cluster # 12015

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Oryza sativa
cluster # 12015 cluster # 12015 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12015#0 length = 1473 sequences # 9
consensusID : consensus_12015#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1473
fasta sequence
                              [CGGCCACTGCTACGGCCCACTCGACCCCGTCTCCAACATCATCCTCAACACCATCTGGTACGACGCCGCGTTCCCGGTCCCCAAGGAGCAGCACCTAGACTTGGACATGATTGGCAGGTGGGCGCTGGTCCGTGCTGAGCGCTATTCCGTTGCTGGCCTCGTCGCTGGCCTCATTGCCTTTGCCGGGGACTACAACCTCTCTGAACTCCAAGCCATCAGGTGCCTCCTCTACGCCAACGGGGACTTTGCCACTGCCATGAGCGTACTGCAGCAAGCACTCCTGAACCAAGAACGTACAATGCTGTCTGACTCCGAGCTGTGCCGCTTCATGGATGTTATGGCTAAGCGCTTGCAGCTGTACAGCGTGATGGCCATTGCTGCTCAGCACCCGAGCGCTGATGGACTACAAGAGTTCCTCATATCTGAGCGCACTCGTGCTATGCTGCCGATGGAGTATCGCAGATTCTCCCGAGAGGATGTGCATTCCGTCATCGAGTCACTGTTACATGAACCACCACCGTCACTTGGGATGCCACCGGAGCTGGTACGTTTGAGCCTGGCGGCAGAACGGACCATTGACCAGTTCCCTGATGCTACCAAGCGCTTCTGGGCTGACATGAGCTCTTTCCACAGCAAGGCGAAGGCCGCATTGGAAAGCTATGTTCTGGAGAACGGGGGCCCTCAGTATGTGATCCATGTCATCTGTGGTGCGAACGAAAGTGTCGCGGACCGCAATGGCCCAGAGCTTAG-CAGGATTAACTGGCCAAGATCGCACAACAAATTTCACTA-TTCCCACA-TTAACTTCTTGGCGAGCCCTACTGGGCCAAGTGCTGTGGGTGTGTTGCCAACCCTTTTCTTTGCAGAGTGCGTAAATCACAATGAAGAAAGCGACCGTGCCAGGAAGAACA-ATTGCTACCCTGTTGTC-GTGCCA-CCAACAAATGCTGAGAAGGTCCGGTGCTTCTACTG-TGAGTATAAAGGCATTAATATCATTCACCCGGCTGATGGGAACTACCA-TGGGTGCGACACAGACTTCGAGAAGATGGCACGCCGGAAGCACGTTTTGACCAATAGCATCGAGAGCGTCTTCAACA-ATGGCCTCTTGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTTCTACTTTGACCATGCCAGGGACCATGCCAAGGGGCCATCATCTTGTTCAGATGGTTAAAAATTCATCACAACATCAGACGTGGTCGCGTCCTAGTTGCTAGTTTAATCTGTTTGTTGTTTATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCAAATTAGCAGGCAGCGACTAAT-TAACTTTGACTCTTATTTATGGTCA-C-TGGTGTAGGTCTGATGGCAGCATTTTAAGTTTGTGTTGATACTGAAATATTGGATGTGTTTTTCTAAAAGTCGCATGCTGGCTACTCTGAAAAAAAAAATGTTTCTATTTTTCTGTTTAAAAAAAAAAA]

[+] EMBL AK100083             [CGGCCACTGCTACGGCCCACTCGACCCCGTCTCCAACATCATCCTCAACACCATCTGGTACGACGCCGCGTTCCCGGTCCCCAAGGAGCAGCACCTAGACTTGGACATGATTGGCAGGTGGGCGCTGGTCCGTGCTGAGCGCTATTCCGTTGCTGGCCTCGTCGCTGGCCTCATTGCCTTTGCCGGGGACTACAACCTCTCTGAACTCCAAGCCATCAGGTGCCTCCTCTACGCCAACGGGGACTTTGCCACTGCCATGAGCGTACTGCAGCAAGCACTCCTGAACCAAGAACGTACAATGCTGTCTGACTCCGAGCTGTGCCGCTTCATGGATGTTATGGCTAAGCGCTTGCAGCTGTACAGCGTGATGGCCATTGCTGCTCAGCACCCGAGCGCTGATGGACTACAAGAGTTCCTCATATCTGAGCGCACTCGTGCTATGCTGCCGATGGAGTATCGCAGATTCTCCCGAGAGGATGTGCATTCCGTCATCGAGTCACTGTTACATGAACCACCACCGTCACTTGGGATGCCACCGGAGCTGGTACGTTTGAGCCTGGCGGCAGAACGGACCATTGACCAGTTCCCTGATGCTACCAAGCGCTTCTGGGCTGACATGAGCTCTTTCCACAGCAAGGCGAAGGCCGCATTGGAAAGCTATGTTCTGGAGAACGGGGGCCCTCAGTATGTGATCCATGTCATCTGTGGTGCGAACGAAAGTGTCGCGGACCGCAATGGTCCAGAGCTTAG CAGGATTAACTGGCCAAGATCGCACAACAAATTTCACTA TTCCCACA TTAACTTCTTGGCGAGCCCTACTGGGCCAAGTGCTGTGGGTGTGTTGCCAACCCTTTTCTTTGCAGAGTGCGTAAATCACAATGAAGAAAGCGACCGTGCCAGGAAGAACA ATTGCTACCCTGTTGTC GTGCCA CCAACAAATGCTGAGAAGGTCCGGTGCTTCTACTG TGAGTATAAAGGCATTAATATCATTCACCCGGCTGATGGGAACTACCA TGGGTGCGACACAGACTTCGAGAAGATGGCACGCCGGAAGCACGTTTTGACCAATAGCATCGAGAGCGTCTTCAACA ATGGCCTCTTGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTTCTACTTTGACCATGCCAGGGACCATGCCAAGGGGCCATCATCTTGTTCAGATGGTTAAAAATTCATCACAACATCAGACGTGGTCGCGTCCTAGTTGCTAGTTTAATCTGTTTGTTGTTTATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCAAATTAGCAGGCAGCGACTAAT TAACTTTGACTCTTATTTATGGTCA C TGGTGTAGGTCTGATGGCAGCATTTTAAGTTTGTGTTGATACTGAAATATTGGATGTGTTTTTC                                                                 ]
[+] EMBL CB658880             [                                                                                    GGAGCAGCACCTAGACTTGGACATGATTGGCAGGTGGGCGCTGGTCCGTGCTGAGCGCTATTCCGTTGCTGGCCTCGTCGCTGGCCTCATTGCCTTTGCCGGGGACTACAACCTCTCTGAACTCCAAGCCATCAGGTGCCTCCTCTACGCCAACGGGGACTTTGCCACTGCCATGAGCGTACTGCAGCAAGCACTCCTGAACCAAGAACGTACAATGCTGTCTGACTCCGAGCTGTGCCGCTTCATGGATGTTATGGCTAAGCGCTTGCAGCTGTACAGCGTGATGGCCATTGCTGCTCAGCACCCGAGCGCTGATGGACTACAAGAGTTCCTCATATCTGAGCGCACTCGTGCTATGCTGCCGATGGAGTATCGCAGATTCTCCCGAGAGGATGTGCATTCCGTCATCGAGTCACTGTTACATGAACCACCACCGTCACTTGGGATGCCACCGGAGCTGGTACGTTTGAGCCTGGCGGCAGAACGGACCATTGACCAGTTCCCTGATGCTACCAAGCGCTTCTGGGCTGACATGAGCTCTTTCCACAGCAAGGCGAAGGCCGCATTGGAAAGCTATGTTCTGGAGAACGGGGGCCCTCAGTATGTGATCCATGTCATCTGTGGTGCGAACGAAAGTGTCGCGGACCGCAATGGCCCAGAGCTTAG CAGGATTAACTGGCCAAGATCGCACAACAAATTTCACTA TTCCCACA TTAACTTCTTGGCGAGCCCTACTGGGCCAAGTGCTGTGGGTGTGTTGCCAACCCTTTTCTTTGCAGAGTGCGTANATCACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB658881             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCTCTTTCCACAGCAAGGCGAAGGCCGCATTGGAAAGCTATGTTCTGGAGAACGGGGGCCCTCAGTATGTGATCCATGTCATCTGTGGTGCGAACGAAAGTGTCGCGGACCGCAATGGCCCAGAGCTTAG CAGGATTAACTGGCCAAGATCGCACAACAAATTTCACTA TTCCCACA TTAACTTCTTGGCGAGCCCTACTGGGCCAAGTGCTGTGGGTGTGTTGCCAACCCTTTTCTTTGCAGAGTGCGTAAATCACAATGAAGAAAGCGACCGTGCCAGGAAGAACA ATTGCTACCCTGTTGTC GTGCCA CCAACAAATGCTGAGAAGGTCCGGTGCTTCTACTG TGAGTATAAAGGCATTAATATCATTCACCCGGCTGATGGGAACTACCA TGGGTGCGACACAGACTTCGAGAAGATGGCACGCCGGAAGCACGTTTTGACCAATAGCATCGAGAGCGTCTTCAACA ATGGCCTCTTGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTTCTACTTTGACCATGCCAGGGACCATGCCAAGGGGCCATCATCTTGTTCAGATGGTTAAAAATTCATCACAACATCAGACGTGGTCGCGTCCTAGTTGCTAGTTTAATCTGTTTGTTGTTTATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCAAATTAGCAGGCAGCGACTAAT TAACTTTGACTCTTATTTATGGTCA C TGGTGTAGGTCTGATGGCAGCATTTTAAGTTTGTGTTGATACTGAAATATTGGATG                                                                         ]
[+] EMBL BQ908521             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGAAAGTGTCGCGGACCGCAATGGCCCAGAGCTTAGCCAGGATTAACTGGCCAAGATCGCACAACCAATTTCACTATTTCCCACAGTTAACTTCTTGGCGAGCCCTACTGGGCCAAGTGCTGTGGGTGTGTTGCCAACCCTTTTCTTTGCAGAGTGCGTAAATCACNATGAAGAAAGCGACCGTGCCAGGAAGAACACATTGCTACCCTGTTGTC GTGCCA CCAACAAATGCTGAGAAGGTCCGGTGCTTCTACTG TGAGTATAAAGGCATTAATATCATTCACCCGGCTGATGGGAACTACCA TGGGTGCGACACAGACTTCGAGAAGATGGCACGCCGGAAGCACGTTTTGACCCATAGCATCGAGAGCGTCTTCAACA ATGGCCTCTGGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTTCTACTTTGACCATGCCAGGGACCATGCCAAGGGGCCATCATCTTGTTCAGATGGTTAAAAATTCATCACAACATCAGACGTGGTCGCGTCCTAGTTGCTAGTCTAATCTGTTTGTTGTTTATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCCAATTAGCAGGCAGCGACTAAT TAACTTTGACTCTTATTTATGGTCA C TGGTGTAGGTCTGATGGCAGCATTTTAAGTTTGTGTTGATACTGAAAaaaaaaa                                                                           ]
[-] EMBL CB685251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAGCTTAG CAGGATTAACTGGCCAAGATCGCACAACAAATTTCACTA TTCCCACA TTAACTTCTTGGCGAGCCCTACTGGGCCAAGTGCTGTGGGTGTGTTGCCAACCCTTTTCTTTGCAGAGTGCGTAAATCACAATGAAGAAAGCGACCGTGCCAGGAAGAACA ATTGCTACCCTGTTGTC GTGCCA CCAACAAATGCTGAGAAGGTCCGGTGCTTCTACTG TGAGTATAAAGGCATTAATATCATTCACCCGGCTGATGGGAACTACCA TGGGTGCGACACAGACTTCGAGAAGATGGCACGCCGGAAGCACGTTTTGACCAATAGCATCGAGAGCGTCTTCAACA ATGGCCTCTTGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTTTTACTTTGACCATGCCAGGGACCATGCCAAGGGGCCATCATCTTGTTCAGATGGTTAAAAATTCATCACAACATCAGACGTGGTCGCGTCCTAGTTGCTAGTTTAATCTGTTTGTTGTTTATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCAAATTAGCAGGCAGCGACTAAT TAACTTTGACTCTTATTTATGGTCA C TGGTGTAGGTCTGATGGCAGCATTTTAAGTTTGTGTTGATACTGAAATATTGGATGTGTTTTTCTAAAActttaa                                                      ]
[+] EMBL BM422036             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACA ATTGCTACCCTGTTGTCGGTGCCACCCAACAAATGCTGAGAAGGTCCGGTGCTTCTACTGTTGAGTATAAAGGCATTAATATCATTCACCCGGCTGATGGGAACTACCACTGGGTGCGACACAGACTTCGAGAAGATGGCACGCCGGAAGCACGTTTTGACCCATAGCATCGAGAGCGTCTTCAACANATGGCCTCTGGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTTCTACTTTGACCATGCCAGGGACCATGCCAAGGGGCCATCATCTTGTTCAGATGGTT  AAATTCATCACAACATCAGACGTGGTCGCGTCCTAGTTGCTAGTCTAATCTGTTTGTTGTTTATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCCAATTAGCAGGCAGCGACTAAT TAACTTTGACTCTTATTTATGGTCACC TGGTGTAGGTCTGATGNCANCNTTTTAAGTTTGTGTTGATACTGAAATATTGGATGTGTTTTTCTAAATGTCGCATGCTGGCTACTCTGAAAAAAAAAA                              ]
[+] EMBL BQ907570             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CA ATTGCTACCCTGTTGTC GTGCCA CC ACAAATGCTGAGAAGGTCCGGTGCTTCTACTG TGAGTATAAAGGCATTAATATCATTCACCCGGCTGATGGGAACTACCA TGGGTGCGACACAGACTTCGAGAAGATGGCACGCCGGAAGCACGTTTTGACCAATAGCATCGAGAGCGTCTTCAACA ATGGCCTCTGGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTTCTACTTTGACCATGCCAGGGACCATGCCAAGGGGCCATCATCTTGTTCAGATGGTTAAAAATTCATCACAACATCAGACGTGGTCGCGTCCTAGTTGCTAGTCTAATCTGTTTGTTGTTTATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCAAATTAGCAGGCAGCGACNAATGTAACTTTGACTCTTATTTATGGTCA CNNGGTGTAGGTCTGATGCCAGCATTTTAAGTTTGTGTTGATACGGAAATATGGGATGTGTTTTTCTAAAAaa                                                          ]
[+] EMBL BM038516             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TATAAA GCATTAATATCATTCACCC GCTGATGGGAACTACCA T GGTGCGACACAGACTTCGAGAAGATGGCACGCCGGAAGCACGTTTTGACCCATAGCATCGAGAGCGTCTTCAACA ATGGCCTCTGGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTTCTACTTTGACCATGCCAGGGACCATGCC AGGGGCCATCATCTTGTTCAGATGGTTAAAAATTCATCAC ACATCAGACGTGGTCGCGTCCTAGTTGCTAGTCTAATCTGTTTGTTGTTTATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCCAATTAGCAGGCAGCGACTAAT TAACTTTGACTCTTATTTATGGTCACC TGGTGTAGGTCTGATGGCAGCATTTTAAGTTTGTGTTGATACTGAAATATTGGATGTGTTTTTCTAAATGTCGCATGCTGGCTACTCTGAAATTTCAGCTGTTTCTATTTTTCTGTTTAAAAAAAAAAA]
[+] EMBL CB683030             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTTCCATAAGATGGCACGCCGGAAGCACGTTTTGACCAATAGCATCGAGAGCGTCTTCAACA ATGGCCTCTTGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTTCTACTTTGACCATGCCAGGGACCATGCCAAGGGGCCATCATCTTGTTCAGATGGTTAAAAATTCATCACAACATCAGACGTGGTCGCGTCCTAGTTGCTAGTTTAATCTGTTTGTTGTTTATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCAAATTAGCAGGCAGCGACTAAT TAACTTTGACTCTTATTTATGGTCA C TGGTGTAGGTCTGATGGCAGCATTTTAAGTTTGTGTTGATACTGAAATATTGGAT                                                                          ]




>consensus_12015#0
CGGCCACTGCTACGGCCCACTCGACCCCGTCTCCAACATCATCCTCAACACCATCTGGTA
CGACGCCGCGTTCCCGGTCCCCAAGGAGCAGCACCTAGACTTGGACATGATTGGCAGGTG
GGCGCTGGTCCGTGCTGAGCGCTATTCCGTTGCTGGCCTCGTCGCTGGCCTCATTGCCTT
TGCCGGGGACTACAACCTCTCTGAACTCCAAGCCATCAGGTGCCTCCTCTACGCCAACGG
GGACTTTGCCACTGCCATGAGCGTACTGCAGCAAGCACTCCTGAACCAAGAACGTACAAT
GCTGTCTGACTCCGAGCTGTGCCGCTTCATGGATGTTATGGCTAAGCGCTTGCAGCTGTA
CAGCGTGATGGCCATTGCTGCTCAGCACCCGAGCGCTGATGGACTACAAGAGTTCCTCAT
ATCTGAGCGCACTCGTGCTATGCTGCCGATGGAGTATCGCAGATTCTCCCGAGAGGATGT
GCATTCCGTCATCGAGTCACTGTTACATGAACCACCACCGTCACTTGGGATGCCACCGGA
GCTGGTACGTTTGAGCCTGGCGGCAGAACGGACCATTGACCAGTTCCCTGATGCTACCAA
GCGCTTCTGGGCTGACATGAGCTCTTTCCACAGCAAGGCGAAGGCCGCATTGGAAAGCTA
TGTTCTGGAGAACGGGGGCCCTCAGTATGTGATCCATGTCATCTGTGGTGCGAACGAAAG
TGTCGCGGACCGCAATGGCCCAGAGCTTAGCAGGATTAACTGGCCAAGATCGCACAACAA
ATTTCACTATTCCCACATTAACTTCTTGGCGAGCCCTACTGGGCCAAGTGCTGTGGGTGT
GTTGCCAACCCTTTTCTTTGCAGAGTGCGTAAATCACAATGAAGAAAGCGACCGTGCCAG
GAAGAACAATTGCTACCCTGTTGTCGTGCCACCAACAAATGCTGAGAAGGTCCGGTGCTT
CTACTGTGAGTATAAAGGCATTAATATCATTCACCCGGCTGATGGGAACTACCATGGGTG
CGACACAGACTTCGAGAAGATGGCACGCCGGAAGCACGTTTTGACCAATAGCATCGAGAG
CGTCTTCAACAATGGCCTCTTGGTCTCTAATTTCAGGGGTGCGGTGCAAGAAGATTTCTT
CTACTTTGACCATGCCAGGGACCATGCCAAGGGGCCATCATCTTGTTCAGATGGTTAAAA
ATTCATCACAACATCAGACGTGGTCGCGTCCTAGTTGCTAGTTTAATCTGTTTGTTGTTT
ATGATTAATGATGATGCTTGCGCAACTGAGTAGCCCAAATTAGCAGGCAGCGACTAATTA
ACTTTGACTCTTATTTATGGTCACTGGTGTAGGTCTGATGGCAGCATTTTAAGTTTGTGT
TGATACTGAAATATTGGATGTGTTTTTCTAAAAGTCGCATGCTGGCTACTCTGAAAAAAA
AAATGTTTCTATTTTTCTGTTTAAAAAAAAAAA
clustalw multiple alignements is not computed in this case