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCGT 540
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      TTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTG 600
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      CAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGA 660
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      GTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCA 720
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      ATAGAGCCCTTTCAAGTGTGGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTG 780
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      TAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGG 840
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      GATTTCCAGATTTGGATGGTTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTG 900
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      TGTCCGAATTCATTGGTTGCTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGA 960
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      ACATTGATACAACAGCAGAGGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGC 1020
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      AACTGCGGCATGAGAAGCATTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCA 1080
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      AGAGCTATATTCATGATTTGGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGG 1140
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      GTATTGGACTAGGATTTGGATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTA 1200
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      CTGTGGATTCTATCGTTACTGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACT 1260
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      ACGATGGAACGCTAGTACCACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTA 1320
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      AAATCATGAATGCTCTTTGTGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAG 1380
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      GAAGGGATAGCCTTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAAC 1440
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      ATGGCTACTTTATGAGGTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAG 1500
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      AATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATG 1560
consensus_12014#1      --------------------------------------------ACAGAAGCAACCGATG 16
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      GATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTG 1620
consensus_12014#1      GNTCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTG 76
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      GTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATG 1680
consensus_12014#1      GTTTTGGATCTTCACAAGCTAAAGAGATGCTNGATCATTTGGAAAGTGTTCTTGCTNATG 136
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      AGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCA 1740
consensus_12014#1      AGCCTGTCTGTGTAAAGNGTGGCCAACAGATTGTGGAAGTGAAACCGCNGGGTGTCAGCA 196
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      AAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATT 1800
consensus_12014#1      AAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATT 256
consensus_12014#2      ------------------------------------------------CACACGCACATT 12
                                                                        *** *** ***

consensus_12014#0      TTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATA 1860
consensus_12014#1      TTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATA 316
consensus_12014#2      TTGTTCTCTGCATACGCGATGATACATCACACCACGATATGTTTGAACGAATTGCTGATA 72
                       ************** ********* **** ** * ************ ************

consensus_12014#0      TCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGA 1920
consensus_12014#1      TCATGAGAAGGAGNATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGA 376
consensus_12014#2      TCATCACAAGGAGCATACTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGA 132
                       **** * ****** *** ******************************************

consensus_12014#0      AGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGG 1980
consensus_12014#1      AGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGG 436
consensus_12014#2      AGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGG 192
                       ************************************************************

consensus_12014#0      CGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTA 2040
consensus_12014#1      CGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTA 496
consensus_12014#2      CGCTTGCACATGCATCACAGGACACTGATTCACACGAACATCCACGACAGATAACATCTA 252
                       ******** ******** **** *********** *** ** **  * ************

consensus_12014#0      TCCCGGACCCG-GAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCA 2099
consensus_12014#1      TCCCGGACCCG-GAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCA 555
consensus_12014#2      TCCCCGACCCCCGGATACGCGTCATCATGTTTTAAGTCTCCTGCTGATGTTCATGCGTCG 312
                       **** *****  * *** **** ** ********* ******* ******  ******* 

consensus_12014#0      ATTGCCACCAGCAGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCA 2159
consensus_12014#1      ATTGCCACCAGNNGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGNAGTGCA 615
consensus_12014#2      ATTGCCACCAGCAGTCTTCCTGACTTAGATTGAN-CTGNTT------------------- 352
                       ***********  ************ * *****  *** **                   

consensus_12014#0      ACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTC 2219
consensus_12014#1      ACTTTAGTNATACTCAGTTAGANAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTC 675
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      TGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGAT 2279
consensus_12014#1      TGCCAAAAAAAAAAAA-------------------------------------------- 691
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      AGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGC 2339
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      TTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGGAAATTTGGTG 2399
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      AGCAATTTTGTATTAGATCCTTTTAAGTTTAAAGCGATAAAACACTATTGCCATTTAAAC 2459
consensus_12014#1      ------------------------------------------------------------
consensus_12014#2      ------------------------------------------------------------
                                                                                   

consensus_12014#0      TAGAG 2464
consensus_12014#1      -----
consensus_12014#2      -----
                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)