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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12032#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2203 fasta sequence
[CGGATGCGCCTCCTCGTCGTCGTCGTCACTCCCTCCTCCACCCCGCCATGCCTTCCCCGACCTGCTACTTGCTCCTCAACCCCACCGCCTCCAGGTCCCACCACCGTCCCCGCCTCCCCCTCCCCGCCGCCGCGCCGCCGCGCAGGCGGGTCCATGTCTCCTGCGACGCGCGGAGGACGGGCGGCGGTGGCGGTGGCGGTGGGGTGAAGCGCGAGGCCATACCTGCTGGAACCGGCAAGGCCAAGAAGCAGGTCGTGTTCTTCGACGCCGCGCCACCGGTCTCGCAGCGGGGCGGCGGCGGCGGCGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGAAGGTGGCGAGGAGGAAGGAGAACGCCGCGTTGGGGTTGGTTAGGAGGTTGACGAAGAGGACGCTGTCGCTGCTCTCCAACCTCCCGCTCGCCATCTCCGAGATGTTCGCCATTGCCGCGCTCATGGCCTTAGGCACGGTGATTGATCAAGGGGAGGCGCCGAGCTACTACTTCGAGAAGTTCCCCGAGGACAACCCGGTGTTCGGGTTCATCACGTGGAGGTGGATCCTCACTCCCGGGTTCGATCACATGTTCTCCTCGCCGGTGTTCCTCGGCCTCCTCGCGCTGCTCGCGGCGTCGCTCATGGCCTGCACTTACACCACTCAAATCCCCATTGTCAAGGTTGCCAGAAGATGGTCGTTCATGCATTCAGCAGGAAGCATCCGGAAGCAAGAATTTGCGGAGTCACTTCCCCGCGCATCCATCCAGGATTTAGGAGTTATATTGATGGGTTATGGATATGAGGTATTCACTAAGGGTCCATCTCTGTATGCTTTCAAAGGACTGGCTGGTCGGTTTGCGCCTATCGGTGTGCACATAGCTATGATTTTCATCATGGCAGGTGCCACGCTTAGCGCAACAGGGAGCTTTAAAGGATCGGTGGATGTACCCCAAGGGTTGAACTTTGTAATCGGAGATGTGATGAAACCTAAAGGAGTTCTCTCTTTTGTGCCTGATGTTTTTAATACTGAAGTCCATGTCAATCGGTTCTACATGGAGTACTATGATAGTGGAGAGGTTTCACAATTCTATAGCGATCTTTCACTTTTCGACCTTGATGGCAAAGAGGTCATGAGGAAGACTATCAAAGTGAACGACCCCTTGAGGTATGGTGGGGTCACAATCTACCAAACCGATTGGGGATTTTCAGCATTGCAAGTAAAGAAAAATGGTGAAGGTCCTTTCAATTTGGCCATGGCCCCCTTGAAATTGAATGGTGATAAGAAGTTATTTGGAACATTGTTGCCACTTGAAAACTCCGGTTCTTCCAATGTCAAAGGAATATCGATGCTTGCTCGAGATCTGCAGTCTATTGTGTTGTATGATCA-AGAGGGTAAGTTTGTGGGGGTTCGTCGGCCAAGCTCAAAACTACCGATTGAAATAGATGGTAACGAAATAGTTATTGAAGATGCCATCGGTAGCACCGGTCTCGATCTTAAGACTGATCCAGGAATTCCTATTGTGTATGCTGGATTTGGTGCACTCATGTTAACGACCTGCATTAGTTATCTTTCACATTCTCAGATATGGGCATTGCAAGACGGAAGTACAGTAGTCATCGGAGGAAAGACAAATCGA-GCCAA--GCTTGAA--TTTTCAG-AAG-AGATGAACAGATTAC-TTGATAAGGTGCCAGAATTGATTAGCGTCAATGAGAAAAAAATCGATAGTAAACAAAGTGCTACTTAAGGAATTT-TTATTTTGAGATTGGGCTGTTCGAAAAAATTTGC-AAATGTTCACTTGTGGTTGAGGCT-GGATTTCACAAATCATCTTCGAGGACATAAAATTATACCGTCTTTTCGGTGGAAGATAGGCTATGATTCAACTGATCCCACTCTGTATACAACCCAAAACGGCACACAGCAATATTTTGTTTATCAGACGGTCATGATACAATATACCGAGAAGAAACTGAACTGACAATGTAACTACATAACAAATTTACAACAGAACAATGTGCCAAATTACTAGATGTACCCTCCTTGAGCTGGTTTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATTACAATAGATGCTTGATTGGTTGGTTGGTTTTTGAGATATGTGTGTAAATACCTCCATGGCAGTATTGCATTGAGATAGGAATGGAAGGTGTATTGTCACCGAGA]
[+] EMBL AK100054 [CGGATGCGCCTCCTCGTCGTCGTCGTCACTCCCTCCTCCACCCCGCCATGCCTTCCCCGACCTGCTACTTGCTCCTCAACCCCACCGCCTCCAGGTCCCACCACCGTCCCCGCCTCCCCCTCCCCGCCGCCGCGCCGCCGCGCAGGCGGGTCCATGTCTCCTGCGACGCGCGGAGGACGGGCGGCGGTGGCGGTGGCGGTGGGGTGAAGCGCGAGGCCATACCTGCTGGAACCGGCAAGGCCAAGAAGCAGGTCGTGTTCTTCGACGCCGCGCCACCGGTCTCGCAGCGGGGCGGCGGCGGCGGCGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGAAGGTGGCGAGGAGGAAGGAGAACGCCGCGTTGGGGTTGGTTAGGAGGTTGACGAAGAGGACGCTGTCGCTGCTCTCCAACCTCCCGCTCGCCATCTCCGAGATGTTCGCCATTGCCGCGCTCATGGCCTTAGGCACGGTGATTGATCAAGGGGAGGCGCCGAGCTACTACTTCGAGAAGTTCCCCGAGGACAACCCGGTGTTCGGGTTCATCACGTGGAGGTGGATCCTCACTCCCGGGTTCGATCACATGTTCTCCTCGCCGGTGTTCCTCGGCCTCCTCGCGCTGCTCGCGGCGTCGCTCATGGCCTGCACTTACACCACTCAAATACCCATTGTCAAGGTTGCCAGAAGATGGTCGTTCATGCGTTCAGCAGGAAGCATCCGGAAGCAAGAATTTGCGGAGTCACTTCCCCGCGCATCCATCCAGGATTTAGGAGTTATATTGATGGGTTATGGATATGAGGTATTCACTAAGGGTCCATCTCTGTATGCTTTCAAAGGACTGGCTGGTCGGTTTGCGCCTATCGGTGTGCACATAGCTATGATTTTCATCATGGCAGGTGCCACGCTTAGCGCAACAGGGAGCTTTAAAGGATCGGTGGATGTACCCCAAGGGTTGAACTTTGTAATCGGAGATGTGATGAAACCTAAAGGAGTTCTCTCTTTTGTGCCTGATGTTTTTAATACTGAAGTCCATGTCAATCGGTTCTACATGGAGTACTATGATAGTGGAGAGGTTTCACAATTCTATAGCGATCTTTCACTTTTCGACCTTGATGGCAAAGAGGTCATGAGGAAGACTATCAAAGTGAACGACCCCTTGAGGTATGGTGGGGTCACAATCTACCAAACCGATTGGGGATTTTCAGCATTGCAAGTAAAGAAAAATGGTGAAGGTCCTTTCAATTTGGCCATGGCCCCCTTGAAATTGAATGGTGATAAGAAGTTATTTGGAACATTGTTGCCACTTGAAAACTCCGGTTCTTCCAATGTCAAAGGAATATCGATGCTTGCTCGAGATCTGCAGTCTATTGTGTTGTATGATCA AGAGGGTAAGTTTGTGGGGGTTCGTCGGCCAAGCTCAAAACTACCGATTGAAATAGATGGTAACGAAATAGTTATTGAAGATGCCATCGGTAGCACCGGTCTCGATCTTAAGACTGATCCAGGAATTCCTATTGTGTATGCTGGATTTGGTGCACTCATGTTAACGACCTGCATTAGTTATCTTTCACATTCTCAGATATGGGCATTGCAAGACGGAAGTACAGTAGTCATCGGAGGAAAGACAAATCGA GCCAA GCTTGAA TTTTCAG AAG AGATGAACAGATTAC TTGATAAGGTGCCAGAATTGATTAGCGTCAATGAGAAAAAAATCGATAGTAAACAAAGTGCTACTTAAGGAATTT TTATTTTGAGATTGGGCTGTTCGAAAAAATTTGC AAATGTTCACTTGTGGTTGAGGCT GGATTTCACAAATCATCTTCGAGGACATAAAATTATACCGTCTTTTCGGTGGAAGATAGGCTATGATTCAACTGATCCCACTCTGTATACAACCCAAAACGGCACACAGCAATATTTTGTTTATCAGACGGTCATGATACAATATACCGAGAAGAAACTGAACTGACAATGTAACTACATAACAAATTTACAACAGAACAATGTGCCAAATTACTAGATGTACCCTCCTTGAGCTGGTTTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATTACAATAGATGCTTGATTGGTTGG ]
[+] EMBL CB623157 [ TCCTCGCCGGTGTTCCTCGGCCTCCTCGCGCTGCTCGCGGCGTCGCTCATGGCCTGCACTTACACCACTCAAATCCCCATTGTCAAGGTTGCCAGAAGATGGTCGTTCATGCATTCAGCAGGAAGCATCCGGAAGCAAGAATTTGCGGAGTCACTTCCCCGCGCATCCATCCAGGATTTAGGAGTTATATTGATGGGTTATGGATATGAGGTATTCACTAAGGGTCCATCTCTGTATGCTTTCAAAGGACTGGCTGGTCGGTTTGCGCCTATCGGTGTGCACATAGCTATGATTTTCATCATGGCAGGTGCCACGCTTAGCGCAACAGGGAGCTTTAAAGGATCGGTGGATGTACCCCAAGGGTTGAACTTTGTAATCGGAGATGTGATGAAACCTAAAGGAGTTCTCTCTTTTGTGCCTGATGTTTTTAATACTGAAGTCCATGTCAATCGGTTCTACATGGAGTACTATGATAGTGGAGAGGTTTCACAATTCTATAGCGATCTTTCACTTTTCGACCTTGATGGCAAAGAGGTCATGAGGAAGACTATCAAAGTGAACGACCCCTTGAGGTATGGTGGGGTCACAATCTACCAAACCGATTGGGGATTTTCAGCATTGCAAGTAAAGAAAAATGGTGAAGGTCCTTTCAATTTGGCCATGGCCCCCTTGAAATTGAATGGTGATAAGAAGTTATTTGGAACATTGTTGCCACTTGAAAACTCCGGTTCTTCCAATGTCAAAGGAATATCGATGCTTGCTCGAGATCTGCAGTCTATTGTGT ]
[+] EMBL CB623116 [ TCCTCGCCGGTGTTCCTCGGCCTCCTCGCGCTGCTCGCGGCGTCGCTCATGGCCTGCACTTACACCACTCAAATCCCCATTGTCAAGGTTGCCAGAAGATGGTCGTTCATGCATTCAGCAGGAAGCATCCGGAAGCAAGAATTTGCGGAGTCACTTCCCCGCGCATCCATCCAGGATTTAGGAGTTATATTGATGGGTTATGGATATGAGGTATTCACTAAGGGTCCATCTCTGTATGCTTTCAAAGGACTGGCTGGTCGGTTTGCGCCTATCGGTGTGCACATAGCTATGATTTTCATCATGGCAGGTGCCACGCTTAGCGCAACAGGGAGCTTTAAAGGATCGGTGGATGTACCCCAAGGGTTGAACTTTGTAATCGGAGATGTGATGAAACCTAAAGGAGTTCTCTCTTTTGTGCCTGATGTTTTTAATACTGAAGTCCATGTCAATCGGTTCTACATGGAGTACTATGATAGTGGAGAGGTTTCACAATTCTATAGCGATCTTTCACTTTTCGACCTTGATGGCAAAGAGGTCATGAGGAAGACTATCAAAGTGAACGACCCCTTGAGGTATGGTGGGGTCACAATCTACCAAACCGATTGGGGATTTTCAGCATTGCAAGTAAAGAAAAATGGTGAAGGTCCTTTCAATTTGGCCATGGCCCCCTTGAAATTGAATGGTGATAAGAAGTTATTTGGAACATTGTTGCCACTTGAAAACTCCGGTTCTTCCAATGTCAAAGGAATATCGATGCTTGCTCGAGATCTGCAGTCTATTGTGT ]
[-] EMBL CB623158 [ GATCAGAG GGGTAAGTTTGTGGGGGTTCGTCGGCCAAGCTCAAAACTACCGATTGAAATAGATGGTAACGAAATAGTTATTGAAGATGCCATCGGTAGCACCGGTCTCGATCTTAAGACTGATCCAGGAATTCCTATTGTGTATGCTGGATTTGGTGCACTCATGTTAACGACCTGCATTAGTTATCTTTCACATTCTCAGATATGGGCATTGCAAGACGGAAGTACAGTAGTCATCGGAGGAAAGACAAATCGA GCCAA GCTTGAA TTTTCAG AAG AGATGAACAGATTAC TTGATAAGGTGCCAGAATTGATTAGCGTCAATGAGAAAAAAATCGATAGTAAACAAAGTGCTACTTAAGGAATTT TTATTTTGAGATTGGGCTGTTCGAAAAAATTTGC AAATGTTCACTTGTGGTTGAGGCT GGATTTCACAAATCATCTTCGAGGACATAAAATTATACCGTCTTTTCGGTGGAAGATAGGCTATGATTCAACTGATCCCACTCTGTATACAACCCAAAACGGCACACAGCAATATTTTGTTTATCAGACGGTCATGATACAATATACCGAGAAGAAACTGAACTGACAATGTAACTACATAACAAATTTACAACAGAACAATGTGCCAAATTACTAGATGTACCCTCCTTGAGCTGGTTTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATTACAATAGATGCTTGATTGGTTGGTTGGTTTTTGAGATATGTGTGTAAATACCTCCATGGCAGTATTGCATTGAGATAGGAATGGAAGGTGTATTGTCACCGAGA]
[-] EMBL CB623117 [ AGATGGTAACGAAATAGTTATTGAAGATGCCATCGGTAGCACCGGTCTCGATCTTAAGACTGATCCAGGAATTCCTATTGTGTATGCTGGATTTGGTGCACTCATGTTAACGACCTGCATTAGTTATCTTTCACATTCTCAGATATGGGCATTGCAAGACGGAAGTACAGTAGTCATCGGAGGAAAGACAAATCGA GCCAA GCTTGAA TTTTCAG AAG AGATGAACAGATTAC TTGATAAGGTGCCAGAATTGATTAGCGTCAATGAGAAAAAAATCGATAGTAAACAAAGTGCTACTTAAGGAATTT TTATTTTGAGATTGGGCTGTTCGAAAAAATTTGC AAATGTTCACTTGTGGTTGAGGCT GGATTTCACAAATCATCTTCGAGGACATAAAATTATACCGTCTTTTCGGTGGAAGATAGGCTATGATTCAACTGATCCCACTCTGTATACAACCCAAAACGGCACACAGCAATATTTTGTTTATCAGACGGTCATGATACAATATACCGAGAAGAAACTGAACTGACAATGTAACTACATAACAAATTTACAACAGAACAATGTGCCAAATTACTAGATGTACCCTCCTTGAGCTGGTTTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATTACAATAGATGCTTGATTGGTTGGTTGGTTTTTGAGATATGTGTGTAAATACCTCCATGGCAGTATTGCATTGAGATAGGAATGGAAGGTGTATT ]
[+] EMBL BI812115 [ GGAAAGCCAAATCGACGCCAA GCTTGAA TTTTCAGAAAG AGATGACCAGATTACGTTGATAAGGTACCAGAATTGATTAGCGTC ATGAGAAAAAAATCGATAGTAAACAAAGTGCTACTTAAGGAATTTGTTATTTTGAGATT GGCTGTTCGAAAAAATTTGCAAAATGTTCACTTGTGTTTGAGACTGGGATTTGCCCAATCATCTTCGAGGACATAAAATTAT CCGTCTTTTCGGTGGAAGATA GCTATGATTCAACTGATCCCACTCTGTATACAACCC ACGGCACACACCAATATTTT TTTATCAGAC GTCATGATAC ATATACCGAGAAGAAACTGAACTGACAATGTAACTACATTACAAATTTACAACAGAACAATGT CCCAATTACTAGATGTACCCTCCTTGAGCT GTTTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATAC AACTTATATATTAC ATAGATGCTTGATT GTTGGTTGGTTGTTGAaaaacaaaa ]
[+] EMBL BM418547 [ gg GCCAAAGGCTTGAATTTTTTCAGAAAGAAGATGAACAGATTAC TTGATAAGGTACCAGAATTGATTAGCGTCAATGAGAAAAAAATCGATAGTAAACAAAGTGCTACTTAAGGAATTT TTATTTTGAGATTGGGCTGTTCGAAAAAATTTGC AAATGTTCACTTGTGGTTGAGACT GGATTTCACAAATCATCTTCGAGGACATAAAATTATACCGTCTTTTCGGTGGAAGATAGGCTATGATTCAACTGATCCCACTCTGTATACAACCC AAACGGCACACA C ATATTTTGTTTATCAGACGGTCATGATACAATATACCGAGAAGAAACTGAACTGAC ATGTAACTACATTACAAATTNAC ACAGAAC ATGT CC AATTACTAGATGTACCCTCCTTGAGCTGGTTTTGTAACTGTTTTTGGGA CCTATTTGTAGAAAATCATAC AACTTATATATTAC ATAGATGCTTGATTGTTTGTTTGGTTaaaaa ]
consensusID : consensus_12032#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence
[AAACCCCGGTTTTTTTTTTAAAGGTTTTCCCGGAATCCCTTGGGGGTCGGGGGTGGGGCCCCCCAATTACCCCCCCCATAATTTATTTTCCCTTTTAAAATGGGGCCTCACAGGGGAAGTCCTTTTTTTGGGGGAAAACCAATCGAGCCAAGTTAATTTTTAAAAAAATGACCAGATTCTTTAAAGGGTCCAAAATTGTTTCCGCCTAATAAAAAAAAATTTGTTTGTAACCAAGGGGTTCTTAAGGAAATTTTATTTTGAGATGGGCTGTCGAAAAAATTGCCCAAATGGTTCCCCTGGTGGTTGAGCTTGGATTTCCCAAATCATCTTCGAGGCCATAAAATATCCGTCTTCGGTGAAGATAGGTATGATCACTGATCCACTCGTATCAACCAAAACGGCCACAGCATATTTGTTATCAGACGGGGTCCATGATATCAATTATTTACCGCGAGAAAAGAAACTGAACTGACAATGTAACTACATTACAAATTTACAACAGAACAATGTGCCAAATTACTAGATGTACCCTCCTTGAGCTGGTTTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATTACAATAGATGCTTGATTGGTTGGTTGGTTGTTGAAAAAAAAAAAAA]
[-] EMBL CA761761 [AAACCCCGGTTTTTTTTTTAAAGGTTTTCCCGGAATCCCTTGGGGGTCGGGGGTGGGGCCCCCCAATTACCCCCCCCATAATTTATTTTCCCTTTTAAAATGGGGCCTCACAGGGGAAGTCCTTTTTTTGGGGGAAAACCAATCGAGCCAAGTTAATTTTTAAAAAAATGACCAGATTCTTTAAAGGGTCCAAAATTGTTTCCGCCTAATAAAAAAAAATTTGTTTGTAACCAAGGGGTTCTTAAGGAAATTTTATTTTGAGATGGGCTGTCGAAAAAATTGCCCAAATGGTTCCCCTGGTGGTTGAGCTTGGATTTCCCAAATCATCTTCGAGGCCATAAAATATCCGTCTTCGGTGAAGATAGGTATGATCACTGATCCACTCGTATCAACCAAAACGGCCACAGCATATTTGTTATCAGACGGGGTCCATGATATCAATTATTTACCGCGAGAAAAGAAACTGAACTGACAATGTAACTACATTACAAATTTACAACAGAACAATGTGCCAAATTACTAGATGTACCCTCCTTGAGCTGGTTTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATTACAATAGATGCTTGATTGGTTGGTTGGTTGTTGAAAAAAAAAAAAA]
consensusID : consensus_12032#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 617 fasta sequence
[AGATCCCATCGGTAGCACCCGGTCTCGATCTTAAGACTGATCCAGGAATTCCTATTGTGTATGCTGGGTTTGGTGCACTCATGTTCAACGACCTGCATTAGTTATCTTTCACATTCTCAGATATGGGCATTGCNAGACGGCAAGTACTAGTAGTCATCGGTAGGCAAAGTACCAATCGTAGCCNTAGCTTGTAATTTTCAGAAGAGCATGATACCAGATTACTTGATAACGGTACCCAGATATTGATTCAGCGTCCAATGAGAAACAAATCGATAGTAAACCCAAGTGCTACGTTAAGGAAATTTTTAATTTTGAGATTGGGCTGTTTCGAAAAAATTTGCACAAATGTTCACCTTGTGGATTGAGACTGGATTTCACCACAATCACTCTTCGAGGACATAATAACTTATCACCGTCTGTTTCGAGTAGGAAGATAGGCTATGGATGTCAACTGATCCCAGCTCTCGTATGACAACCCCATCACGGGCACACTAGCAATATTTTGTTTGATCAGCCCGGTCATGATACCAATATACCGAGAAGAAACTGACCTGACAATGTCACTACATTACCAAATTTACACAGAACCACTGTGCCCAAATTACTAAAAAAAAAAA]
[+] EMBL BQ907211 [AGATCCCATCGGTAGCACCCGGTCTCGATCTTAAGACTGATCCAGGAATTCCTATTGTGTATGCTGGGTTTGGTGCACTCATGTTCAACGACCTGCATTAGTTATCTTTCACATTCTCAGATATGGGCATTGCNAGACGGCAAGTACTAGTAGTCATCGGTAGGCAAAGTACCAATCGTAGCCNTAGCTTGTAATTTTCAGAAGAGCATGATACCAGATTACTTGATAACGGTACCCAGATATTGATTCAGCGTCCAATGAGAAACAAATCGATAGTAAACCCAAGTGCTACGTTAAGGAAATTTTTAATTTTGAGATTGGGCTGTTTCGAAAAAATTTGCACAAATGTTCACCTTGTGGATTGAGACTGGATTTCACCACAATCACTCTTCGAGGACATAATAACTTATCACCGTCTGTTTCGAGTAGGAAGATAGGCTATGGATGTCAACTGATCCCAGCTCTCGTATGACAACCCCATCACGGGCACACTAGCAATATTTTGTTTGATCAGCCCGGTCATGATACCAATATACCGAGAAGAAACTGACCTGACAATGTCACTACATTACCAAATTTACACAGAACCACTGTGCCCAAATTACTAAAAAAAAAAA]
consensusID : consensus_12032#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 529 fasta sequence
[AGGGACGAGACAAGGGGGGGCATTGCAAGACGGAAGTACAGTAGTCCTCGGAGAAAAGACAAATCGAGCCAAGCTTGAATTTTCAGAAGAGATGAACAGATTACTTGATAAGGTACCAGAATTGATTAGCGTCAATGAGAAAAAAATCGATAGTAAACAAAGTGCTACTTAAGGAATTTTTATTTTGAGATTGGGCTGTTCGAAAAAATTTGCAAATGTTCACTTGTGGTTGAGACTGGATTTCACAAATCATCTTCGAGGACATAAAATTATACCGTCTTTTCGGTGGAAGATAGGCTATGATTCAACTGATCCCACTCTGTATACAACCCAAAACGGCACACAGCAATATTTTGTTTATCAGACGGTCATGATACAATATACCGAGAAGAAACTGAACTGACAATGTAACTACATTACAAATTTACAACAGAACAATGTGCCAAATTACTAGATGTACCCTCCTTGAGCTGGTCTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATT]
[+] EMBL CA765067 [AGGGACGAGACAAGGGGGGGCATTGCAAGACGGAAGTACAGTAGTCCTCGGAGAAAAGACAAATCGAGCCAAGCTTGAATTTTCAGAAGAGATGAACAGATTACTTGATAAGGTACCAGAATTGATTAGCGTCAATGAGAAAAAAATCGATAGTAAACAAAGTGCTACTTAAGGAATTTTTATTTTGAGATTGGGCTGTTCGAAAAAATTTGCAAATGTTCACTTGTGGTTGAGACTGGATTTCACAAATCATCTTCGAGGACATAAAATTATACCGTCTTTTCGGTGGAAGATAGGCTATGATTCAACTGATCCCACTCTGTATACAACCCAAAACGGCACACAGCAATATTTTGTTTATCAGACGGTCATGATACAATATACCGAGAAGAAACTGAACTGACAATGTAACTACATTACAAATTTACAACAGAACAATGTGCCAAATTACTAGATGTACCCTCCTTGAGCTGGTCTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 CGGATGCGCCTCCTCGTCGTCGTCGTCACTCCCTCCTCCACCCCGCCATGCCTTCCCCGA 60
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 CCTGCTACTTGCTCCTCAACCCCACCGCCTCCAGGTCCCACCACCGTCCCCGCCTCCCCC 120
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 TCCCCGCCGCCGCGCCGCCGCGCAGGCGGGTCCATGTCTCCTGCGACGCGCGGAGGACGG 180
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 GCGGCGGTGGCGGTGGCGGTGGGGTGAAGCGCGAGGCCATACCTGCTGGAACCGGCAAGG 240
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 CCAAGAAGCAGGTCGTGTTCTTCGACGCCGCGCCACCGGTCTCGCAGCGGGGCGGCGGCG 300
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 GCGGCGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGAAGGTGGCGAGGAGGAAGGAGA 360
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 ACGCCGCGTTGGGGTTGGTTAGGAGGTTGACGAAGAGGACGCTGTCGCTGCTCTCCAACC 420
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 TCCCGCTCGCCATCTCCGAGATGTTCGCCATTGCCGCGCTCATGGCCTTAGGCACGGTGA 480
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 TTGATCAAGGGGAGGCGCCGAGCTACTACTTCGAGAAGTTCCCCGAGGACAACCCGGTGT 540
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 TCGGGTTCATCACGTGGAGGTGGATCCTCACTCCCGGGTTCGATCACATGTTCTCCTCGC 600
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 CGGTGTTCCTCGGCCTCCTCGCGCTGCTCGCGGCGTCGCTCATGGCCTGCACTTACACCA 660
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 CTCAAATCCCCATTGTCAAGGTTGCCAGAAGATGGTCGTTCATGCATTCAGCAGGAAGCA 720
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 TCCGGAAGCAAGAATTTGCGGAGTCACTTCCCCGCGCATCCATCCAGGATTTAGGAGTTA 780
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 TATTGATGGGTTATGGATATGAGGTATTCACTAAGGGTCCATCTCTGTATGCTTTCAAAG 840
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 GACTGGCTGGTCGGTTTGCGCCTATCGGTGTGCACATAGCTATGATTTTCATCATGGCAG 900
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 GTGCCACGCTTAGCGCAACAGGGAGCTTTAAAGGATCGGTGGATGTACCCCAAGGGTTGA 960
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 ACTTTGTAATCGGAGATGTGATGAAACCTAAAGGAGTTCTCTCTTTTGTGCCTGATGTTT 1020
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 TTAATACTGAAGTCCATGTCAATCGGTTCTACATGGAGTACTATGATAGTGGAGAGGTTT 1080
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 CACAATTCTATAGCGATCTTTCACTTTTCGACCTTGATGGCAAAGAGGTCATGAGGAAGA 1140
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 CTATCAAAGTGAACGACCCCTTGAGGTATGGTGGGGTCACAATCTACCAAACCGATTGGG 1200
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 GATTTTCAGCATTGCAAGTAAAGAAAAATGGTGAAGGTCCTTTCAATTTGGCCATGGCCC 1260
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 CCTTGAAATTGAATGGTGATAAGAAGTTATTTGGAACATTGTTGCCACTTGAAAACTCCG 1320
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 GTTCTTCCAATGTCAAAGGAATATCGATGCTTGCTCGAGATCTGCAGTCTATTGTGTTGT 1380
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------------------------
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 ATGATCAAGAGGGTAAGTTTGTGGGGGTTCGTCGGCCAAGCTCAAAACTACCGATTGAAA 1440
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 --------------------------------------AAACCCCGGTTTTTTTTTTAAA 22
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 TAGATGGTAACGAAATAGTTATTGAAGATGCCATCGGTAGCACC-GGTCTCGATCTTAAG 1499
consensus_12032#2 -------------------------AGATCCCATCGGTAGCACCCGGTCTCGATCTTAAG 35
consensus_12032#1 GGTTTTCCCGGAATCCCT----TGGGGGTCGGGGGTGGGGCCCCCCAATT--ACCCCCCC 76
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 ACTGATCCAGGAATTCCTATTGTGTATGCTGGATTTGGTGCACTCATGTT-AACGACCTG 1558
consensus_12032#2 ACTGATCCAGGAATTCCTATTGTGTATGCTGGGTTTGGTGCACTCATGTTCAACGACCTG 95
consensus_12032#1 CATAATTTATTTTCC---CTTTTAAAATGGGGCCTCACAGG--GG-AAGTCCT----TTT 126
consensus_12032#3 ---------AGGGAC---GAGACAAGGGGGGGCATTGCAAGACGG-AAGTACAGTAGTCC 47
consensus_12032#0 CATTAGTTATCTTTCACATTCTCAGATATGGGCATTGCAAGACGG-AAGTAC-AGTAGTC 1616
consensus_12032#2 CATTAGTTATCTTTCACATTCTCAGATATGGGCATTGCNAGACGGCAAGTACTAGTAGTC 155
* * **** * * * ** **** *
consensus_12032#1 TTTGGGGG----AAAACCAATCG-AGCCA-AGTT---AATTTTTAAAAAA--ATGAC--C 173
consensus_12032#3 TCGGAGAA----AAGACAAATCG-AGCCA-AGCTTG-AATTTTCAGAAGAG-ATGAA--C 97
consensus_12032#0 ATCGGAGG---AAAGACAAATCG-AGCCA-AGCTTG-AATTTTCAGAAGAG-ATGAA--C 1667
consensus_12032#2 ATCGGTAGGCAAAGTACCAATCGTAGCCNTAGCTTGTAATTTTCAGAAGAGCATGATACC 215
* * ** ***** **** ** * ****** * ** * **** *
consensus_12032#1 AGATTCTTTA--AAGGGT--CCAAA-ATTGTTTC--CGCCTAATAAAAAAAAATTTGTTT 226
consensus_12032#3 AGATTACTTGATAAGGTA--CCAGA-ATTGATTA--GCGTCAATGAGAAAAAAATCGATA 152
consensus_12032#0 AGATTACTTGATAA-GGTGCC-AGA-ATTGATT-AGCGTC-AATGAGAAAAAAATCGATA 1722
consensus_12032#2 AGATTACTTGATAACGGTACCCAGATATTGATTCAGCGTCCAATGAGAAACAAATCGATA 275
***** ** ** * * * * **** ** *** * *** ** * * *
consensus_12032#1 GTAACCA-AGGGGTT-C-TTAAGGAAATTTT--ATTTTGAGAT-GGGCTGTC---GAAAA 277
consensus_12032#3 GTAAACA-AAGTGCTAC-TTAAGGAATTTTT--ATTTTGAGATTGGGCTGTT---CGAAA 205
consensus_12032#0 GTAAACA-AAGTGCTAC-TTAAGGAATTTTT--ATTTTGAGATTGGGCTGTT-CGAAAAA 1777
consensus_12032#2 GTAAACCCAAGTGCTACGTTAAGGAAATTTTTAATTTTGAGATTGGGCTGTTTCGAAAAA 335
**** * * * * * * ******** **** ********** ******* ***
consensus_12032#1 AATTGCCCAAATGGTTCCCCTGGTGG-TTGAGCTTGGATTTCCCAA--ATCA-TCTTCGA 333
consensus_12032#3 AAATTTGCAAATG--TTCACTTGTGG-TTGAGACTGGATTTCACAA--ATCA-TCTTCGA 259
consensus_12032#0 ATTTGCA--AATG-TTCAC-TTGTGG-TTGAGGCTGGATTTCACAA--ATCA-TCTTCGA 1829
consensus_12032#2 ATTTGCACAAATG-TTCACCTTGTGGATTGAGACTGGATTTCACCACAATCACTCTTCGA 394
* * **** * * **** ***** ******** * * **** *******
consensus_12032#1 GGCCATAAAA--T-AT--CCGTCT--TCGGTG----AAGATAGG-TATGATC----ACTG 377
consensus_12032#3 GGACATAAAA--TTAT-ACCGTCTTTTCGGTGG---AAGATAGGCTATGATTC--AACTG 311
consensus_12032#0 GGACATAAAA--TTAT-ACCGTCT-TTTCGGT--GGAAGATAGGCTATGATT--CAACTG 1881
consensus_12032#2 GGACATAATAACTTATCACCGTCTGTTTCGAGTAGGAAGATAGGCTATGGATGTCAACTG 454
** ***** * * ** ****** * * ******** **** ****
consensus_12032#1 ATCC-ACTC---GTAT--CAACCAAA--AC-GGC-CAC-AGCA-TATTT--GTT-ATCAG 422
consensus_12032#3 ATCCCACTCTGTATAC--AACCCAAA--AC-GGCACAC-AGCAATATTTTGTTT-ATCAG 364
consensus_12032#0 ATCCCA-CTCT-GTAT-ACAACCCAA--AACGGCACAC-AGCAATATTTTGTTT-ATCAG 1934
consensus_12032#2 ATCCCAGCTCTCGTATGACAACCCCATCACGGGCACACTAGCAATATTTTGTTTGATCAG 514
**** * ** * ** * * *** *** **** ***** ** *****
consensus_12032#1 ACGGGGTCCATGATATCAATTATTTACCGCGAGAAAAGAAACTGAACTGACAATGTAACT 482
consensus_12032#3 ACGG---TCATGATACAA----TATACCG----AGAAGAAACTGAACTGACAATGTAACT 413
consensus_12032#0 AC-GG--TCATGATAC-A---ATATACCG----AGAAGAAACTGAACTGACAATGTAACT 1983
consensus_12032#2 CCCGG--TCATGATACCA---ATATACCG----AGAAGAAACTGACCTGACAATGTCACT 565
* * ******* * * ***** * ********** ********** ***
consensus_12032#1 ACATTAC-AAATTTACAACAGAACAATGTGCC-AAATTACTAGATGTACCCTCCTTGAGC 540
consensus_12032#3 ACATTAC-AAATTTACAACAGAACAATGTGCC-AAATTACTAGATGTACCCTCCTTGAGC 471
consensus_12032#0 ACATAAC-AAATTTACAACAGAACAATGTGCC-AAATTACTAGATGTACCCTCCTTGAGC 2041
consensus_12032#2 ACATTACCAAATTTACACAGAACCACTGTGCCCAAATTACTAAAAAAAAAAA-------- 617
**** ** ********* * ** ****** ********* * *
consensus_12032#1 TGGTTTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATTAC 600
consensus_12032#3 TGGTCTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATT-- 529
consensus_12032#0 TGGTTTTGTAACTGTTTTTGGGAGCCTATTTGTAGAAAATCATACAAACTTATATATTAC 2101
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 AATAGATGCTTGATTGGTTGGTTGGTTGTTGAAAAAAAAAAAAA---------------- 644
consensus_12032#3 ------------------------------------------------------------
consensus_12032#0 AATAGATGCTTGATTGGTTGGTTGGTTTTTGAGATATGTGTGTAAATACCTCCATGGCAG 2161
consensus_12032#2 ------------------------------------------------------------
consensus_12032#1 ------------------------------------------
consensus_12032#3 ------------------------------------------
consensus_12032#0 TATTGCATTGAGATAGGAATGGAAGGTGTATTGTCACCGAGA 2203
consensus_12032#2 ------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||