These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12014#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2464 fasta sequence [AGTGGGAGGCATACGTCCTCGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCG-TTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGTGGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGATGGTTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTGTGTCCGAATTCATTGGTTGCTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGAACATTGATACAACAGCAGAGGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGCAACTGCGGCATGAGAAGCATTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCAAGAGCTATATTCATGATTTGGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGGGTATTGGACTAGGATTTGGATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTACTGTGGATTCTATCGTTACTGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACTACGATGGAACGCTAGTACCACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTAAAATCATGAATGCTCTTTGTGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAGGAAGGGATAGCCTTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAG-GTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGCAGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATAGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCTTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGGAAATTTGGTGAGCAATTTTGTATTAGATCCTTTTAAGTTTAAAGCGATAAAACACTATTGCCATTTAAACTAGAG] [+] EMBL AK101207 [AGTGGGAGGCATACGTCCTCGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCG TTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGTGGGGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGATGGTTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTGTGTCCGAATTCATTGGTTGCTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGAACATTGATACAACAGCAGAGGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGCAACTGCGGCATGAGAAGCATTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCAAGAGCTATATTCATGATTTGGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGGGTATTGGACTAGGATTTGGATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTACTGTGGATTCTATCGTTACTGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACTACGATGGAACGCTAGTACCACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTAAAATCATGAATGCTCTTTGTGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAGGAAGGGATAGCCTTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAG GTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGCAGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATAGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCTTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGG ] [+] EMBL AK109542 [AGTGGGAGGCATACGTCCTCGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCG TTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGTGGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGAT ] [+] EMBL AK105417 [ GCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCG TTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAAAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGTGGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGATGGTTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTGTGTCCGAATTCATTGGTTGCTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGAACATTGATACAACAGCAGAGGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGCAACTGCGGCATGAGAAGCATTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCAAGAGCTATATTCATGATTTGGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGGGTATTGGACTAGGATTTGGATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTACTGTGGATTCTATCGTTACTGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACTACGATGGAACGCTAGTACCACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTAAAATCATGAATGCTCTTTGTGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAGGAAGGGATAGCCTTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAG GTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGCAGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATAGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCTTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGGAAATTTGGTGAGCAATTTTGTATTAGATCCTTTTAAGTTTAAAGCGATAAAACACTATTGCCATTTAAACTAGAG] [+] EMBL OSS1776A [ CCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGGCGTGTCG CGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCGTTTTGAGCAGATGCTGAGGACACACCCAAAATGGCAGC CAAGGCAGTTTTGGTGCAGATT CAAA CCAA GGGTGGTTGTTGGGAGGACNTT AGNG TACA GCTNAGA TNATGA NGTT CAGGNGG T AATG ACA TTTCA GGCnggt ] [+] EMBL BP184693 [ TTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAGAGTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGC ] [+] EMBL AA749719 [ TGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCA GGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAATAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCAC ] [-] EMBL CB638778 [ GCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGCAGTCTTCTTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATAGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCTTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGAAAAT ] consensusID : consensus_12014#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence [ACAGAAGCAACCGATGGNTCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTNGATCATTTGGAAAGTGTTCTTGCTNATGAGCCTGTCTGTGTAAAGNGTGGCCAACAGATTGTGGAAGTGAAACCGCNGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGNATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGNNGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGNAGTGCAACTTTAGTNATACTCAGTTAGANAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCAAAAAAAAAAAA] [+] EMBL AU101936 [ACAGAAGCAACCGATGGNTCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCTAAAGAGATGCTNGATCATTTGGAAAGTGTTCTTGCTNATGAGCCTGTCTGTGTAAAGNGTGGCCAACAGATTGTGGAAGTGAAACCGCNGGGTGTCAGCAAAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGNATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGNNGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGNAGTGCAACTTTAGTNATACTCAGTTAGANAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCAAAAAAAAAAAA] consensusID : consensus_12014#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence [CACACGCACATTTTGTTCTCTGCATACGCGATGATACATCACACCACGATATGTTTGAACGAATTGCTGATATCATCACAAGGAGCATACTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCACATGCATCACAGGACACTGATTCACACGAACATCCACGACAGATAACATCTATCCCCGACCCCCGGATACGCGTCATCATGTTTTAAGTCTCCTGCTGATGTTCATGCGTCGATTGCCACCAGCAGTCTTCCTGACTTAGATTGANCTGNTT] [+] EMBL AA754066 [CACACGCACATTTTGTTCTCTGCATACGCGATGATACATCACACCACGATATGTTTGAACGAATTGCTGATATCATCACAAGGAGCATACTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCACATGCATCACAGGACACTGATTCACACGAACATCCACGACAGATAACATCTATCCCCGACCCCCGGATACGCGTCATCATGTTTTAAGTCTCCTGCTGATGTTCATGCGTCGATTGCCACCAGCAGTCTTCCTGACTTAGATTGANCTGNTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12014#0 AGTGGGAGGCATACGTCCTCGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCA 60 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 ACCCCGAGGATGACTACATCTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCC 120 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 TTCGCCGTCGGTTCAACAGGCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGT 180 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 CGGAACTCTACCGTTCCCTCCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCG 240 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 ATCTGATTGGGTTCCACACCTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGA 300 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 TGCTGGGGATCGAGTACCAGTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCA 360 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 CTGTTGGGATAAAGATCATGCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCC 420 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 GGCTGCCTGATCTTGAGTGGCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTG 480 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 TCATGCTCGGTGTGGATGATATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCGT 540 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 TTGAGCAGATGCTGAGGACACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTG 600 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 CAAACCCAAGGGGTGGTGGTGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGA 660 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 GTTGCAGGAGGATAAATGCACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCA 720 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 ATAGAGCCCTTTCAAGTGTGGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTG 780 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 TAACTGCAGTGAGGGATGGGATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGG 840 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 GATTTCCAGATTTGGATGGTTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTG 900 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 TGTCCGAATTCATTGGTTGCTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGA 960 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 ACATTGATACAACAGCAGAGGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGC 1020 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 AACTGCGGCATGAGAAGCATTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCA 1080 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 AGAGCTATATTCATGATTTGGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGG 1140 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 GTATTGGACTAGGATTTGGATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTA 1200 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 CTGTGGATTCTATCGTTACTGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACT 1260 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 ACGATGGAACGCTAGTACCACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTA 1320 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 AAATCATGAATGCTCTTTGTGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAG 1380 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 GAAGGGATAGCCTTGAGAAATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAAC 1440 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 ATGGCTACTTTATGAGGTGGACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAG 1500 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 AATTTGGATGGATGCAGATGGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATG 1560 consensus_12014#1 --------------------------------------------ACAGAAGCAACCGATG 16 consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 GATCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTG 1620 consensus_12014#1 GNTCATATATTGAAACCAAAGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTG 76 consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 GTTTTGGATCTTCACAAGCTAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATG 1680 consensus_12014#1 GTTTTGGATCTTCACAAGCTAAAGAGATGCTNGATCATTTGGAAAGTGTTCTTGCTNATG 136 consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 AGCCTGTCTGTGTAAAGAGTGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCA 1740 consensus_12014#1 AGCCTGTCTGTGTAAAGNGTGGCCAACAGATTGTGGAAGTGAAACCGCNGGGTGTCAGCA 196 consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 AAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATT 1800 consensus_12014#1 AAGGATTTGTTGCTGAGAAGATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATT 256 consensus_12014#2 ------------------------------------------------CACACGCACATT 12 *** *** *** consensus_12014#0 TTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATA 1860 consensus_12014#1 TTGTTCTCTGCATAGGCGATGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATA 316 consensus_12014#2 TTGTTCTCTGCATACGCGATGATACATCACACCACGATATGTTTGAACGAATTGCTGATA 72 ************** ********* **** ** * ************ ************ consensus_12014#0 TCATGAGAAGGAGCATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGA 1920 consensus_12014#1 TCATGAGAAGGAGNATAGTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGA 376 consensus_12014#2 TCATCACAAGGAGCATACTTGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGA 132 **** * ****** *** ****************************************** consensus_12014#0 AGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGG 1980 consensus_12014#1 AGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGG 436 consensus_12014#2 AGCCAAGCAAGGCTAAGTACTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGG 192 ************************************************************ consensus_12014#0 CGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTA 2040 consensus_12014#1 CGCTTGCAGATGCATCAGAGGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTA 496 consensus_12014#2 CGCTTGCACATGCATCACAGGACACTGATTCACACGAACATCCACGACAGATAACATCTA 252 ******** ******** **** *********** *** ** ** * ************ consensus_12014#0 TCCCGGACCCG-GAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCA 2099 consensus_12014#1 TCCCGGACCCG-GAATAGGCGTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCA 555 consensus_12014#2 TCCCCGACCCCCGGATACGCGTCATCATGTTTTAAGTCTCCTGCTGATGTTCATGCGTCG 312 **** ***** * *** **** ** ********* ******* ****** ******* consensus_12014#0 ATTGCCACCAGCAGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCA 2159 consensus_12014#1 ATTGCCACCAGNNGTCTTCCTGACTAAAATTGAAGCTGATTGCCATCAGCAGGNAGTGCA 615 consensus_12014#2 ATTGCCACCAGCAGTCTTCCTGACTTAGATTGAN-CTGNTT------------------- 352 *********** ************ * ***** *** ** consensus_12014#0 ACTTTAGTAATACTCAGTTAGACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTC 2219 consensus_12014#1 ACTTTAGTNATACTCAGTTAGANAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTC 675 consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 TGCCATTTTTCTGATTTCTCTTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGAT 2279 consensus_12014#1 TGCCAAAAAAAAAAAA-------------------------------------------- 691 consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 AGAAAGGAGCCTGGGGGGAAAGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGC 2339 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 TTGTTAGGTACAGTATGGAAGATTGGAGTATTTGCGGGAGTACAAGTCGGAAATTTGGTG 2399 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 AGCAATTTTGTATTAGATCCTTTTAAGTTTAAAGCGATAAAACACTATTGCCATTTAAAC 2459 consensus_12014#1 ------------------------------------------------------------ consensus_12014#2 ------------------------------------------------------------ consensus_12014#0 TAGAG 2464 consensus_12014#1 ----- consensus_12014#2 ----- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||